Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012300 Klebsiella quasipneumoniae strain HKUOPLC chromosome, complete genome 5 crisprs csa3,cas3,DEDDh,DinG,WYL,RT 0 1 5 0

Results visualization

1. NZ_CP012300
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012300_1 149257-149368 Unclear NA
1 spacers
cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012300_2 1401376-1401464 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012300_3 1632655-1632806 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012300_4 4391678-4391802 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012300_5 4629563-4629680 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012300_4 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder 4391721-4391759 39 NZ_KU295136 Escherichia coli strain BK28610 plasmid pBK28610, complete sequence 14121-14159 8 0.795
NZ_CP012300_4 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder 4391721-4391759 39 NZ_CP010366 Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-13.828kb, complete sequence 4109-4147 8 0.795
NZ_CP012300_4 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder 4391721-4391759 39 CP052361 Klebsiella pneumoniae strain D16KP0144 plasmid pD16KP0144-5, complete sequence 5211-5249 18 0.538
NZ_CP012300_4 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder 4391721-4391759 39 CP052429 Klebsiella pneumoniae strain C16KP0129 plasmid pC16KP0129-2, complete sequence 1930-1968 18 0.538

1. spacer 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder matches to NZ_KU295136 (Escherichia coli strain BK28610 plasmid pBK28610, complete sequence) position: , mismatch: 8, identity: 0.795

--ggtaaaagtaaaaaggcaacgcaagttgccttttttagg	CRISPR spacer
cggctgaaa--aaaaaggcaccgcaaggtgccttttttaca	Protospacer
  * *.***  ********* ****** *********** .

2. spacer 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder matches to NZ_CP010366 (Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-13.828kb, complete sequence) position: , mismatch: 8, identity: 0.795

--ggtaaaagtaaaaaggcaacgcaagttgccttttttagg	CRISPR spacer
cggctgaaa--aaaaaggcaccgcaaggtgccttttttaca	Protospacer
  * *.***  ********* ****** *********** .

3. spacer 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder matches to CP052361 (Klebsiella pneumoniae strain D16KP0144 plasmid pD16KP0144-5, complete sequence) position: , mismatch: 18, identity: 0.538

ggtaaaagtaaaaaggcaacgcaagttgccttttttagg-----	CRISPR spacer
-----tgtaaaaaaggcaccttgcggtgcctttttttcagccgg	Protospacer
      .  ********* * .. * **********  .     

4. spacer 4.1|4391721|39|NZ_CP012300|CRISPRCasFinder matches to CP052429 (Klebsiella pneumoniae strain C16KP0129 plasmid pC16KP0129-2, complete sequence) position: , mismatch: 18, identity: 0.538

ggtaaaagtaaaaaggcaacgcaagttgccttttttagg-----	CRISPR spacer
-----tgtaaaaaaggcaccttgcggtgcctttttttcagccgg	Protospacer
      .  ********* * .. * **********  .     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1674067 : 1680990 6 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_2 1722706 : 1734857 11 Enterobacteria_phage(25.0%) NA NA
DBSCAN-SWA_3 2628257 : 2637670 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_4 2834601 : 2891308 67 Escherichia_phage(21.74%) holin,bacteriocin,terminase,tail,tRNA,lysis NA
DBSCAN-SWA_5 3364730 : 3374191 8 Brazilian_cedratvirus(16.67%) protease,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage