Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010891 Staphylococcus aureus strain SA564 plasmid pSA564, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP010890 Staphylococcus aureus strain SA564 chromosome, complete genome 12 crisprs cas3,DEDDh,DinG,csa3,RT,WYL 10 3 8 2

Results visualization

1. NZ_CP010890
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_1 135634-135718 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_2 375423-375524 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_3 732301-732383 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_4 773248-773326 Unclear NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_5 778703-778972 Unclear NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_6 837903-837981 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_7 1624998-1625082 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_8 1659428-1659575 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_9 2052793-2052874 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_10 2181473-2181553 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_11 2193794-2193879 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010890_12 2301715-2301795 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP010890_1 1.1|135660|33|NZ_CP010890|CRISPRCasFinder 135660-135692 33 NZ_CP010890.1 1355042-1355074 0 1.0
NZ_CP010890_4 4.1|773272|31|NZ_CP010890|CRISPRCasFinder 773272-773302 31 NZ_CP010890.1 258832-258862 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 135621-135642 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 258757-258778 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 258867-258888 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 605315-605336 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 731342-731363 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1354945-1354966 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1443497-1443518 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1625074-1625095 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1639608-1639629 0 1.0
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1950272-1950293 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 135621-135642 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 258757-258778 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 258867-258888 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 605315-605336 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 731342-731363 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1354945-1354966 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1443497-1443518 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1625074-1625095 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1639608-1639629 0 1.0
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1950272-1950293 0 1.0
NZ_CP010890_9 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder 2052817-2052850 34 NZ_CP010890.1 773247-773280 0 1.0
NZ_CP010890_9 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder 2052817-2052850 34 NZ_CP010890.1 1143302-1143335 0 1.0
NZ_CP010890_4 4.1|773272|31|NZ_CP010890|CRISPRCasFinder 773272-773302 31 NZ_CP010890.1 258777-258807 1 0.968
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 950444-950465 1 0.955
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1659335-1659356 1 0.955
NZ_CP010890_5 5.1|778739|22|NZ_CP010890|CRT 778739-778760 22 NZ_CP010890.1 1659568-1659589 1 0.955
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 732292-732314 1 0.957
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 732570-732592 1 0.957
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 1355061-1355083 1 0.957
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 1950330-1950352 1 0.957
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 2290886-2290908 1 0.957
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 950444-950465 1 0.955
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1659335-1659356 1 0.955
NZ_CP010890_5 5.3|778856|22|NZ_CP010890|CRT 778856-778877 22 NZ_CP010890.1 1659568-1659589 1 0.955
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 732292-732314 1 0.957
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 732570-732592 1 0.957
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 1355061-1355083 1 0.957
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 1950330-1950352 1 0.957
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 2290886-2290908 1 0.957
NZ_CP010890_7 7.1|1625024|33|NZ_CP010890|CRISPRCasFinder 1625024-1625056 33 NZ_CP010890.1 1355042-1355074 1 0.97
NZ_CP010890_9 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder 2052817-2052850 34 NZ_CP010890.1 1745021-1745054 1 0.971
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 785991-786021 1 0.968
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 786047-786077 1 0.968
NZ_CP010890_1 1.1|135660|33|NZ_CP010890|CRISPRCasFinder 135660-135692 33 NZ_CP010890.1 1443389-1443421 2 0.939
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 837613-837635 2 0.913
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 1443380-1443402 2 0.913
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 NZ_CP010890.1 2052874-2052896 2 0.913
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 837613-837635 2 0.913
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 1443380-1443402 2 0.913
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 NZ_CP010890.1 2052874-2052896 2 0.913
NZ_CP010890_8 8.2|1659535|22|NZ_CP010890|PILER-CR 1659535-1659556 22 NZ_CP010890.1 1143424-1143445 2 0.909
NZ_CP010890_8 8.2|1659535|22|NZ_CP010890|PILER-CR 1659535-1659556 22 NZ_CP010890.1 2052762-2052783 2 0.909
NZ_CP010890_8 8.2|1659535|22|NZ_CP010890|PILER-CR 1659535-1659556 22 NZ_CP010890.1 2052879-2052900 2 0.909
NZ_CP010890_9 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder 2052817-2052850 34 NZ_CP010890.1 1359415-1359448 2 0.941
NZ_CP010890_9 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder 2052817-2052850 34 NZ_CP010890.1 2742826-2742859 2 0.941
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 36973-37003 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 335165-335195 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 605370-605400 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 786103-786133 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 837877-837907 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1148903-1148933 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1355000-1355030 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1443433-1443463 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1443549-1443579 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1639662-1639692 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 1948924-1948954 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 2290939-2290969 2 0.935
NZ_CP010890_12 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder 2301740-2301770 31 NZ_CP010890.1 2467944-2467974 2 0.935

1. spacer 1.1|135660|33|NZ_CP010890|CRISPRCasFinder matches to position: 1355042-1355074, mismatch: 0, identity: 1.0

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
*********************************

2. spacer 4.1|773272|31|NZ_CP010890|CRISPRCasFinder matches to position: 258832-258862, mismatch: 0, identity: 1.0

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattgcc	Protospacer
*******************************

3. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 135621-135642, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 258757-258778, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 258867-258888, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 605315-605336, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 731342-731363, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1354945-1354966, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1443497-1443518, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1625074-1625095, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1639608-1639629, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1950272-1950293, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 135621-135642, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 258757-258778, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 258867-258888, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 605315-605336, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 731342-731363, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1354945-1354966, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1443497-1443518, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1625074-1625095, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1639608-1639629, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

22. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1950272-1950293, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

23. spacer 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder matches to position: 773247-773280, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

24. spacer 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder matches to position: 1143302-1143335, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

25. spacer 4.1|773272|31|NZ_CP010890|CRISPRCasFinder matches to position: 258777-258807, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattacc	Protospacer
****************************.**

26. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 950444-950465, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

27. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1659335-1659356, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

28. spacer 5.1|778739|22|NZ_CP010890|CRT matches to position: 1659568-1659589, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

29. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 732292-732314, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

30. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 732570-732592, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 1355061-1355083, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 1950330-1950352, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 2290886-2290908, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 950444-950465, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

35. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1659335-1659356, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

36. spacer 5.3|778856|22|NZ_CP010890|CRT matches to position: 1659568-1659589, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

37. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 732292-732314, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

38. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 732570-732592, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 1355061-1355083, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 1950330-1950352, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

41. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 2290886-2290908, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

42. spacer 7.1|1625024|33|NZ_CP010890|CRISPRCasFinder matches to position: 1355042-1355074, mismatch: 1, identity: 0.97

attgggaatccaatttctctgtgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
******************** ************

43. spacer 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder matches to position: 1745021-1745054, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttgtgttgg	Protospacer
*************************.********

44. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 785991-786021, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

45. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 786047-786077, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

46. spacer 1.1|135660|33|NZ_CP010890|CRISPRCasFinder matches to position: 1443389-1443421, mismatch: 2, identity: 0.939

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tggaccccaacaaagagaaattgtattcccaat	Protospacer
***.******************* *********

47. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 837613-837635, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgagaatccaat	Protospacer
*************..********

48. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 1443380-1443402, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

49. spacer 5.2|778797|23|NZ_CP010890|CRT matches to position: 2052874-2052896, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

50. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 837613-837635, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgagaatccaat	Protospacer
*************..********

51. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 1443380-1443402, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

52. spacer 5.4|778914|23|NZ_CP010890|CRT matches to position: 2052874-2052896, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

53. spacer 8.2|1659535|22|NZ_CP010890|PILER-CR matches to position: 1143424-1143445, mismatch: 2, identity: 0.909

tgaaattggggttccaatttct	CRISPR spacer
tgaaattggtgatccaatttct	Protospacer
********* * **********

54. spacer 8.2|1659535|22|NZ_CP010890|PILER-CR matches to position: 2052762-2052783, mismatch: 2, identity: 0.909

tgaaattggggttccaatttct	CRISPR spacer
tgaaattgggaatccaatttct	Protospacer
**********. **********

55. spacer 8.2|1659535|22|NZ_CP010890|PILER-CR matches to position: 2052879-2052900, mismatch: 2, identity: 0.909

tgaaattggggttccaatttct	CRISPR spacer
tgaaattgggaatccaatttct	Protospacer
**********. **********

56. spacer 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder matches to position: 1359415-1359448, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtggaatttcttatcgaaattctctgtgttgg	Protospacer
****.********* *******************

57. spacer 9.1|2052817|34|NZ_CP010890|CRISPRCasFinder matches to position: 2742826-2742859, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttttgttgg	Protospacer
*************************.* ******

58. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 36973-37003, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

59. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 335165-335195, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

60. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 605370-605400, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 786103-786133, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

62. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 837877-837907, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

63. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1148903-1148933, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

64. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1355000-1355030, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

65. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1443433-1443463, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

66. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1443549-1443579, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

67. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1639662-1639692, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

68. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 1948924-1948954, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

69. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 2290939-2290969, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

70. spacer 12.1|2301740|31|NZ_CP010890|CRISPRCasFinder matches to position: 2467944-2467974, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP010890_5 5.2|778797|23|NZ_CP010890|CRT 778797-778819 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP010890_5 5.4|778914|23|NZ_CP010890|CRT 778914-778936 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP010890_11 11.1|2193820|34|NZ_CP010890|CRISPRCasFinder 2193820-2193853 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP010890_11 11.1|2193820|34|NZ_CP010890|CRISPRCasFinder 2193820-2193853 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 5.2|778797|23|NZ_CP010890|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 5.2|778797|23|NZ_CP010890|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 5.4|778914|23|NZ_CP010890|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 5.4|778914|23|NZ_CP010890|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 11.1|2193820|34|NZ_CP010890|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 11.1|2193820|34|NZ_CP010890|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 710420 : 718241 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 730212 : 744853 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 795817 : 814181 24 Staphylococcus_phage(72.22%) coat,terminase,integrase attL 797189:797204|attR 804588:804603
DBSCAN-SWA_4 845943 : 901383 75 Staphylococcus_phage(87.3%) head,capsid,transposase,holin,terminase,integrase,tail,portal,plate attL 841259:841274|attR 898270:898285
DBSCAN-SWA_5 1047822 : 1056295 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1674667 : 1683710 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_7 1807141 : 1869350 59 Staphylococcus_phage(95.65%) tRNA,protease NA
DBSCAN-SWA_8 1963169 : 2057757 113 Staphylococcus_phage(86.84%) head,capsid,holin,terminase,integrase,tail,portal,tRNA,protease attL 1959606:1959630|attR 2060043:2060067
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP010890.1|WP_000681968.1|1998928_1999105_-|hypothetical-protein 1998928_1999105_- 58 aa aa NA NA NA 1963169-2057757 yes
NZ_CP010890.1|WP_000990056.1|1999347_1999446_-|hypothetical-protein 1999347_1999446_- 32 aa aa NA NA NA 1963169-2057757 yes