CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP010411	Bifidobacterium longum subsp. infantis strain BT1 chromosome, complete genome	8 crisprs	cas14j,csa3,c2c9_V-U4,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	0	21	1	0

1. NZ_CP010411

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010411_1

• CRISPR_ID: NZ_CP010411_1
• CRISPR_location: 336244-336329
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP010411_1

Consensus_repeat	Method
GGCCCTGAGCGTGCGGGCGCGGA	CRISPRCasFinder

spacers of NZ_CP010411_1

>1.1|336267|40|NZ_CP010411|CRISPRCasFinder
ATCGCGTTTGAAGCGGCATTGCCGCCATTGGCACCGGCGC

CRISPR arrays and Neighbor proteins around NZ_CP010411_1

CRISPR arrays

The CRISPR arrays of NZ_CP010411_1

>merge|NZ_CP010411|1|336244-336329|CRISPRCasFinder
GGCCCTGAGCGTGCGGGCGCGGAATCGCGTTTGAAGCGGCATTGCCGCCATTGGCACCGGCGCCGCCCTGAGCGTGCGGGCGCGGA

>NZ_CP010411|1|1|336244-336329|CRISPRCasFinder
GGCCCTGAGCGTGCGGGCGCGGA	ATCGCGTTTGAAGCGGCATTGCCGCCATTGGCACCGGCGC
CGCCCTGAGCGTGCGGGCGCGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_060620112.1|328610_329243_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_004268639.1|328329_328419_-|AURKAIP1/COX24-domain-containing-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_005323424.1|326000_327179_-|IS256-like-element-IS1249-family-transposase	unknown	unknown	gnl|CDD|371130
NZ_CP010411.1|WP_060620119.1|338442_339171_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620113.1|329370_330909_+|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
NZ_CP010411.1|WP_012578451.1|327477_328176_+|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NZ_CP010411.1|WP_060620124.1|346176_348357_-|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl|CDD|379601
NZ_CP010411.1|WP_060620110.1|322804_324448_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|181196
NZ_CP010411.1|WP_060620126.1|349568_350090_-|50S-ribosomal-protein-L17	unknown	unknown	gnl|CDD|235522
NZ_CP010411.1|WP_060620125.1|348577_349489_+|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl|CDD|211337
NZ_CP010411.1|WP_060620122.1|341592_342570_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP010411.1|WP_060620121.1|340096_341479_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP010411.1|WP_082247958.1|332145_333309_-|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl|CDD|235113
NZ_CP010411.1|WP_060620118.1|337167_338235_-|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl|CDD|237061
NZ_CP010411.1|WP_032745526.1|343899_344019_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_164997084.1|325063_325954_+|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
NZ_CP010411.1|WP_060620114.1|330923_332048_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	unknown	unknown	gnl|CDD|235536
NZ_CP010411.1|WP_060620123.1|342569_343481_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP010411.1|WP_060620116.1|333310_333787_-|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl|CDD|234787
NZ_CP010411.1|WP_012578462.1|345171_345972_-|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_060620124.1|346176_348357_-|circularly-permuted-type-2-ATP-grasp-protein	gnl|CDD|379601	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2. Circularly permuted ATP-grasp prototyped by Roseiflexus RoseRS_2616 that is associated in gene neighborhoods with a GCS2-like COOH-NH2 ligase, alpha/beta hydrolase fold peptidase, GAT-II -like amidohydrolase, and M20 peptidase. Members of this family are predicted to be involved in the biosynthesis of small peptides.	0
NZ_CP010411.1|WP_005323424.1|326000_327179_-|IS256-like-element-IS1249-family-transposase	gnl|CDD|371130	pfam10551, MULE, MULE transposase domain. This domain was identified by Babu and colleagues.	0.00142181
NZ_CP010411.1|WP_060620113.1|329370_330909_+|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP010411.1|WP_012578451.1|327477_328176_+|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	5.164e-120
NZ_CP010411.1|WP_060620110.1|322804_324448_+|FAD-dependent-oxidoreductase	gnl|CDD|181196	PRK08010, PRK08010, pyridine nucleotide-disulfide oxidoreductase; Provisional.	1.43545e-74
NZ_CP010411.1|WP_060620126.1|349568_350090_-|50S-ribosomal-protein-L17	gnl|CDD|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	1.80085e-56
NZ_CP010411.1|WP_060620125.1|348577_349489_+|tRNA-pseudouridine(38-40)-synthase-TruA	gnl|CDD|211337	cd02570, PseudoU_synth_EcTruA, Eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1). Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E. coli TruA makes psi38/39 and/or 40 in tRNA. psi38 and psi39 in tRNAs are highly phylogenetically conserved. P. aeruginosa truA is required for induction of type III secretory genes and may act through modifying tRNAs critical for the expression of type III genes or their regulators.	3.25242e-94
NZ_CP010411.1|WP_060620122.1|341592_342570_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.25195e-71
NZ_CP010411.1|WP_060620121.1|340096_341479_-|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.86101e-36
NZ_CP010411.1|WP_082247958.1|332145_333309_-|tRNA-pseudouridine(55)-synthase-TruB	gnl|CDD|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	4.94338e-102
NZ_CP010411.1|WP_060620118.1|337167_338235_-|transcription-termination/antitermination-protein-NusA	gnl|CDD|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	2.52589e-150
NZ_CP010411.1|WP_164997084.1|325063_325954_+|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	1.81205e-61
NZ_CP010411.1|WP_060620114.1|330923_332048_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	gnl|CDD|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.01269e-82
NZ_CP010411.1|WP_060620123.1|342569_343481_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.38808e-61
NZ_CP010411.1|WP_060620116.1|333310_333787_-|30S-ribosome-binding-factor-RbfA	gnl|CDD|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.46544e-44
NZ_CP010411.1|WP_012578462.1|345171_345972_-|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	1.27604e-29

Protein sequences

>NZ_CP010411.1|WP_060620116.1|333310_333787_-|30S-ribosome-binding-factor-RbfA
MAGTNPRAARIAALIQRVVASSIERELHDKRLASITVTEVRVTNDLQIAKVYWTQLGHEGHEEGERKRAQQALDQAKGHLRSLVGHKAGLRLTPQLQFVFDEVPGEAHEIEDILAMAKKRDEELARARATAQYAGDADPYKHDDEAEAEGDEFESDEE
>NZ_CP010411.1|WP_082247958.1|332145_333309_-|tRNA-pseudouridine(55)-synthase-TruB
MLQTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALPTASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKEVELKPRPVTISEFTVLNIRSGFVAGEQAAEPLREDANTGTIPALDIDVRVSCSSGTYIRALARDLGNELGVGGYLTRLRRTRVGRFALPDDTSGLIASEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLNTPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERAISDPTAAIVPQTHDVAAIIERANAHQAKPVTVFPLA
>NZ_CP010411.1|WP_060620114.1|330923_332048_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase
MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHGAFSVVILFDPRPAFVHGWAASHHGEEPAAQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGKLGMRTLVLGQDAAMGRGREGDVKHIANLAVATGVFELDVVDDRGPGEVRIPRDFKPEAPSGWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGADIAGYIPVDGVYAGWLVDGENRWPAAISIGTKPTFSEKTGLNERVVEAYCLTDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQLVDELKRNVEETKRLTA
>NZ_CP010411.1|WP_060620113.1|329370_330909_+|DNA-repair-protein-RadA
MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSRTAAPGRTSRTQSVTVANNARSAARPITEVGTESVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQTAGNIARVVAVDSTFRGAGQRSAQQSSRAQGGTSDTVSTQDNTASTHANTVLYISGEESQAQVRLRASRINAVEPNLLLASTTDLSTVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVTDPAGLFLSGDGPDAANAAPVEGTCVTFTLDGHRSLPIEVQALVTTSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVAALASAATSKPIARATCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVHVEGLRLVESNTLSDALDALGVRK
>NZ_CP010411.1|WP_060620112.1|328610_329243_-|hypothetical-protein
MTNSENSSTTQSHGKLIAVVVAAAVVIILAVLSAFVWPGWAIQKNDGTSTTTQNSQQKTESSEPTKPTIDATALPDDASELLKAMPDSVLNYARIKAVASTTWNSASPLEGYTLTYSTGDAAKDVTLVAAQWSSADNAKTQYDALVAAQTGDESASGNVKVSGNVTGAYVVKADASNSKNAVAIWQNDTVVFQATGTKEAVDRFYQKFPM
>NZ_CP010411.1|WP_004268639.1|328329_328419_-|AURKAIP1/COX24-domain-containing-protein
MGSVIKKRRKRMSKKKHRKLLRKTRHQRK
>NZ_CP010411.1|WP_012578451.1|327477_328176_+|ribose-5-phosphate-isomerase-RpiA
MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSRRTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIGKFPLPVEVIPFGAGHVIKKFEACGYKPVLRLDADGKEVRTDENNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNGPRVMTNANK
>NZ_CP010411.1|WP_005323424.1|326000_327179_-|IS256-like-element-IS1249-family-transposase
MSKNQPRCHCGGEMKRNGTTSKGTTRWRCKQCGASSVKRRNDITNAAVFTQFIEHCTTAISLDDLAKRNGVSRATMKRRFKWCWLVDVPDPTAGHHKRIYDQVFLDGTYTAGGCLIVAATIDHVIAWHWCKHETTRDYQLLLERIEAPLIAVIDGGQGAYSAIKKCWPTTKIQRCLVHAQRVVRRYTTTNPRTDAGRTIYRLALKLTRITTLDEAAAWGVQLHEFSTIYREWMNEKTMIKDPKTGAWTRVWTHHNVRKAYNSLNHLWRSEMLFVYLNPPAGVLAPERIKSTTNSLEGGINAQLKLLARTHRGRSGERQRRMLDWWLYLKTELPDDPVRIARQSDWGQGQLAKVSTLTQTENQADHETGRPALYDNAIDTDYTHSIGIQKGQI
>NZ_CP010411.1|WP_164997084.1|325063_325954_+|ribonuclease-HI
MTITVSTDGSALGNPNGPMGWAWADHEPNTGGKPGHKHDDHGYDAGGATNGTNQIGELCAVLEALRAHPGPEPLLIESDSQYAINCSTKWVKGWKKNGWRNSQKKPVKNKELIQAIDREISQRPGPVDFRWVKGHAGNEGNELVDELARTYAGDCRSGARDGYLPIEGWQSLLGSEYAHGTDVPPDVQLVLDGKADAASLRKPAAATDPTDVTRPETKSSSPLAAQSAQPVQSAHPVHPAKPSGLTVSGTLTFSPAPKTSPYFNGQPMPVKGSIEIEGYVDGDGNLTIVHAPFTRR
>NZ_CP010411.1|WP_060620110.1|322804_324448_+|FAD-dependent-oxidoreductase
MSTSTPNAISTPDTISTPSTSPTITTDALIIGFGKGGKTLAAKLSAAGRKVVVAEASANMYGGTCINIGCLPSKSLILSAEQARRDGANSTPETREAAFEAAIKEKRRVTSMLRDKNYHKLADQDNITVITGRAHFTGPHSVEIATAEGPVAVTASKIFINTGATPRIPDIPGIRTTPGVYTSTGLMDLDDMPQRLVIIGSGFIGLEFASMFADFGTAVTVLQHNAEFLPREDADVAAAIRAQLEAQGVKFLFNADTKAIAPAADGGVRLSVAVKGMTRGASQACDSTPAGTGNAHTDITGATGTTDTATTTSPTGNPTDHATMSHVQTKPSDDGEPRFAEPAEARFCLTTDAVLVATGRTPNVEGLHLEAAGVELTERGAVKVDELLRTTAADIWALGDVNGGPQHTYISLDDYRVVWSQLNGSARPYTVKDRKHVPSSTFLATPYSRVGLNEREAKAAGLDYVVKRLPVASVPKAQVMRRPDGLMKAIVERNTGRILGAMLLSVESHEVINIVKLAMDLDAPASTLRDMVFTHPTIAEALNDLFA
>NZ_CP010411.1|WP_060620118.1|337167_338235_-|transcription-termination/antitermination-protein-NusA
MELDLTGIHKLAAEQGIDPGTLDDALAEALRLAYLKTPHAAKHARVELDERSGNFTVWAADEIPVEPTEDNPHPAPKLGEEYDDTPRDFGRLAAATARQVITQLFRRAEDEKVFGAFSGQKGKLITGIIQQDASDPSNVHVAMGDVEAILPRREQVPGERYRHGERIRVYVVNVARGIKGPEIVVSRSHPELVRKLFEREVPELVSGAVSIMAIAREAGTRTKIAVKANTDGVNPKGALIGPGGARVRAVMENLGPEKIDIVDYSDDPAKFVAAALSPAVATGVQVISEKNKTAIAFIHDDQLSLAIGKEGQNARLAAKLTGWKIGIESAEAHAKKVAAEKAAQAAAEAAAPEAE
>NZ_CP010411.1|WP_060620119.1|338442_339171_+|hypothetical-protein
MSPCEKAMTLADYATHPAEGTPLLEQYATGLAAPLAWIDVAGYCLGRFAEGTLRDAQTKQWLTFLADKFGQSAPEVTPARLDGVTSANVDRSVLDAMAVAEDRAGFAIEVLAARGQTAGATLALSDMHKTAGQQLVSLANGNFDDSGAQSSSSGQSDPRQKVYAIDQLLANPTTIADKASGQTVPTAAAIEMDCARAQIKAVTESKSSTESDTLLILAALAAKHAYTAFQLGYPATDAALFE
>NZ_CP010411.1|WP_060620121.1|340096_341479_-|extracellular-solute-binding-protein
MKKSIRLVAAIAALAMTAGISACGSSTNGNQAKSDVTAQDVETALTDTSKNVELTVWAYSAKQMEPTVKAFEKKYPHIKINFVNTGAAEDHFTKFQNVVQAQKDIPDVVQMSANKFQQFAVSGALLNFANDSIEKAWSKLYTKTAWAQVHYAGGLYGAPQDATPLANYVRKDILDEHNLQVPESWEDIYNEGIKLHKEDSNKYMGILGSDISFFTNLYRSVGARLWKVNSVDDVELTMNSGKAKEFTEFLQKCLKDGVLEGGTVFTDEFNRSINDGRYATFINENWMGNTYKEQNPSLKGKMVVAAPPSWKGQPYQSSSVGSMMSVSAACPKEKQAAALAFINWLDSDKDAIQSWQDTNNGNFFMAASVYQDDENQRNKKETDGYYANDDVNAVYFDSMDKVNTDWEYLPFMSQVEVVFNDVIVPEMNENGDLVGAMAKAQQKLKAYAEDNGFKVTTDAD
>NZ_CP010411.1|WP_060620122.1|341592_342570_-|carbohydrate-ABC-transporter-permease
MSEAIAKPRSKSLQRRDAKLALKASKHYKRMQQREPAPKLTGRQRVLNWLLHIIMAVMVIYCLVPLLWVVFSSTKTSEGIFSSFGLWFDDKNVFWQNVQDTFSYQNGAYTRWLFNTIMYAVVAGVGATIIATFAGYAIATMRFPGRNALLAVTLAFMSIPSTVITVPLFLMYSKIGLVGTPWAVIIPQLATPFGLYLMIIYAQTSIPVSLIEAAKLDGASTWTIFWKVGFPLLSPGFVTVLLFTLVGVWNNYFLPLIMLSDTNDYPLTVGLNMWLKMGAQGTANGQVPNNLIITGSLIAVVPLIIAFMFLQKYWQSGLAAGSVKQ
>NZ_CP010411.1|WP_060620123.1|342569_343481_-|sugar-ABC-transporter-permease
MTNATAQPDTSVMRKPKRQYIGILYCLPYVVVFLFGMIVPMFYALYLSFFKQSLLGGTTFAGFDNFIRAFKDEALWGGFKNVLIYAAIQIPMNLILSLVAALILDSQRIRHIAVPRILLFLPYAVPGVIAALMWGYIYGDKYGLFGQIAGMFGVAAPNMLSKQLMLFAIANICTWCFLGYNMLIYYSALIGIPNDLYESARIDGASELRIAWSVKIPQIKSTIVMTVLFSVIGTLQLFNEPNILRTSAPDVINSSYTPNIYTYNLAFNGQNVNYAAAVSLVIGIIVMALVAVVKIIGNKWENK
>NZ_CP010411.1|WP_032745526.1|343899_344019_-|hypothetical-protein
MDGFTKMLDEYMVWYRDKRIKLEYGMSIMGKRIELGLVA
>NZ_CP010411.1|WP_012578462.1|345171_345972_-|transglutaminase-family-protein
MKKLVFDYEMRLSFSAPVTDHRFQLRCIPATGPRQQVIDVEVKIQPETELETTIDSFGSVVMTGFIPEPHDIFSYSVTGIAFVDNAHIHKEAYKPLYRFNSALTIPGPTVEAMIAVCRERLAALPSDATPVQQATEVMDEVYKAFVYTPGSTTIRTTAEQALAQRKGVCQDYAHVMLSVCRHVGLTARYIAGLLGGEGATHAWVEVYQDGRWVGLDPTHNRLVDDSYITIAHGRDYRDCMLDIGIFSGYNVQQSQWVNASVHEQVA
>NZ_CP010411.1|WP_060620124.1|346176_348357_-|circularly-permuted-type-2-ATP-grasp-protein
MIESAARRLAHELVNRREAINRELSRNGVRFGIYKNGEYHDRLFPYDPVPRIIESDEFDELEKGLKQRVNALNAYLKDIYSDKAIIHDGVVPEEYVYTSAGYFPQVNGVTPPGGIFAHIAGEDLVQGEDGRWWVLEDNLRIPSGASYPLFVRDIERRISPRLFRDVHIRDNREYPRLLRKAMDFVSTEGIAVVLTPGRYNSAFFEHAYLAEKTGAALAFPEDLEVVDNKVYFLDYAGKRHRVGVVYRRLSDEFLDPFAFNPDSVIGVPGILSAYRAGNVAIVNAPGNGAADDKAIYYFVPQMIKYYLGEEPILNNAPTYMPMFEADRKEVLNRMGELVIKDVAEAGGYGVVFGSSLDAAAREELANRIKEEPRRFIAQEVIQFRDIDVVDPKTGEMSPRKCDLRAFVVTGKNTHVWYSGLTRYSSVPGQMIVNSSQGGGFKDTWVLAPESGVEHEYGAETYVANLLSQSRRHSLSLVTASKADNLYWLGRYTERAFTTLNQFFPFYDRVMDTDVDAFRPFAHALDLPEDFEDFDGFVNSFLYDGSNPDSVRSAVTSAFNNAMILRPELSSRLLQYVELAMTNITDAAKYAADAEDIYKQRDITDDMLAFWGGIENSPVDPTLKAFIFIGKYLERIDLYARFGLTMEEMEAPLRKLASYSMILDGMPLPSCFTDGLSWLVGQLPSRGYQEVADLLKKYLDDYSGRVSAPAIKDMGSLSSMNMDAKRP
>NZ_CP010411.1|WP_060620125.1|348577_349489_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRLRIDLAYDGGGFYGWAKQPNLRTVQGTIEDALHKVLRVPADDADEPLRLTVAGRTDTGVHASHQVAHLDVSDEVLNRCVGHMTIPITKALTRRLKAVLPPDIVIHGIAVAPVGFDARFSALERTYVYRVADRSSEIDPRLRGCVLTVDEALDLELMNRAAALTIGLHDFGSFATPNPGGTTIREVKTAYWRRAPITPLVPDEMASHEAYRTPSLESGLVVFTIVADAFARNMVRSLVGSCIKVGSGRKSLEWFAGKMADPVREGSSGPIAPQGLTLEHIAYPADDQLAARAEAIRAVRTL
>NZ_CP010411.1|WP_060620126.1|349568_350090_-|50S-ribosomal-protein-L17
MPTPKKGPRLASSPAHERLMLANMATSLFQNGRITTTLPKAKRLRPLAERLITFAKRGDLHSRRRVMRVIRNKSVVHILFTQIAEQMEQREGGYTRIVKIAPRVGDAAPAAVIELVTEPVAKKAVVKEAEAAAKVAEEEAPAVEAEATEATETLVEEAAAVEAEAPADAEKAE

Crispr_ID: NZ_CP010411_2

• CRISPR_ID: NZ_CP010411_2
• CRISPR_location: 414078-414169
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DEDDh

Consensus repeat of NZ_CP010411_2

Consensus_repeat	Method
ACAAGTTTTTGCGTCAATAACACAAGTTT	CRISPRCasFinder

spacers of NZ_CP010411_2

>2.1|414107|34|NZ_CP010411|CRISPRCasFinder
CCCCTCAAACACGGCATTTCTAGTACCCATTGAC

CRISPR arrays and Neighbor proteins around NZ_CP010411_2

CRISPR arrays

The CRISPR arrays of NZ_CP010411_2

>merge|NZ_CP010411|2|414078-414169|CRISPRCasFinder
ACAAGTTTTTGCGTCAATAACACAAGTTTCCCCTCAAACACGGCATTTCTAGTACCCATTGACACAAGTTTCTGCGTCAATAACACAAGTTT

>NZ_CP010411|2|2|414078-414169|CRISPRCasFinder
ACAAGTTTTTGCGTCAATAACACAAGTTT	CCCCTCAAACACGGCATTTCTAGTACCCATTGAC
ACAAGTTTCTGCGTCAATAACACAAGTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_032743631.1|428623_428836_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_032743632.1|427862_428627_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620146.1|402758_405503_-|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl|CDD|131743
NZ_CP010411.1|WP_007056226.1|422804_423566_+|ATP-binding-protein	unknown	unknown	gnl|CDD|181681
NZ_CP010411.1|WP_010081696.1|408719_408920_-|type-2-lantibiotic	unknown	unknown	gnl|CDD|274837
NZ_CP010411.1|WP_060620153.1|417907_420292_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NZ_CP010411.1|WP_060621479.1|410378_411050_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP010411.1|WP_060620152.1|416139_417717_-|SpaH/EbpB-family-LPXTG-anchored-major-pilin	unknown	unknown	gnl|CDD|275067
NZ_CP010411.1|WP_082247964.1|406238_407189_-|ABC-transporter	unknown	unknown	gnl|CDD|225183
NZ_CP010411.1|WP_060620156.1|426502_427750_-|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|176648
NZ_CP010411.1|WP_007052999.1|400740_402135_+|NCS2-family-permease	unknown	unknown	gnl|CDD|225161
NZ_CP010411.1|WP_060620148.1|407976_408636_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_014485310.1|412330_413017_-|teichoic-acid-transporter	unknown	unknown	unknown
NZ_CP010411.1|WP_060620147.1|407103_407922_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP010411.1|WP_164997086.1|421314_422808_+|IS21-family-transposase	unknown	unknown	gnl|CDD|226950
NZ_CP010411.1|WP_060620154.1|423912_425178_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NZ_CP010411.1|WP_129558949.1|414757_416005_-|hypothetical-protein	unknown	unknown	gnl|CDD|350159
NZ_CP010411.1|WP_007053775.1|405778_406048_-|30S-ribosomal-protein-S15	unknown	unknown	gnl|CDD|180170
NZ_CP010411.1|WP_060620149.1|409224_410385_-|histidine-kinase	unknown	unknown	gnl|CDD|223571
NZ_CP010411.1|WP_060620157.1|429114_429561_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP010411.1|WP_060620156.1|426502_427750_-|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	2.4e-48	159.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_060620146.1|402758_405503_-|polyribonucleotide-nucleotidyltransferase	gnl|CDD|131743	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase. Sohlberg, et al. present characterization of two proteins from Streptomyces coelicolor. The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. Reference 2 showed that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase.	0
NZ_CP010411.1|WP_007056226.1|422804_423566_+|ATP-binding-protein	gnl|CDD|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	1.08406e-56
NZ_CP010411.1|WP_010081696.1|408719_408920_-|type-2-lantibiotic	gnl|CDD|274837	TIGR03893, conserved_domain_protein, type 2 lantibiotic, SP_1948 family. This model recognizes a number of type 2 lantibiotic-type bacteriocins, related to but distinct from the family that includes lichenicidin and mersacidin. Sequence similarity among members consists largely of a 20-residue block of conserved sequence that covers most of the leader peptide region, absent from the mature lantibiotic. This is followed by a region with characteristic composition for lantibiotic precursor regions, rich in Ser and Thr and including a near-invariant Cys near or at the C-terminus, involved in cyclization. Members of this family typically are shorter than 70 amino acids. [Cellular processes, Toxin production and resistance].	3.94922e-09
NZ_CP010411.1|WP_060620153.1|417907_420292_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	8.78122e-19
NZ_CP010411.1|WP_060621479.1|410378_411050_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.96806e-29
NZ_CP010411.1|WP_060620152.1|416139_417717_-|SpaH/EbpB-family-LPXTG-anchored-major-pilin	gnl|CDD|275067	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain. The Streptococcus Pneumoniae pilus backbone protein, RrgB, has three tandem domains with Lys-to-Asn isopeptide bonds, but these three regions are extremely divergent in sequence. This model represents the homology domain family of the D2 domain. It occurs just once in many surface proteins but up to twenty times in some pilin subunit proteins. Three of every four members have the typical Gram-positive C-terminal motif, LPXTG, although in many cases this motif may be involved in pilin subunit cross-linking rather than cell wall attachment. Proteins with this domain include fimbrial proteins with lectin-like adhesion functions, and the majority of characterized members are involved in surface adhesion to host structures.	4.98299e-11
NZ_CP010411.1|WP_082247964.1|406238_407189_-|ABC-transporter	gnl|CDD|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	6.026e-47
NZ_CP010411.1|WP_060620156.1|426502_427750_-|hypothetical-protein	gnl|CDD|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	3.06635e-55
NZ_CP010411.1|WP_007052999.1|400740_402135_+|NCS2-family-permease	gnl|CDD|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.93561e-142
NZ_CP010411.1|WP_060620147.1|407103_407922_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.62658e-50
NZ_CP010411.1|WP_164997086.1|421314_422808_+|IS21-family-transposase	gnl|CDD|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.95965e-24
NZ_CP010411.1|WP_060620154.1|423912_425178_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.61722e-19
NZ_CP010411.1|WP_007053775.1|405778_406048_-|30S-ribosomal-protein-S15	gnl|CDD|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.96802e-53
NZ_CP010411.1|WP_129558949.1|414757_416005_-|hypothetical-protein	gnl|CDD|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	0.000135092
NZ_CP010411.1|WP_060620149.1|409224_410385_-|histidine-kinase	gnl|CDD|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0.00768151

Protein sequences

>NZ_CP010411.1|WP_014485310.1|412330_413017_-|teichoic-acid-transporter
MEQESNEQEPNEATEIVGGKVETVEVSKHPEASIPETDLSLADIERRRSHPLRWALIILAVLCAIIAPYWFGRSLAVNNTDSIVAVLGGVSPQGIALVGWVTVVIAYVGLAMAVVVSPSWPWLIVFVIGLAGEQFIAGLSMLNLNFWYSTYVVYGKQAGLANAANLGIMGAAIGIAVYALVFVGLLVIIRKTSPLNVLTKSWASFILYFVIETIALLVVLFGGLLTTV
>NZ_CP010411.1|WP_060621479.1|410378_411050_-|response-regulator-transcription-factor
MGNPNEIRLAIVDNDDFVLMGLAAFLSRHLPNVRLAWKANTGTDALEYATDPANETDILLVDMSLEDMPGDMVCREIRSRNRMLPLLAVTSFSLIRYARRAAEGGAQGIVSKADFPALCKAVKLVSDGHTLCVRVGGETIGFEDVDAAYHRLVRLPVNRIERLSEREKYAMELYSQSYKPTQIARMMDVSAGTVKTYLDRVQNKLHLTSRAELIAYWWRRERW
>NZ_CP010411.1|WP_060620149.1|409224_410385_-|histidine-kinase
MVRRLAMKTILVVRKKCLGVSKKNLVLSIVAMTCLAACIAEWILDSPESLNDGFIRIVYMLAVSMLPLYPVPATWGIIVIAFLNELMPCLSQCDESWGVLVSLAIQGYAAVWWNGVTATVLLSISALLNYAIYRENSEFGSFDGSINLVVLLWFVFLLGVWLRQRNGLEKKKELEKKAEIVRYNLQLAEGMHDAMSGELTRMLVIVQEGIDASKEEELKRWRKLQNGINKIFQDLHSVMNYLSDDDHKQDEVFHVSLAEHIQATLSESDRRLHDKGFCGHSSLRGVSSAMSNSWNQIIVNLLREIYTNIERYADKSEYSVIVTFSNNAVDIVQVNKCRQKSRRYVTLGARKGLSIYSRLISRQGGFIRYEKDGEEWSFYCMLPLLT
>NZ_CP010411.1|WP_010081696.1|408719_408920_-|type-2-lantibiotic
MSINEKSIVGESFEDLSAADMAMLTGRNDDGVAPASLSFAVSVLSVSFSACSVTVVTRLASCGNCK
>NZ_CP010411.1|WP_060620148.1|407976_408636_-|hypothetical-protein
MKAILFRDCKACFQSFKNWGMVLIIMVTAIFVEMVASGAGILDPFTWAVFFGPFFIYSSCSVMVSILYQDFRDGLFELYIQSGRSYWSYCWCKCLFPVILTVISVLLNLAFMRVLSSGFQITAGADDAIGALIVSVLGTIVCSLGAMPMVYVSRNSDPTMAQLVLVLIAILLQLAYMLVIVNVMPLCLFSVGYVVLVVVAIGISTRVFSRYFINTNIEL
>NZ_CP010411.1|WP_060620147.1|407103_407922_-|ABC-transporter-ATP-binding-protein
MTADHINHADRTDNGEHAIIAVEHVTFGYKKKQTVLEDIDFTVPQGQSLAILGYNGVGKTTLFRLIVGLLRPRAGRCVIDRRRVPSMRDVFQMTENGNLVGTMTVRDNIHFRQLLFRSGKGIADGGHTVDSKRLEDEPLVRAFELEGHLDKKVAELSTGLRKRVGIVAGMLFDPHVIMLDEPSNAIDPITRSLLVDYVNQLRADERTLLTVTHDLEYCWNVADRIIILDDKHLVKDMMLAEFDDYEAFTKASTLGRDRTHVDFGLPSRGRQA
>NZ_CP010411.1|WP_082247964.1|406238_407189_-|ABC-transporter
MRRSPRRPRSGVTARTSTSAFPRADGKHEIMASPPCPVYRTRRIADPANGRHAYTPGELAAHCSGAVLIPQPTNDGCATIPIRPRSGPVSILTGFLRRNMPAIGLSLLFSLVVQGLTLIVPAGTGYMVDHGALAAQSGFQPLVATMLLASLLKLLAGLIEPVCGTVTINDGGCRIYDADSRWKAGRLAYVHQESTVFNETLRDNITLHRPWLTDDDIVRACEVAGINEGMMDPVVGRPDFLLMDEPTSALDNDTERHVMTALLDSDNACIVVAHRLASIRDFDRIHVMDHGQIVESGTHDELLQAGGLYSRLYRQE
>NZ_CP010411.1|WP_007053775.1|405778_406048_-|30S-ribosomal-protein-S15
MALTADEKTQIINEYATHEGDTGSPEVQVALLSKRIADLTEHLKEHKHDHHSRRGMQLMIGDRRRLLDYLKRVDINRYRSLIERLGLRR
>NZ_CP010411.1|WP_060620146.1|402758_405503_-|polyribonucleotide-nucleotidyltransferase
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKENYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQVVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERERAVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKVICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEIKEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSAEVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGETGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLSLLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITALQLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTSVPVEKIGEVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAKKAKSIIDSIANPHVPEAGETYNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVDDRGKISLAIPGFEDQENNARPSRGDRDDRRGGRGRGDRDDRRGGRGRRSDRDDRDFDDRDDRPRRRRSDDFEDDYDDRPRRRRSDDRDFDRDDRDDDRPRRRRSADRDFDDRDDRDARDSRDDDRPRRRRSADRDDRGDRDDRRGGFRGGRGRGSDRNPRYATDDNYDDYRADREERTERPRRRVRRDFDPFED
>NZ_CP010411.1|WP_007052999.1|400740_402135_+|NCS2-family-permease
MEKFFHLKENGTTVSTEILAGLTTFFAMAYIIVVNPQILSQTGMPWGGVFLATIIAAIIGTLVMGLFANVPYAQAAGMGLNAFFTYTVCFGLGFSWQQTMCMVFLCGLINILITVTKIRKMIILAIPESLQHAIGGGIGLFVAYVGMLNVGLIKFTPGDPKAAAKGGAVAATPGLANFNDKVLWVFLIGLVLAIVFTVMKVKGGMLLAIAITTVIGIPFGVTTWSNSQSISETFSQLPQTFGAIFSAEGFPALFSDPTKLPLVIVTIFAFSMSDTFDTLGTFIGTGRRTGIFSAEDEKALENGHGFSSKMDKALFADSIATSIGAICGTSNTTTYVESSAGIAAGGRTGLTSVVVAICFALSAFLAPVVSAVPSAATAGVLVIVGCMMAASLKEVKWDDIAEAIPAFFAAVFMAFSYSISYGIAGGFIMYCIVKTCKGKAKEVHPIIWTVAALFILDFVCMAIL
>NZ_CP010411.1|WP_129558949.1|414757_416005_-|hypothetical-protein
MAIDDIDIVIITALAEEGVAVEKIGQDFYDINWETNCDSQIGVVRIGVLKTDSSHLLKIMLASAANEGSSVAPVINHINDTYHPSMLTMCGVCAGDPERTHLCDVIVADSVYSLDSGKKENGEFLPEINTSPVYKKLNQVVNDFVVHARIDQLPTQPEVIEMMQQQNTMPGGSFNVHIGPVACGEQIADYDAFWENVARRGKYKTIGYEMEGNHLGYASQWGQVPYLFFKGVMDFASGKTDGCKKIAERTAADALLAFLKSKQFGIFFGSLPKKKSYKKTVDDFNVLLEKLTADAWDEYKNALVTGRNTSKRDKILNDYKKRVADIGNNCPSTIPAATRIFPYMNYYGYLYLDCLMRPNHRLCPHMLAGDPYADLVESLLGDDNATIGLQDVLTLHNRSRTDFMVASELIHSSDE
>NZ_CP010411.1|WP_060620152.1|416139_417717_-|SpaH/EbpB-family-LPXTG-anchored-major-pilin
MKLRKLFAGVAAAATLLGGMAFGAATANAADTDQATITVNNAQAGYTYTGYKFATFDNVQGTAPNATSVEVNTVAAWKDAVYQAADAANGGQQNDVPAEYAENPAAYVATFDAATARRFTDELTKRIPAGEQSTAAVNGVITATEGWFLVTSTAKTAGKSALVATQITNGGKTYTKITLNTEDGQHNIDTLGQFNAKDENVPTPPTKTADGKGTVNVGDTVNYTITAVVPPAAAGYDTYKYTITDAASKGLNVAEDNANFTVVVKKGNTDGTDKTLAKDTDYTLTQNGSASDENGTVTTIAFPNVKDYAGKTIQVTYKGVVTSDAVDQVTNTATVKNNNDQTGEGTTVVKKLGKFDFTKIGVGNDATGLAGAEFKVSADKGKTFIKFSQDANGVYYPDATNGSETLTSADGKGAQKTLGKVAVRGLAEGVYTVQETKAPTGYAENFKVTFTVTIGENGGEGTLTVDNLHQVNTTDKTVLNVKSITQLPLTGAAGTMLFTVVAVLLAGVAATVFAKSRSTKRALNA
>NZ_CP010411.1|WP_060620153.1|417907_420292_-|VWA-domain-containing-protein
MAVVAAVAMLGGVAGVAGVSATAMADDGNASTTQSQTTDEKAAASVPTPLSTEGTNGVPDDPTLSAPAREKTVTANGDGTYKVALNVTGAKSAGTGEIVTNQPLDIVLVLDVSGSMAEKIAWNQPTKIDSLKTAVNNFIKATADENAKITDQNLQNRIALVKFAGTASDNVGNDTYWDYRWGQRYNNSQIVTNLTSNLNGLTSTVDSLNAAGATQADYGFQKARVALQNARTDAKKVIIFFTDGQPTSSNEFENSVANGAVRNAKVLKDAGATVYSIGVFGDANPNNTSTNWNNRFNAYMHAVSSNYPNATAWNRLGNRADNSSYYKAATDADQLNNIFGSIRQEITKTAEYADVTIHDKLSSWVVSSDGASVNGEPAGFTYTKTQHGQTAAWAGAPEATVAADGTVSWPVTSDGGKLEDGVTYTVSFNVKPTQAAFDNAASATPEKDAASDEANTDDPNKGNANSYFTNDNPGATVGYRTVVTSSQGGTTTSNPQTALYPQKPTITLPVSKITVTKTWSDGSENHADDSVQVQLKQDGRDYANGSATLNAAGNWTHEFTVSAGPEGHAYSVSEVKVEGYDSKVDKTDLKLQGLTAQSGAFTVTNTPSYVALPASDVKVTKVVQGHAANSDFSFNLKCVDSTDANAGKCADVTGLVNNGLTTTVSKGELTASGASATVGFGNGDLKFRVPTGNATQLVYKFNVTEDRTNVPAGWRYDGSTKTVTVTIAKNDDGQWAATVNDNNPTFMNKYIAVSSLPLTGGRSARDWLVCGGGLGLMALLAAAGYTVWRKRQLV
>NZ_CP010411.1|WP_164997086.1|421314_422808_+|IS21-family-transposase
MISMPQVQSIRRLRRNGESVASIARKTHVSEPTVRKYLAKEDLSAVPSVRKPRASVIDPYLPVIEQWLAEDRANWRKQRHTATRIWERLRDEHGAEVSLSTVTRAVARLRREFAAERDEAFMDLVWHPGEAQADFGEVDVLLRGVVQRMHHFVLDFPYSNVGLVQLMPGENAECTCLALRNLFEWLGGVPERIVFDNAAGVGHKGYGEREPRLTHLFQAFQAHYGFDCSFCNPYSGHEKGAVESKVGMVRRKLFVPRPSVWSLENFNAGLPDRCLELATKPHYRKDTEERGLFSEDRAALLPLPGKRFDVVTWRHMKADRYGVVTLEGRHRYSADRANAGREVIVGLRALEVEVLDSSGKHLATHPRAYGQASTNSEDPSMQLALLCNKPASWPNSRVRDALPDPLREWLDRQDRQTRNEALQTLKRVDRESGWANAVEAMLSILESTGGADRAGVTLLAARLAEGVAGIEYDDDRPDLSEYDIAFTADVGVQEGGR
>NZ_CP010411.1|WP_007056226.1|422804_423566_+|ATP-binding-protein
MNTKTDEGLYEKARKLFISKASIDEFAGWATPRQVDAVHRLLDTELANRERAKHDRLLRRARFPVVKGLDGYDFTNVRLPDGYMLDELLGLGFIPRAQDLVFYGKTGRGKTHLAIGLGMKAIDMGLGVRFHQTAELVLQLGKAKRDGTLETMLRDIGRADLIILDEFGYVPFDIDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTVFADDKLAAAIIDRIVHHGRLLEFTGQSRRVSEALMFGRNTSAQPEK
>NZ_CP010411.1|WP_060620154.1|423912_425178_+|IS110-family-transposase
MTPPNEVVWAGIDTHTDTHTIALLDERGRPLGAETFTADPDGYDRLIGMLPGPGRVAAVGVEGTNSFGAALARRLTAAGYEVREVLRPRRSVRRRDGKSDPLDAVAAARSVMAGDGTSLPKSSDGWVEALRHLNAQRSQLVSAMTAISNSTNGLLVTAPEPIRERYRGLRSETRMNRLAECRPAGGLVERSVLAALKSAAKAWKALKRQAGLLEERMRLILEEHARPLLDMYCAGAVIAATLAIVAGDNPERIRSEAAFAKLCGVCPIPASSGRTNRHRLNKGGNRQGNMALHRIAIVRLRYHKPTRDYMAKKTREGKGKLEIIRCVKRFIAREAYRALISIRNGEVGRGTPAERGAKLRELRVSRNITQQQIGEALCVPSSRISEIERGARDLPELEQRAIQWIHSTTNPKQHTQTLDNV
>NZ_CP010411.1|WP_060620156.1|426502_427750_-|hypothetical-protein
MIPREHKGASVLADRKDYVALDLETTGYDPRLDEIIEIGAIKVRNGQPIDRYGQLINPGRHIPNIVTEIHGIDDGMVKNAPTLADVLSEFLDWMGDGLILGHNVNFDINFLYDNAEDICGKYVGNDFIDTLRLARYLYPEERHNRLQDLIVRFDIAEDQEHRALADVEQTIACYRWMIRHMNENGIPFPAGDGRSRRGLSSLFRGGDQLLQIAPQDEVTPDPAFENLTFVFTGALKKMTRANAQQAVTNLGGINGKTVTKDTNYLITGSTDYNAALKGSKSSKWLKAEKLQLAGQDLNIISEDVFYDMLGDSIAQAPTQSQLKFKITQPACKKILEIPSGNLDAKEVSVLAVDDRTKPSIVLKTQDGEILAEFSSRMKAYETIAALDGRTIELTATKHDEFGSAPYFNAKAKIIR
>NZ_CP010411.1|WP_032743632.1|427862_428627_-|hypothetical-protein
MSTESDQTEEQAIDFAQRLENMLTEVLGQPSDGQYTADPQGARKKRSASYLIKTRDPQGISLTVGGSTILRLSYRYQCSCRDSNSYLQVDESAITLRAESDPAPIIHYDFVRDPHSAIPAAHINIHASNDSATKAMLACGSKSQGKNRRKAFLEKGTFPTFSSLHFPVGGDRFRPGLEDVLQMAIYEFGIDAQPQWQQAIEQSRAEYRTRQISALVCEFPDIAYQALSQNGYLDSGTPPQRPEREDTKSRLTKY
>NZ_CP010411.1|WP_032743631.1|428623_428836_-|hypothetical-protein
MTAVAVAPKAHKIGRPVMLDSEEIRKRRNVLEGKYGTREQLSQKRDLIGLTLEERIALYDLEDLDFLEGR
>NZ_CP010411.1|WP_060620157.1|429114_429561_-|hypothetical-protein
MMPERENGKMGKIVKWVKDNGLAFAREMAGRHDADMSNEGASRQFRRDMERATAAFAELGADKQKMYELLRKWFGVDSMEEADSYIRDGAQFEYPMTLLEEYLKHEGYETMDIIRFKRDHNVAERLRRDPSLSSLTPEQLKQRMEQNK

Crispr_ID: NZ_CP010411_3

• CRISPR_ID: NZ_CP010411_3
• CRISPR_location: 1134858-1134933
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP010411_3

Consensus_repeat	Method
GCGACGCATTCCCGGGAATGTCGCG	CRISPRCasFinder

spacers of NZ_CP010411_3

>3.1|1134883|26|NZ_CP010411|CRISPRCasFinder
TTAGGCGGGGTGTGAGGGGTGGTTCC

CRISPR arrays and Neighbor proteins around NZ_CP010411_3

CRISPR arrays

The CRISPR arrays of NZ_CP010411_3

>merge|NZ_CP010411|3|1134858-1134933|CRISPRCasFinder
GCGACGCATTCCCGGGAATGTCGCGTTAGGCGGGGTGTGAGGGGTGGTTCCGCGACGCATTCCCGGGAATGTTGCG

>NZ_CP010411|3|3|1134858-1134933|CRISPRCasFinder
GCGACGCATTCCCGGGAATGTCGCG	TTAGGCGGGGTGTGAGGGGTGGTTCC
GCGACGCATTCCCGGGAATGTTGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_060620535.1|1145482_1146916_-|aspartate-ammonia-lyase	unknown	unknown	gnl|CDD|237031
NZ_CP010411.1|WP_060620528.1|1134402_1134792_+|regulator	unknown	unknown	gnl|CDD|129116
NZ_CP010411.1|WP_060620527.1|1130890_1131517_-|CYTH-domain-containing-protein	unknown	unknown	gnl|CDD|143629
NZ_CP010411.1|WP_060620525.1|1128578_1129586_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_012576752.1|1135984_1136986_+|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|234629
NZ_CP010411.1|WP_013140175.1|1139787_1140735_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226616
NZ_CP010411.1|WP_060620524.1|1127508_1128579_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620532.1|1141665_1142952_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NZ_CP010411.1|WP_158082791.1|1132122_1132299_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620534.1|1144505_1145303_-|mechanosensitive-ion-channel	unknown	unknown	gnl|CDD|366370
NZ_CP010411.1|WP_060620526.1|1129833_1130808_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|225660
NZ_CP010411.1|WP_060620529.1|1137172_1138360_+|D-alanine--D-alanine-ligase	unknown	unknown	gnl|CDD|234993
NZ_CP010411.1|WP_060620522.1|1125622_1126393_+|endonuclease-NucS	unknown	unknown	gnl|CDD|235114
NZ_CP010411.1|WP_060620523.1|1126438_1127428_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl|CDD|223619
NZ_CP010411.1|WP_060620521.1|1123769_1125242_+|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl|CDD|236447
NZ_CP010411.1|WP_060620530.1|1138611_1139778_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270267
NZ_CP010411.1|WP_082248166.1|1140839_1141661_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224098
NZ_CP010411.1|WP_060620533.1|1143423_1144467_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NZ_CP010411.1|WP_060620536.1|1147033_1147765_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP010411.1|WP_012576745.1|1125241_1125535_+|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl|CDD|184055

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_060620535.1|1145482_1146916_-|aspartate-ammonia-lyase	gnl|CDD|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NZ_CP010411.1|WP_060620528.1|1134402_1134792_+|regulator	gnl|CDD|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	1.66868e-44
NZ_CP010411.1|WP_060620527.1|1130890_1131517_-|CYTH-domain-containing-protein	gnl|CDD|143629	cd07891, CYTH-like_CthTTM-like_1, CYTH-like Clostridium thermocellum TTM-like subgroup 1. This subgroup contains the triphosphate tunnel metalloenzyme (TTM) from Clostridium thermocellum (CthTTM) and similar proteins. These are found primarily in bacteria. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. These enzymes are members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily, which have a unique active site located within an eight-stranded beta barrel.	7.96397e-52
NZ_CP010411.1|WP_060620533.1|1143423_1144467_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.13922e-14
NZ_CP010411.1|WP_012576752.1|1135984_1136986_+|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase	gnl|CDD|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	1.18158e-144
NZ_CP010411.1|WP_013140175.1|1139787_1140735_+|ABC-transporter-permease-subunit	gnl|CDD|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	7.51463e-67
NZ_CP010411.1|WP_060620532.1|1141665_1142952_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.70211e-136
NZ_CP010411.1|WP_060620534.1|1144505_1145303_-|mechanosensitive-ion-channel	gnl|CDD|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	2.17696e-27
NZ_CP010411.1|WP_060620526.1|1129833_1130808_+|tetratricopeptide-repeat-protein	gnl|CDD|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	6.90991e-30
NZ_CP010411.1|WP_060620529.1|1137172_1138360_+|D-alanine--D-alanine-ligase	gnl|CDD|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	2.1849e-166
NZ_CP010411.1|WP_060620522.1|1125622_1126393_+|endonuclease-NucS	gnl|CDD|235114	PRK03298, PRK03298, endonuclease NucS.	1.89057e-145
NZ_CP010411.1|WP_060620523.1|1126438_1127428_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl|CDD|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	4.07391e-27
NZ_CP010411.1|WP_060620521.1|1123769_1125242_+|F0F1-ATP-synthase-subunit-beta	gnl|CDD|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP010411.1|WP_060620530.1|1138611_1139778_+|ABC-transporter-substrate-binding-protein	gnl|CDD|270267	cd13549, PBP2_Fbp_like_3, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.08845e-26
NZ_CP010411.1|WP_082248166.1|1140839_1141661_+|ABC-transporter-permease-subunit	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	2.48468e-24
NZ_CP010411.1|WP_060620536.1|1147033_1147765_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.4339e-07
NZ_CP010411.1|WP_012576745.1|1125241_1125535_+|F0F1-ATP-synthase-subunit-epsilon	gnl|CDD|184055	PRK13442, atpC, F0F1 ATP synthase subunit epsilon; Provisional.	7.87055e-42

Protein sequences

>NZ_CP010411.1|WP_060620528.1|1134402_1134792_+|regulator
MGDRMEAVSTAEAPAALGAYSQAVKANGFVFVSGQLGIDPATGELAGETAGEQAAQALKNIKHILDTAGTGIEHVCRATIYLKNVEDFKEVDARYAEAFIGSVKPARVAFGNNMIPKGALVEIDAIAVE
>NZ_CP010411.1|WP_158082791.1|1132122_1132299_-|hypothetical-protein
MRDNNEKPPEGGPLLFAFATVFIVIVATRIDAWTADAIAIAFTCYAIATDRRNNKRKP
>NZ_CP010411.1|WP_060620527.1|1130890_1131517_-|CYTH-domain-containing-protein
MSEPTDDFEYERRFFCRELPAEYDDGDAPTLIIQSYYVHADNYALRVRLVSHKVHVDMTSDVNPVAVLDEYRDRFSEAYVTVKGPSVGGTRYEVEREIDTRIAAELIKRGGSVIIKNRYSVWIAEDGWSVDVFGGSNAPLIVAEAERSGPVTNLTIPKFCITEITDQARFNNDGLANRPFCKWADDFEEELALEGPRFQQYFGKNRMV
>NZ_CP010411.1|WP_060620526.1|1129833_1130808_+|tetratricopeptide-repeat-protein
MAEQQFNPGVSLAGAVDLEALKHQVKAEPGQAGGAPAAGGYVIDTTENTFQAMVQTSATFPILLLLWVPTDDRLFPMARVLGDAVNALNGQMQLSRIDISSNPSIAQALQVQGAPALFALIAGRPMPLLQGLPGDDELKQLTDEVIPKIIQAAAQSGVNGTAPYSGDPDSDAAKSAGATGAGAGAEQVPPEHAEAHRLAEEGDYAGAAAEYERVLESDPSDALAARERAKALLLARSRAADVRDVRAAAAAAPDDVEAQLAVADIDMIGGQIQDAFDRLLDFLAAGHKADIEQVRKRLLEYFAIPEPTDPRLARARRRLATLMY
>NZ_CP010411.1|WP_060620525.1|1128578_1129586_+|hypothetical-protein
MNKRWNKLCVAALACVALVVPLTACEGRLPTPAADTSTKVAPDLTETQEKKIRLKILKTIDEADQAKNPNGYAAVMGGPQLDIRISQTTINQRGGGMSQYATIPKDIAQTVIPTDDGWPRSVFTITTTTEDQQSKRLLVFDQESAQQNYKLMAMARLFEGAKLPKFEIPTLGSQMGTAKDEKLVATPADALTQYADVLQNGSKSQYASKFADDLLRQELANTTAKVQEGMQRNNGTQEQKFTAVPEQMWVMRAADGAGDLVVGRINGEWTRKAGDGRESQPASDDEKALFNSDKYTSTMKVTYVNVVALYIPLASSGEQITAVGADRQPVKVEAL
>NZ_CP010411.1|WP_060620524.1|1127508_1128579_+|hypothetical-protein
MSAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASATMSGSRYAVTDPNVLTLLDQNATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITGLASWSELSTQKGSSTSQGAPTSADDAVSFKDSDMWTDVRCGTGSVSLESKKTGASTVAIVDLGENATNAKVQLHWVRSEVPDFAMPFYLSGGLLAILAVLCASVFAMPPHKRRKRMVEGTASAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLVADQQTGAESGAETGFSAGDNESTSVITPDELQAYFSRLAQEVNTGDDSADAGQEES
>NZ_CP010411.1|WP_060620523.1|1126438_1127428_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MRKSVKSMLSPLGKAVALACSLAMCVSLAACSSSSSDSKSSSSGSSSSSDSSDKKGQIAGVTAKGKLGEKPTISFNTPMTVSDGSYVVLQKGDGDVIEEGDRVCAQGIALNVKDGTELMDTWTKNTPDCSLKVDSKTLSSTYYNQIKGAKINTTIGFGVNAQDSSGYSYILAMTFVSKSKDLKKATGEEVKDVPANLPKVTRAKNGKPSIDMNGQGSVDSLISQTLIKGNGAKLTDKNTVVVKYTGWLTNGKQFDSSWDRDSTIDADLFSDSSGQHQVIEGWQKGLVGQTVGSQVLLVIPPDQAYGDKEQGSIPANSTLVFVIDILAAY
>NZ_CP010411.1|WP_060620522.1|1125622_1126393_+|endonuclease-NucS
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREIDPAAKSAQHSRESVAGGAVDGDSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSDQAYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRREYPTAIGPVDIMAVNAEGEHVAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLILDYDDMKGTEDDSLRLF
>NZ_CP010411.1|WP_012576745.1|1125241_1125535_+|F0F1-ATP-synthase-subunit-epsilon
MAAEKTTMKVNIVAADHPVWHGEATSVTIPASEGGMGILPDHEPVLTVIKQGTLTVVEPDGDRHMFEVTDGFISFDSNKLTVAVERGHDVQYSGIAE
>NZ_CP010411.1|WP_060620521.1|1123769_1125242_+|F0F1-ATP-synthase-subunit-beta
MADNQTTAAEPTNGRVTRVQGSVIDVEFPVGHLPDIYNALKVTIVNTGAKEEGEAKETEITLEVEQHLGDSTVRCVALKPTDGLVRGATVSDTGVPISVPVGDVTKGHVFDVSGNILNKKPDETITVSERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELSEEDKTTVNRARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDLEEKWHNMQKELGA
>NZ_CP010411.1|WP_012576752.1|1135984_1136986_+|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase
MGKNITVLGAGAWGTAFGQVLADAGNTVTMWAKEQRIVEDIRDRHHNAVRLPSVEKLPDNMTATGDRAEAVKNADIVVVAIAAQFARVALVEFKGLIPDHAIVVSLMKGIERGTNKRMDEVVRESLDLPADRFAAISGPNLSKEIADRHPAATVVACTNLDNATKVAEACTTSYFKPFVTTDVIGLEMCGSLKNVTALAVGMARGAGYGENTAAMIETRGLAELTALGAAAGADPKTFFGLAGVGDLIATCGSPLSRNYTFGANLGKGLTVEEATKVSNGVAEGVPTTDAVVALGEQLDVPTPLAYQMSRVLNEGISCSEMLAGLFGHEVTGE
>NZ_CP010411.1|WP_060620529.1|1137172_1138360_+|D-alanine--D-alanine-ligase
MAKKRVVVLYGGRADEHSISCISTAGVLGAMDTERFEPIPVGITKDGKWIINGEDPRGWNLDGGELPTVKITPESRPVMLDPSRGQDGFFIGEPSHINSADSGFGTSFVSMPDPEVHHALTSLGHVDAVLPVLHGPYGEDGTVQGLLEMMGVPYVGCGVFASAACMDKHYTKVVLGAAGIPTAPGVTVDARNFTAADVLAKIEDAGLTYPLFIKPSRAGSSFGVTKVEKTDDRETQQDRLAAAIATAGEHDWKVLVEQGIDGREIECAVLCPKAGDEPEASWPGEIVLDHQNDDQFYDFDSKYMDASASHVEVPADLPVSVLEDVRDVARRAFKAVDGAGLSRVDTFVTPDGTVMVNEINTMPGFTPISMYPKAWDATGVSYTELITRLIEGVLR
>NZ_CP010411.1|WP_060620530.1|1138611_1139778_+|ABC-transporter-substrate-binding-protein
MNNLRKIAAGSLAAVLAFSMAACGSNNASSDGTGESTGKAVTVNEKSAKATSLADFGTMEDLEKAAKEEGALNVIALPHDWSNYGEVIEGFKKKYPEIKVTELNPNASSKEELDAAKTNKGTDAAPDVFDVGQAIAATSTDYFAPYKVQAWNKIPDAAKNADGAYYADYTGIMSVGWNADKYGDVASLNDLLDSKFAGTVSLNGKPTEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKLKEAGNLNTIDVTNGTIDSGQTGVVFDWTYNQASYKKELKSKGVNWKYKTFPKAQVVSYYNQAINKDAPHPAAARLWEEYLYTAETQNLWFKGGANPVLLDSMKADGTVDQATLKDAITIEGQPVTYSNDDSTRITEWLQNNWDKTIGN
>NZ_CP010411.1|WP_013140175.1|1139787_1140735_+|ABC-transporter-permease-subunit
MTAAIAPIAPNGPAASKAAGPSAASTPASSALAKHRQELGTLATTLPFFAYTACFLLAPTVIVIIGAFQDRSGGFTLANFHKMFEANTIAAFGTSILVSVASSLIGAVVGALASYALVIGAKPNGPLRRMVAAISSVLAQFGGVMLAFAFIATLGINGIGTMLIKTLTGYTVNPNWLSSLPGLVTVYCYFQIPLMIIIFLPAVDSIRPQWREACESLGGNTVQYWTRVACPILAPRFISAFLLLFASAFSAYATAAALFSQRSILVPLMIQGAMRNEMDPNQQGFAQVLAFAMIIVVAIVMLLSHAVEKRAGRWQ
>NZ_CP010411.1|WP_082248166.1|1140839_1141661_+|ABC-transporter-permease-subunit
MRAARVRRQSVIKFVILFATLSFLFVPLLAMFIFTLRHPLSGRWSAAPWTAIFTGNGESLGADLSVLWQGVGISLSLSAVTVVIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRAIAVGLNSIDVKTLVEASRSLGASWPKVFLKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQISTAMSLLALLFGVVLLVALDLISDAMRKSREGK
>NZ_CP010411.1|WP_060620532.1|1141665_1142952_+|ABC-transporter-ATP-binding-protein
MNNDSTPTRQETGTAVDAAPASPAIPAAVSSTAEDAFKNDPTATLEGVRGKDVTKAAKALLKDTAKRGGGSIQMQNVIKIYPGSTVHALDDFNLDIKPGEMVVLLGGSGCGKSTALRSLAGLEDIQGGRIMVGGQDVTGVPVNKREMAMVFQAYSLFPHMTALENVEFGLEVRGMGKAERRKIAMEQLELVGLVDQAKKYTQQMSGGQQQRVALARALAIKPRVLLLDEPLSALDAKVRVQLRDQIRRIQLTTGTTTVFVTHDQEEALAVADRIGVMNKGKIEQIAAPQDLYQRPATEYVATFIGLTNRLLGASNGDEAVVFGQRVPLLAGSAKGDSVAVLVRPENLTLTPAGDNDSHVGERARVEVIHFLGSLVRVDTLITSDEYQRWNKGEQLKATVQLPASELPAGLAVGDDVIVAPRPVAALAC
>NZ_CP010411.1|WP_060620533.1|1143423_1144467_+|CPBP-family-intramembrane-metalloprotease
MSKPMPPAQQPQVPEQPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEALRTLLGADVPAWAVLLASSGPLYVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIPVMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALFIGLLAPVCEEWIFRKEIISRLRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLNGSVLAPLVIQQIDPRILDGTNSEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLITKRKSWEFYLAPEELPAGLKIRTAYANPGVISYLLLTVILTGWMLFA
>NZ_CP010411.1|WP_060620534.1|1144505_1145303_-|mechanosensitive-ion-channel
MTEYAQDIAHWFQVNAGKLIWLAVVLAVVFAADRVISRVLRRVLDSSQIPSASIFVNLTRVTIWVTGTAMVLQPVFGINPTTLVTALGVGGVAISLGLKDTIANVIGGFGLMLGRVIQPGDLVTIQGVTGTVHDITWRQTVVRTRSGDMMVIPNSVLNTAALTKLTPASEGMSTLEFTAKASGDPSAISQDILDRVTKATADVALEGQPPLVKFTGFSPYGMTGQVLVFAREGVLPSTVRDMAARAIAGSGTKYLVEDGGSSDNL
>NZ_CP010411.1|WP_060620535.1|1145482_1146916_-|aspartate-ammonia-lyase
MSETSNKTRLEHDCIGQMQVPANVYWGIHTQRAIGNFPVSGITDSQHPELIRAYATVKRACAIANEELGLIDPDKAEAIRAACLEIEAGRLADQFPVDVMQGGAGTSSNMNMNEVIANRALEIAGHQRGDYTYIHPNDDVNESQSTNDTYPAACKLALIDAIGPLAESTKKLAKAFHDLADKHINDVTIGRTQLQDAVPMTYGQEFHSFATLLKSDLAAFDRVVPLLAQLNLGATAIGTGICADLRFRKSAIKHLAHITGLPVTAAPDPVAAMTDMGAYVATSAAIKSLAVHLKKAADDLRLLNSGPRCGFNDLNVPARQAGSSIMPAKVNPVIPECVNQCCFTIFGMDVTVNWAVAEGQLQLNAFDPVMVHELLTGMALLTRAMETFRVNCVEGIEIHVGLGRSYAQSSPSIAAALNHYIGYEHAADIAAEAVHTGRTVREVAGERTDLPAEQLDEILDPIRLARGLGQTCREHRD
>NZ_CP010411.1|WP_060620536.1|1147033_1147765_-|TetR/AcrR-family-transcriptional-regulator
MPRPRHDSEVLPAKERLENAFWELLADRDYRKITVTDVVREAGVNRNSFYYHFSSLPELADSAILHQVESIPINRTPDPNGNPEEQWRDRVTATLSDPEQRQRLDRLALLAGPHSTLELTESLRDFCRLQMLSTLQRDPKNLDLKTDLMVEFTVGGMLAVLQRWPELSDAIEIKDLLKEDVAVLAMGIYLAMSQKDMLNYWNRIFVHNAQDSAAPGMPSAATHAAPSPISPSNGPAGFPGYTA

Crispr_ID: NZ_CP010411_4

• CRISPR_ID: NZ_CP010411_4
• CRISPR_location: 1161379-1161474
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP010411_4

Consensus_repeat	Method
ACCGCCATCGCCAACGCGCAGAAG	CRISPRCasFinder

spacers of NZ_CP010411_4

>4.1|1161403|48|NZ_CP010411|CRISPRCasFinder
ACGGTCTCCAACAAGACGGCCACCATTGATGCCACGGACGGTGCCATT

CRISPR arrays and Neighbor proteins around NZ_CP010411_4

CRISPR arrays

The CRISPR arrays of NZ_CP010411_4

>merge|NZ_CP010411|4|1161379-1161474|CRISPRCasFinder
ACCGCCATCGCCAACGCGCAGAAGACGGTCTCCAACAAGACGGCCACCATTGATGCCACGGACGGTGCCATTACGGCCATCGCCAACGCGCAGAAG

>NZ_CP010411|4|4|1161379-1161474|CRISPRCasFinder
ACCGCCATCGCCAACGCGCAGAAG	ACGGTCTCCAACAAGACGGCCACCATTGATGCCACGGACGGTGCCATT
ACGGCCATCGCCAACGCGCAGAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_060620551.1|1171459_1172803_+|C1-family-peptidase	unknown	unknown	gnl|CDD|238328
NZ_CP010411.1|WP_060620546.1|1163743_1164355_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl|CDD|223813
NZ_CP010411.1|WP_007051452.1|1157441_1157636_+|50S-ribosomal-protein-L28	unknown	unknown	gnl|CDD|234736
NZ_CP010411.1|WP_060620549.1|1168075_1168951_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|133009
NZ_CP010411.1|WP_174510706.1|1157747_1160570_+|ATP-dependent-DNA-helicase-RecG	unknown	unknown	gnl|CDD|236794
NZ_CP010411.1|WP_060620548.1|1167015_1167996_+|laccase-domain-containing-protein	unknown	unknown	gnl|CDD|376831
NZ_CP010411.1|WP_060620547.1|1165267_1166914_+|U32-family-peptidase	unknown	unknown	gnl|CDD|223896
NZ_CP010411.1|WP_060620539.1|1150598_1150808_-|hypothetical-protein	unknown	unknown	gnl|CDD|223508
NZ_CP010411.1|WP_060620542.1|1154553_1155831_-|MFS-transporter	unknown	unknown	gnl|CDD|341035
NZ_CP010411.1|WP_060620550.1|1169785_1171345_+|cell-division-protein	unknown	unknown	gnl|CDD|274008
NZ_CP010411.1|WP_060620553.1|1174236_1175469_+|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|236435
NZ_CP010411.1|WP_060620540.1|1152290_1152500_-|hypothetical-protein	unknown	unknown	gnl|CDD|341035
NZ_CP010411.1|WP_012576769.1|1156054_1157071_-|sugar-kinase	unknown	unknown	gnl|CDD|238919
NZ_CP010411.1|WP_012576785.1|1168960_1169638_+|pyroglutamyl-peptidase-I	unknown	unknown	gnl|CDD|238279
NZ_CP010411.1|WP_007054783.1|1152739_1152904_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_032683232.1|1151650_1151875_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_012576781.1|1164378_1165194_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl|CDD|234581
NZ_CP010411.1|WP_060620541.1|1153464_1154535_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP010411.1|WP_164997108.1|1173019_1174108_+|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|236435
NZ_CP010411.1|WP_129558965.1|1160698_1161217_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_060620551.1|1171459_1172803_+|C1-family-peptidase	gnl|CDD|238328	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure with the active sites imbedded in the central channel. The bacterial homolog of BH, called pepC, is a cysteine aminopeptidase possessing broad specificity. Although its crystal structure has not been solved, biochemical analysis shows that pepC also forms a hexamer. .	0
NZ_CP010411.1|WP_060620546.1|1163743_1164355_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl|CDD|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	9.5545e-54
NZ_CP010411.1|WP_007051452.1|1157441_1157636_+|50S-ribosomal-protein-L28	gnl|CDD|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	7.08304e-22
NZ_CP010411.1|WP_060620549.1|1168075_1168951_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl|CDD|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	1.07168e-70
NZ_CP010411.1|WP_174510706.1|1157747_1160570_+|ATP-dependent-DNA-helicase-RecG	gnl|CDD|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	5.70613e-125
NZ_CP010411.1|WP_012576785.1|1168960_1169638_+|pyroglutamyl-peptidase-I	gnl|CDD|238279	cd00501, Peptidase_C15, Pyroglutamyl peptidase (PGP) type I, also known as pyrrolidone carboxyl peptidase (pcp) type I: Enzymes responsible for cleaving pyroglutamate (pGlu) from the N-terminal end of specialized proteins. The N-terminal pGlu protects these proteins from proteolysis by other proteases until the pGlu is removed by a PGP. PGPs are cysteine proteases with a Cys-His-Glu/Asp catalytic triad. Type I PGPs are found in a wide variety of prokaryotes and eukaryotes. It is not clear whether the functional form is a monomer, a homodimer, or a homotetramer.	4.50501e-61
NZ_CP010411.1|WP_012576769.1|1156054_1157071_-|sugar-kinase	gnl|CDD|238919	cd01944, YegV_kinase_like, YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.	2.87265e-138
NZ_CP010411.1|WP_060620539.1|1150598_1150808_-|hypothetical-protein	gnl|CDD|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	0.00783682
NZ_CP010411.1|WP_060620542.1|1154553_1155831_-|MFS-transporter	gnl|CDD|341035	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.24558e-125
NZ_CP010411.1|WP_060620550.1|1169785_1171345_+|cell-division-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	1.25252e-05
NZ_CP010411.1|WP_060620540.1|1152290_1152500_-|hypothetical-protein	gnl|CDD|341035	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.2683e-07
NZ_CP010411.1|WP_060620547.1|1165267_1166914_+|U32-family-peptidase	gnl|CDD|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.68897e-115
NZ_CP010411.1|WP_060620553.1|1174236_1175469_+|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NZ_CP010411.1|WP_060620548.1|1167015_1167996_+|laccase-domain-containing-protein	gnl|CDD|376831	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase. Laccases are multi-copper oxidoreductases able to oxidize a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms.	5.28527e-59
NZ_CP010411.1|WP_060620541.1|1153464_1154535_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.89373e-14
NZ_CP010411.1|WP_164997108.1|1173019_1174108_+|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NZ_CP010411.1|WP_012576781.1|1164378_1165194_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl|CDD|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	1.75531e-129

Protein sequences

>NZ_CP010411.1|WP_129558965.1|1160698_1161217_+|hypothetical-protein
MNRSQDAALGTGHLVALATGGVIGLGVMSMPGIGIGIIGTGLWIAALVGLGFSVIALVPQLLLNSSGEYPGGQYQQLRDTVGRYVGGVGAYLLCFLVFDIAAYALSAAQLLPVPPLVARGVAILIIAVFMARGTTWTRSLSPRPVNTCLLGQARLTTTAKSFLAVTPLQVTI
>NZ_CP010411.1|WP_174510706.1|1157747_1160570_+|ATP-dependent-DNA-helicase-RecG
MDTTLASLVTNKRRVSALKSLGIVTVGDALTYYPFRVTEPVPLRAIREAAPGQQMAFAAVIRDMRVVPMNARRGYRLEATVDDADFARSRRVPGSTARLTFFSYRKSYVDWVSMRLRAGTSVVVSGMPSEYMGQLQFTHPEILTVAPGSAGTGAGLEGYARGAASGNGAFAGSADPYASAQSAYPPAAAAPSGAALKYDADTVQEALTRVCRPRPVYHASSRISSEHIHETILGLLWMIGARTSSTPDGQLAGAGSADIVAPTTDTIAVQNGEEKSGTTAESGAEALSQSIPDVLPESVRKAKNLMHRAEAFLAIHDPASTARFKEAIETLRYEEAFVSQTSLLKARQHAHKSSAHPCPLNEALETPRASVGEAAAEPSAQPGASERGAATNLPDLPNLRDRFIASLPFTLTAGQSQVVDDIAADLERDWPMQRLLQGEVGSGKTVVALAAMLQAVGAGYQAVLVAPTQVLAEQHYETISKMVSGLALAQPGAKETDAAADVEGAMGVSSASTVSSSKVPAEIPVTLLTGGMKLAARRKALAAAASGEPGIIVATHAAFSKTFQAPHLALVVIDEQHRFGVEQRESLNAKTDDGTTPHLLVMTATPIPRTAAMTWFGDLDISWLTELPGGRKPIRTVVVNEADAATMGRMFAHIRARVDAGERAYIVCPRIDADDEENEGGSGVSSAAGSARGRAAASGSSARTAAGGRATRAAADAIGIDDPYETFDENGETVARPPLHAVAEIADRLQKLPQFQGIRFATLTGRDKDDVKTQVMADFAGGETPILVSTTVIEVGVDVKQASCIVIFDADRYGLSQLHQLRGRVGRGGTNSWAFLISRADPGSPAEQRLEVIHHSLDGAEIAQADLEFRGAGDVLGDAQSGGKSSLKLLRVVKDADMIADARTRAEQLLAADPELAGEVQLAGAVLDFTRGNETFLTSS
>NZ_CP010411.1|WP_007051452.1|1157441_1157636_+|50S-ribosomal-protein-L28
MAARCAVCGKGPQTGFTVSHSHRRTKRSFRPNLQSVRTTIDGENTRLRVCVKCLKAGKVQRVAA
>NZ_CP010411.1|WP_012576769.1|1156054_1157071_-|sugar-kinase
MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASRMGVPTEHAGILGNGLWAHFIRQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASYGAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGFLLKAGTDPAARDYTLVINPTNTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDGLGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHSLAESVKIANAAASIAIQRSLNGVPQCPDYDEAIALIGE
>NZ_CP010411.1|WP_060620542.1|1154553_1155831_-|MFS-transporter
MTDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAWGYAQTIASLVIALLMPLLGSIADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYILATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIGSTVPFIFCIALIFGGPSLFGWSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIVKNKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGRLAGRFGCKVMITAAVVAYMCIVLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASFGVLSIAVLLIVALVFLLLQKDPTRN
>NZ_CP010411.1|WP_060620541.1|1153464_1154535_+|helix-turn-helix-domain-containing-protein
MSFRANLQYLRAQRNLTQERLAMLLGVSRQAISKWESEKAYPEMDKLLMICDLFGCTLDDLVLGDVSRPAASASAAGSSNVDSSAETASPLAASSKTAGIIAPIAELAQDITGYDEHRRRFALLIAGGVAAIIAGVGIGNLFDSSNSILGATPLNDFLTFLCVCVGVIAGLAMLIPGGLSRIDFKRRHPYVEDFYTGEDRSRELRLLVIGIVGGISAILIGIAVTVYADDMLGVSDGWPNAIFLLLCASGVFGFVYCGMRYSLLNINAYNKAAEDDRKEHAGEQDFYAKLTGAVCGIIMMIATLIGLCLLFLSPAALRGDWSTGVTSMFWVAWPIGGVLCGIAATAIQLFKDYRER
>NZ_CP010411.1|WP_007054783.1|1152739_1152904_+|hypothetical-protein
MGLFDSLKNFAADNLGNVLGGDFNLGSIGDLPAVIGEHFNADQLGEINRSLATI
>NZ_CP010411.1|WP_060620540.1|1152290_1152500_-|hypothetical-protein
MISRVPRSHYCFFPKTASIIGSFLVATTTSLTGNASFGVLSIAVLLVVALVFLLLQKDPTRANVLRHRR
>NZ_CP010411.1|WP_032683232.1|1151650_1151875_+|hypothetical-protein
MVCTTLNFAEKYLLKTEVRSVAGMSGGTSDTGTDFDVDFGGEGDLGSDHATGFNRSLSADDYWAAAGYADESLY
>NZ_CP010411.1|WP_060620539.1|1150598_1150808_-|hypothetical-protein
MGTLHGHGRGNQERMTITGQLAEEAKALIGDRAEVKFLNYADVPFFNQDEEFPNPTAAVAAAFLALVAE
>NZ_CP010411.1|WP_060620546.1|1163743_1164355_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRVISGRFKGVALATPKTGTRPTTDRTKEAIFSHLDSWGVLDDARVLDLFAGTGALGIEALSRGARELVAVESSRPAAALITKTLSQLQKNRSWDASLKARVLVKKTEQVAGGFGESFDVIFIDPPYAYETAECNQLLANLAVGSATNENTVIMLERSVRSDTPTAPEGWQITESRNYGETAVFYIESADDDSDIERSDDSAA
>NZ_CP010411.1|WP_012576781.1|1164378_1165194_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDIVSVFPEYFEVMNLSLMGKAQAKGLLEIKAHNLRDWTHDVHHSVDDTPVGGGAGMVMKPEVWSECLDELLGFSRPSDSSAPSGTPVLIFPNPSAPLFTQRDATELSHADHLLFGCGRYEGYDARIPDYYRSQGVDVREYSIGDYVLNGGEVAVSVMLEAITRLMPGFMGNPDSIVEESYTGEGALLEHRQYTKPAVWRGIAVPDVLLSGDHGKVDRFRRDEALARTAEIRPDLIAALDCKALDKADRKTLMALGWEVSAAHPRRLAD
>NZ_CP010411.1|WP_060620547.1|1165267_1166914_+|U32-family-peptidase
MRIPTRKKPEVLSPAGNLRGLKTAVDYGADAVYCGGKAFGMRSAPKNLSLEDFEEGSRYAHERGARVYVTCNVLPRNNEIEAMREYVGQLKDTGVDALIVSDIGVMMMARQVAPNLELHVSTQAGVTNYQAANAFYELGARRVVLAREMDLQAVRDIRANIPDDLDIECFVHGAMCMAFSGRCLFSNYLTGRDGNHGECAQPCRWKYSIVEEKRPGQYFPIEQTENGAYLFNSQDMNMLGHLDDLIDSGATSLKIEGRAKSAYYIAAMTNAYKTAVNEYMIQRGFEDADGNVLKPFRDRVIRPGDPDFGQGTEDQVMRNADAAFAGVADEGYDRGSDTAVADSVTGSVAAERDRVTVADAADSTASGTPAGTAVEPDGMSSHARSTRRKSNTAVEQIETDWKHAAVRPAPHVELPEWLLEETDKVAHRDYSTGFYYPEHKVTQNTDRSAYFRSWLVVGEVLSWSADEDGRVTLMSRNKIEPGQQVEFLLPGERPLVFTVPETGLRDADGAPVPAINNPAHVFSMPCPHQVPINAAIRSRTKKPTLKAE
>NZ_CP010411.1|WP_060620548.1|1167015_1167996_+|laccase-domain-containing-protein
MPEYSEEILDSNSISSTDKAGRPIPVTIPIALAPGIKVVYTTRLGGLSTGDYGNLNLGGKSGDEPEAVLSNRIALAEAVQARLSLVSQVHSGVAVDVDDSFVINTPFGFDVSGTHGETDTPRVIEADGQVTAQSGIALGMFAADCLPVLLGDPVTGIIGAAHCGRRGLERGVIGATVDLMKSKGADPANIVATLGPRICGDCYEVGDEIADQFIKRFPLTKTKTRFGGAGIDIAEAAMIDLAFAGVHQVVDSMPRVHAATQYLEEDPELAELCRTDGEGLAELAERIDNISHSMCTLENPLWYSHRRAALANKTHEGRLLALIVRD
>NZ_CP010411.1|WP_060620549.1|1168075_1168951_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MTERDFDTPVETPAVQPAPAQGAKPAQTVPVVAVVLAAGFGTRFDPDNPKQLVSVGGKPIVCWSIDAFEHCDRVSDIVVVVNPKVRGEVETLVGEMGYTKVRVIIDGGDERVDSTAAALDMLATAGIPDDAKILIHDAVRPFVEQSAIDGSIDALDQFTAATVAYASTDTVLLTEDLGDLKVVKSVPDRPNTFRAQTPQSFRFATIRHAYDLAAADPDFHPTDDTRVVVDYLPDEPVAIVSGAETNLKITTLEDIPTAERIAEEILGRDPKEEARARMHALLAQAAGQMHR
>NZ_CP010411.1|WP_012576785.1|1168960_1169638_+|pyroglutamyl-peptidase-I
MRELNVVISGFDHYDGVEVNPAVEVPKAIAEQGLGVSSAPDDPLEQVAVTVHAVSIPVSFAKAWPTLKETIEATKPNIVIATGLKHAARGVMLERCATNLMDAIRPDADNVTPRREPIDPNGPAAYWTRLPLRSILNDFTDDSIPATLSSDAGTFVCNSLFYNLLNWTATQERVLGGFVSFPPVVPAHSSQHGLPLDQQIAAGRDVVREAVRYYLKPSSSDILIA
>NZ_CP010411.1|WP_060620550.1|1169785_1171345_+|cell-division-protein
MVDRFPVVLRGYDKEKVDAAFDATQESVKRAQQTLASMREQIAADDDRILQLQAQLQEEKNKKPEGNSFASLGANAQQMLASAEQTSTELLERAKQDASSIRTTAQAQAETLINNAKLDAQHIVDDANAKAASILTNANNQAESVTTSANEDAAQLRSETAKTITEQRQTVELELSNAREEHTKKMASERSTQEREIADMKAEATQQVAAMRKSANEEITKLKSDSNDQIEAALAEANKKLADVREQVSKMMTEAQRKASEIIDAAKTKGQEITDEAEVKRTSTMSQVNAEVEQIRHDIAAQQDEATKKVNELLQHLEERRVAAKQEADELVGQAKNTRDQADSYAASKREEADIQAAAIVHKAGEEADAQIEERRAAAQSELDGLSKRIADLQERESVITQRVSELRSMFSQAFSGFAFGGNAAASGQSQEAAAVASLPVVAPVPEVKPVHNEADDQPGELSGNESAADDHNETDAAPADSAAQNEQSESSEPSERQTQGEPEAPTQANPAVSEQNGE
>NZ_CP010411.1|WP_060620551.1|1171459_1172803_+|C1-family-peptidase
MSELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTTVDNGEATHQDRSGRCWLFSSLNVARFVAKRSMNLKEFEFSQNYAMYYDKLERVNYFLKDMAALVAAGEPSDSRLIQHLLADVMGDGGQWTMAMNVYKKYGAVPKDLFPETESSKNTGEMNTQLRHLLHTAVAHMYAADGDAAKIESIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHRDGEITPVEFWKKYVGPAGLEDYVCLVDDPRAEHAKGKKIGIEHLGNVAGGDATEYLNVPNQLMKDCVKRILVEQGIPVWFGADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRFGDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGYFTMSDDWFTEYVYEVAVPKAMLPEEYRKALESPATMLPAWDPMGALA
>NZ_CP010411.1|WP_164997108.1|1173019_1174108_+|3-deoxy-7-phosphoheptulonate-synthase
MGEQAVFPETVDVNIRQLDPIPAPRAFLKEQPLTDEMSELVLHSRQEIRDVLNGRDDRLLVIVGPCSIHDPKAAHEYAEKLAAVKRELEDRLVIVMRVYFEKPRTTIGWKGLINDPDLDGRFNIRKGMWLARKVLTDVLSLGLPAATEWLDPITPQYICDAISWGAIGARNTESQVHRELASGLSMPVGFKNSTDGSVKAAADSCYASGFEHHFLSINLDGRVISAETKGNPDCHLVLRGSSHGPNYDAESVRQALEDLKVSKASGPSQHGLVIDAAHGNCGKDERREAEVIEEIAERLAHGEQGITGVMMESFLVGDHQKPAPLDQLVYGQSVTDACVPWERTNELLHTLADAVTARRSAK
>NZ_CP010411.1|WP_060620553.1|1174236_1175469_+|3-deoxy-7-phosphoheptulonate-synthase
MQQQEEAAHSLRPLQVGPQPLNTPEELRAIRQAMGEGKNPLVATDVPRWEDQVGVSRIINRRVLELEPLPTPAQVLAELPLTDQAQEIVAYSRDEIRACLYGQDDRLLVIVGPCSVHDPKAALDYAHRLAKLKDELGEQLLIVMRVYFEKPRTTIGWKGLINDPDIDGSHNIRKGLLLARKTLLGVLKEGLAAATEFLEPTSPQFISDAVSWGAIGARNTESQIHRQLASGLSMPVGFKNATDGSVKAAVNGCFAAAQQHTFFGIDHLGRACAVETLGNPDCHVVLRGSIHGPNYDAESVAKAMEDVRAEMPAESAASHGLIVDCSHGNSGKDEHRQAEVVRNIASRIAAGEQGITGIMMESFIEGGNQKAAPLDQLVYGKSITDKCISWEETEALLRELAEAVATRRWH

Crispr_ID: NZ_CP010411_5

• CRISPR_ID: NZ_CP010411_5
• CRISPR_location: 1537290-1541350
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 60 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NZ_CP010411_5

Consensus_repeat	Method
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CRISPRCasFinder
NGTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CRT

spacers of NZ_CP010411_5

>5.1|1537323|34|NZ_CP010411|CRISPRCasFinder,CRT
AGGTTCGAGCTTGACCATTCGCCCAGGTTCACGT
>5.2|1537390|33|NZ_CP010411|CRISPRCasFinder,CRT
CGCGCGTCATGGGACTCGATGACGAAGGGAGAA
>5.3|1537456|35|NZ_CP010411|CRISPRCasFinder,CRT
CTCGACCAAGATCAGCCCGTCCCTATCGTTGAATT
>5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT
ATCGCACGCATGATCAGCAGCCTGCCCCTCAAGG
>5.5|1537591|34|NZ_CP010411|CRISPRCasFinder,CRT
CACTTGTCCTTGGTCTCTATGGGGTTGCCGCCGC
>5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT
AACGCTTCCTCGACCTGCTGGTCCCACCGTTCGA
>5.7|1537725|34|NZ_CP010411|CRISPRCasFinder,CRT
ATTATTTCTGAAGGGATTTTCCCGAAGAAGCGGC
>5.8|1537792|35|NZ_CP010411|CRISPRCasFinder,CRT
CCGTGTGGGGTTGGTGCGGCTCATTTGACGAGGTT
>5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT
CTCAGTAGGAATTCTGGCGTGATCGTCAAGACC
>5.10|1537926|35|NZ_CP010411|CRISPRCasFinder,CRT
GGCCAATGTGGCCAAGTCCGACGCGGCTTCGGCCA
>5.11|1537994|35|NZ_CP010411|CRISPRCasFinder,CRT
AGGACGTCCCAGCTCTTCGCGTCGGGATCGCTGTA
>5.12|1538062|33|NZ_CP010411|CRISPRCasFinder,CRT
CCATATCGCAACTGCCTTATCTATGTCAGGCGC
>5.13|1538128|35|NZ_CP010411|CRISPRCasFinder,CRT
CCAAAAATACTATATCATGATGTCCGTAAAAACAA
>5.14|1538196|37|NZ_CP010411|CRISPRCasFinder,CRT
TACAACATCCTTAACCAGATATTCAAGGCGGCGGTGG
>5.15|1538266|33|NZ_CP010411|CRISPRCasFinder,CRT
CATGTGGCGGAAACACCAACTCCGTCTCCCTCG
>5.16|1538332|36|NZ_CP010411|CRISPRCasFinder,CRT
ATTGACCCCACCATGAGTGTGGAACAACGGGTATGC
>5.17|1538401|34|NZ_CP010411|CRISPRCasFinder,CRT
ATGGACGCGTACTGCGCCTTCCACAGCATGCAAT
>5.18|1538468|33|NZ_CP010411|CRISPRCasFinder,CRT
TTCCTGTAGTTCTTGCCTTTGCCTCTGTTGATC
>5.19|1538534|35|NZ_CP010411|CRISPRCasFinder,CRT
ATCACTATGTCGCCTATGGAGACGCCCGTCACCTC
>5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT
TCGCTCTCATCGGTGGTGGTGGGCTTGGCGGACT
>5.21|1538669|34|NZ_CP010411|CRISPRCasFinder,CRT
TTCGATACGCTTCGCCTCCGAGATGATGTCCCGG
>5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT
AACAACGTCGAAAGCATCGAACAGGTGGAGGCCG
>5.23|1538803|35|NZ_CP010411|CRISPRCasFinder,CRT
TCGGCACGATGACGGCGGCCTCCTCACCGGCTTCG
>5.24|1538871|34|NZ_CP010411|CRISPRCasFinder,CRT
CAAGCGGAGCCATCCCACACCAAGGTGTCGATCA
>5.25|1538938|36|NZ_CP010411|CRISPRCasFinder,CRT
TCGCCAAACGGTTCGGCGGCACCCCCTGGGCATGGC
>5.26|1539007|35|NZ_CP010411|CRISPRCasFinder,CRT
TTTTTATAAGGCGCAATGCGCAGGAATGAATAAAA
>5.27|1539075|36|NZ_CP010411|CRISPRCasFinder,CRT
CATACCCACCGGCTCGCACAAAACCCATAGGCGAAC
>5.28|1539144|35|NZ_CP010411|CRISPRCasFinder,CRT
CAATCCGAGCGCGCTGCAGGTCATGAAGCATGAGA
>5.29|1539212|33|NZ_CP010411|CRISPRCasFinder,CRT
GCCGTCGCCGTTTTCATGGGCTTATGGCAGTGC
>5.30|1539278|34|NZ_CP010411|CRISPRCasFinder,CRT
AGGTCATGCAGCATTCTGTTGGCGCTCTCGTATC
>5.31|1539345|33|NZ_CP010411|CRISPRCasFinder,CRT
GATTCCGATTTGGATGATGTGGCGCGCACCATC
>5.32|1539411|33|NZ_CP010411|CRISPRCasFinder,CRT
TTGATGATGAACCGGCCCCGATCACTCAAGAGA
>5.33|1539477|35|NZ_CP010411|CRISPRCasFinder,CRT
ACCTGGCTGAAGGGCGCCGTCACCGGCGACCATCA
>5.34|1539545|36|NZ_CP010411|CRISPRCasFinder,CRT
CTGATGGCCGGACTGACCGACTCCTACCAGTCGCTG
>5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT
CAAAAACTCAACCAGCTCGTCCTGGAAAAATAAC
>5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT
ACCTACACGGCGTCCGGCGGCGTGATCCGCTGCC
>5.37|1539748|32|NZ_CP010411|CRISPRCasFinder,CRT
CACGTGAGACGCTATTGCCCGCAACCCGAACG
>5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT
ATCGAAAACGCCCACGCCGCAGGCATGAGCGAAC
>5.39|1539880|35|NZ_CP010411|CRISPRCasFinder,CRT
CTGGACGGACGGCGAGGTGCTCATAGACGAGGATC
>5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT
ACGATCCTCGGCAAGCGCAGGACGCTGGCCATC
>5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT
CCGCTGACCGGCGATACGGCGACGCTCGAGAGG
>5.42|1540080|36|NZ_CP010411|CRISPRCasFinder,CRT
GACGTATTCGCGTAGAAGAACCGGGCCTCGGCCTCC
>5.43|1540149|34|NZ_CP010411|CRISPRCasFinder,CRT
GTCGGCTGTCAGATACACGTGGCGTCGACGCTGT
>5.44|1540216|35|NZ_CP010411|CRISPRCasFinder,CRT
CAGTACGTGAAATGAGACATTGCCATAAGATTCGC
>5.45|1540284|33|NZ_CP010411|CRISPRCasFinder,CRT
GGAGTTGATGATGATGTTGTGGCCTATTTGGAG
>5.46|1540350|34|NZ_CP010411|CRISPRCasFinder,CRT
ATTGTCCTCATAGGAGGGTGTACGAACTACGGTA
>5.47|1540417|35|NZ_CP010411|CRISPRCasFinder,CRT
CAGAAGGTTTCGGCCTGCTCCCCTCATCACCGGAT
>5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT
TCCATGGTGGAGGTATTGCGCGCCGAGGCCGC
>5.49|1540550|33|NZ_CP010411|CRISPRCasFinder,CRT
GAATGCAACCATCGACAAGACCGGCAAACTCAC
>5.50|1540616|34|NZ_CP010411|CRISPRCasFinder,CRT
CTTCGAATGGAGAACGTGTTGGCCGATGAAGCGT
>5.51|1540683|36|NZ_CP010411|CRISPRCasFinder,CRT
ATGTCCGCAAACTGCATGGTCTGCTGGTTGCCGAGA
>5.52|1540752|36|NZ_CP010411|CRISPRCasFinder,CRT
AACCAATTATACGAGTCCGCGCGGAAAAAATTCGAC
>5.53|1540821|33|NZ_CP010411|CRISPRCasFinder,CRT
CGTTCGTTCGTGGACGAATGGGGCGGGTTGAAA
>5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT
AACGACATCGACTACCAAATCGGCATCATGCTCG
>5.55|1540954|35|NZ_CP010411|CRISPRCasFinder,CRT
ACGGTGCGCACGTCCGTGGGGTCGCCGTTCTGATA
>5.56|1541022|35|NZ_CP010411|CRISPRCasFinder,CRT
TGGAACTGTACGCCGACCCGACAAGCAAATACCAT
>5.57|1541090|32|NZ_CP010411|CRT
GGCATGACGTGCCAGCCACATTCGCGGCGGAT
>5.58|1541155|32|NZ_CP010411|CRT
CTGAAAGGCGACAGCCTGTACATAGCCGGCGA
>5.59|1541220|32|NZ_CP010411|CRT
CTGAAAGGCGACAGCCTGTACATAGCCGGCGA
>5.60|1541285|33|NZ_CP010411|CRT
TGCACCGCACTGGGGTTATCGAATGGTAACGCA

CRISPR arrays and Neighbor proteins around NZ_CP010411_5

CRISPR arrays

The CRISPR arrays of NZ_CP010411_5

>merge|NZ_CP010411|5|1537290-1541350|CRISPRCasFinder,CRT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAATAGGTTCGAGCTTGACCATTCGCCCAGGTTCACGTGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCGCGCGTCATGGGACTCGATGACGAAGGGAGAAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCTCGACCAAGATCAGCCCGTCCCTATCGTTGAATTGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATCGCACGCATGATCAGCAGCCTGCCCCTCAAGGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCACTTGTCCTTGGTCTCTATGGGGTTGCCGCCGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAACGCTTCCTCGACCTGCTGGTCCCACCGTTCGAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATTATTTCTGAAGGGATTTTCCCGAAGAAGCGGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCCGTGTGGGGTTGGTGCGGCTCATTTGACGAGGTTGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCTCAGTAGGAATTCTGGCGTGATCGTCAAGACCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGGCCAATGTGGCCAAGTCCGACGCGGCTTCGGCCAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAGGACGTCCCAGCTCTTCGCGTCGGGATCGCTGTAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCCATATCGCAACTGCCTTATCTATGTCAGGCGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCCAAAAATACTATATCATGATGTCCGTAAAAACAAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTACAACATCCTTAACCAGATATTCAAGGCGGCGGTGGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCATGTGGCGGAAACACCAACTCCGTCTCCCTCGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATTGACCCCACCATGAGTGTGGAACAACGGGTATGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATGGACGCGTACTGCGCCTTCCACAGCATGCAATGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTTCCTGTAGTTCTTGCCTTTGCCTCTGTTGATCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATCACTATGTCGCCTATGGAGACGCCCGTCACCTCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTCGCTCTCATCGGTGGTGGTGGGCTTGGCGGACTGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTTCGATACGCTTCGCCTCCGAGATGATGTCCCGGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAACAACGTCGAAAGCATCGAACAGGTGGAGGCCGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTCGGCACGATGACGGCGGCCTCCTCACCGGCTTCGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCAAGCGGAGCCATCCCACACCAAGGTGTCGATCAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTCGCCAAACGGTTCGGCGGCACCCCCTGGGCATGGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTTTTTATAAGGCGCAATGCGCAGGAATGAATAAAAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCATACCCACCGGCTCGCACAAAACCCATAGGCGAACGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCAATCCGAGCGCGCTGCAGGTCATGAAGCATGAGAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGCCGTCGCCGTTTTCATGGGCTTATGGCAGTGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAGGTCATGCAGCATTCTGTTGGCGCTCTCGTATCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGATTCCGATTTGGATGATGTGGCGCGCACCATCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTTGATGATGAACCGGCCCCGATCACTCAAGAGAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATACCTGGCTGAAGGGCGCCGTCACCGGCGACCATCAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCTGATGGCCGGACTGACCGACTCCTACCAGTCGCTGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCAAAAACTCAACCAGCTCGTCCTGGAAAAATAACGTCGCACCCCTCACGGGGTGCGTGGATTGAAATACCTACACGGCGTCCGGCGGCGTGATCCGCTGCCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCACGTGAGACGCTATTGCCCGCAACCCGAACGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATCGAAAACGCCCACGCCGCAGGCATGAGCGAACGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCTGGACGGACGGCGAGGTGCTCATAGACGAGGATCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATACGATCCTCGGCAAGCGCAGGACGCTGGCCATCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCCGCTGACCGGCGATACGGCGACGCTCGAGAGGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGACGTATTCGCGTAGAAGAACCGGGCCTCGGCCTCCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGTCGGCTGTCAGATACACGTGGCGTCGACGCTGTGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCAGTACGTGAAATGAGACATTGCCATAAGATTCGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGGAGTTGATGATGATGTTGTGGCCTATTTGGAGGTCGCACCCCTCACGGGGTGCGTGGATTGAAATATTGTCCTCATAGGAGGGTGTACGAACTACGGTAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCAGAAGGTTTCGGCCTGCTCCCCTCATCACCGGATGTCGCACCCCTCACGGGGTGCGTGGATTGAAATTCCATGGTGGAGGTATTGCGCGCCGAGGCCGCGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGAATGCAACCATCGACAAGACCGGCAAACTCACGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCTTCGAATGGAGAACGTGTTGGCCGATGAAGCGTGTCGCACCCCTTACGGGGTGCGTGGATTGAAATATGTCCGCAAACTGCATGGTCTGCTGGTTGCCGAGAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAACCAATTATACGAGTCCGCGCGGAAAAAATTCGACGTCGCACCCCTCACGGGGTGCGTGGATTGAAATCGTTCGTTCGTGGACGAATGGGGCGGGTTGAAAGTCGCACCCCTCACGGGGTGCGTGGATTGAAATAACGACATCGACTACCAAATCGGCATCATGCTCGGTCGCACCCCTCACGGGGCGCGTGGATTGAAATACGGTGCGCACGTCCGTGGGGTCGCCGTTCTGATAGTCGCACCCCTCACGGGGCGCGTGGATTGAAATTGGAACTGTACGCCGACCCGACAAGCAAATACCATGTCGCACCCCTCACGGGGTGCGTGGATTGAAATGGCATGACGTGCCAGCCACATTCGCGGCGGATGGTCGCACTCCACTGGGGTGCGTGGATTGAAATCTGAAAGGCGACAGCCTGTACATAGCCGGCGAAGTCGCACTCCACTGGGGTGCGTGGATTGAAATCTGAAAGGCGACAGCCTGTACATAGCCGGCGAAGTCGCACCCCACTGGGGTGCGTGGATTGAAATTGCACCGCACTGGGGTTATCGAATGGTAACGCATGTCGCACCTCACTGGGGTGCGTGGATTGAAAT

>NZ_CP010411|5|5|1537290-1541089|CRISPRCasFinder
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGTTCGAGCTTGACCATTCGCCCAGGTTCACGT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CGCGCGTCATGGGACTCGATGACGAAGGGAGAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTCGACCAAGATCAGCCCGTCCCTATCGTTGAATT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCGCACGCATGATCAGCAGCCTGCCCCTCAAGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CACTTGTCCTTGGTCTCTATGGGGTTGCCGCCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACGCTTCCTCGACCTGCTGGTCCCACCGTTCGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTATTTCTGAAGGGATTTTCCCGAAGAAGCGGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCGTGTGGGGTTGGTGCGGCTCATTTGACGAGGTT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTCAGTAGGAATTCTGGCGTGATCGTCAAGACC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GGCCAATGTGGCCAAGTCCGACGCGGCTTCGGCCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGACGTCCCAGCTCTTCGCGTCGGGATCGCTGTA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCATATCGCAACTGCCTTATCTATGTCAGGCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCAAAAATACTATATCATGATGTCCGTAAAAACAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TACAACATCCTTAACCAGATATTCAAGGCGGCGGTGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CATGTGGCGGAAACACCAACTCCGTCTCCCTCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTGACCCCACCATGAGTGTGGAACAACGGGTATGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATGGACGCGTACTGCGCCTTCCACAGCATGCAAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTCCTGTAGTTCTTGCCTTTGCCTCTGTTGATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCACTATGTCGCCTATGGAGACGCCCGTCACCTC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGCTCTCATCGGTGGTGGTGGGCTTGGCGGACT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTCGATACGCTTCGCCTCCGAGATGATGTCCCGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACAACGTCGAAAGCATCGAACAGGTGGAGGCCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGGCACGATGACGGCGGCCTCCTCACCGGCTTCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAAGCGGAGCCATCCCACACCAAGGTGTCGATCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGCCAAACGGTTCGGCGGCACCCCCTGGGCATGGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTTTTATAAGGCGCAATGCGCAGGAATGAATAAAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CATACCCACCGGCTCGCACAAAACCCATAGGCGAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAATCCGAGCGCGCTGCAGGTCATGAAGCATGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GCCGTCGCCGTTTTCATGGGCTTATGGCAGTGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGTCATGCAGCATTCTGTTGGCGCTCTCGTATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GATTCCGATTTGGATGATGTGGCGCGCACCATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTGATGATGAACCGGCCCCGATCACTCAAGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACCTGGCTGAAGGGCGCCGTCACCGGCGACCATCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTGATGGCCGGACTGACCGACTCCTACCAGTCGCTG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAAAAACTCAACCAGCTCGTCCTGGAAAAATAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACCTACACGGCGTCCGGCGGCGTGATCCGCTGCC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CACGTGAGACGCTATTGCCCGCAACCCGAACG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCGAAAACGCCCACGCCGCAGGCATGAGCGAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTGGACGGACGGCGAGGTGCTCATAGACGAGGATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACGATCCTCGGCAAGCGCAGGACGCTGGCCATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCGCTGACCGGCGATACGGCGACGCTCGAGAGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GACGTATTCGCGTAGAAGAACCGGGCCTCGGCCTCC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GTCGGCTGTCAGATACACGTGGCGTCGACGCTGT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAGTACGTGAAATGAGACATTGCCATAAGATTCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GGAGTTGATGATGATGTTGTGGCCTATTTGGAG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTGTCCTCATAGGAGGGTGTACGAACTACGGTA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAGAAGGTTTCGGCCTGCTCCCCTCATCACCGGAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCCATGGTGGAGGTATTGCGCGCCGAGGCCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GAATGCAACCATCGACAAGACCGGCAAACTCAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTTCGAATGGAGAACGTGTTGGCCGATGAAGCGT
GTCGCACCCCTTACGGGGTGCGTGGATTGAAAT	ATGTCCGCAAACTGCATGGTCTGCTGGTTGCCGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACCAATTATACGAGTCCGCGCGGAAAAAATTCGAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CGTTCGTTCGTGGACGAATGGGGCGGGTTGAAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACGACATCGACTACCAAATCGGCATCATGCTCG
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT	ACGGTGCGCACGTCCGTGGGGTCGCCGTTCTGATA
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT	TGGAACTGTACGCCGACCCGACAAGCAAATACCAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT

>NZ_CP010411|5|1|1537290-1541350|CRT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGTTCGAGCTTGACCATTCGCCCAGGTTCACGT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CGCGCGTCATGGGACTCGATGACGAAGGGAGAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTCGACCAAGATCAGCCCGTCCCTATCGTTGAATT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCGCACGCATGATCAGCAGCCTGCCCCTCAAGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CACTTGTCCTTGGTCTCTATGGGGTTGCCGCCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACGCTTCCTCGACCTGCTGGTCCCACCGTTCGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTATTTCTGAAGGGATTTTCCCGAAGAAGCGGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCGTGTGGGGTTGGTGCGGCTCATTTGACGAGGTT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTCAGTAGGAATTCTGGCGTGATCGTCAAGACC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GGCCAATGTGGCCAAGTCCGACGCGGCTTCGGCCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGACGTCCCAGCTCTTCGCGTCGGGATCGCTGTA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCATATCGCAACTGCCTTATCTATGTCAGGCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCAAAAATACTATATCATGATGTCCGTAAAAACAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TACAACATCCTTAACCAGATATTCAAGGCGGCGGTGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CATGTGGCGGAAACACCAACTCCGTCTCCCTCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTGACCCCACCATGAGTGTGGAACAACGGGTATGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATGGACGCGTACTGCGCCTTCCACAGCATGCAAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTCCTGTAGTTCTTGCCTTTGCCTCTGTTGATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCACTATGTCGCCTATGGAGACGCCCGTCACCTC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGCTCTCATCGGTGGTGGTGGGCTTGGCGGACT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTCGATACGCTTCGCCTCCGAGATGATGTCCCGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACAACGTCGAAAGCATCGAACAGGTGGAGGCCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGGCACGATGACGGCGGCCTCCTCACCGGCTTCG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAAGCGGAGCCATCCCACACCAAGGTGTCGATCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCGCCAAACGGTTCGGCGGCACCCCCTGGGCATGGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTTTTATAAGGCGCAATGCGCAGGAATGAATAAAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CATACCCACCGGCTCGCACAAAACCCATAGGCGAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAATCCGAGCGCGCTGCAGGTCATGAAGCATGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GCCGTCGCCGTTTTCATGGGCTTATGGCAGTGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AGGTCATGCAGCATTCTGTTGGCGCTCTCGTATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GATTCCGATTTGGATGATGTGGCGCGCACCATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TTGATGATGAACCGGCCCCGATCACTCAAGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACCTGGCTGAAGGGCGCCGTCACCGGCGACCATCA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTGATGGCCGGACTGACCGACTCCTACCAGTCGCTG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAAAAACTCAACCAGCTCGTCCTGGAAAAATAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACCTACACGGCGTCCGGCGGCGTGATCCGCTGCC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CACGTGAGACGCTATTGCCCGCAACCCGAACG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATCGAAAACGCCCACGCCGCAGGCATGAGCGAAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTGGACGGACGGCGAGGTGCTCATAGACGAGGATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ACGATCCTCGGCAAGCGCAGGACGCTGGCCATC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CCGCTGACCGGCGATACGGCGACGCTCGAGAGG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GACGTATTCGCGTAGAAGAACCGGGCCTCGGCCTCC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GTCGGCTGTCAGATACACGTGGCGTCGACGCTGT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAGTACGTGAAATGAGACATTGCCATAAGATTCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GGAGTTGATGATGATGTTGTGGCCTATTTGGAG
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	ATTGTCCTCATAGGAGGGTGTACGAACTACGGTA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CAGAAGGTTTCGGCCTGCTCCCCTCATCACCGGAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	TCCATGGTGGAGGTATTGCGCGCCGAGGCCGC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GAATGCAACCATCGACAAGACCGGCAAACTCAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CTTCGAATGGAGAACGTGTTGGCCGATGAAGCGT
GTCGCACCCCTTACGGGGTGCGTGGATTGAAAT	ATGTCCGCAAACTGCATGGTCTGCTGGTTGCCGAGA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACCAATTATACGAGTCCGCGCGGAAAAAATTCGAC
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	CGTTCGTTCGTGGACGAATGGGGCGGGTTGAAA
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	AACGACATCGACTACCAAATCGGCATCATGCTCG
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT	ACGGTGCGCACGTCCGTGGGGTCGCCGTTCTGATA
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT	TGGAACTGTACGCCGACCCGACAAGCAAATACCAT
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT	GGCATGACGTGCCAGCCACATTCGCGGCGGAT
GGTCGCACTCCACTGGGGTGCGTGGATTGAAAT	CTGAAAGGCGACAGCCTGTACATAGCCGGCGA
AGTCGCACTCCACTGGGGTGCGTGGATTGAAAT	CTGAAAGGCGACAGCCTGTACATAGCCGGCGA
AGTCGCACCCCACTGGGGTGCGTGGATTGAAAT	TGCACCGCACTGGGGTTATCGAATGGTAACGCA
TGTCGCACCTCACTGGGGTGCGTGGATTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_032743922.1|1536730_1537021_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP010411.1|WP_060620749.1|1542799_1543234_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_164997111.1|1550214_1550403_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620752.1|1549834_1550218_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620741.1|1526558_1526906_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_015439067.1|1531348_1532053_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187782
NZ_CP010411.1|WP_060620742.1|1526902_1527688_+|ATP-binding-protein	unknown	unknown	gnl|CDD|181681
NZ_CP010411.1|WP_060620754.1|1550538_1552086_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|369540
NZ_CP010411.1|WP_129559014.1|1528003_1528225_+|transposase	unknown	unknown	gnl|CDD|376574
NZ_CP010411.1|WP_060620748.1|1542082_1542619_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_029679662.1|1547484_1548921_-|adenylosuccinate-lyase	unknown	unknown	gnl|CDD|236452
NZ_CP010411.1|WP_007053170.1|1544364_1544646_-|HU-family-DNA-binding-protein	unknown	unknown	gnl|CDD|259859
NZ_CP010411.1|WP_060620744.1|1532055_1534014_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|378245
NZ_CP010411.1|WP_060621597.1|1541803_1541992_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_014484099.1|1534017_1534869_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|187820
NZ_CP010411.1|WP_032745394.1|1544800_1547362_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NZ_CP010411.1|WP_060620743.1|1528903_1531342_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP010411.1|WP_060620746.1|1535599_1536631_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP010411.1|WP_060620751.1|1549054_1549699_+|ECF-transporter-S-component	unknown	unknown	gnl|CDD|378252
NZ_CP010411.1|WP_060620745.1|1534907_1535603_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|273040

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP010411.1|WP_032743922.1|1536730_1537021_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.7e-26	87.0	0.3
NZ_CP010411.1|WP_060620744.1|1532055_1534014_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	2.3e-96	318.2	0.2
NZ_CP010411.1|WP_015439067.1|1531348_1532053_+|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	6.8e-59	193.8	0.0
NZ_CP010411.1|WP_014484099.1|1534017_1534869_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	4.1e-95	312.9	0.8
NZ_CP010411.1|WP_060620743.1|1528903_1531342_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	6.6e-56	184.6	0.1
NZ_CP010411.1|WP_060620746.1|1535599_1536631_+|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	4.1e-138	454.8	0.0
NZ_CP010411.1|WP_060620745.1|1534907_1535603_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	2.4e-32	107.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_032743922.1|1536730_1537021_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.1716e-27
NZ_CP010411.1|WP_015439067.1|1531348_1532053_+|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.78462e-83
NZ_CP010411.1|WP_007053170.1|1544364_1544646_-|HU-family-DNA-binding-protein	gnl|CDD|259859	cd14435, SPO1_TF1_like, Bacteriophage SPO1-encoded TF1 binds and bends DNA. This group contains proteins related to bacillus phage SPO1-encoded transcription factor 1 (TF1), a type II DNA-binding protein related to the DNA sequence specific (IHF) and non-specific (HU) domains. Type II DNA-binding proteins bind and bend DNA as dimers. Like IHF, TF1 binds DNA specifically and bends DNA sharply. Bacteriophage SPO1-encoded TF1 recognizes SPO1 phage DNA containing 5-(hydroxymethyl)-2'-deoxyuridine as opposed to thymine, Related family members includes integration host factor (IHF) and HU, also called type II DNA-binding proteins (DNABII), which are small dimeric proteins that specifically bind the DNA minor groove, inducing large bends in the DNA and serving as architectural factors in a variety of cellular processes such as recombination, initiation of replication/transcription and gene regulation. IHF binds DNA in a sequence specific manner while HU displays little or no sequence preference. IHF homologs are usually heterodimers, while HU homologs are typically homodimers (except HU heterodimers from E. coli and other enterobacteria). HU is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups).	1.96266e-38
NZ_CP010411.1|WP_129559014.1|1528003_1528225_+|transposase	gnl|CDD|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.6509e-14
NZ_CP010411.1|WP_060620742.1|1526902_1527688_+|ATP-binding-protein	gnl|CDD|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	1.05645e-54
NZ_CP010411.1|WP_060620754.1|1550538_1552086_-|alpha/beta-fold-hydrolase	gnl|CDD|369540	pfam07819, PGAP1, PGAP1-like protein. The sequences found in this family are similar to PGAP1. This is an endoplasmic reticulum membrane protein with a catalytic serine containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body.	0.000661669
NZ_CP010411.1|WP_029679662.1|1547484_1548921_-|adenylosuccinate-lyase	gnl|CDD|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP010411.1|WP_060620744.1|1532055_1534014_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.05326e-87
NZ_CP010411.1|WP_014484099.1|1534017_1534869_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.89068e-107
NZ_CP010411.1|WP_032745394.1|1544800_1547362_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	2.11553e-20
NZ_CP010411.1|WP_060620743.1|1528903_1531342_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.21714e-48
NZ_CP010411.1|WP_060620746.1|1535599_1536631_+|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.55288e-178
NZ_CP010411.1|WP_060620751.1|1549054_1549699_+|ECF-transporter-S-component	gnl|CDD|378252	pfam09819, ABC_cobalt, ABC-type cobalt transport system, permease component. Members of this family of prokaryotic proteins include various hypothetical proteins as well as ABC-type cobalt transport systems.	1.0463e-33
NZ_CP010411.1|WP_060620745.1|1534907_1535603_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	4.08186e-32

Protein sequences

>NZ_CP010411.1|WP_032743922.1|1536730_1537021_+|CRISPR-associated-endonuclease-Cas2
MMVVVAYDVSTETPEGRRRLRNVAKICMRYGQRVQNSVFECSVSPSDYLILKHDLAAVMDESQDSLRYYNLGAKYSSKIEYRGRQRHMPVDGVMML
>NZ_CP010411.1|WP_060620746.1|1535599_1536631_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKQLLNTLYVTSEDAYLSLKNDNVIVQQGDDTLGRIPLRSLESVVSFSYKGASPALMGRCSEFGVGLSFFSPHGRYYCSILGENNRNVLLRREQFRFADDDGAALLFARSFIIGKIYNSRWVLERTKRDHALRINSKRIADQSEKLRQSLLGVRDCTSIDGLRGVEGLAAKDYFFVFDDLILRNKDAFFFEQRSRRPPLDRANALMSFVYSILTSDCIAALQGVGLDPYVGFLHTDRPGRASLALDLVEEFRPALADRFVLTLINTGAVKPSQFEVRENGGVFLSESGRKTVLAAWQKRKQETITHPFFNEKMPWGLVPHVQALLLSRVIRGDLDAYPPFMWK
>NZ_CP010411.1|WP_060620745.1|1534907_1535603_+|CRISPR-associated-protein-Cas4
MKEPTDYPEDDWLALSGLQHFAFCRRQWALIHIEQQWQDNYLTTAGSLEHDRAHDYSASEARGDLLIMRDLRVFSRRLGITGACDIVEFRQSDAGVPLHGRAGTWLPYPVEYKHGAPKQADADRLQLCAEAMCLEEMLACSIPEGALFYQQTKHRERVRLDESLRDQIVAMSGEMHDLFARGHTPNVKPSKSCRACSLRDICLPKLAGSRSAKQFIDEVMRAEAAGQENRT
>NZ_CP010411.1|WP_014484099.1|1534017_1534869_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTSLQHKIDFVLTFAVENANPNGDPLNGNRPRTTAEGLGEMSDVAEKRKIRNRLQDAGERIFVQSTDRTDDGEKSLSDRWKAFTKTLSKEDQKDREALSYRACEQWIDVRSFGQVFAFKGKEKEGDASVSIPVRGPFTIQSAFSLEPIAIDDVQITKSVNGETTDTNKKSSDTMGMKHRVSGRAVYVTHGSISPQLAEKTGFTEKDAEKIKEALLTLFENDESSARPAGSMEVVNLAWFTHNSKAGQYSSAKVHRTAKVDEEGVITVDTTHIPGLHYEVLEGR
>NZ_CP010411.1|WP_060620744.1|1532055_1534014_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSLWSSLLQTYDAVNSSAGITPLNEDVNKTLLPLYHTTLKTQLQVTLDENGYPTIKRDNADIEIIAPCTEQSMGRSGKVLPPHPLFDQLQYIDTNYDPVKHESYLSQLASWKGDNAKLNAIYQYLSQHSVIEEARAQGIGIDPKKDSKIGVRFAVHVRHGDYEPNVWADHAIRDLWIAHEEQVRHGASLGTDLFGETLYKPSTNFPKKIVNVNGNAKLISANDNTYFTFRGRFANRDEALSIDTLTSQKIYTTLRWLAANNGTLTGSQDIVIWAIDGHPTDNVLDPTGNSRDVAEQVDDRTDSEKLIDANVQTYANYAKQFGKLLRGYGNEKVLQQMQQHSRRIVVAIFDAATSGRLSVTFYRELSQNEYIESVLQWHEDAAWYLTCFDNKNSASTDDEAPRGSKKSSDKPKPIPYIGAPSFADVINCVYSTDDHSSDSYRHFAKYVKKQLVECMFSNAGLPASLLQPAFHKVIRPLSYDSLSVWQHDFEVACSMWKKYYIDQDKKTPLDERNNITMDLDEKRTDRDYLFGQLLALADNYEYRVLLRQSGGRIPDRTTNAVKLMNNFVAKPSTTWLTLRQQLNPYIISSTNGMFFQNEVDEVMSKFKEGDFESNKPLSSLFLLGYSHKRKQLIQRADAAKQLKEQNIENKGE
>NZ_CP010411.1|WP_015439067.1|1531348_1532053_+|type-I-C-CRISPR-associated-protein-Cas5
MEKHRNSIEYVIYGDYALFSEVATRTGGEKNSYQIPTYQALKGITESIYWKPTIVWVIDAVRVMNKIQTEGKGIRPIKMSGGNDLSYYTYLKKVKYQVLAHFEWNEQREDLRVDRNENKHHNIAKRSVNLGGRRDIFLGTRECQGYVEPCEFGSGEGFYDGYGDWQFGFEFHSFIYPDENPEHDFIAQFWRPIMHDGIIQFERPDSTQLDQRIIRRNQHVKDFIEGRNFSMAEE
>NZ_CP010411.1|WP_060620743.1|1528903_1531342_+|CRISPR-associated-helicase/endonuclease-Cas3
MVHALMPKDLLLARKDDDGNTQTLYDHLHNTAELAAGFEKRSSVTAFAAGLLHDSGKATDDFKRYLLTGNRKRGEVVHAKQGAFIVDDCAADFPSSAASMITAEVLELAIANHHGHLPDCLDACGGTAYFRKLTGENKKAEQYHYQEVLSHVSSLNLDINTNFANSVAETNRLLETVDSCGISPRNTRNSRSFFLGLYAKYIYSRLVDADRVDAANFTAHQPYTSQTPNWEELTRRLENAISGFDTSSKISKIRMRISENCLAASTRDTGIYRLGVPTGGGKTLASLRFALHHAQETGKHHIIYITPYLSITEQTVQVFRNVLDLDKDDEILLEHYSSVVPDKDDEKEQQRRLAAERWDKPIIVTTMVQFLETVMSAKATRLRKFHNLADSVIVFDEVQALPTNTINVFNEVVSFLSKILGSTILLCSATQPLLEQTDRRNLLLSDKPDLIDPDNDYAEQLRRTNIVASSQGLTLDDFAAEIYSKALDNGNCLAVVNLKGEAKQLYQLVKELDVDHRFTLVHLSTAMCGAHRKNQLAVLKKCLPKKTGDSGQPVICISTQLIEAGVDISFSCVIRAMAGLDSILQAAGRCNRNGESQMPRNVYVYPTKDESGLRYLPEIQLGKEITDQLIHDYPEQDLLSAFMIEEYYRAYLIRYPKLVDSKSRNIGTMDYSILGGEETVYDLLSFNRRRRGLYCNRVGEQYPYAFAQAFQTVGDKFHVIPGGTTDVVVHYGQAMELIDQLNGEGDFASKIKILRSLQEYTVSLFDYEFKALDKSKSISEENGDFGILVLNEENYSQDFGFLLKAEMPLLMK
>NZ_CP010411.1|WP_129559014.1|1528003_1528225_+|transposase
MEEFSRLGEKIDRRRFDILRTIRSGLSNARLEAVNNKIKTTIKIGYGYRNLGNLIALVMLKCGGLNLQLPGRQ
>NZ_CP010411.1|WP_060620742.1|1526902_1527688_+|ATP-binding-protein
MSRRPDPRIPETRRRRAGTIAKSERVMAMSRHLTLTRGVLADHLAQATPARLDFIESWFEAEPASREQSKRARLLKAAGFPNAKGLDGYDWSNLRMPPDWGRVQLESLEFVGKSEDLVLYGPVGTGKSHLAVAPGRLACMNAMPVRFFTASGLLMRLRRAKQENRLDGGLAAIGKARLLIIDEFGHMPVDEEGSRLLFQAVSDSYETRSIIYTTNIEFSGWGRVLGDKNMAAALIDRTVHHGRLIRFEGRSYRSEHALMTK
>NZ_CP010411.1|WP_060620741.1|1526558_1526906_+|hypothetical-protein
MLAARPGSWRETPIRPDFPEDVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDSIGLRPDARPADTDLVSLALRHRDGDWDEARDQGPDLTGYDRFITGTGPEGKEETR
>NZ_CP010411.1|WP_060621597.1|1541803_1541992_+|hypothetical-protein
MSITNNQRELILKWHRGKASSPEYTAKLLSVPLDEVLYIIAHPETPAPHKDDSTPEFIEPLL
>NZ_CP010411.1|WP_060620748.1|1542082_1542619_+|hypothetical-protein
MSIVIEPCQYCGSQQVEAPWTLCQDCRHTYAKVLHQLSHNMHLLQRDTRHEYKLGEPGSGGKPQGGEAPAPVNMHAIDLLDEAESLLQDAWYDAGAVWSDRWQRLIRRMQTRLAWLCQACNAGRFLRQLIHMSQRIMPLIDRMPRTRRIIPVARTTRSRRIIPAREQETMLVPHPTAA
>NZ_CP010411.1|WP_060620749.1|1542799_1543234_-|hypothetical-protein
MASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVAPTTAKAGNAIKFSKPEGKQAASVSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPESKTVIFDVANATAGTMKRRGRKKAA
>NZ_CP010411.1|WP_007053170.1|1544364_1544646_-|HU-family-DNA-binding-protein
MAYNKSDLVSKIAQKSNLTKAQAEAAVNAFQDVFVEAMKSGEGLKLTGLFSAERVKRAARTGRNPRTGEQIDIPASYGVRISAGSLLKKAVTE
>NZ_CP010411.1|WP_032745394.1|1544800_1547362_-|flippase-like-domain-containing-protein
MTTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIAPRRTRDFGDLTRASLSLLMAAVVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLTQLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWVISTAISSLNDSALPMALVSAATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVSMAAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDDDLAEGSRIYDVETSNNRRFIVSVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQHHFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMPANLNTLTQADAVAYMRYLSVANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKPAVAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESAEPVTLARFSWRSMITMLLVIVAVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIGSSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPAFVNLQFLRRSGYRNTPATAIMSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHWVTRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIETTFVFMLAYALGSAVPTPGGLGGVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLGAAAMKWLDRHNLV
>NZ_CP010411.1|WP_029679662.1|1547484_1548921_-|adenylosuccinate-lyase
MKLTDISPAIALTPLDGRYHKATAPLVEYMSEPALNRERMRVEVEWMILLANGFEGNGNQPIVDGVKPFTAEEQAFLRAIPEDFGAEGIKQHAAHEAITHHDVKAVEYYIDDQIDKAPAELANINDELKTLVHFACTSEDINNLSIARCVKNAMENVWTPEFKRIIDHLAGKAEEFKDMPLLSLTHGQPATPTTLGKELAVYVYRLNRQLKHIENQEYLGKINGATGTFGAHLAACPDVDWVAVSREFVTNRMGLTWNPLTTQIESHDWQAELYSTVSHANRIMHNLCVDVWMYISRGVFAQVPVKGATGSSTMPHKVNPIRFENAEANFEISCSLLDTLSATLVESRWQRDLTDSTTQRNIGSALGYSLLALTNLMGGLESIHPNTHVIERELDENWEVLGEPIQTAMRACELKGLPGMDKPYEKVKELMRGHTINKEQVEQFIDQQSFDPETAARLKALTPATYTGVASQLVAFDR
>NZ_CP010411.1|WP_060620751.1|1549054_1549699_+|ECF-transporter-S-component
MPETVNIHTLPKRPVAVSSLKWQPLDIAVGATLGAACGVIFWGFNFAYMPISSVFGAILPGFASIVHAVWYFSGTLAVLILRKPGAALYVNLIGTLVETVIGSQFDLGFVIVSALLQGVFAELPFAATRYRMFNLPISIASGALVALEYGTYLMLFRYVGVSFVSPRGIVHMISEITGGVLISGVMAWYLMLAIAKTGVLDRLASGRALIEQRA
>NZ_CP010411.1|WP_060620752.1|1549834_1550218_-|hypothetical-protein
MKTYQVIVRPGEKYWILEIPGIGFTQARTTAEIESMARDLITVMTQDADFALTIETKLPQSVQEHLDEARRLRKEEAECRSNAARETRAAAQELHGMGLALQQIGDILGVSRQRAHQLVNAVNAVNA
>NZ_CP010411.1|WP_164997111.1|1550214_1550403_-|hypothetical-protein
MKQAAKRKNVTFESIRQGGNHEIFQLDGLMIPIPRHNEIDNNLADIICKEAEAKLGKGWYQQ
>NZ_CP010411.1|WP_060620754.1|1550538_1552086_-|alpha/beta-fold-hydrolase
MSEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRHSAPMCVTLQSGDPSAVVPGHVTAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLYSQAEMTARRMFTELLQAGTQAKPGYAAVGVAAVAAGGFLAGWAIDGKPNPAWMSTFTYPFQEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANADVVRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDGQPDSPFGWAQNVELMSADQERRRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAATLASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDELVAALDGSANPVTDNWLTVQGHVSPAPEATPSTVHSDGSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQNATDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT

Crispr_ID: NZ_CP010411_6

• CRISPR_ID: NZ_CP010411_6
• CRISPR_location: 1716227-1716383
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP010411_6

Consensus_repeat	Method
GAGCGTACCCGCTCCGAGGCCGACG	CRISPRCasFinder

spacers of NZ_CP010411_6

>6.1|1716252|41|NZ_CP010411|CRISPRCasFinder
ACTACTCCACTCGTACTCGTTCCGATGCCGACACCTATTCG
>6.2|1716318|41|NZ_CP010411|CRISPRCasFinder
CTTACCGTGACCAGACTCACGCGGATGCCGAGACCTACTCC

CRISPR arrays and Neighbor proteins around NZ_CP010411_6

CRISPR arrays

The CRISPR arrays of NZ_CP010411_6

>merge|NZ_CP010411|6|1716227-1716383|CRISPRCasFinder
GAGCGTACCCGCTCCGAGGCCGACGACTACTCCACTCGTACTCGTTCCGATGCCGACACCTATTCGGATCGTACCCGCTCCGAGGCCGACGCTTACCGTGACCAGACTCACGCGGATGCCGAGACCTACTCCCAGAACACCCGTTCTGAGGCCGACG

>NZ_CP010411|6|6|1716227-1716383|CRISPRCasFinder
GAGCGTACCCGCTCCGAGGCCGACG	ACTACTCCACTCGTACTCGTTCCGATGCCGACACCTATTCG
GATCGTACCCGCTCCGAGGCCGACG	CTTACCGTGACCAGACTCACGCGGATGCCGAGACCTACTCC
CAGAACACCCGTTCTGAGGCCGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_129558978.1|1719696_1721898_-|hypothetical-protein	unknown	unknown	gnl|CDD|273736
NZ_CP010411.1|WP_013141017.1|1710175_1711648_+|glycine--tRNA-ligase	unknown	unknown	gnl|CDD|235240
NZ_CP010411.1|WP_060620836.1|1708795_1709740_-|hydroxyethylthiazole-kinase	unknown	unknown	gnl|CDD|238575
NZ_CP010411.1|WP_060620845.1|1724736_1725537_+|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl|CDD|377085
NZ_CP010411.1|WP_060620837.1|1714911_1715214_+|YggT-family-protein	unknown	unknown	gnl|CDD|376765
NZ_CP010411.1|WP_060620833.1|1703704_1704514_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|369938
NZ_CP010411.1|WP_082248078.1|1711739_1712984_+|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl|CDD|129820
NZ_CP010411.1|WP_060620841.1|1718988_1719639_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP010411.1|WP_060620835.1|1705959_1708713_-|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl|CDD|236451
NZ_CP010411.1|WP_060620840.1|1717302_1718265_+|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NZ_CP010411.1|WP_060620832.1|1703263_1703641_-|thiamine-binding-protein	unknown	unknown	gnl|CDD|376658
NZ_CP010411.1|WP_060620843.1|1721977_1722274_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_032738027.1|1729857_1731735_+|oleate-hydratase	unknown	unknown	gnl|CDD|237575
NZ_CP010411.1|WP_060620844.1|1723014_1724100_-|IS30-family-transposase	unknown	unknown	gnl|CDD|225382
NZ_CP010411.1|WP_032745305.1|1713095_1714298_+|cell-division-protein-FtsZ	unknown	unknown	gnl|CDD|236468
NZ_CP010411.1|WP_060620846.1|1725571_1729129_+|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl|CDD|235554
NZ_CP010411.1|WP_007053330.1|1729241_1729652_+|DUF4186-domain-containing-protein	unknown	unknown	gnl|CDD|372733
NZ_CP010411.1|WP_032745304.1|1714310_1714790_+|cell-division-protein-SepF	unknown	unknown	gnl|CDD|377370
NZ_CP010411.1|WP_060620839.1|1716754_1717306_+|signal-peptidase-II	unknown	unknown	gnl|CDD|184816
NZ_CP010411.1|WP_060620834.1|1704641_1705850_+|26S-protease-regulatory-subunit	unknown	unknown	gnl|CDD|224143

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_129558978.1|1719696_1721898_-|hypothetical-protein	gnl|CDD|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	1.48763e-14
NZ_CP010411.1|WP_013141017.1|1710175_1711648_+|glycine--tRNA-ligase	gnl|CDD|235240	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional.	0
NZ_CP010411.1|WP_060620836.1|1708795_1709740_-|hydroxyethylthiazole-kinase	gnl|CDD|238575	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.	1.49853e-85
NZ_CP010411.1|WP_060620845.1|1724736_1725537_+|YihY/virulence-factor-BrkB-family-protein	gnl|CDD|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	1.43214e-24
NZ_CP010411.1|WP_060620837.1|1714911_1715214_+|YggT-family-protein	gnl|CDD|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	8.47374e-05
NZ_CP010411.1|WP_060620833.1|1703704_1704514_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|369938	pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine kinase. This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes.	1.61371e-124
NZ_CP010411.1|WP_082248078.1|1711739_1712984_+|tRNA-dihydrouridine-synthase-DusB	gnl|CDD|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	1.3369e-118
NZ_CP010411.1|WP_060620841.1|1718988_1719639_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.25624e-84
NZ_CP010411.1|WP_060620835.1|1705959_1708713_-|phosphomethylpyrimidine-synthase-ThiC	gnl|CDD|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP010411.1|WP_060620840.1|1717302_1718265_+|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	3.28331e-93
NZ_CP010411.1|WP_060620832.1|1703263_1703641_-|thiamine-binding-protein	gnl|CDD|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	1.67924e-26
NZ_CP010411.1|WP_032738027.1|1729857_1731735_+|oleate-hydratase	gnl|CDD|237575	PRK13977, PRK13977, myosin-cross-reactive antigen; Provisional.	0
NZ_CP010411.1|WP_060620844.1|1723014_1724100_-|IS30-family-transposase	gnl|CDD|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	3.77684e-61
NZ_CP010411.1|WP_032745305.1|1713095_1714298_+|cell-division-protein-FtsZ	gnl|CDD|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NZ_CP010411.1|WP_060620846.1|1725571_1729129_+|DNA-polymerase-III-subunit-alpha	gnl|CDD|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP010411.1|WP_007053330.1|1729241_1729652_+|DUF4186-domain-containing-protein	gnl|CDD|372733	pfam13811, DUF4186, Domain of unknown function (DUF4186).	2.92277e-65
NZ_CP010411.1|WP_032745304.1|1714310_1714790_+|cell-division-protein-SepF	gnl|CDD|377370	pfam04472, SepF, Cell division protein SepF. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This family also includes archaeal related proteins of unknown function.	1.49367e-25
NZ_CP010411.1|WP_060620839.1|1716754_1717306_+|signal-peptidase-II	gnl|CDD|184816	PRK14771, PRK14771, lipoprotein signal peptidase; Provisional.	7.73444e-102
NZ_CP010411.1|WP_060620834.1|1704641_1705850_+|26S-protease-regulatory-subunit	gnl|CDD|224143	COG1222, RPT1, ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones].	2.30772e-74

Protein sequences

>NZ_CP010411.1|WP_060620837.1|1714911_1715214_+|YggT-family-protein
MLSLVFSLIGRILAWLINAYITVLFVRMILDWVSIFARNWYPRGVVAQLINIVYSITEPPLRWLRRYIRPLPLGPIYLDVSFIVLYLALVVLESVVLIVF
>NZ_CP010411.1|WP_032745304.1|1714310_1714790_+|cell-division-protein-SepF
MAGFMKNAMSYLGMSDVVDDEDDYIEEDEEQKPAPKSAFDSDHTVTPLASTTAPAASSTTKPFPGGRVNRITTIHPKSYEDAQLVGRALRDGVPVVLNLTDVAEAVAYRIVDFSAGVVFGVRGSLERVTPRVFLLSPAQVNIKVEETTKPASAHDLFAD
>NZ_CP010411.1|WP_032745305.1|1713095_1714298_+|cell-division-protein-FtsZ
MSEIAQNEFNDKTNIKVVGVGGAGGNAVNRMIAEGLQNVEFVAVNTDAKDLLRSDADVKISLSDQSSRGLGAGADPEKGAKAAQDHQSDIEESLKGADMVFVTCGEGGGTGTGASPIVARAAHQQGALTIAVVTRPFSFEGPQRSASAEYGIDNLRKEVDALIVIPNDRLLELSDRSIGIIEAFKTADTALLAGVQGITDLISMNSYIHVDFSDVNSILRGAGTALFGIGSARGEDRATQAAEIAISSPLLEESIEGAHGALINIAGPTDLKLQEASAATELVRKAIHPEAQIIWGLALDDAYGDEVRVTVIAAGFDPVTPQDPSAAAPAIAVPAAQPAATQTQQPAAAPAAQPVATPRPEFTPTTADPASLPFDDPTTSHPDIAVNDPAGDLDIPDFLR
>NZ_CP010411.1|WP_082248078.1|1711739_1712984_+|tRNA-dihydrouridine-synthase-DusB
MAESETETTITATHETNNLDPRTDAPARPETPVHIAPVQLGNITVPTPVVLSPMAGVTNWPFRVICEEYGPDGLYVAEMITARALVARNPKALRLCHFARSEKIRSLQLYGVNPSITEQAAKIVVDGNMADHVDLNFGCPVPKVTRRGGGSALPWKTDIFTELIQRVVAVCEPAGIPVTSKIRVGIDHNHETFLEAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELKEHLNIPVFGNGDIWGAEDALEMVRETGCDGVAIGRGCQGRPWLFANIKNAFEGNPERLNPNLGEVCRVIHRHAELLTEFYEGDEMMAVHDLRKHIAWYLKGFPVGGSTRKAFMECESLADVDREIGKLDPTIEYPPRVVDKPRGRVRFAKKVHLPYGWLESRTTTHEEREALFGDDPMDASY
>NZ_CP010411.1|WP_013141017.1|1710175_1711648_+|glycine--tRNA-ligase
MAQSKLDEVVSLAKRRGFVFPAGEIYGGTRSAWDYGPLGVALKDNIKREWWRSMVVTRPDVVGVDTSIILPPEVWVASGHVSVFNDPLVECLNCHKRNRADKLEESYAEKHGDKMPENGMKDIVCPNCGTRGQWTEPRDFNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPGNFIFRTREFEQMEMEFFVTPGTDEEWHQYWIDARTRWYIDLGVKPENLRHYEHPKEKLSHYSKRTVDIEYKFGFQGSDWGELEGIANRTDFDLSAHSKHSGEDLSYFNQATGEKYVPYVIEPAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPLSKKPELQTVAQNLADDLRFNEWMIDYDESGAIGRRYRRQDEIGTPLCITVDFDTLEDHAVTIRERDTMAQERIALDKVADYVAARIGEKRTRVPLKPVEMGGEPWPESGVQEAGGLY
>NZ_CP010411.1|WP_060620836.1|1708795_1709740_-|hydroxyethylthiazole-kinase
MSNSASSFTGMSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANAQLAAGGTAAMSFLPDDVIETAKIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDPVAAGIGRTRTAILQAFKAAPPTMIRANASEVIALANMWGLNTETVGDTSEHRPAGVESVDDVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMTKITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAGEIADTTSHGPGSFQVAFLDALWNVTAEQVAESEIFVQ
>NZ_CP010411.1|WP_060620835.1|1705959_1708713_-|phosphomethylpyrimidine-synthase-ThiC
MSNEYPYASMRDSFDLSAYFVVGPEDCKGRPLTDVVDQALHGGATFIQLRAKEADASELTDMARDIAQIIEDNEKSDSVAFVIDDRADVVWQARRKGIKVDGVHIGQTDMEPREARALLGDEAIVGLSAETESLVQLINELPDGCIDYIGAGPLHVSTTKPEASVGGNDGSGKTLDAAQINTICVASEFPVVVGGGVTAADMAMLAGTKAAGWFAVSAIAGAENPEEAARAMVEGWKAIRGDKKHGYAPRVVTHTPAADTQAAQEGAAKPGSEATEKKFTNAKDAKDAQKLAKQQRVDIAARGSKQRDKAHIRKTKSVPFTYQYGSYDLEVPYTEIKLSDTPGVGPNPPFHDYNTEGPKCDPKEGLKPLRLDWIRDRGDIEDYEGRRRNLEDDGKRAIKRGRATKEWRGRKHQPMRAKDHPITQMWYARHGIVTPEMQYVATRENCDVELVRSELAAGRAVMPCNINHPEAEPMIIGSAFLTKLNANMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRVTGIVSRGGSIMADWCLRHHQESFLYTHFDELCDIFAKYDVAFSLGDGLRPGSLADANDAAQLSELMTLGELTERAWAKDVQVMIEGPGHVPFDTVRMNIELEKSVCKGAPFYTLGPLTTDTAPGYDHITSAIGATEIGRYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPHAMDRDNAISKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMAISQNIRKAFGGEAAQQQIVKEAAAGIDSEALAKAKDNVDNGVVSANVLSPEEILAGMDAMSEKYTAQGGKLYSTAQE
>NZ_CP010411.1|WP_060620834.1|1704641_1705850_+|26S-protease-regulatory-subunit
MADNDVLRRDGVLVRITGFDDERTAYFGVMPNGRTTQLTFPRQEVFDVGDVLLVGTDFYRKVPHDVWPLKPRVGIVRRALNEGVVLETSDGLELLEGDYPTSIMPGNTVQFTDLFGIERVLWPTAIRPGESDHDDDIKQYRITPGSDPSLTFDSFGGYEQVITRAKELIETQLGNSAQMRAIGAKPIKGVIFTGAPGTGKTHLARIIANVADAQFYLVSGPTIVSKYVGDSEETLRMIFAAAQADKRAIIFFDEIDSIASSRENDTNGVGKRLVAQLLTLMDGFESKGNVVVVAATNRIEDVDPALLRPGRFDWQIPFPMPSEHDRLGILQVQARSLSIEGELPLVDIAQRTEGWSGAEVCAIWTEAALVAAKDRRGAIRAGDLVTAFERVGRRPEFRRHRA
>NZ_CP010411.1|WP_060620833.1|1703704_1704514_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MAQIATSTLPAVLAISGSDSSGGAGMQADLKTMLACGVFGMSAITALTAQNTTGVRSIQDTKPDILADQINMVFEDIPPVAVKIGMVSATDIINVIAERLTFHHATNIVLDPVMVATSGAKLISDDAIAALTGKLFPMATVVTPNIPEAEVLTDTLIRDQEDMEAAAHRIVERYGCAALVKGGHGTEDANDVLAETDGTVTWFDGARINNPNTHGTGCTLSSAIASYLALGDTLPKAIKHAKKYLTGALKAQLNLGHGSGPMDHLWKYR
>NZ_CP010411.1|WP_060620832.1|1703263_1703641_-|thiamine-binding-protein
MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQETNALFTNVEGNLDDVLKVAGEAAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILADKQAK
>NZ_CP010411.1|WP_060620839.1|1716754_1717306_+|signal-peptidase-II
MTNQQGRLRTRVAVFACVAAAALIVDQLTKAWAMAALSNGQTIRVIPGLLSFTLVRNPGASLGMGSGATWVISLLAVVACVALAVAGVRTVSMKWSVALSFAFAGALGNLIDRVMYADGFLNGKVVDFLNYGWSVGNVADIYLVVAGVVLVILILMGEPFSHKDLIEQSDESLQSGPEADAKQ
>NZ_CP010411.1|WP_060620840.1|1717302_1718265_+|RluA-family-pseudouridine-synthase
MSRMVPAPDALVGKRFDVAVAKMLGISRSKAADLVDSGQARVLGREVARSSTLQAGETVEFDLAEEQAGPEPIATDMAVVYEDGDVVVVDKPVGVAAHASVGWTGPTVLGSLRDRGVHIASYGAAGREGIVSRLDVGTSGLMLVCKSDLAYTEMRRQFAEHEVKKTYHALVQGGLKENKATIEAPIGRAKVSDFRFCVTPAGKPAVTHWDVLERFGHEATLVSVNLETGRTHQIRVHFSSIGHPLCGDPMYGANPVLSEALGLDRQWLHAMKLEFRHPRTRVWTTVRSQYPADLAAALDAMRARHIEPAEPAEHTEVLVD
>NZ_CP010411.1|WP_060620841.1|1718988_1719639_-|ABC-transporter-ATP-binding-protein
MNTKLAADHLCKTYGSRTILRDLSFSVEEGTSMAITGPSGSGKSTLLNIIGLLDTPTGGAITLDGQPLPGIDGRRATMLRRGKINYLFQSYALINDMSALDNVTLGMRFTRDSKQVRQRKAKAMLSRLGLGHVAGDKIMTLSGGEQQRVALARCILKPGDLILADEPTGALDRDLAQHVFDEMLRLQHEYGKTLIIVTHDLGIAAQCDNTIELQAV
>NZ_CP010411.1|WP_129558978.1|1719696_1721898_-|hypothetical-protein
MHRWLRWSSCLVIVVMAMLSGMLSLFALGDGYMAAVRAYPLQGRALSLSDVPQERSSRTLNALMSGVEEAHAVVVRSDVLVSPVDGSVEGYRLGVYGDVGAHSDEVTFRYQGVDVLDLDLLSRLLRSDADATLGLDRVSADMIASLPAARFGGRLVVVRLDTLERLSGTVNGDYRIIGLDDTGFRALAQRVSEASGIDADRLTSPLHGSSTEDSFMRMIALALLAVAAVALVLLLVLGAFQEFSRLGVYLLLGWSRLGYAVRIYRPLMVCAFVSMVVPFAVTLWGMEGFPVTVQLVVTGLMPGAMVVGIVLAASALGALVLLSVRPVAAIRNRVSKKALLAVIAVVYVLASAGLVAGAHALDAPMNEVSKLGQVNARWGRYDSLRLLYKDSRGTNHTESSGTSGDHMREVYDWYTSIEGRDGVYIANTRHFDAGLLAQWKGLYEQVPEQEFWYFIVSPNYLKDQGFDLDQDTVARAKAGERMFLIPNTMDAAEQERIRGYLTETSMKYKDWNSNIHTTFMDTGKIGFATYHPSTPLFTWSDDLSQPAETTDPVILVATGADMTPFEAESLGATGLTNSYIKLGETAARQYTTPEYLAEYRLEDNNPIYRPASDFIAGLRKSLTEFIQLFGGIALLAALFQLIGMATLCRVYAVTYRETIAVKRLLGYSLTGIFAPAFVMVAVVSAISILATVLLGSTAGSIAAAATFVFQLILLAVQSRTLSSGQVQVMIKSE
>NZ_CP010411.1|WP_060620843.1|1721977_1722274_-|hypothetical-protein
MFDKIKKPVAAVLLTVTVLFGGAGMAFADTVYYKNTAVYWDYGRWLGVWSYSTVQSSFYEHQATANSEVSGWKLPGEKAEAKAFVGTGQAQAYWACRG
>NZ_CP010411.1|WP_060620844.1|1723014_1724100_-|IS30-family-transposase
MGEACSRLSEEERRVIRIEIGNGTSIRRIGLMLGRNASTVGREIKRNTWFPSNENESCRPYRPYRPKRLKTGPWTGGCYIAGPARRKAGRRRAEPRRRYRLSCERLWARVAEWLGCGWSPLLISGGLRVLFPDDSAMRVCPETVCRWIHADRHRRERWARCLPRGHGRRRRRGGGRTSRFPIPGRVPISERPPEAGDRSGFGHWEADGVIGVGCNPRTEVERKTRFLMAGIVPGKTAWEGVGARLAMFSPLPAGARGGVTHDNGAGFACHTRLRDGPGMDTYFADPYSSRRRGSNENGNGMIRRYPPERGEIRMDMAGELREIVDEADNRPMRVLDYRTPAEAFADELLELQDQQGCCTSK
>NZ_CP010411.1|WP_060620845.1|1724736_1725537_+|YihY/virulence-factor-BrkB-family-protein
MLDRYVSRRGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPGVADSFLTSSALNTMSSTLTWTGLATLAIFWWTVTGWMNSLRHAVRSMFDDCGDELNIVVARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVALNFALFMLLLRVVSHIKAGRFTIFGALLGSLTVSAMQLLGARLLAGASRNPMLAPFAALVGVLIWFNLVAQVIMLCAALIAECRREC
>NZ_CP010411.1|WP_060620846.1|1725571_1729129_+|DNA-polymerase-III-subunit-alpha
MADYGNNFVQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMYTNCVANGVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEGLVNLIKASSVANLEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALRAAGEFQDIFGKDNFFIELMDHGLPIETQVTGDLLTIAKKLNAPLLATNDSHYVHAEDAQAQDAMLCINSGSRLDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFDDHEDGAFMPKFPCPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFCGYFLVVADYIQWAKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVSLPDIDVDFDPEGRARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEKVTKALPPAATGGKDISLHDIFDPTAKRYAEAREFRELYDSDPDAKRITEEAKGIEGLIRQTGVHACATIMGSAPITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDTLKNIEANGKPAIDYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDISALIALYRPGPMSMDSHTNYAKRKNGLQEITPIHPELEEPLKQVLDETYGLIIYQEQVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLSPDVNESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTALNRRLVESLIKAGAFDSIDPNRRALLTVHEAAIDSVVSLKRKQAEGQFDLFSDDEDGGAEAMGDASVTVPDLEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRAKTMGEGQQVTLAGLVTNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAAAAELAVDAIVQIRGQVELRDETVSLRATEMQIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHPGYCEVHLAVLDEKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
>NZ_CP010411.1|WP_007053330.1|1729241_1729652_+|DUF4186-domain-containing-protein
MGMEMADTGNNDDEQQWIATMLERLSHSQFRAKFALTDKDRAYARTKGKATIDRHAREMLRDRIGAAEPKNDGRQTPWRGHPVFTAQHATATCCRGCIEKWHHLPKGRELAEAEVNRLADLVMAWIERDLINHPVR
>NZ_CP010411.1|WP_032738027.1|1729857_1731735_+|oleate-hydratase
MYYSSGNYEAFARPKKPADVDNKHAYIIGTGLAALSAACYLVRDGQMPGENIHILEKDPVPGGACDGLDIPGLGYVMRGGREMDNHFEVMWDLFRSIPSIETEGVSVLDEYYWLNKEDPNYSLCRATKNLGKDAGLKGKFGLSDKASMEIMKLFFTPDEDLYDKPITDFFDDEVLNSNFWLYWRTMFAFENWHSALEMKLYIKRYIHHIGGLPDFSALRFTRYNQYESMILPMVKYLESHGVEFRYNTKVENVEFAIGGGAGPKREHTGVGQDTIQKIQATSGFFKRNPASTPTKKLAVRIDVDHEGNKSSIDLTENDLVFITNGGCVENSTMGSQNSPAAWNPDLKPGGGWDMWKRIADQDPSFGHPEKFCSDPNATKWMSATVTTLDGEIPPYIQKICKRDPFSGKVVTGGIVTVQDSNWLMSWTLNRQQQFRDQPKDQLCVWVYGLFPDKPGNYVKKPMTECTGEEICEEWLYHMGVPTDKIEALAKHHANTVPVMMPYITAFFMPRAAGDRPDVVPDGAVNFAFLGQFAETPRDTIFTTEYSMRTGMEAVYTLLGVDRGVPEVWGSVYDVRNLLNATVKLRDGAPVTDMKLNFIEKAVVKKVLKKLDGTDIATLLREYHVI

Crispr_ID: NZ_CP010411_7

• CRISPR_ID: NZ_CP010411_7
• CRISPR_location: 1827591-1827671
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP010411_7

Consensus_repeat	Method
ATATGAGACGGCTTCACTGTGCG	CRISPRCasFinder

spacers of NZ_CP010411_7

>7.1|1827614|35|NZ_CP010411|CRISPRCasFinder
TGGCTGCAGGTAGAGACTGCCCGCGCGGCGGCGAC

CRISPR arrays and Neighbor proteins around NZ_CP010411_7

CRISPR arrays

The CRISPR arrays of NZ_CP010411_7

>merge|NZ_CP010411|7|1827591-1827671|CRISPRCasFinder
ATATGAGACGGCTTCACTGTGCGTGGCTGCAGGTAGAGACTGCCCGCGCGGCGGCGACATATGAGACGGTTTCACTGTGCG

>NZ_CP010411|7|7|1827591-1827671|CRISPRCasFinder
ATATGAGACGGCTTCACTGTGCG	TGGCTGCAGGTAGAGACTGCCCGCGCGGCGGCGAC
ATATGAGACGGTTTCACTGTGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_007055266.1|1833384_1834380_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379214
NZ_CP010411.1|WP_007054435.1|1836981_1837302_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060620882.1|1836193_1836982_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NZ_CP010411.1|WP_007057381.1|1815015_1815828_+|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|179028
NZ_CP010411.1|WP_060620878.1|1817446_1819081_+|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173884
NZ_CP010411.1|WP_060620881.1|1834501_1836055_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl|CDD|234660
NZ_CP010411.1|WP_060620879.1|1823933_1825535_-|aminopeptidase-P-family-protein	unknown	unknown	gnl|CDD|238520
NZ_CP010411.1|WP_060620880.1|1829588_1833266_+|chromosome-segregation-protein-SMC	unknown	unknown	gnl|CDD|274008
NZ_CP010411.1|WP_007057256.1|1825838_1826690_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_013140948.1|1823269_1823791_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240032
NZ_CP010411.1|WP_082248083.1|1839863_1840877_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl|CDD|234893
NZ_CP010411.1|WP_060620884.1|1838636_1839593_-|aldose-1-epimerase-family-protein	unknown	unknown	gnl|CDD|185699
NZ_CP010411.1|WP_060620883.1|1837567_1838512_-|aldose-1-epimerase-family-protein	unknown	unknown	gnl|CDD|185699
NZ_CP010411.1|WP_007054423.1|1813553_1814678_-|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NZ_CP010411.1|WP_041081007.1|1827944_1829528_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl|CDD|223362
NZ_CP010411.1|WP_029679435.1|1840916_1841426_-|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl|CDD|237976
NZ_CP010411.1|WP_007052566.1|1819244_1820336_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP010411.1|WP_007052568.1|1821510_1823220_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224048
NZ_CP010411.1|WP_007052567.1|1820337_1821507_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP010411.1|WP_060620877.1|1815883_1817167_+|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl|CDD|238434

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_007055266.1|1833384_1834380_-|GNAT-family-N-acetyltransferase	gnl|CDD|379214	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions.	6.65289e-09
NZ_CP010411.1|WP_060620882.1|1836193_1836982_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	2.78368e-71
NZ_CP010411.1|WP_007057381.1|1815015_1815828_+|glucosamine-6-phosphate-deaminase	gnl|CDD|179028	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.	1.91719e-125
NZ_CP010411.1|WP_060620878.1|1817446_1819081_+|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173884	cd08519, PBP2_NikA_DppA_OppA_like_20, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP010411.1|WP_060620881.1|1834501_1836055_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	2.37017e-148
NZ_CP010411.1|WP_060620879.1|1823933_1825535_-|aminopeptidase-P-family-protein	gnl|CDD|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	1.34817e-106
NZ_CP010411.1|WP_060620880.1|1829588_1833266_+|chromosome-segregation-protein-SMC	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP010411.1|WP_060620883.1|1837567_1838512_-|aldose-1-epimerase-family-protein	gnl|CDD|185699	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	3.42189e-131
NZ_CP010411.1|WP_013140948.1|1823269_1823791_-|NUDIX-domain-containing-protein	gnl|CDD|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.25115e-55
NZ_CP010411.1|WP_082248083.1|1839863_1840877_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl|CDD|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	3.73913e-161
NZ_CP010411.1|WP_060620884.1|1838636_1839593_-|aldose-1-epimerase-family-protein	gnl|CDD|185699	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	1.32974e-124
NZ_CP010411.1|WP_007054423.1|1813553_1814678_-|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.3133e-37
NZ_CP010411.1|WP_041081007.1|1827944_1829528_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl|CDD|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	1.1464e-129
NZ_CP010411.1|WP_029679435.1|1840916_1841426_-|Cys-tRNA(Pro)-deacylase	gnl|CDD|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	2.0188e-75
NZ_CP010411.1|WP_007052566.1|1819244_1820336_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.77009e-104
NZ_CP010411.1|WP_007052568.1|1821510_1823220_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP010411.1|WP_007052567.1|1820337_1821507_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.94335e-82
NZ_CP010411.1|WP_060620877.1|1815883_1817167_+|N-acetylglucosamine-6-phosphate-deacetylase	gnl|CDD|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	2.91522e-145

Protein sequences

>NZ_CP010411.1|WP_007057256.1|1825838_1826690_-|hypothetical-protein
MYDGIPSLYANTAYWDGLTPPERTLHIARALAQEHPQWVFGGLVAVSAYGFEHQWHLHDDCITIVTSDHGSRQCHQRLRHVYMPDMNNPKTHYEASGLSLISPARTLVEAAIDLDFRFALPIFDSALAKGITKEEIAADCVQWRIDYARVFRLLRYANERSENGGESLARGTIIEDRFLTPRIQVTVTDPQTNTEYRVDFVWKLDDGRVIVAEYDGTQKYVDPAMTDNRSIQEVVAKERARDEGLKRAGATEIVHFTYADVIERTPLRVKLIKAGVPQVETSA
>NZ_CP010411.1|WP_060620879.1|1823933_1825535_-|aminopeptidase-P-family-protein
MGEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKPLESSKFTPARLEALGKAFPGERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAGAVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFMSAHYGEYWVGPRAGLKEMQAMTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPQITSMVESIRKANGFADPDKNSASDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPAALDKPRSERILEGAFNAVSRELGNAVGYDSIVASGPHAPILHWMRNTGVVKTGDMLLVDAGVEVDSLYTADITRTFPTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAERLHDWGLLPVSVEESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARYESYQGAKITPGMIFTIEPGLYFREDDLLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKQIDDVEAWMRSRKAISPVD
>NZ_CP010411.1|WP_013140948.1|1823269_1823791_-|NUDIX-domain-containing-protein
MPTPEFVLELRKKIGHDLLWLNGVTGCVLNEHGQLLLGRRSDTGEWAMVYGINEPGEQPADTVVREIKEETGIDAIVTDLVAVTSSNKVLTYANGDNTMYMDHSFLCALKPGGNAEPFVGDEESLSVGWFDLDDLPTPLAASTSERLELFHTYIENKKHGDAHALFQFDGQQY
>NZ_CP010411.1|WP_007052568.1|1821510_1823220_+|ABC-transporter-ATP-binding-protein
MSENNKNLADIKDLSVSFMTDAGSIKAVEDVNFTIPRKTVVGVVGESGSGKSVTARSIIKLLPETATTSGAVYLSKRDGSDSLDVLSLSGEQLREVRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGMKDKKELRAKAINILKKVGIPDAETRVDYYPHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQVVVMYRGHVVEQGDVEQIFYHPKDDYTKRLLGAVPRIGQKLVVRDREGKPIERKADWREQPIAVEAKNLTITYPGHLMQPDFKAVDGANFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGIEMNGVKERDFKPKRADIGFVFQDPGSSFNPLMTIAENVAEPLLVHHKYGSVADAKNYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARGLALKPSLLIADEPTSALDVSVQAKVLELFKRLQAEIGFACLFITHDLAVVDMLADRIMVMHKGQIVEHGDADQIMQHPENPYTKKLLASLPVPDPREQQQHRAHLHELLAQEA
>NZ_CP010411.1|WP_007052567.1|1820337_1821507_+|ABC-transporter-permease
MTTASQDKITVPGDDRLTKLNVSTKTPFWTKIPIIKELRVAVGWQKGMLITGLAITAFFLLVALFAPLIAPYGHAQIKAADGTSFPAQAAPSAEHIWGTTAAGFDVFSRVVWGARTAVIAIVVAVLLSIFAGVLLGLVSGYYGGWVDRILVMIADAVYSFPSLLLAILMAIMISHGQSGLWSGILASGISITVVYIPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLFKNSTRTLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGIAIVLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPNEKPTARNEVIAELDANVDPPATVTDHDPTIVASEWTGEGKPEGKE
>NZ_CP010411.1|WP_007052566.1|1819244_1820336_+|ABC-transporter-permease
MSDSAIATSSTTPAKAKTKKNRLSGSFFRFVLTRFLLIIPTVFILVTIVFFVMRATGDPISAALGGRLTPAELQQRIHAAGYDRPLIVQYVDYLGGLLHGDLGTTLTDNQPVISILTHYGAATFELAFLALIVALIVGIGLGRLAARKRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAVWLNILPASGRSDLNSEMQFTRLVSPTGFYIIDAIQLGDMNVLVDVLRHAVLPAVALGLLTAGVFIRLVRTNVISTYNSGYVEAARSRGVSEKRLLNKHAWRPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAIIVAVVNFLVDVIAALIDPRVRY
>NZ_CP010411.1|WP_060620878.1|1817446_1819081_+|peptide-ABC-transporter-substrate-binding-protein
MNSKKILAAAVSVAAIASLTACGGVKDDTTAGADSGNAITIGTTDKITSLDPAGSYDNGSYAVQIQVFPFLYAQDYNTSELSPDIAADDGTWNDDGTEFTVKLKDGLKFANGNDLTASDVKFSYDRIKKINDPNGPSSLLANVESVTAKDDTTVVFKGSVPFDVTLKQVMSSPAGPIVDEDTFDADKLTDADAIVSKKAFAGPYTLTAFKINESAAYAKNDSYKGLTPAKNSAVQVKYFADASNLKMAVQQGQIDVANRSLSPTDIEDLSKDSKVKVVKGPGGEERFIAFNFKIQPYGESQPDADANKAKAVRQAVANLIDREELSTKVYKGTYTPMYSFIPDGLAGHDDTLKSAYGDGNGKPSTEKAKKVLADAGVTTPVDLKLQYNNDHYGSVSADEYAALKSQLEAGGLFKVDMQSTEWTQYNKDRVVTDDSDGVYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEVNDLIVKQAGEKDESARGDILKQIQKLETEDLSTIPLLQGAQVAVTGTSVKGVTLDASFRFRYASVTKG
>NZ_CP010411.1|WP_060620877.1|1815883_1817167_+|N-acetylglucosamine-6-phosphate-deacetylase
MSDRNEIVSRVTAALEGKPAPVAIRNARKVDARGERRGYWVVSDAAGVIVAAGTGEGAFEHCCRTVGLDPADRNAVIDAEGRILTPGYVDIHAHGAWEKSFDDGPDGIDVARAGHAVHGTTRQVLSLITNPVDVICRNIRTVRAKMESGRPDILGCHLEGPFLALARKGAHDPECLKDPVPDIVDKMLEASGADPASGKLGCIRQITIAPELPHGISAIRQFAAAGVVPAVGHCDADYETAKAGFDAGAGIMTHMFNAMNGLHHREPGPIPAAVEDPRVTIELINDGFHVQDPMVSLSFRFAPHRTAFVTDAMAATDCPDGAYKLGALDVNVVGGHARLVSNGAIAGSTLLLEVAVRRAVCELGFSPVDAVEAATLTPAKAFGFDRPNPVTGAPIGLIAPGFAADFNLADPADWTVEQVWCAGRKLK
>NZ_CP010411.1|WP_007057381.1|1815015_1815828_+|glucosamine-6-phosphate-deaminase
MPEIIIVKNEAEAGEIYGRCVADLIKAKPDAVLGLATGSSPLAAYQALAKIVKDEAIDVSGVRGFALDEYIGLPLTHPESYHATIHRTVVEPLGLDPAKVHVPGDVLNGTPLEDGDKIALAGPAYDRAIEAAGGIDVQILGIGTDGHVGFNEPGSSLASGTRVKTLAEQTRIDNARFFDNDINQVPTHCITQGIGTIMKARHLVLLAFGAGKAEAIEETVEGGVSAFCPASALQMHPHATIIVDEEAASRLRHKDYYRYAYTHKPAWQGI
>NZ_CP010411.1|WP_007054423.1|1813553_1814678_-|ROK-family-transcriptional-regulator
MSYLGLNTTTDDHAAKASPADVRRKNRQLIFRLLFPTNQYSRAELGRRTGLSRVAVSDVVGRMLEEGLLRETGQAPSGGKGKRGTLLSIDIDRLRIISIDLTQEHLLHGAVTNLLGQPLRHAEVTLNTGSFVSVDVIIELIEKMLGMSDGEVIGIGVASPGVVDNGVVRSSTMRGWNNLDLSTPIAEHFGLEVNVSNDATAAMLTERFFGQGGPNMLFVRIERGIGSAILLSDTPVIGELHAAGELGHISIDLDGPLCPCGKHGCLETMISGTALKKQLSAADVEQHQGILARAGRYLGQALSMPVGLLDMADVCVYGQPNIINETFIDAAQQYLDAATSSSFHKHTVIRRCECGPDITVQGEAIAVVFQHLAK
>NZ_CP010411.1|WP_041081007.1|1827944_1829528_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTNGKGSTARMAEAICRAYGMRTGLYTSPHLEKINERIAIDGQQLSDDDFIDIWDQTKDLVALVDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVGMGGLWDATNVLSADAAIIGPVDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILAEAAERNHAMLVRDGYEMTASDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALAASEVVIPVNGPLDGDLVAEALSSVKIPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMMRDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAVDVFGRDRVIKEANLPDAIQTAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDSDQPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTDDSADAR
>NZ_CP010411.1|WP_060620880.1|1829588_1833266_+|chromosome-segregation-protein-SMC
MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSMEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDIDYTEVTISRTIFRNGGSEYAINGSQCRLLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERALRKLANTETNLSRLDDLLGEIHRQLGPLGRQARISRRADAIQISVRDAQARLYAEDAQRSMSRRDTVRQELGDVRNQLAVAQRELAQVKVRIEQVEALSSESSPAIAKANQYWHEFSQTRERLNALAQLAEERSRSLAGQIVTNFGEDPGMLVKRAEELESQAAAQTKAVADARIALDKATEERADDEKKLASVRQTLTELRKTAQERDAQIARLRELIAREESAVQLATSRAKDYASQRDSLTSQRDDAQQQLDALRSEADSIADDDGAALDAARATLAECRERLNERADKQREIQSKIISLKSKADALADTLDSRNASGSLERDTDVASLGRLTDFIHVAEGWEEAVAHALDQYASAIVVPAAGNMLHALERAREDKLGKAVVLTASIAGDPATEPGTESEESSAENTGAAPQSGNALAALVTANPDAENPAQAEAVVHTVRLLLADVAMAGTADEAQHIVASGEAMRAVTKNGETFTHGVAAVGGSSISQSDLSLAARRDKALAQVKQLTAQDGGMAEQVAEAKAKRDEAARLVDQESAKRTEARLKAQQAEKSLKSATDRVSSFTRQLEQLDRKITETQENRNEHQLKLDDLNRALASAQQSTAEHADFDELDERERTLERELNLTREHEVAAKIAWTEASRKGESLSRQAGLLRDNAKEAAERRARIEALNDRRREQAAHLQGVADDARAVAAMVEHTLHDVAAKRDELQAAASSHDEELKALRAQRNQIEPKVTDLTGREHALDVNRERLAAESGQLMQKVSDELGLTLEELVSDYGPEQPVPVLDDEGNPVPLDETEAEAETEEGETGGETGTNGDSDRFKTVPYNRQEQKKRLDKARRDLAALGKINPLATEEFEALEERNKYLNDQRNDVVKSRDDLMQLIKDLDSTMVQVFKSAFDDTAEAFEQMFATLFPGGTGRLRLENPEDMLTTGVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEVEAALDDVNLTRLINAFNELRAHAQLIIITHQQRTMSIADALYGVTMRADGVTAVVSQKLER
>NZ_CP010411.1|WP_007055266.1|1833384_1834380_-|GNAT-family-N-acetyltransferase
MITLEKVDGATLEAEAEKAGITLPIEQTKVWSGFQADIDGRTPWGDYLIKRDGELVAVISFIDFETHGYHYLRSMHGPAWVAKPTEAEEREVVDAIVDTVKKADKNIAFLRIDTWFADGTEKVLSTVPYDQTVVIDVTGGDDEILARMKRRGRRDVRKSLRECPAEVADETDKALADFSEYYDVMVETGQRDGFTPAPMSDYSDMIGALGADHCRVFAARIEDRVVAWSIVTVNGTHAVRYYAGMRNEVMRLHVTDKLLYSECCILGSQGITEYDLMGIGSDFAPSLKGLNEFKCKFTEEITPVAPARDVPIKKVFYKTLQTVQGVRKALR
>NZ_CP010411.1|WP_060620881.1|1834501_1836055_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MALTLASAADLLKEHHLLREIIQGDVWTDDPARIASADEPFAGITYDTRKVTQGTLLCCKGRFKAEYLNGIDEAGLAAYVAETEYSAATAAPGLIVNDARKAMSLLSAAFYGYPQNELTVIGVTGTKGKTTTSYFTQALINAVSGGKAALFSSVDNCLDGHTYVESDLTTPESMDAFRMMREAADNGMKYLVMEVSSQAYKVDRVYGLTFDVAAFLNISPDHISPIEHPTFEDYLYCKRQIIANAKSLVLGADSLHADLLREDAAAAGIGVTTFALHDADNAGTSADVVAWPADTAHASFHIADGDQTLGDYHLSIDGDFNYLNAAAAIAIAHAAGVSLDDAGALHAIESVRIAGRMEQFRDPQSNTLAIVDFAHNYASVTALLDFVYERWGEKNPRITLVTGSAGNKAYDRRKEIVEAAENRIANFIFTADDTDTEPVIDICMEMQGYITNKDVASTVISNRPTAITNAIYDARAHADRFNILLIIGKGNERWIKDHHKHVPFDGDDHVVERMFGL
>NZ_CP010411.1|WP_060620882.1|1836193_1836982_+|sigma-70-family-RNA-polymerase-sigma-factor
MQSGQSAGSGESMAAKRARFEQLAMPAVNALYRQAMRLTNNPDDAQDLVQDTFERGFKAFDSFQPGSNFEAWMTTIERNAYFNQYAKAKRRPQRANDSTGEYDDWDIYDAAEHTSDGLKSAEEEYLDAFAPEEIMTALAKLSPERRQVFIDAAIDGKSYQQVADEQGVKIGTVMSRLNRARTQLKRELASYAKERGYATGSSAGSPSAKLSENVGRIADSGHNESSEQTVGSNGDTQAVVRHSHATHAHTPQQSSKLSGKEI
>NZ_CP010411.1|WP_007054435.1|1836981_1837302_+|hypothetical-protein
MNDQPVERTRHISITRTGADGMVSQTEVHITAVHHRSVDTGSASASVQADVHIVTEGDCFDPRTCCDEREQALIAALRAYLRPDVAPECLIARLKATLDHCCGEDK
>NZ_CP010411.1|WP_060620883.1|1837567_1838512_-|aldose-1-epimerase-family-protein
MALKPRTGNQYVISSGEWSAVVTELGASLRELKWRGEDLIVPFDSNKVIPCCNGWVLAPYPNRVTNGQYSFDGEDYQMPIDEFDRQSSLHGYAYRYMWELVDLQESHVTLSWRSPDIAGYPFDITITATYALDENGLTETFTVHNNDSVKAPWAFGIHPWLANGKHATGQAITADNEPCRLELHCDTHVTVDEHLLPTGEEPVSGIFDLRDNPTLEGRGFDDAWTDITNRGEDGSTSAVFTRPDGIKVTLTGDKTINSWQVCTGNEIGEKARQAGVAVEPMTAYADAFRTGKDLVVLEPGDDYTTVVTFHAEQI
>NZ_CP010411.1|WP_060620884.1|1838636_1839593_-|aldose-1-epimerase-family-protein
MTSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAPWPNRIENGEYDFNGKHYCAPVNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPNLDGYPFDVTVTVTYGLGDNGMTVTVNARNDGDEPAPWALGLHPWLANGKQGATSAERDADSAACHLRIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTTTTTFTRPDGIEVKLIGDETINAWQCYTATGAPFTEHPYGIAVEPMTAPANAFRTGDHLVTLAPNGDYTTVVRYEVVQK
>NZ_CP010411.1|WP_082248083.1|1839863_1840877_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MDVQEVPMTKSVVLADPRGFCAGVDRAILTVQTILKAAEASGKRTREDGLPPVYVRRQIVHNKHVVEDLAGQGAVFVQKLAEIPDAAAQAGIPVVFSAHGVSPVVKAEAERRGMHVVDATCPLVGKVHREVLRFVREGYEIVYIGHKGHDEAVGVVGESPEHVYLIEHESDVDSLDFAPDTKLVLLSQTTLSVDETAGTIAALKAKFPWIQEPPSSDICYATSNRQAAVKLVAQQSDCVVIVGSANSSNSVRLMEVAQEGLGERGKAYRVDDASELDPAWFEGLESVGISSGASVPDELVSGVIDALQNLGFTGMKSVETIKENMHFVLPAELRRKK
>NZ_CP010411.1|WP_029679435.1|1840916_1841426_-|Cys-tRNA(Pro)-deacylase
MAKKNKHDKGAGSTPATVQLEKAGVEFHVYEYEHSNDHMDDGYGVEAATKLGFDEHQVFKTLMADTGSERVVGVVPVSGHMDLKALAAAVGAKKASMADPKVAMRESGYVVGGISPLGQKTRHKTVLDESAMQFDQILVSGGKRGLSVGVNPQDLLKVLNAVAAPIGTW

Crispr_ID: NZ_CP010411_8

• CRISPR_ID: NZ_CP010411_8
• CRISPR_location: 2215041-2215133
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP010411_8

Consensus_repeat	Method
CTCCCCTTAAAGAGGGGAGCCAAGAAAC	CRISPRCasFinder

spacers of NZ_CP010411_8

>8.1|2215069|37|NZ_CP010411|CRISPRCasFinder
ACGATATATGACTCCCCTCAGTCACCTACGGTGACAG

CRISPR arrays and Neighbor proteins around NZ_CP010411_8

CRISPR arrays

The CRISPR arrays of NZ_CP010411_8

>merge|NZ_CP010411|8|2215041-2215133|CRISPRCasFinder
CTCCCCTTAAAGAGGGGAGCCAAGAAACACGATATATGACTCCCCTCAGTCACCTACGGTGACAGCTCCCCTCAAAGAGGGGAGCCAAGAAAC

>NZ_CP010411|8|8|2215041-2215133|CRISPRCasFinder
CTCCCCTTAAAGAGGGGAGCCAAGAAAC	ACGATATATGACTCCCCTCAGTCACCTACGGTGACAG
CTCCCCTCAAAGAGGGGAGCCAAGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010411.1|WP_012577798.1|2216574_2217039_-|membrane-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_032683918.1|2231267_2233148_-|elongation-factor-4	unknown	unknown	gnl|CDD|235462
NZ_CP010411.1|WP_060621139.1|2227288_2228335_-|substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|380488
NZ_CP010411.1|WP_060621123.1|2205935_2206844_+|IS256-family-transposase	unknown	unknown	gnl|CDD|307151
NZ_CP010411.1|WP_060621136.1|2219192_2220833_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173853
NZ_CP010411.1|WP_060621135.1|2217146_2219042_-|hypothetical-protein	unknown	unknown	gnl|CDD|271203
NZ_CP010411.1|WP_060621134.1|2215195_2216446_-|glycogen-synthase	unknown	unknown	gnl|CDD|273997
NZ_CP010411.1|WP_021975769.1|2212922_2213090_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_007052167.1|2233294_2233555_+|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|178943
NZ_CP010411.1|WP_129558991.1|2206923_2207142_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP010411.1|WP_060621131.1|2213187_2214033_-|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl|CDD|369792
NZ_CP010411.1|WP_007053341.1|2205598_2205781_-|hypothetical-protein	unknown	unknown	gnl|CDD|143605
NZ_CP010411.1|WP_060621125.1|2207138_2208326_+|MFS-transporter	unknown	unknown	gnl|CDD|340887
NZ_CP010411.1|WP_060621132.1|2214130_2214979_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224044
NZ_CP010411.1|WP_060621141.1|2230025_2231204_-|coproporphyrinogen-III-oxidase	unknown	unknown	gnl|CDD|180172
NZ_CP010411.1|WP_060621675.1|2222558_2227130_-|glutamate-synthase-large-subunit	unknown	unknown	gnl|CDD|236968
NZ_CP010411.1|WP_060621129.1|2211808_2212735_+|IS256-family-transposase	unknown	unknown	gnl|CDD|307151
NZ_CP010411.1|WP_158082805.1|2208339_2208978_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NZ_CP010411.1|WP_060621138.1|2221021_2222557_-|glutamate-synthase-subunit-beta	unknown	unknown	gnl|CDD|237213
NZ_CP010411.1|WP_060621127.1|2210303_2211581_-|MFS-transporter	unknown	unknown	gnl|CDD|349949

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP010411.1|WP_032683918.1|2231267_2233148_-|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP010411.1|WP_060621139.1|2227288_2228335_-|substrate-binding-domain-containing-protein	gnl|CDD|380488	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of LacI is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	6.31575e-83
NZ_CP010411.1|WP_060621123.1|2205935_2206844_+|IS256-family-transposase	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.60388e-58
NZ_CP010411.1|WP_060621136.1|2219192_2220833_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.88554e-139
NZ_CP010411.1|WP_060621135.1|2217146_2219042_-|hypothetical-protein	gnl|CDD|271203	cd14244, GH_101_like, Endo-a-N-acetylgalactosaminidase and related glcyosyl hydrolases. This family contains the enzymatically active domain of cell surface proteins that specifically cleave Gal-beta-1,3-GalNAc-alpha-Ser/Thr (T-antigen, galacto-N-biose), the core 1 type O-linked glycan common to mucin glycoproteins (EC:3.2.1.97). It has been classified as glycosyl hydrolase family 101 in the Cazy resource. Virulence of pathogenic organisms such as the Gram-positive Streptococcus pneumoniae and other commensal human bacteria is largely determined by their ability to degrade host glycoproteins and to metabolize the resultant carbohydrates.	6.55168e-95
NZ_CP010411.1|WP_060621134.1|2215195_2216446_-|glycogen-synthase	gnl|CDD|273997	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP010411.1|WP_007052167.1|2233294_2233555_+|30S-ribosomal-protein-S20	gnl|CDD|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	4.15757e-23
NZ_CP010411.1|WP_060621131.1|2213187_2214033_-|Cof-type-HAD-IIB-family-hydrolase	gnl|CDD|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	6.59184e-60
NZ_CP010411.1|WP_007053341.1|2205598_2205781_-|hypothetical-protein	gnl|CDD|143605	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	1.4529e-06
NZ_CP010411.1|WP_060621125.1|2207138_2208326_+|MFS-transporter	gnl|CDD|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.07743e-15
NZ_CP010411.1|WP_060621132.1|2214130_2214979_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	1.97254e-71
NZ_CP010411.1|WP_060621141.1|2230025_2231204_-|coproporphyrinogen-III-oxidase	gnl|CDD|180172	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated.	3.67199e-167
NZ_CP010411.1|WP_060621675.1|2222558_2227130_-|glutamate-synthase-large-subunit	gnl|CDD|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP010411.1|WP_060621129.1|2211808_2212735_+|IS256-family-transposase	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	4.87692e-31
NZ_CP010411.1|WP_158082805.1|2208339_2208978_+|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.023e-10
NZ_CP010411.1|WP_060621138.1|2221021_2222557_-|glutamate-synthase-subunit-beta	gnl|CDD|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
NZ_CP010411.1|WP_060621127.1|2210303_2211581_-|MFS-transporter	gnl|CDD|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.27071e-16

Protein sequences

>NZ_CP010411.1|WP_060621132.1|2214130_2214979_-|ATP-binding-cassette-domain-containing-protein
MTNTVLQLDNVEFRRNRRVIITDVNLTINAGERWVLFGPNGIGKSTAVGMLATRTFPSEGRVFILGHQLGKYDVFKLRTRIGLASADLGRQFPEFEDPLDAVVTGLSAVTGRWRDTYTQEEYARARHLLRDFRVSYLEGKEMWRLSEGERTRVLIARALMGDPELLIMDEPTTGLDLGGREQVMRTLSRIGEENSERAVMLVTHRLEEIPAGFDHIAIMGRKPIPAEDATEAGVDSMGNPGAGTIVYTGSLENGLTDERLSELFGMPIEVQNTHGRWAAYAV
>NZ_CP010411.1|WP_060621131.1|2213187_2214033_-|Cof-type-HAD-IIB-family-hydrolase
MTTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSVPKIERSILDLGFDGVVSVAGAQANIGDKLLFQHLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRRHLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSKGSYFTGPEPDVSFEDTQHDLAPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLKAAGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV
>NZ_CP010411.1|WP_021975769.1|2212922_2213090_-|hypothetical-protein
MPTIMKEQMEVSIRVTPQQAFDFIKQQVDANEGFDEDTRPVRVHDSAYLKQLLES
>NZ_CP010411.1|WP_060621129.1|2211808_2212735_+|IS256-family-transposase
MSDKIIRFDDALFGSEPDALVRVKVERTINAMPDAGADEIANAAGYERRTGRKAFRAGHHGRAPATKAGKLSLKAPELKGALFGSAVIERCRRRESSVEEALMEMCLAVDEGMREDAAGRERFFRSMIERGSRGVGPVVGDRCAGLVSTVSSMPPNAECQRCMVCFMRDVPSKTPPGHREWASAALKAVFAQENRESAMAKAGTVAGETEERKLKAAANRLRGGVGETTVCLLPGFPANHGIKPRTNDMIERLNKEIRRRTRVVGGFPGSDSALMLVCAGIRYVTSRSWSDRRYMDMSRLDDNPGAAA
>NZ_CP010411.1|WP_060621127.1|2210303_2211581_-|MFS-transporter
MQSGRGGFMIKQDALTRRASIAYYVSTAFLIASKSFPHAVLTVLLLHKGLDLTEIMFVQTAFTIAVFLFEFPSGVISDLYSRKIVYLASILAWVAACSVIVFGTGFAMMCVAWALYGIGEALASGTVDASLINLYKRLSPDPDEEIKTFKRISNQISMVSMIIGAMLGSALYFTIGYNIYAVAMALACAAALPIVLAFPKDEHDAREKKPTIMSQVRDGLSELRKDRRLTFLIGMAAVSQIFFQTHFNLWQAYLLLMGVKDKYLFVFYLVFQVIGIAAYAIHIDGRLRRLLYLGIPVALIMPLLITSGSRIVSIGAYCISVFIFMFLQYMCDVLFSIRVSEERISTLITLNSTTCRIIGFLVLGLNGLLLKQIKLTTLIVGSFEIATFLSILLGLLFMLSFSKKKKKQHTEPRVPAPNEPSRKNP
>NZ_CP010411.1|WP_158082805.1|2208339_2208978_+|methyltransferase-domain-containing-protein
MDTSLVENHNSHNSPLPICDYVRLFSSPLDKGLYVGCGNGRNAFPLLSGGWNLYACDVSNFNIQRAQKYLPQYADRFEALSYDQAFSYIPEFDYVICSRALVYGSFEESLQRFKILRRRLRPSGILLFQLPAIGTDLCPKWVNYAITEMGSLVVGYNLHSLSKVYLSFTDVCDLLERAGFKICNGPTPYDLPRGEYPGGIVRNWLGVAINND
>NZ_CP010411.1|WP_060621125.1|2207138_2208326_+|MFS-transporter
MNYIEQRLQRAALLASGIDAFGTGSFVSAAAVIFSSYNHVSAGIIGLGLTFSAVSGMIASMPAAYLADRIGGLRVFTYSYLLRAVGMLGWLIISGDAAFLVYMTMFGIIDRSAASLTRGLIIAPLSREQATILLGRMALPTNVGYALGAALSTMMLLIQYGNVIIVAANSLSFVVVVVLYRRALKGCNVTAAKVKRSPLTSWTVFRTALTSRSRSRLIIENFLFSFHRTLLNVYLPLLIIHYAPTDTWQAPAIFVANTVVIALAQGPVNHWATKAHNYALAWRCSGLLQAIAFIAVACIPFLSHDFPFIALVMLLAMLQIIAELLSTAGITMYMALLSRKDYLTTDLSAINLGGQFQNIVGPSLFASTITAANCVLPAAMGIAITLAAALPRKSE
>NZ_CP010411.1|WP_129558991.1|2206923_2207142_+|hypothetical-protein
MVDVKLRGIAEGRLGTGSMCYDLANGNTVADVVKHVALQDEGLTRTLIDESRQKPRRLCRIMINCPSCGAGK
>NZ_CP010411.1|WP_060621123.1|2205935_2206844_+|IS256-family-transposase
MSDKIIRFDDALFGSAVIERCRRRESSVEEALMEMRLAGVGTRGVDGTGRLLWGERMPSRTLSDKLKKIHKGIDEWRKRPLESECPYVFVDGVRRKRSRGGRVENAGVLVAIGVGTEGRREAIAVDEGMREDAAGRERFFRSMIERGSRGVGPVVGDRCAGLVSTVSSMPPNAECQRCMVCFMRDVPSKTPPGHREWASAALKAVFAQENRESAMAKAGTVAGETEERKLKAAANRLRGGVGETAACLLPGFPANHGIKPRTNDMIERLNKEIRRRTRVVGGFPGSNSWPTANLRKEAGTII
>NZ_CP010411.1|WP_007053341.1|2205598_2205781_-|hypothetical-protein
MAEEPERNLEIIDGFARDAAAGDREADLITAELSRECLDSARRTLPVLQNRRFADPQLCD
>NZ_CP010411.1|WP_060621134.1|2215195_2216446_-|glycogen-synthase
MKVDILTREYPPHVYGGAGVHAEELSKVLAERIDVTVRAFDGKRTDADIPAIPNAANAKGSLKVVGYDTPSELADANPALKTFGVDLQIANDVDADIIHAHTWYACLAGYLAKMLHGTPLVITAHSLEPFRPWKREQLGGGYNLSSWGEKEAYEHADRVIAVSGGMRKDILTAYPNLDPGKVVVVYNGITMADFATPAPDDPGWKVFDRYNIDRSKPTLLFVGRITRQKGLPYLLKALHLISKDIQVVLCAGAPDTPEIAEEVKTAFAKLDEERGNIVWIEEMLPKPELNALEHGCDAFICPSIYEPLGIVNLEAMACGLPVVASATGGIPEVVVDGETGYLVPIDQLHDGTGTPTDPDKFVHDMAAAIDKIMADPELVKKMGQAGYERARDVFSWETIADKTVEVYQSVLDEQKK
>NZ_CP010411.1|WP_012577798.1|2216574_2217039_-|membrane-protein
MPNRAERRAQAKAGRRGVPSQYDQTQGRGRSGMIDEYQLQQKSQRLQDGTDDTEWKPSGGTIADTETLLTTNPNYTNPKMFKAPHSLRQWFRVGSWTLIAIAIIAFFVVMWLPSHPMWLIITVSAVFIVGVLSLFFTAGDSKHNPNLDQNGTAV
>NZ_CP010411.1|WP_060621135.1|2217146_2219042_-|hypothetical-protein
MEFNVSGTTVRFDERTMQFAFTRDGAEWNTCADFKPTLQCAQGTFAFADATSITHEQRETGTGTGIRSIFTGFRHSAYSFETYVWVERASGDVLFEWIPLNEQGLNITNVTWPAAMDFDCADDHDTTLITHEQGVMIPNTWPTAVSTKDIAFDGRFETAGGYMPWFAQLRADGHGYIAICETPWNAGYGIDHPSDGPYTHINTWFEPSLGTMNYRRVVRYQFLDHADHTAVCKAYRSYVNERGRLRTLVEKAARNPSVRDLIGRSWVHIGIKTKVQPDSYYYDKDHPEKNDSLVTFAQREKQMRTLHSMGAGRLYMHLDGWAQPGYDNAHPDYLPACQEAGGWEGMKSLVDACHEQGDIFGTHDQYRDYYFTAQTFDANNAIRLADGTMPEHARWAGGHQTYLCAELAPDYVRRNFTQIAAHGIKLDCAYLDVFTCNEGDECSNPEHRMTRRECFDRRAECFEYLLSHGILSSSEEVSDWAVPSLIFCHYAPYDFQMRSPNEPRQGVPVPLYNLVYHDCIIEPWMMERVANGDDYMLYALLNGGAPYLIRDAAYIGVDGDMDDEQRARTENDIERCHTVAAFHERVGMQELVRHEFVDDDPLMQRSVFADGTAVTCDFHTQTYRITDCPHR
>NZ_CP010411.1|WP_060621136.1|2219192_2220833_-|ABC-transporter-substrate-binding-protein
MNTRHVTSLVAAGAAIVMLLSGCGSTGTSNSSNASDSNIISVYGSEPAHPLFPGNTTEAGGGKVVDQLFAGLVTYDAKGGIHNEVADSITSSDNATHYVIKLKSGWKFTDGTPVTAHSFVNAWNYTANSANKQASASFFSTIEGYDDLQKPDVDPKATLSGLTVVDDNTIDVKLSQPDSAFPVKAGSHAYMPLPESAFKDPKKFGQHPVSNGPYKFVSWQHNHSIEMVKNPDYKGNRVAKNDGLNFKIYTSPDSAYADLRGGNLDFTNTIPDTALTSFQSDKSLKAYNEPGGNTLTFTIPEWLEHFGQNEEGNLRRQAISMSIDRKTVAEKIFHGTATPAVDFLAAPISAYSKELKGNEVLKYNPSKAKELWAKANAISPWSGEFGIAYNADGTAKNWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLVQLYDSSSADGKGGNSGNYKNPAFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQNATAASTSAVSGVAFDYGGGPVFTALTKKQ
>NZ_CP010411.1|WP_060621138.1|2221021_2222557_-|glutamate-synthase-subunit-beta
MGDPRGFLKVRTRRELAERPVEERIKDWFDVHAETGLQPWTQTQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPALCEQACVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAIVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVIVIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEPSSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGTEEEKAKVTIDNSTTAEGFVADERGHVTGLKVVSVAPGENGPFTRQPGTERVLPADLVLISVGFLHPDTETILDQLPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSCAAAVDEYLSKEKSELPAPIKASQRPMMLPR
>NZ_CP010411.1|WP_060621675.1|2222558_2227130_-|glutamate-synthase-large-subunit
MTFKAPLDLTVHAPDGMYDPANEHDACGVGMVTTLNKRPERKIVTDAIEILVNLDHRGAVGAEENTGDGAGILMSMPDEFMRATVPAELPEAGHYAAGIAFLDRDIETSGQQEQAIAKIVREEGLEVLAWRVVPTNPDGLGLQALAAMPGFKTLVVASPDGALAGVDLDRKTFRIRKRVEHEVGVYFASLSARTITYKGMLTTMQLTHFFEDLNDERMKATIAIVHSRFSTNTFPSWPLAQPFRLLAHNGEINTIQGNRNWLSAREGRLSSELLGEFEPLLPITTPGYSDSGTFDECLELLHLAGRSLPHAICMMLPPAWEKNPDLDPDVRAFYEYNNTLIEPWDGPADIVFTDGTQVGALLDRNGFRPGRWQLTDDGYIVLASEAGVLPEIAQEHIVSKGRLEPGKMFLVDTAEGRIIPDEEIKKTLASQHPYRKWVEGNSVEMSDLPRREHVSHSGQSVQRRQRAFGYTEEDLKLLLTPMANTGKEPLGSMGNDAPMPALSSRSRMLFDYFTQKFAQVTNPPLDWEREEIVTSLESAIGPEPNLLADSELHAKKILIPLPVVNSDEMAQLKRLDKARILGGYYRPYVVKGLYQVAGGGKALEERLDEIFAEIDEAIADGKNFIVLSDRESNHTWGPIPSLLLTSAVQHHLLRRHTRTQISMAVEAGDVREIHHVALLIAYGAACVNPYLAFESVEDLARNGYLKVDADAAVKNLTKALSTGVLKIMSKMGVSTIMSYRGAQLFEAVGLSQEVIDEYFTGTTSRVGGVGLDEIAEEVAIRHRVAYPNQWSASPHRNLRTGGDYKWRRTGEDHLNDPEAIFLLQQSTHRGDYQMFKKYSHHINDTSNRLMTLRGLMKFNNNRKPIDISEVEPASEIVKRFSTGAMSYGSISQEAHETLAIAMNSIGARSNSGEGGESDDRINDPQRYSRIKQIASARFGVTSDYLVHATDLQIKLAQGAKPGEGGHLPGAKVPPWIAKVRHATPGVELISPPPHHDIYSIEDLKQLINDAKMANPKARIHVKLVSEFGVGTIAAGVAKCHADVVLISGYDGGTGAAPLNAIKHAGTPWEIGLSETQQTLILNGLRSRIVVQCDGELKTGRDVVIAALFGAEEFGFATAALIVEGCVMMRACQKNTCPQGIATQDPELRARFKGKPEYVVNFFMFIAEEVREILAQLGFRTLEEAIGHVECLDQDEAIKRWKSGGIDLTNVLKQAGPVPGTILHQTIEQNHELEKALDNKLIELAQPALEHKEPVRIEMPIRNVNRTVGTMVGYEITRRYGEEGLPDDTIDMTLHGSGGQSIGAFIPRGETMRIYGEVNDYAGKGLSGGRMIVRPEDTVTFDKHSNVIAGNVTGFGATSGQMFVAGRAGERFGVRNGGATFVVEGVGDHGCEYMTGGTVVVLGPTGRNFGAGFSGGNTYVLDLDMKKVNPGAIKSGALLFKSLDAETSKLVYALVKQHAEETGSQFAAALLEDWNETVKRFTHVVPKQFVAMTKAMEEAKANNVDFNAPGAWEKVYEQVMEGAR
>NZ_CP010411.1|WP_060621139.1|2227288_2228335_-|substrate-binding-domain-containing-protein
MAKSTGRTRPVIKDVARLAGVSAPTVSRYLNGTVNVAEDKCERIAKAISQLGYEPNIVARALSNREMDSVVVFAANPSAFSTSETNHGVEAAARRRRFLLNIVSLDESDMESVEARVRMGLSIRPAGVIVYEYDRAGIAALEYIPKDMPMVVVGGSFGDGDYQIINAERDGGRWMTMHLLDLGHRTVFHVGRPAGPTANTRTNGWRDALEERGIAAPDPIIVPDDDLDESVKAGRVLGRRDEVTAIFADNDEIAVAVIRGLREVGRRVPDDVSVVGFDDRNFGAMWNPALTSYTQNFLDMGERSFRMLFERIQAKRTGDGMPPSQVEVVQGEPCLRASERAYDGGEAL
>NZ_CP010411.1|WP_060621141.1|2230025_2231204_-|coproporphyrinogen-III-oxidase
MTYEIYIHVPFCLRRCGYCDFNTYTATDLGAGASRGHYAEMVIREMALIRQWQCDHGIEEPAASTVFFGGGTPTVLAAADLVAMVDAIRGIWGLTPDAEITTEANPDTVDEAYIAELADGGFTRISFGMQSAVPHVLATLDRTHTPSNVAAGVNAATMSGLRSSVDLIYGAPGESLEDWRTSVEAALDLGVHHISAYALTVEPTTKMGRRIAAGTLPKPDDDDEAAKYELADELFTQAGLDWYEISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYRCHAVSSNGYGLRSWDIAHPRLWGVAINEHRVPWADSERITAEENLEELIMLGLRMREGLDLERIDRVIAVDRLTPMIEEGLVTVVDGRRVVPTRRGRLINDTVIERFFDLAGI
>NZ_CP010411.1|WP_032683918.1|2231267_2233148_-|elongation-factor-4
MVVQHNQPGSTDQSVIRNFCIIAHIDHGKSTVADRILQLSGIVPEREMRDRFLDRMDIEQERGITIKSQAVRVPWTFDGTEYTLGMIDTPGHVDFTYEVSRALAACEGAVLLVDATQGIEAQTLSNLYMAIDHDLAIIPVLNKIDLPSAEPDKHAEEIAGLIGCEPSDVLRVSGKTGEGVADLLDQIVMDVPAPHGDPDAPARALIFDSVYDSYRGIVTYIRMEDGELHDREKVHMMGIGMTHDPIEIGVISPDMTRTKALGAGEVGYIITGAKDVSQSKVGDTLTSAVRPATEPLPGYRDPKPMVYAGLFPIDNAQFPELRDALDKLKLNDAALIYTPETSVALGFGFRCGFLGLLHMEIVNERLSREFGLDLIQTAPNVTYDVTAEDGSQHHVTNPSEFPDGKIKKIVEPMVAADIITPKEFIGAVMDLCQDHRGIMGTMEYISTDRVEMHYRIPLAEIVFDFFDQLKSRTKGYASLDYHEDGEQSADLVKVDILIQGEKVDAFSAIVHRDKAYSYGVMMTKKLRSLIPRQQFEIPIQAAIGSRIIARENIRALRKDVLAKCYGGDITRKRKLLEKQKAGKKRMKMLGHVEVPQEAFIAALSTGEDSNDRDTKDKIRAAQKTEG
>NZ_CP010411.1|WP_007052167.1|2233294_2233555_+|30S-ribosomal-protein-S20
MANIKSQKKRVLTNEKAHLRNVAVKSGLKTAIRATREAIAAGDKAAAEAAYKVAAQKLDKAAGAGVIHKNQAANRKSGLAVAINAL

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP010411_5	5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT	1540485-1540516	32	NZ_CP049245	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence	214043-214074	4	0.875
NZ_CP010411_3	3.1|1134883|26|NZ_CP010411|CRISPRCasFinder	1134883-1134908	26	NZ_CP042827	Ruania sp. HY168 plasmid unnamed, complete sequence	26305-26330	5	0.808
NZ_CP010411_5	5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT	1538602-1538635	34	MN585966	Gordonia phage Faith5x5, complete genome	8051-8084	5	0.853
NZ_CP010411_5	5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT	1537658-1537691	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	682385-682418	7	0.794
NZ_CP010411_5	5.15|1538266|33|NZ_CP010411|CRISPRCasFinder,CRT	1538266-1538298	33	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	787945-787977	7	0.788
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP049248	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence	45955-45988	7	0.794
NZ_CP010411_5	5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT	1539948-1539980	33	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	2071966-2071998	7	0.788
NZ_CP010411_5	5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT	1539948-1539980	33	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1555337-1555369	7	0.788
NZ_CP010411_5	5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT	1540014-1540046	33	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1651502-1651534	7	0.788
NZ_CP010411_5	5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT	1540014-1540046	33	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1395914-1395946	7	0.788
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	NZ_CP028567	Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pMCR5_045096, complete sequence	212807-212840	8	0.765
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1659431-1659464	8	0.765
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1967870-1967903	8	0.765
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	NZ_CP017294	Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence	289627-289660	8	0.765
NZ_CP010411_5	5.5|1537591|34|NZ_CP010411|CRISPRCasFinder,CRT	1537591-1537624	34	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	56921-56954	8	0.765
NZ_CP010411_5	5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT	1537860-1537892	33	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	96689-96721	8	0.758
NZ_CP010411_5	5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT	1537860-1537892	33	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	530578-530610	8	0.758
NZ_CP010411_5	5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT	1537860-1537892	33	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	587251-587283	8	0.758
NZ_CP010411_5	5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT	1538736-1538769	34	KF024728	Mycobacterium phage Muddy, complete genome	26988-27021	8	0.765
NZ_CP010411_5	5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT	1538736-1538769	34	JX901189	Mycobacterium phage vB_MapS_FF47, complete genome	26702-26735	8	0.765
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	586749-586782	8	0.765
NZ_CP010411_5	5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT	1539948-1539980	33	NZ_CP020471	Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence	95510-95542	8	0.758
NZ_CP010411_5	5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT	1540014-1540046	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	808614-808646	8	0.758
NZ_CP010411_5	5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT	1540014-1540046	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1163220-1163252	8	0.758
NZ_CP010411_5	5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT	1540014-1540046	33	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	358317-358349	8	0.758
NZ_CP010411_5	5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT	1540485-1540516	32	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	96818-96849	8	0.75
NZ_CP010411_5	5.55|1540954|35|NZ_CP010411|CRISPRCasFinder,CRT	1540954-1540988	35	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	428087-428121	8	0.771
NZ_CP010411_5	5.55|1540954|35|NZ_CP010411|CRISPRCasFinder,CRT	1540954-1540988	35	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	197326-197360	8	0.771
NZ_CP010411_5	5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT	1537658-1537691	34	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	348631-348664	9	0.735
NZ_CP010411_5	5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT	1538602-1538635	34	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	1072444-1072477	9	0.735
NZ_CP010411_5	5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT	1538602-1538635	34	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	622876-622909	9	0.735
NZ_CP010411_5	5.21|1538669|34|NZ_CP010411|CRISPRCasFinder,CRT	1538669-1538702	34	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	213932-213965	9	0.735
NZ_CP010411_5	5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT	1539614-1539647	34	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	138667-138700	9	0.735
NZ_CP010411_5	5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT	1539614-1539647	34	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	129923-129956	9	0.735
NZ_CP010411_5	5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT	1539614-1539647	34	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	160575-160608	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1385022-1385055	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1609977-1610010	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1441260-1441293	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1385175-1385208	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	738702-738735	9	0.735
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1393680-1393713	9	0.735
NZ_CP010411_5	5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT	1539948-1539980	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	139844-139876	9	0.727
NZ_CP010411_5	5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT	1540485-1540516	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	300045-300076	9	0.719
NZ_CP010411_5	5.57|1541090|32|NZ_CP010411|CRT	1541090-1541121	32	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	496412-496443	9	0.719
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	MH669006	Streptomyces phage LibertyBell, complete genome	33622-33653	9	0.719
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	MH669006	Streptomyces phage LibertyBell, complete genome	33622-33653	9	0.719
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	MG925347	Microbacterium phage Lucky3, complete genome	36770-36803	10	0.706
NZ_CP010411_5	5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT	1537524-1537557	34	MG925343	Microbacterium phage Golden, complete genome	36770-36803	10	0.706
NZ_CP010411_5	5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT	1538602-1538635	34	NZ_LN831788	Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE1, complete sequence	42772-42805	10	0.706
NZ_CP010411_5	5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT	1538736-1538769	34	NC_008271	Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence	31727-31760	10	0.706
NZ_CP010411_5	5.33|1539477|35|NZ_CP010411|CRISPRCasFinder,CRT	1539477-1539511	35	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1759544-1759578	10	0.714
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	987860-987893	10	0.706
NZ_CP010411_5	5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT	1539681-1539714	34	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	825263-825296	10	0.706
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP023713	Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence	32650-32683	10	0.706
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	MT658804	Mycobacterium phage BengiVuitton, complete genome	3293-3326	10	0.706
NZ_CP010411_5	5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT	1540485-1540516	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1031018-1031049	10	0.688
NZ_CP010411_5	5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT	1540485-1540516	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	872191-872222	10	0.688
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	NZ_LT905089	Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1	19430-19461	10	0.688
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	116455-116486	10	0.688
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	NC_019125	Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence	75409-75440	10	0.688
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	NC_031129	Salmonella phage SJ46, complete genome	38258-38289	10	0.688
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	NZ_LT905089	Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1	19430-19461	10	0.688
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	116455-116486	10	0.688
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	NC_019125	Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence	75409-75440	10	0.688
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	NC_031129	Salmonella phage SJ46, complete genome	38258-38289	10	0.688
NZ_CP010411_5	5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT	1537658-1537691	34	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	375498-375531	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_KP975076	Pseudomonas aeruginosa strain MRSN17623 plasmid pMRVIM0713, complete sequence	35697-35730	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	MN336501	Pseudomonas aeruginosa strain 164130 plasmid p4130-KPC, complete sequence	55980-56013	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP014066	Achromobacter xylosoxidans strain FDAARGOS_162 plasmid unnamed, complete sequence	12218-12251	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP014059	Achromobacter xylosoxidans strain FDAARGOS_147 plasmid, complete sequence	4305-4338	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP021651	Acidovorax sp. T1 plasmid p3-T1, complete sequence	23360-23393	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NC_009739	Pseudomonas aeruginosa plasmid pMATVIM-7, complete sequence	22057-22090	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP018473	Xanthomonas perforans strain LH3 plasmid pLH3.4, complete sequence	6295-6328	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP018473	Xanthomonas perforans strain LH3 plasmid pLH3.4, complete sequence	25669-25702	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_MK423762	Achromobacter ruhlandii strain 138R plasmid p138R, complete sequence	16914-16947	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_CP033834	Pseudomonas aeruginosa strain FDAARGOS_570 plasmid unnamed, complete sequence	35600-35633	11	0.676
NZ_CP010411_5	5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT	1539813-1539846	34	NZ_AP013064	Serratia marcescens SM39 plasmid pSMC1, complete sequence	12139-12172	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP031899	Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence	32076-32109	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_KM085450	Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence	96061-96094	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_KM085449	Escherichia coli O104:H7 strain RM9387 plasmid pO104_H7, complete sequence	19352-19385	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP009107	Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence	96060-96093	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP009105	Escherichia coli strain RM9387 plasmid pO104_H7, complete sequence	19350-19383	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027375	Escherichia coli strain 05-3629 plasmid unnamed2, complete sequence	59683-59716	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP028382	Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence	111007-111040	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027343	Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence	60355-60388	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027463	Escherichia coli isolate 07-4299 plasmid unnamed	29682-29715	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP012500	Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence	121141-121174	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP012501	Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence	136856-136889	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027441	Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence	47899-47932	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP042296	Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence	6700-6733	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027458	Escherichia coli strain 88-3493 plasmid unnamed, complete sequence	47288-47321	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027370	Escherichia coli strain 2014C-3307 plasmid unnamed2	51135-51168	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027453	Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence	33578-33611	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027372	Escherichia coli strain 2015C-3905 plasmid unnamed	52884-52917	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP012499	Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence	219515-219548	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP028121	Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence	96523-96556	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NC_007365	Escherichia coli EH41 plasmid pO113, complete sequence	117064-117097	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP023542	Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence	96065-96098	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP024291	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed2, complete sequence	27793-27826	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP023164	Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence	121912-121945	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	CP027378	Escherichia coli strain 2013C-4404 plasmid unnamed2	18086-18119	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP015246	Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence	71791-71824	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP031907	Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence	51600-51633	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	CP042949	Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence	102652-102685	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP012498	Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence	46249-46282	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027585	Escherichia coli strain 00-3076 plasmid unnamed, complete sequence	57428-57461	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	NZ_CP027451	Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence	60651-60684	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	CP027641	Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence	56536-56569	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	CP027581	Escherichia coli strain 2013C-4282 plasmid unnamed2, complete sequence	41743-41776	11	0.676
NZ_CP010411_5	5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT	1540887-1540920	34	CP027674	Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence	21367-21400	11	0.676
NZ_CP010411_5	5.58|1541155|32|NZ_CP010411|CRT	1541155-1541186	32	MN693521	Marine virus AFVG_25M508, complete genome	14586-14617	11	0.656
NZ_CP010411_5	5.59|1541220|32|NZ_CP010411|CRT	1541220-1541251	32	MN693521	Marine virus AFVG_25M508, complete genome	14586-14617	11	0.656

1. spacer 5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP049245 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.875

tccatggtggaggtattgcgcgccgaggccgc	CRISPR spacer
tacatggtggaggtattgagcgccaaggccac	Protospacer
* **************** *****.*****.*

2. spacer 3.1|1134883|26|NZ_CP010411|CRISPRCasFinder matches to NZ_CP042827 (Ruania sp. HY168 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ttaggcggggtgtgaggggtggttcc	CRISPR spacer
gtaagcggggtgggaggggtggttaa	Protospacer
 **.******** ***********  

3. spacer 5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT matches to MN585966 (Gordonia phage Faith5x5, complete genome) position: , mismatch: 5, identity: 0.853

-tcgctctcatcggtggtggtgggcttggcggact	CRISPR spacer
gtcgcggtc-tcggtggtggtcggcttggcgggct	Protospacer
 ****  ** *********** **********.**

4. spacer 5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.794

aacgc-ttcctcgacctgctggtcccaccgttcga	CRISPR spacer
-acgtgatcggcgacccgctggtcacaccgttcga	Protospacer
 ***.  **  *****.******* **********

5. spacer 5.15|1538266|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

catgtggcggaaacaccaactccgtctccctcg	CRISPR spacer
ccgcaggcggatacaccaactccgcctccctct	Protospacer
*    ****** ************.******* 

6. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP049248 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

---acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
aaagcccac---gcgttcggcggcgcgatccgctgcc	Protospacer
   .**.**   ****.********.***********

7. spacer 5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

acgat--cctcggcaagcgcaggacgctggccatc	CRISPR spacer
--gattatctcggcaagcgcaaggcgctggccgtg	Protospacer
  ***  .*************.*.********.* 

8. spacer 5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 7, identity: 0.788

acgat--cctcggcaagcgcaggacgctggccatc	CRISPR spacer
--gattatctcggcaagcgcaaggcgctggccgtg	Protospacer
  ***  .*************.*.********.* 

9. spacer 5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.788

ccgctgaccggcgatacggcgacgctcgagagg	CRISPR spacer
cggctggccggcgatccggcgacgctcgccggc	Protospacer
* ****.******** ************  .* 

10. spacer 5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.788

ccgctgaccggcgatacggcgacgctcgagagg	CRISPR spacer
cggctggccggcgatccggcgacgctcgccggc	Protospacer
* ****.******** ************  .* 

11. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP028567 (Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pMCR5_045096, complete sequence) position: , mismatch: 8, identity: 0.765

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
gacgagccgatgatcaccagcctgaccctcaagg	Protospacer
. ** .*  ******* ******* *********

12. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.765

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
cccgcacgcacgatcagcagcatgccgccgaacg	Protospacer
 .********.********** **** *. ** *

13. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.765

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
cccgcacgcacgatcagcagcatgccgccgaacg	Protospacer
 .********.********** **** *. ** *

14. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
aacgaccgcatgatcagcagcgtacccctcgtgc	Protospacer
* **  *************** *.******. * 

15. spacer 5.5|1537591|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

cacttgtccttggtctctatggggttgccgccgc	CRISPR spacer
gacctccccttggtctctagggcgttgccgcagg	Protospacer
 **.* .************ ** ******** * 

16. spacer 5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

ctcagtaggaattctggcgtgatcgtcaagacc	CRISPR spacer
cgcgtccggaattctgtcgtgatcgtccagaac	Protospacer
* *. . ********* ********** *** *

17. spacer 5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

ctcagtaggaattctggcgtgatcgtcaagacc	CRISPR spacer
cgcgtccggaattctgtcgtgatcgtccagaac	Protospacer
* *. . ********* ********** *** *

18. spacer 5.9|1537860|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

ctcagtaggaattctggcgtgatcgtcaagacc	CRISPR spacer
cgcgtccggaattctgtcgtgatcgtccagaac	Protospacer
* *. . ********* ********** *** *

19. spacer 5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT matches to KF024728 (Mycobacterium phage Muddy, complete genome) position: , mismatch: 8, identity: 0.765

aacaacgtcgaaagcatcgaacaggtggaggccg	CRISPR spacer
gccgaggtcgaaaccatcgaagaggtggaggaag	Protospacer
. *.* ******* ******* *********  *

20. spacer 5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT matches to JX901189 (Mycobacterium phage vB_MapS_FF47, complete genome) position: , mismatch: 8, identity: 0.765

aacaacgtcgaaagcatcgaacaggtggaggccg	CRISPR spacer
gccgaggtcgaaaccatcgaagaggtggaggaag	Protospacer
. *.* ******* ******* *********  *

21. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 8, identity: 0.765

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
ctctacacgccgtccggcggcgagatcgtctatc	Protospacer
 .******* ************ ****  **..*

22. spacer 5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP020471 (Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence) position: , mismatch: 8, identity: 0.758

acgatcctcggcaagcgcaggacgctggccatc	CRISPR spacer
ttcaaggtcgacaagggcaggacgctggccatc	Protospacer
 . *   ***.**** *****************

23. spacer 5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.758

ccgctgaccggcgatacggcgacgctcgagagg	CRISPR spacer
cggctggccggcgatccggcgacgctcgccgcc	Protospacer
* ****.******** ************  .  

24. spacer 5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.758

ccgctgaccggcgatacggcgacgctcgagagg	CRISPR spacer
cggctggccggcgattcggcgacgctcgccgct	Protospacer
* ****.******** ************  .  

25. spacer 5.41|1540014|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 8, identity: 0.758

ccgctgaccggcgatacggcgacgctcgagagg	CRISPR spacer
ttgctgaccgtcgatacggccacgctcccgaac	Protospacer
..******** ********* ******  **. 

26. spacer 5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 8, identity: 0.75

tccatggtggaggtattgcgcgccgaggccgc	CRISPR spacer
ccggcgatggaggtgtcgcgcgccgaggcctc	Protospacer
.* ..*.*******.*.************* *

27. spacer 5.55|1540954|35|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.771

acggtgcgcacgtccgtggggtcgccgttctgata	CRISPR spacer
ccggcgcgcacgtccgtgaggtcgccatgcagttc	Protospacer
 ***.*************.*******.* * * * 

28. spacer 5.55|1540954|35|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.771

acggtgcgcacgtccgtggggtcgccgttctgata	CRISPR spacer
ccggcgcgcacgtccgtgaggtcgccatgcagttc	Protospacer
 ***.*************.*******.* * * * 

29. spacer 5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 9, identity: 0.735

aacgcttcctcgacctgctggtcccaccgttcga	CRISPR spacer
aacgcttcgtcgacctgctgttcccgcagacgcg	Protospacer
******** *********** ****.* * .  .

30. spacer 5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 9, identity: 0.735

tcgctctcatcggtggtggtgggcttggcggact	CRISPR spacer
ctttcggcagcggtggtggtgggcctggcggact	Protospacer
.. ..  ** **************.*********

31. spacer 5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

tcgctctcatcggtggtggtgggcttggcggact	CRISPR spacer
cctccttcatcggcggcggtgggcttggcgattt	Protospacer
.* *..*******.**.*************. .*

32. spacer 5.21|1538669|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 9, identity: 0.735

ttcgatacgcttcgcctccgagatgatgtcccgg	CRISPR spacer
gccgaaacgcttcggctccgagatgagatgcgga	Protospacer
 .*** ******** *********** .* * *.

33. spacer 5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.735

caaaaactcaaccagctcgtcctggaaaaataac--	CRISPR spacer
aagcaactcaaccagctcttcgtgg--aaaccaccg	Protospacer
 *. ************** ** ***  ***. **  

34. spacer 5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.735

caaaaactcaaccagctcgtcctggaaaaataac--	CRISPR spacer
aagcaactcaaccagctcttcgtgg--aaaccaccg	Protospacer
 *. ************** ** ***  ***. **  

35. spacer 5.35|1539614|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.735

caaaaactcaaccagctcgtcctggaaaaataac--	CRISPR spacer
aagcaactcaaccagctcttcgtgg--aaaccaccg	Protospacer
 *. ************** ** ***  ***. **  

36. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
gacgagacggcgttcggcggcctgatccgcacac	Protospacer
. * * *******.******* ********   *

37. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
ggcggcgcggcggccggcggcgtgatcggctcgc	Protospacer
. * .*.***** ************** ***  *

38. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
ggcggcgcggcggccggcggcgtgatcggctcgc	Protospacer
. * .*.***** ************** ***  *

39. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
gacgagacggcgttcggcggcctgatccgcacac	Protospacer
. * * *******.******* ********   *

40. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
ggcggcgcggcggccggcggcgtgatcggctcgc	Protospacer
. * .*.***** ************** ***  *

41. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.735

acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
ggcggcgcggcggccggcggcgtgatcggctcgc	Protospacer
. * .*.***** ************** ***  *

42. spacer 5.40|1539948|33|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

acgatcctcggcaagcgcaggacgctggccatc	CRISPR spacer
gtcaccagcggcacgcgcaggacgccggccatg	Protospacer
.. *.*  ***** ***********.****** 

43. spacer 5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.719

tccatggtggaggtattgcgcgccgaggccgc	CRISPR spacer
gcaggcatggaggtatttcgcgccgtggccga	Protospacer
 * .  .********** ******* ***** 

44. spacer 5.57|1541090|32|NZ_CP010411|CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 9, identity: 0.719

ggcatgacgtgccagccacattcgcggcggat	CRISPR spacer
cttatgacgtgccagccacaggcgcggaagcg	Protospacer
  .*****************  ***** .*  

45. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to MH669006 (Streptomyces phage LibertyBell, complete genome) position: , mismatch: 9, identity: 0.719

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
ctggtaggcgacagcctgtacatccgccacac	Protospacer
***. ******************   * .*. 

46. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to MH669006 (Streptomyces phage LibertyBell, complete genome) position: , mismatch: 9, identity: 0.719

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
ctggtaggcgacagcctgtacatccgccacac	Protospacer
***. ******************   * .*. 

47. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to MG925347 (Microbacterium phage Lucky3, complete genome) position: , mismatch: 10, identity: 0.706

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
agtagtcatatgaacagcagccagcccctcaagc	Protospacer
* ..  *..**** ******** ********** 

48. spacer 5.4|1537524|34|NZ_CP010411|CRISPRCasFinder,CRT matches to MG925343 (Microbacterium phage Golden, complete genome) position: , mismatch: 10, identity: 0.706

atcgcacgcatgatcagcagcctgcccctcaagg	CRISPR spacer
agtagtcatatgaacagcagccagcccctcaagc	Protospacer
* ..  *..**** ******** ********** 

49. spacer 5.20|1538602|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_LN831788 (Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE1, complete sequence) position: , mismatch: 10, identity: 0.706

tcgctctcatcggtggtggtgggcttggcggact	CRISPR spacer
acgaggccatcggtggtggtgggttcggcggcga	Protospacer
 **   .****************.*.*****   

50. spacer 5.22|1538736|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_008271 (Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence) position: , mismatch: 10, identity: 0.706

aacaacgtcgaaagcatcgaacaggtggaggccg	CRISPR spacer
ggtggcgtcgatcgcatcgaacaggtggagagtg	Protospacer
.....******  *****************. .*

51. spacer 5.33|1539477|35|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 10, identity: 0.714

acctggctgaagggcgccgtcaccggcgaccatca	CRISPR spacer
tattggctgaagggtgctgtcaccggcgatctcgg	Protospacer
  .***********.**.***********.* . .

52. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.706

------acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
tgggtggcc------gcgtccgcaggcgtgatccgctgcg	Protospacer
      .**      *******  *************** 

53. spacer 5.36|1539681|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.706

------acctacacggcgtccggcggcgtgatccgctgcc	CRISPR spacer
tgggtggcc------gcgtccgcaggcgtgatccgctgcg	Protospacer
      .**      *******  *************** 

54. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP023713 (Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
aaggccgccgcccgcgccgcaggcatgaccgagg	Protospacer
*  *  . *****.************** ***. 

55. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to MT658804 (Mycobacterium phage BengiVuitton, complete genome) position: , mismatch: 10, identity: 0.706

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
ttcgaaaacgtcgacgccgcaggcaatcccgtga	Protospacer
 *********.* ************    ** . 

56. spacer 5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.688

tccatggtggaggtattgcgcgccgaggccgc	CRISPR spacer
acgatggtggaggtatagggcgccgaattatt	Protospacer
 * ************* * *******. .  .

57. spacer 5.48|1540485|32|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 10, identity: 0.688

tccatggtggaggtattgcgcgccgaggccgc	CRISPR spacer
acgatggtggaggtatagggcgccgaattatt	Protospacer
 * ************* * *******. .  .

58. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to NZ_LT905089 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

59. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

60. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to NC_019125 (Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

61. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

62. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to NZ_LT905089 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-243 genome assembly, plasmid: 1) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

63. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

64. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to NC_019125 (Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

65. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 10, identity: 0.688

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
gattcaggcgacagcctgaacatagcaggaat	Protospacer
     ************* ******* ** . 

66. spacer 5.6|1537658|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 11, identity: 0.676

aacgcttcctcgacctgctggtcccaccgttcga	CRISPR spacer
ggatcgatctcgccctgctcgtcccaccgttcct	Protospacer
..  *  .**** ****** ************  

67. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_KP975076 (Pseudomonas aeruginosa strain MRSN17623 plasmid pMRVIM0713, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

68. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to MN336501 (Pseudomonas aeruginosa strain 164130 plasmid p4130-KPC, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

69. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP014066 (Achromobacter xylosoxidans strain FDAARGOS_162 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

70. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP014059 (Achromobacter xylosoxidans strain FDAARGOS_147 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

71. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP021651 (Acidovorax sp. T1 plasmid p3-T1, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

72. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_009739 (Pseudomonas aeruginosa plasmid pMATVIM-7, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

73. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP018473 (Xanthomonas perforans strain LH3 plasmid pLH3.4, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

74. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP018473 (Xanthomonas perforans strain LH3 plasmid pLH3.4, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

75. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_MK423762 (Achromobacter ruhlandii strain 138R plasmid p138R, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

76. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP033834 (Pseudomonas aeruginosa strain FDAARGOS_570 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

77. spacer 5.38|1539813|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_AP013064 (Serratia marcescens SM39 plasmid pSMC1, complete sequence) position: , mismatch: 11, identity: 0.676

atcgaaaacgcccacgccgcaggcatgagcgaac	CRISPR spacer
gaggccaacgcccaggccgccggcatgagcacgt	Protospacer
.  *  ******** ***** *********. ..

78. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP031899 (Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

79. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_KM085450 (Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

80. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_KM085449 (Escherichia coli O104:H7 strain RM9387 plasmid pO104_H7, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

81. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP009107 (Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

82. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP009105 (Escherichia coli strain RM9387 plasmid pO104_H7, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

83. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027375 (Escherichia coli strain 05-3629 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

84. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP028382 (Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

85. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027343 (Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

86. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027463 (Escherichia coli isolate 07-4299 plasmid unnamed) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

87. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP012500 (Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

88. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP012501 (Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

89. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027441 (Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

90. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP042296 (Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

91. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027458 (Escherichia coli strain 88-3493 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

92. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027370 (Escherichia coli strain 2014C-3307 plasmid unnamed2) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

93. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027453 (Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

94. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027372 (Escherichia coli strain 2015C-3905 plasmid unnamed) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

95. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP012499 (Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

96. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP028121 (Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

97. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NC_007365 (Escherichia coli EH41 plasmid pO113, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

98. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP023542 (Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

99. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP024291 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

100. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP023164 (Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

101. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to CP027378 (Escherichia coli strain 2013C-4404 plasmid unnamed2) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcattcaataca	Protospacer
 .************* *****.****.  .. *.

102. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP015246 (Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

103. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP031907 (Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

104. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to CP042949 (Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

105. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP012498 (Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

106. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027585 (Escherichia coli strain 00-3076 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

107. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to NZ_CP027451 (Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

108. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to CP027641 (Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcattcaataca	Protospacer
 .************* *****.****.  .. *.

109. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to CP027581 (Escherichia coli strain 2013C-4282 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcatttaataca	Protospacer
 .************* *****.****.  .. *.

110. spacer 5.54|1540887|34|NZ_CP010411|CRISPRCasFinder,CRT matches to CP027674 (Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aacgacatcgactaccaaatcggcatcatgctcg	CRISPR spacer
tgcgacatcgactacaaaatcagcattcaataca	Protospacer
 .************* *****.****.  .. *.

111. spacer 5.58|1541155|32|NZ_CP010411|CRT matches to MN693521 (Marine virus AFVG_25M508, complete genome) position: , mismatch: 11, identity: 0.656

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
taacgctgcgacagcctctgcatagccggcac	Protospacer
. . .  ********** *.**********. 

112. spacer 5.59|1541220|32|NZ_CP010411|CRT matches to MN693521 (Marine virus AFVG_25M508, complete genome) position: , mismatch: 11, identity: 0.656

ctgaaaggcgacagcctgtacatagccggcga	CRISPR spacer
taacgctgcgacagcctctgcatagccggcac	Protospacer
. . .  ********** *.**********. 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1665293 : 1683865	16	Faecalibacterium_phage(33.33%)	integrase,protease,transposase	attL 1658609:1658622|attR 1672971:1672984

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP010411|1665293:1683865|DBSCAN-SWA
CCTATACATTGTCAAGCGTTTGGGTGTGTTGTTTTGGGTTGGTTGTCGAGTGTATCCACTGGATGGCCCGTTGCTCGAGTTCGGGAAGGTCGCGTGCGCCGCGTTCGATCTCGCTGATGCGGCTCGAGGGCACGCAGAGCGCCTCGCCGATCTGTTGCTGGGTGATGTTCCGGCTGACGCGTAGTTCGCGCAGCTTGGCGCCGCGTTCGGCCGGGGTCCCGCGTCCGACCTCGCCGTTGCGTATGCTGATGAGCGCCCGGTATGCCTCGCGGGCGATGAACCGTTTGACGCAGCGGATGATCTCGAGCTTGCCTTTGCCCTCGCGGGTCTTTTTGGCCATGTAGTCGCGGGTCGGCTTGTGGTATCGCAGGCGGACGATGGCGATGCGGTGCAATGCCATATTGCCCTGCCGGTTGCCGCCTTTGTTGAGCCTGTGTCGGTTGGTCCTGCCGCTGGACGCGGGGATGGGGCAGACGCCGCAGAGTTTGGCGAACGCGGCCTCGCTTCGGATGCGTTCGGGGTTGTCCCCGGCGACGATGGCCAGGGTCGCGGCGATGACGGCGCCCGCGCAGTACATGTCGAGCAGCGGCCTGGCGTGTTCCTCGAGGATCAGGCGCATGCGTTCCTCCAGGAGACCGGCCTGCCGTTTGAGCGCCTTCCATGCCTTGGCGGCGGATTTCAGCGCGGCCAGCACGCTCCGCTCGACCAGGCCGCCGGCCGGTCTGCATTCGGCGAGCCTGTTCATGCGGGTCTCGCTCCTCAACCCCCGGTAACGTTCCCTGATGGGTTCCGGGGCGGTGACGAGCAGCCCGTTCGTCGAATTGGAGATCGCGGTCATCGCCGACACCAGTTGGGATCGCTGCGCGTTGAGGTGGCGCAGTGCCTCGACCCAGCCGTCCGAGCTTTTCGGCAGGCTCGTGCCGTCGCCGGCCATGACGCTACGGGCAGCGGCGACCGCGTCGAGGGGATCGGACTTGCCGTCCCTGCGGCGCACGCTTCGCCTGGGACGCAGCACCTCGCGCACCTCGTATCCGGCGGCAGTGAGACGACGGGCCAGGGCCGCTCCGAACGAGTTCGTGCCCTCCACGCCCACGGCCGCGACCCTGCCCGGCCCGGGCAGCATGCCGATCAGCCTGTCGTATCCGTCCGGGTCCGCCGTGAACGTCTCGGCGCCCAGCGGCCTGCCCCGCTCGTCGAGCAATGCGATGGTGTGCGTGTCCGTGTGGGTGTCGATCCCGGCCCACACCACTTCGTTCGGCGGCGTCATCGTTGTCGTTCCTTTCCATGTGTTCGGATGCCTCCCGGGGGCTTGCGGCGCAGACAGGACGTTGACGGGGCACGCTACCATGGTTCTTGCGGGATCCGACGGGAGCGGCCACGCTCCTATGAGGTCATGCATCCATGGCCCACGGGTCGGCGGCCATGGGCGGGACAAATCAAAATAAGGACAGCCACCGGAACCGATGGCGTCAGTCAAATGTGGGGTCACCGCCCAAGCCGTCATCCACCATTATCACCGATCAGAAACCGGCATAACCATTATCAACGTCATCTATAGTTGACTCATACTGGCTATGTATGAATTCATCTACGAGTTGGTTGACAACTTGACTCCGGTGCTGATCGACGATGCGCTGGTAGTGCTTGATGGCGACCTTCTCGCTGGAGTGCCCCAGCTCGTCCATAACTTCACGCAACGTGCCGCCCCTGAGCATCAGCAGTGTCGCATGGCTGGCACGCAACGATTTAAAGGTTAGATCAGGTCTTCCCGCTTTTTCTCTGGCTTTGCGGAACTGACCTTCCAGCGTTGTTTGACTCATAATCTTCACCCATCTTGGCGGGAACACCATGGCATCGGGATCAGTCCAGTCACAGTGCTGACGCAGATGATCACCAATCACGGGGATGAGCCCGTCCGGAATGAGCACACTGCGTATGCTGGAACGCGTCTTGGTATCGGCGATTCGCACGTGACCACGATCTGTTCGCCCTCGATTGACGGAATGCCTGACACGCAGCGTTCTCGACTTAAGATCGATATCCCCAACCTGCAGTCCGCACAATTCCCCGCATCGCAAACCCGCTGTAGTGTATGTCATCTGCGATAATGAAACCCCGGATTCAACTTGTAAGTGCAACGGCTGGTTTCGGGTCGGCTTGTTTTGATTATAGCTTGGCCATCTCCTCGTCCCATACCTCGTTGGGCGTTTTGTAGCCGAGGAGCTTCATGGGGGTGTCGTTGATCCCCCCGACGATCGCGTCGAGCTCGTCCTGCGTGAGATCCTCGAAACTGGTTCCCTTGGGCAGATAGCGGCGGATCCTGCCGTTCCTGTTCTCGTTGCCGCCACGCTGCCAGGAACCGTACGGGTCGGCGAAGTACGTGAGCATGCCCAGCGCCTCGTCCACCAGCATGTGCAGGGACGCCTCCGTGCCGTTGTCCCACGTGCGGTCGACGCGCGCGGCCGGCGGCATGCCCTTGAATATCTCGTACTCGGCCCTGGCCGTGGCGGACGCGCTCTTGTCGTCGACGAGCCGGGCGAACAGCCTGCGGCTCCTGCGCTCCACCTGCGTGTTCACGCAGCGCCTCGACGGCGCGGCGCCGACCACCGTGTCCGACTCGAAATGGCCGAACCCCTTCCTGGATCCGACCGCCTCGGGCCGGTCCGCGATGGGCACGCGCATCGGGATGCGCGGCCCTTTCGCCTTCCTGCCCTTTTCCCTCGTCCGGCGTTTCCTGCCGCGCGCCAGATACTGGCGCAGGTCCAGCGCCCGCTGCGGCTTGGCGTGGATCCACTGGTAAAGGCACTCGTGGCTGATCCGCATCGACGGGTCGCCGGCGCACCGGGCCTTCAACCGTCCCTCGACCGGTTCCGGGCTCCACCCCCTGCGCAGCGCGTCCAGCACCCAGGCGCGCAACGGGCCCGAGTCCATGCGACGCGGTTTCCTGGACTCGCGCCGACGCCGGTCGGCCTTTCTCTGCGCGGCCAGCGCCGAATAGAACGGACCCGAGGTCCACGGCCCGGTCTTCAGCCGTTTCGGCCGGTAGGGGCGGTACGACCCGTTCTCGTTGGACGCGAACCACAGGCCGCGCCTCAGCTCGCGGCTCACCGTGGACTTGTCCCGGCCGATCCTCTCCGCGGTCCGCCGAATGCCCGGACGCTGTTCGCAATGCAGCTTCTCGATCAGGATCCTCTCCTCGGACGACAGGTGCGAATACTGTTGACCCATGAGTGCAACACCTTCTTAAGTTAGAAACTGAACACTTCCAACCCTAGACAAGGTGTTGCACTTCTATTTAGAACCCGGGGCGCTTCTATTTAGAACTCGGGCGGTCTATCATTGCATCTATCTACGTTTCGCTATTGTGAGAAGGTGTTGTAAATGCCGATTGTCGCGGGATTCCGGCCGTTTTGTGATGCAGTGGCGACGTCGTGGCGGACGAGTGCGTATGCGTTGCGTAGGCGTCCGGTGCGTACGGTGGTGATGTGGCTGTCGATGTTGGTGATGATGGCGATGCCGTCGTTGCAGGTGTGGCTGATCGGTTGGGCGTGCGGCCCGAACGGTTGGGCGCGTCGAGCATGGTGTTCCAGGATTTCACGCACATCGAGGTGACCGTGCGCGAGTTCATCGATCCTGCTCTGCGGCAATCGGACGATGAGTTATGTGACGGGTTGCGTCATGCCCGCGCGCTCGACATCGTGGATGGGCTTCCCGGCGGCTTGGACACGCAGCTCGGTCAGGAGTGGGGCGGCGTTGGCCTGTCCGGCGGGCAATGGCAGCGGCTTGCGCTGGCCCGCACGTTCCTGTCCGGCAAGCCGTTGTGGATACTCGACGAGCCGACCGCCGCGGTCGACGCCACCGCCGAGGCCGCGATCTACCATGATCTGATCGCCAACCGTCCGGCGGGCACCACTGTGATCGTCATCAGCCACCGGCCCCGCGTGCTAACCGGCATGGACCGGATTATCGTCCTCGACCACGGCCACATCAATGAAACCGGCACCTACCGTCAACTGGTCGACAGCAACGGCACCTTCGCCCGGCTCGCACACGACAGCCTCGAATGAGCTCGATGGCATATCCGGTTGATTGTTGAAAACTCAGTGGCCGGCCGACAGATTCGTCCGACGAGGCTCGCGCGAGTGATCATAGCGCGGGTCGCGTCGGATATGCGGGAGATGGCGCGCCTTATATCAAAAGCGATGATTTTCGAATAAAGACACGGCCCCATCAGCAGGTCGCGGGTACTACAGTGGACCACAACGTTCCTCCCCCGATGGTTTGGGGAAACACAGAAAGAGGGAGGAACGATTCCAGGAGCATTCGCTCCGTTGCCATGCAGCAGTAAGGGGAAATTCATGACTGCATCAACCACCGCGGTACCATCAACGGTATCCGCCAGCACCGGAAAGTCCGGTAGCGCAACAACCAAACTCAGCCGCACGCTGGGATTCACCGATCTAGTCACCTATGGACTGATTTTCATGATTCCGGTGGCACCGGTCGCGTTCTACGGCTCTCAGGTCGCCGGCGCGCACGGTCTGGTGGCCACCGCGTATCTTATCGGACTCATCGCCATGCTGTTCACCGCGTACAGCTACACGCAGCTGGTCACGCTCAACCCGTTTGCCGGATCCGTATACAATTTCGTGCGTTAAGGCACCAACTCCGGCAGCGTGGGATTCATCGCCGGATGGAGCATCATCCTTGACTATCTGCTGCTGCCGGCCGTGACCACTCTGGTAGGCACCAGCTTCCTCACCTCGCTGGTACCCGGTGTGCCGGCTTGGGCCTGGACGATAGTGATCATCGCCGCCATCACCACTATTTCCGTATCATCACCTCGATTCTGATCATCGGCGTGATTTTCGTGGTGCTCACATTCCTTGCCGGATCGGTGCAGCCCGATTACACCAAAATCGATCCGAACAGCGGCTTCCTCGATATTCTGGGCATCGTAGGCGGCAAACCGTTGCAACTGTATGCCAGCATCGTGGTGGTGCTTTCGTTCTCGCTGGCCTCCGGTGAGGAATGCATCACTTCGGTGTCCCGCATCCTGTACGCGGTCGGACGCGACGGCATCCTTCCTCGTCGTTTCGGCAAGCTGAACGACAAGACCCATACTCCGGTGGTCGCCCCGCTTATCGGCACCGGCGTCAGCGTCTGGATCTTCACCGGTCTGGGGCCGCTCGCTTGGAGCGTCGGCACCGTTTGGTTGGTCGTCGGCCTGATCATCATTGCGATTCGCACCGGCTTCTTCCGCAAGAAGCTGGGTGCCAGCGAGAACCTTCAGGAGTATTTCGCCTGAATCGCGCTTGTCGTCCATCCGCATTCCGCCTCAGCTACTCATATCGATAACTTACTAACAATCCATTCATTGTCTTCTTACCAGTAAAGGAAACCGATAACGCCCGATTTTTTGCGCACTTTCGGATTCCGGGTCTGACGCAAGAGGGCATGGCCCGCGTCCTGTGTACGATTTTCATTCGCCAAAACAAAAAATCGCGTTTGGAAGACAGGAGACGGAACCAAGACCCTTGAACATCATACAGATCGACCAGAACCTGCTCGAGACCAGGCTCGACCGCCTGATCGCCGAGAAGGTCGCCGAGCTATTGAACGCGATGCTCGACGCCGAGGCCGACGAGATCGCCAACGCCGCCAAGTACGAGCGCACCGGGGAGCGGAAGGCGTACAGGGCCGGCCACTACGACCGGAGCCTGACCGCCAAGGCCGGCAGGCTCGCGTTGAAGGTGCCCAAACTCAAGGGCGCGGTCTTCGAGTCCGCGGTCATCGAACGATACCGGAGACGCGAGGAGAGTGTCGAGGAGGCCCTGATCGACATGTACCTGGCCGGCGCGTCCACCAGGCAGGTCGATGACATCGGCCAGTTGTCGTGGGGCGACCGCATGCCGTCCCAGACGTTGAGCGACAAGCTCAAGAAGGTGTACGGGGAGATCGAGGCGTGGCGCGCGAGGCCGTTGGAGGGCGAGTGCCCGTACGTGTTCATGGACGGCGTGTGGCACAAACGCTCATGGGGCGGCTCGGTCGAGAACGTGAGCGTCCTCGTCGCCATCGGAGTCAACGGGGAGGGGCACCGCGAGGTGATCGGCGTGGCCGAGGGCATGAAGGAGGATTCCGCCGGCCGGGAGCGGTTCGTCCGCTCCATGATCGAACGCGGCCTGAAGGGCGTGCGCCTGGTGGTCGGCGACCGGTGCGCCGGGCTCGTCGCCACGGTCGGCTCGATGCTGCCCAAGGCGAGATACCAGCGGTGCATGGTGCATTTCATGCGCAACGTGCTCTCGAAGACGCCGCCGGCCCACCGCGAATGGGCGTCCGCGGCCCTCAAGGCCATATTCGCCATGGAATCCCGGGAATCCGCCCTGGCCAAGGCCGAACAGGTCGCCATGGAGATGGAATCCAGGAGGCTCAAGGCCGCCGCGAACTGCCTGCGCGAGGGCGTCGGCGAGACGACGACCTACCTGCTGGACGAGTTCCCGGACGGGCACCGCAGGAGGATCCGCACGAACAACATGATCGAGCGGCCGGACAGGGAGATCCGCCGGCGCACGCGCGTGGTGGGCGGCTTCCCCGACGGGAACAGCGCGTTGATGCTCATATGCGCCCGCATCCGTCACGTCACCGCGAACGAATGGTCGACCCGCCGCTATCTCGACATGTCCCGGCTCGGTGACAACCTCGTGGAAGCGAACTGACTATCGCGCCATGGACGGCCATGATTCAAAGTGCGCAACTTTTCGGGCACTACCAGGAAACCGCCATGTCCAACTTCATTCCCAACACCGTTTCCGCAGAACGCAAGCCCGTGGACATCGTCACCGGCACCTATGTGGACTATGCCGGCGTGACCCGTGCCAAATCCGTTCCCGCCCGCAGGCGTGAAGCCTTCGAACGCAACGGATTGGGCGCCGCCCTGGTCTGGGTGGTGTTCGGCGCGGACAACTCGTTCGCCGAAAACGAGAAATTCAACGTGTCCGGCGATCTGCGCCTGCACCTTGACACTTCCGCTTCTGCATTGCGTGCCATGCGAGCGTGAAGCGGCGTTTCTCTGCTCGGTGCATGCCAACTTATACATGGATGTCAGCCTTGCCAATCCGCATATGGGAGCGCAGGTGAGGGAAGTGCTGCGCAATGTTCTGGCGTGGTGCCCATTTGACAAGTTGCTCTATGCGTCGGACGGCAACGGCATCAGTGAATTGCATTATCTGGCCGCGGTGCTGTTCCGCAGGTATATTGCGCGAATCGCCATCGACTGGGTATCGGATGGCGCATGGAACGCGAATCAGGCGAAACGGGTTATCGACGCCATCGCGCATGCCAATGCGGAACGGCTATACGGTTTGGCGTGAATGGGTACTTCGCCGGTGCCGTCACTTCCCGAGGAACGCCGGGATGGCTTCAGCCGCCGCGTATCCCTTGCGATACATCATTTCCAGGCCCTCGAAGTTCTTCTTCAGGGTGTTGAGACCATACAGGTCTTCGGGTGCGAGGATCAGCACTTTGCCTTCCGCCTCGTAATGCTTGGCGAGTTCGAGTTCGTCGTTGTAGGTCTTGTAGCGCATGCGCAGCTTCTCGGCTGCGGCGGGGTGGGAGCGTTCGAGGATGCGGGCCGGGGCCAGATCCCTCTGCTGCCTGCGCACTTCGTCACGCAGGCGGGACAGAATCAGGATCACACGATCATAGCCGTCATCCAGCGCCTTCTGTACCGGGATCGGATCGGCGATGCCGCCATCGAAATACGGCACGCCATCCACCACATACGGCTCGCAGGCCACCGGCACGGCGGACGAGGCCTTGATGATGTCGAAATCATCGAAGCGTACGCGTGATTTGTCGAAGTACTTGGTCGAGCCGTCTTCGGCATTGCAGGCCACCACAGTGAACCCGGTAGGATTGGCCTCGAACGCCGTGAAATCCAACGGGTTTTCGCCGTCGTGATTGCTCAGCGTGCCGTAGATGTAGTCGAGGTTGGCAAAGTTGTGGTTCTTGAAGAAGCTTTCCGCGCTCGCGTACTCCTTACGGAAGGCGTACTTGGTGTAGAAGGTGTGGTTGCGGCTGTGCTGGCGGGCGATGAATGAGGTCATATTGGCCGCGCCGGCGGAAACGCCGTAGCACATGTCCACGTCGATGCCGTCCTCCAGCATGCGGTCCATCACGCCGCAGCCGAAAATCGCGCGGAACCCGCCGCCCACATCAATCATTGCCGTCTTCAGTGCCATATCAGCCTCCTATTCATCATCATGCATTCGATCACGCATTCAGCAGGTCGCGTGAAAGCCGTGTAACACGTTCGGACAGATCGGAATTGGCGAGTTCCACGCCGCCGGTCGCGTCTTCGGGTGCCAGTTTGCCCAGGGACTCCAGCACCACGCCCAGATGGCGCACGGTGCCCTCATTGCCGTCGATGACAGCAGCCCGTTCGGGCAGCAGCTCGCGGAAGTAGTCGCGGTAGAACACGAAATGCGTGCAGCCCAGCACCACTGAATCGATGTGCTCCATGTCGTACTGGTCGAAGTAGCCATGCAGCGTGCGCATCACCAGGTCATGGTCGCCGAGCCGCCCGGATTCCACGATCTCCACCAAGTCGGGGCAAGGCTCCTTGAAAATCGTGTTGTAGGAATCGAATCGATCCATCAGTTTGGCGAACTTCCGCTCACGCAAGGTCAGGGGAGTGGCCGCCACAATCACCCTCTGGGGAATATGATGCGGGTCGGAAGGCACGTCGCCCCGGTCGCACGCCACTTTCAGGGCCGGCTCCATGCCGATGATCGGAATATCGTAGTGTTCGCGCAGATCGTTCACCGCGGCGGAAGTGGCGGTGTTGCATGCGATGACCACGGCCTTGATGCCTTGACGCACGAACCGTTCGACAATATCGAAACTCAGGGCCCTCACCTGCTCAGGCGTCTTGACGCCGTACGGGGCGTTGGCCGAATCGCCAAAATACAGCACATGCTCGGCCGGCATATCCTTGGCGATTTGGCGAGCCACGGAAATACCGCCAAGACCCGAATCGAATACGCCGATTGGAGCCGAAGAGCTCATGCCTGAATCCTCCCTATAGCCATGCCTGCAACCGTATGTTGCCGCGACCGATCACAAAGCCGATTGTTTTGCGGTGTTGTTTCGCTCCCTAGAGTACTCTGAAAGCCATGAGTCTTCCGCAACGAGTAACCAAGACACACGCAACCGGCAATGATTTCGTGGTGTATCTCGACAAGTCCGGCAAATTCGAGCCCACCGCCGATGAGGTCCGGTTCCTGTGCGACCGTCATTTCGGCATTGGCGGTGACGGCCTGATTCGCCTGACCAAGCCTGATTTCGTGTCTGATTTAAGCGATGATCAGCTTTCGGACGTACTGGCCGGGGGCGTGAAATGGTTCATGGACTATCGCAACGCGGATGGATCGTTGGCGGAGATGTGCGGCAACGGTACGCGCGCCATCACCTTGTTCGCTCAGCGCGAGGGCGTGGCCGACTCCACCGAGCCGTTCCGCCTCGGCACCCGTGCCGGCGTCAAGATTCTGACGCCACGCGGCAATATGAGGCCGTACGGAGCCAACGTGTTCCAGGTCGAAATGGGGGAGTGGAAGATCGGCGAAACCGACGCCTACGAGGTCACCATCCCCGGCGCTGAGGGCTCGGCGCGCGGCACGTTCGTGGATATGGGCAACCCGCACGTGGTCGCGGTGATCGAGGATGCCTTCGCGTCCCTGCCAGTGGTTGAATCACTGGATTTGGCCACCAAACCAGTGGTGGCTCCGGTCATCGAATCCGACCAGAATGTGGAATTCGTGCGGGTCGACGACATCGATCAGAACACCGGCGTGGGTGAAGCCACGATGCGCGTCAACGAACGTGGCTGCGGCGAAACCCTGTCCTGCGGCACCGGCCTATGCGCCACAGGCGTTGTGCTGCGGGCCAAGACCGGCATCAGCCACTGGGACATCACCGTACGTGGCGGCACCCTGCGCGTGGACGTCACCGACAGCGACGTGAAACTGACCGGAGCAGCCACGCTGGTCGCCGATATCGATTTGTTGTAAAGGAATCAGGCAGCGAACAGGGCCGCGCCTTCGGTGACGATGATGAGTACCACGATCGCCACGATCCACAGTATGTCGACCATGAGGTCGATGTTGAGGCGATAATACTTATTGAGTCCGGCCGGCACCGCCGCGACATCGGCCTCGCTGTCGCTATCATCAGCCGCCACAGCCTTACGTGACGGCAATCCCTGCACGGCCACGGTCGCATGGCTCAACGCCATGAACTGGATGGTGGTGGAGAACATCAGGGTCAGGCACCACGGGCACAGCGCGTGAATCACGAACAGCGACTGTGTGCTCAGCCAGTACGAGTAGGCCAAAGCGGCCAGTCCGCCCAGCCACGTGCAGGTCGCGAACCAACGCGGCACCTTCACACGAGCCAAACCGATCACCGCGATGGTAATGAACACCGATTCGGCGGCGATGCCGAAGAACGCGTTCGGATAGCTCAGCCCGCCGAACTTCACGATTTCCGCCTGCCAGGACTGGGCCACCGCCGAACAGGACACCACCGAGTTCAGATCGCAGCCGAGCGCGGACTCCGGATGCCTAGCCAACTGCAAAGTCTCGGCGGACAGAATGAGCGAGGCCCCCAATGCCACTGCCGAGGCGACCAGCATGATGAGATATGTCCAAGTGGCACTGTGGCGCCATCCAATCAACGGTCGCGCCTCCGCCAAGCCAAGCGGCGTGGTGTTCGTGGTGATGGATGATGTGTCGGTTGCGGTGTTACGAGTCATCATGTCCCTTTCGATAGCGCTGCGCTCCAGATTAGCCTCTGCGGTTGTCAGCTGAGTGCCGAATGTCTGGTCTTGGCCGTTGGCAGAAGGTGGCGACCTGTCTGCGCCTTGCGTGGGAATGCTGAGATGAGGTTACGATGGAAGGTATGACTGGATATGTGATGCCTTTGGAGCCGCCCGCCGTCGGGTGGGACATCCATTGCCATACCGTCTTCTCGGATGGCACGGAAACGCCGGTCACATTGGCCGAACAATCCAAGGCATTGGGACTCAAGGGCGTGGCCATTTCCGATCATGACACCACCGCCGGCTGGCCGGAGGCCGAAGCCGCAGCCCATAGGGTCGGTTTGCCGTTGCTCCGCGGCACCGAAATCACCGCCACGGATGAGAACGTCTCCGTGCACATGCTCGGCTACCAGTATGATCCCACGAATCAGCACATCACGGACTTGTTCGCCGATACTCGAGCCGCACGGTTGCAACGCACGCAGCGCATGGTCGAATTGTTGTCTCGTGATTATCCGATTACCTGGCAATCCGTGCTCGCCCAAGTCAAAGAGGGTGACAAAACCACCATTGGCCGGCCTCACATCGCTGATGCCTTGGTGAGTGCCGGCGTATATCGGACTCGTTCGGAAGCGTTTGCGGATGCGGTCAGCGCCTCATCCAAATACTATATTCCCACGCCTTCGCCGACCTCTCATGAAGTGGTGGCCGCCGTCAAGGGAGCGGGCGGTGTGATTCTGATCGCCCATGCCGGTGATGTGAGCCGTAACCGCAGACTGTTGTCCGATGACCAGATCGAGGCATTGATCAGCGAGGGATTGGACGGGCTGGAGGTATGGCACCGTGGCAATTCACCGGAGCAACGAGAACGGCTGCTCACCATCTGCCGCCGGCACCAGCTACTGGTCACCGGCGGATCTGACTGGCATGGCAAAGGCAAACCGAACAAACTGGGGGAGAACCTCACCGATGAGGCCACTGTCGAAGAGATCGTTCATCGCGGCGTGCTTCCGCTATATCGGTGATTCGGCAATAGAAAAGCGTCCTTGAGAAAATGCTCAAGGACGCTTATGCGCGATTCATGGTCACAGCGTGCCGAAGCCGACGGCGTGCTTGGTTTCGGAGCCGATGATCGCGTAACCGAGTGCCTTGGCGGGCACGATGATGCGACGGCCCTTGTCATCGGTCAGATCGATCGTCGCGTTGTCGGCCACGGCCTGCGCGATGGCCTGGCTCACATTGTCGGCTGATTCGTCGGTGCTGAAGTTCACCGGTCGTGCCACGTTCTGAATGCCCAGTTCGATATCCATATAAGGCTCCTTGTTCTGCCGTCTTTGTGACGAACATCATGGTAAGTGGCCGTCGCCGGCCGAGGTTCTGTACTCTATTGTGCCGCGTGTCTGCGTCGTCATGTGCGGTGTTACGCGCTCGGCGTGGCGCGGAACACCGCACACGACATTATTTGGATGATGCGGATGATTCGGCCAGCGGATTGCCCTCGCTGTCATACCCGTCCAATCCGGCACGGGCATCGCGCAGAGCGCGTTCTTCCCGCTCCAGCAGCGGAATCACCGTGGTTTGGGCACTCGAGGCTCCGTGCTGAACGAGACTGTCCGGAGTATCGTCATTCACCGCATCGTCGGTCGGAGCGGCGGATTGAGACGCAGGGGAAGCGTCGGTTGACGTCGTGCCGCTATGCCCGTTCATACTGAGGAGCTCCTTCAGCGTGATCGTCACCGAAGAATGGGAAGCGCCATGTGAGGGCTGCGGTTTGGTCGATCCTGTACCGGTTGCGGTGCCGGAGACACTCGCTTGCGGGTGATTGGCGGTCCGGTCAGCATCGGGTTCGACTTCCGGGGTAAGATCCACGTCGCCAGCGGCCACGATGTCAGCGGAACCGGTGCGATCGGGATCGGGCGTGTCGTCCGAGACCTCGGCCGCCGCGGTACCGGTGTCGGACTGCTGCGGTTGTGCGGGTACCTGCGTGGCGGGTGCCTGATGACGGTCGTCCTGCAACAATGTGCCGACGGTGATTGTGGAAGGCGAACCGGGCTTCGTCGACGCGGCGGCGGCCGACCCTGCGGCTGAGGCCGATGCCGGAGTGTGCTTGATCACGCCCAACTGGTGTGCGAGTCGTTCGACCTGTGCCTTGAACTGCATGATGCGATTGTTGTCCGCACGGTTCAACGCCTGAATGAATTCGCCCACCTGTTCCATCTGCAACCACAGGTTGGCCCTGAGCATGATGAGATCGTCAAGTCGAGAGCCCATCATGCGGCCGTATGCGGAAAGCACGGCGTTGCGATGGGATTCGTCGAGCTTGCCGAAAATCCAGGCAAGGTCTCGTGCCGGATCGTTGACCTGCATATCCTGCCAGTTGGTCACCGTGGTGATGGTGGAACCGGAGAACAGGAAGTCGCCGTCGGAGAATCCGCCGTGAACCGTGCAGGTGGAGAACGACCACAATCCCTCGGTGTCCATGATGCGCGCCCAGCTGTCGGTGATTTCTTGGGGAACATGGCCGGCGGAGCGTAAGCGGCGAATCCAGACGGTCAGCTGCGAACGAATCTGACCGGTGGTGACTACCGGATATTTGGCATTGGCCAGAAAAGTCGAAGGCAGGCGATGAATGGCTCCGATGGCGGTGCCGACGGCCGCGCAGTCATCCAATGTCAACAGGTCGAGAGGACGTGCCTGACCATCACGGTGGACGGCGATCATCACGGTCGTCTCGCCTGTGGGACCGGGCTTGCGCGGGGTCAGCGGTGTGGACTCCGCCTGGGCCTGCTGCCCCACGGCCTGTGCGGTGGCCGTCTGGCCGGGTTGGGAAACGTCTCCCGGGACGAATGCGACCACACGGTCCATATCGAAGCCGAGGCCACCAAGCTCGCGCGCGGCTGCCAGTGTCTGCGCCGCTTTCACACGGCGGATCAGACGTGTACGCCCTTCCCTGGTGTCAGTGGCGTATACGTCGTACAACTTGCCCGAAGCATCTTGGATCACGGTCTGATCGATGCCTTTGGCCTCGTCGGTTGCGCTGGCCTGCACGTTCTCGCGTACGCCGGCCACCCCCAGATTCGGCAGGACGGCTGAGGCGAGTGCCGCCAACATATAATCGCTACGTTTCATCACCCTTCCACACTAATACATCCGTGGCGATTCGCACCGCAGAATGACACGCAAAACGCATGATTCTGGCGATGTTTTGTCGTGAGCCCGATTCAGCCATAGGCGTGAGTCGTGCCGTGAGCGCGAATCGTGCCACAATGGACGCATGGAACAGGCGCAGGGGATTCTTGAGGGGCTCGATGAGCGGCAGCGTACCGCCGCGACTACGTTGCAAGGGCCGGTGCGCATCATCGCCGGCGCAGGTGCTGGTAAAACCCGCACGGTCACGCGGCGGATCGCCTATGCCTGCGCCACCGGGGCATGGAAGCCGGAGCGGGTGCTTGCCGTCACCTTTTCGGTAAAAGCGGCGGCGGAAATGCGCGCACGGTTGGGCCAGCTCGGCGTAGGGGGAGGTACTGGACGTTCCGGTTCGGGTGCGGGAACTGCCGGAGTCACGGCCGCGACCTTCCACTCAGCGGCATTGCATCAGCTCAACAGCGTCTGGTCAGACATATGCGAGGCTCCATTCCCGCATGTGATCGAAGATCAGCGTGACGTCGTCTCCCGCGCGATCATCCGCGCCACCGCACGTACCGATGCCGATCCGCTGACCGTTCGCGATGTGCTCGCCGAAATCAATTGGGCCAAAATCTCGTTGGTGGCGGTGGAAGATTATGCACGGACCTGTGCCATCGCCCATAGGCAACCGCCCGCCGGACTCGACACCGCTCGGTTCGCCGACGTCTACAGCGCCTACGAGCAGGAAAAGACCTCGCGTGGCGAAATCGATTTTGACGATATTCTGCTGCTCGTATGCCATATCATGGATGATTTTCCCGAAGTCGCCGCCCAAATTCGTTCCACCATCGGCTGGCTCACCGTCGACGAGTATCAAGACGTCTCGCCCCTGCAACACAGGCTGCTGACCCTGTGGCTGGGCGGGGGAGGGCCTGACGGCAAGAGCGCGATGAACCGCAACGTATGCGTCGTGGGCGATCCGGCCCAGACCATCTACTCGTTTGCCGGTGCCTCCAGCTGGGATCTGCTGCGTTTCGCCGATGAATTCGGGCCGCTCGCCGCCGATGTCGATCTCAACACCGACTATCGTTCGACGCCGGAAGTCGTGAACCTCGCCAACCGGGTGCTTGCGGCCGCGCCGAACCGTGAGGATTACCTGAAACTGGTTTCCGCCCGCGAATCCGGCACGCGCGTTACCCGAACCGCTTATGAGAGCGATATGAAAGAGGCGCAGGGCGTGGCGGCACGCATCGCCCGGTTGGTTGCCAACGGGGCCAAGCCGTCCGATTGCGCGATCCTCACCCGCATCAACGCCCAACAGCCGGTATTCGGTGCCGCCTTGCGCGCTGCGAGACTGAAATACCGCGTCCGCAAGGATGCGGGATGGCAATCATCCGCGCTCGCCGACGATGCCGCGTCCAAACGCGCACTATTGGAGGCGATGGGTTTGGACGCCACCGGACTTGTCGCAAACGACGATCCCGGGGTTACGATTTCCACGATCCACGCATCCAAGGGTCTGGAATTCAAGCACGTGTTCCTGATCGGCTGTTCGGAAGGGCTCTTGCCGTACGGTTCGCCGGAAACGGGGGATGCGCTGGAAGAGGAACGCCGGCTTATGTATGTGGGCATCACCCGAGCTGAGGATTCGCTGCATCTGTCGTATGCGCGGACCAAGGATGGTTATGGAGCGCAACACAGACGCCCATCACGATTTTTGTGACGGGCGTCGTTCATGCATACTGAATGCTCCTGAACATTCAGGAGCGGGAATTGGCTGAAGGCCGGTTGACTATGCCTGCGTATCCTCCGAGTTGCCGTTTTCACTGTCTTCGCCATCTTCGCCGAGAAGCTTGGACAGTTCGGCATCCCAATCGATATCGCCGGTCTTGCCATCTGCGGCAGGGTGGGAGGCGGAACCGTTGGCATCGGAAGAGGAGCCTGAAGGGGCGTCGGATGACGGAGACGCGCCATCTGCGGGCTTGTCGCTAGGCAGCGAAGGCAGCAGATCGGGATGCGACCACTTGGCGTCACGGCCTTCAGGGCCTTCGGCGGCGGTGATCATCTCCCACAATCCGGCGGCCTCGCGCATGCGCTTGGGGCGCAGCTGCAAACCGAGCAGACTTTCGAACGTACGCTCGGCGGGGCCACCCATCGCGCGCTCGCGGCGCATCATCTCACGCAACTGTTCGATATGAGGCAGATGGGCCATACCGGCGCGCCACACCACGCAATCCACCCAGCCCTCGACCATCGCCAGCAGCGATTCCAGCGAAGCCAGCGCCTCGCGCTGTTCGGGAGTGTCGGGGATGCCGACCTTGGTGAGATTCACCGCGCCGGAAATCGACTCCGGATCCATCGACGTGGCGTCACGCAGCTGTTCCTCCATCGCATCCAGATCGATGGAGATGCCGCGTGCGTACTTGCCGATGAGCGCCTCGAAACGCGGCATCAGCCACGGTACCGAGGCATACAGGCGGGCGTGAGCCATTTCCTGCAGGGCCAGGAAGGAAAGCACTTCAGATTCGGGAATTTTCTCGGTGGTCTCGAATCCGGAGAGCGCAGCCTCGAACGCGGCGGCGTCGGCGGAAGCATCGGAGCCGGAGACTTGGGCGGTACCGTCAGTTGCCGGAGTATCGCTGTTGCCGGCCGAAGTGAAGCCAATGGGATTGGCGGAAGCGTCGGTGGATGTGGAGAACGGATTGGTCGCGTCCACCGAAGTGCCGGTCGTGTCGGCCTTGGCCGCAGAAGCCTCACCGTTCAGCATCTTCGCGTATTCGGTGGCGTTCTGGGCAATCAGTCCACCAGCCGGATTCTTCAGCAATGCGATGCCCTGATCGAAACTGCCATGCACTTCATGGCTCAGATTGCCGGCCGCATGCCCCAACTGCATGGCAAAGGACGTGTTGCCCAGCAGCTTCATCAGCTGGGCTGGATCTTTCATGCCGTCGGGAATCGGAATCGGCACCGGTCCGGCGAACATGCCGGCAATCTCGCCATCGCCGAACGCGCCGCCAAGACGCTCCGAAATCACCGAAGCCAAAGCGTCGTTCATCGACTCGGCCACAGGAGCTGCGAACTTCGCCCACTGGTCGATGGTGCCTTCCACCCAGCCGGCGCGGGTCAGCACATCCGGATCGCCGGGCGCGGGATTGAACTCGCAGGCGGTATCCAGCCACAGGTTCGCCTCACTCATCGCGCGGCGAGCCGCCTCGCCATCCACGGCGGACACGCTGGACGCGGAACCGGAGGCGTTGGCCTGCTGCAAGGCAATCGACTTGGCGAGCTTGACGTTGATCGGCCCTTCCTCGACAGTGCGCTGCATATCGCCCATCGTGTTGAGTCCGCCGGCGCTGAACGCGGCCATCATCTGCTGGACTTCGGATGGATTGGGCAGCCGGCTGGGGTCCTGACTCATCAGCTGTTCACGGATCTCCTCAGGCAACTGGCTGATCTGCTGCCAGGCCATCTCGCCCTGAATGGGGCCGAAGCATTTGATCAGCCACTCGTGAATCGCGTTGTCGTCCATGCGTATCCTTCTTTGCCGCGGTGTGTTACCCCAAGTGTAGGGTCTGCCCGGGCCTGTTCGCTCGTGGCCGAGCAATATTTTCGGTTTATGTTCGTTTTCGGCTGATTTCGGCCCTCCGCTTACACTGTAGGGTATGTTTGCACGCCACAGGAATCAGGAACCAGACTTCGTCCAGGAGCAGAAGAGCCCGACTGCGGATTCGGAAGCGGGGGATGGGCGCATGCCATCGTTCGAAGTGAAGCATGATTCGCGCCTATCTCGTGGAATCAGCCGTGCTCGGGCCTATGCGGCCGCTCGTCCGAAACGCCATTTCGTCGGTGCATTCGCCGTGTTGCTTGGTGTGGTGATTCTGCTGCTGCCCAGCCCGTACGTCATCGAGATGCCCGGACCCACCCAGGACGTGCTGGGCAAGGTCGAGGATGGTGCGGTTATCGACATCACCGGTACCGGCGTGACGACGTATAAGGATTCCGGCAAGCTGCTGCTGACCACGGTGAACGCGTCCGGCGTGCCCGGGTACCCGATCGTCAACGCGCAGGCCGTCTGGGGTTGGGCCAATCCGCAGGTGGAGGTCATGCCGCGTGAGGCCACGGTACCGGTGGGCCAGAGTGCGGACCAGTATCAGAAGAAAGTCGAACAAGACATGGCCGGTTCCCAGGATTCGGCCAGTGCCGTCGGTCTGGCGTATGCCAAAGCCCATGCGGACGAACTGGGCATTGACGCCAGTGCATTGCAACACGCCAAGGTGACGATGCACGTGGACAGCATCGGCGGACCGTCCGCAGGCATGATGTACACGCTCGGTCTCATCGACAAACTCACCCCCGCCAACGAGAGCGGCGGCAAGACCATCGCCGGCACCGGCACCATAGACAAGGACGGCAAAGTCGGCAGAATCGGCGGCATAGCGCTGAAGATGCTTGGTGCCAAGCGCGATGGCGCCACATGGTTCCTGGCCCCCGCGTCGAATTGTTCGGATGTGGCCGGCCGCGTGCCGGATGGTCTGCGCGACGTCAAGGTCGCCACGCTGGACGAGGCGTATCAGGCGTTGGTGGCCATTGGCAAGGGGCAGGCCGACGATTTGCCTCATTGCGAGGCATGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP010411|1665293:1683865|1682983_1683865_+|WP_060620822.1|protease|DBSCAN-SWA
MPSFEVKHDSRLSRGISRARAYAAARPKRHFVGAFAVLLGVVILLLPSPYVIEMPGPTQDVLGKVEDGAVIDITGTGVTTYKDSGKLLLTTVNASGVPGYPIVNAQAVWGWANPQVEVMPREATVPVGQSADQYQKKVEQDMAGSQDSASAVGLAYAKAHADELGIDASALQHAKVTMHVDSIGGPSAGMMYTLGLIDKLTPANESGGKTIAGTGTIDKDGKVGRIGGIALKMLGAKRDGATWFLAPASNCSDVAGRVPDGLRDVKVATLDEAYQALVAIGKGQADDLPHCEA
>NZ_CP010411|1665293:1683865|1673563_1674358_-|WP_060620815.1|DBSCAN-SWA
MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRALSFDIVERFVRQGIKAVVIACNTATSAAVNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRVIVAATPLTLRERKFAKLMDRFDSYNTIFKEPCPDLVEIVESGRLGDHDLVMRTLHGYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEDATGGVELANSDLSERVTRLSRDLLNA
>NZ_CP010411|1665293:1683865|1672073_1672349_+|WP_129558976.1|DBSCAN-SWA
MSNFIPNTVSAERKPVDIVTGTYVDYAGVTRAKSVPARRREAFERNGLGAALVWVVFGADNSFAENEKFNVSGDLRLHLDTSASALRAMRA
>NZ_CP010411|1665293:1683865|1677566_1679237_-|WP_060620819.1|DBSCAN-SWA
MKRSDYMLAALASAVLPNLGVAGVRENVQASATDEAKGIDQTVIQDASGKLYDVYATDTREGRTRLIRRVKAAQTLAAARELGGLGFDMDRVVAFVPGDVSQPGQTATAQAVGQQAQAESTPLTPRKPGPTGETTVMIAVHRDGQARPLDLLTLDDCAAVGTAIGAIHRLPSTFLANAKYPVVTTGQIRSQLTVWIRRLRSAGHVPQEITDSWARIMDTEGLWSFSTCTVHGGFSDGDFLFSGSTITTVTNWQDMQVNDPARDLAWIFGKLDESHRNAVLSAYGRMMGSRLDDLIMLRANLWLQMEQVGEFIQALNRADNNRIMQFKAQVERLAHQLGVIKHTPASASAAGSAAAASTKPGSPSTITVGTLLQDDRHQAPATQVPAQPQQSDTGTAAAEVSDDTPDPDRTGSADIVAAGDVDLTPEVEPDADRTANHPQASVSGTATGTGSTKPQPSHGASHSSVTITLKELLSMNGHSGTTSTDASPASQSAAPTDDAVNDDTPDSLVQHGASSAQTTVIPLLEREERALRDARAGLDGYDSEGNPLAESSASSK
>NZ_CP010411|1665293:1683865|1679382_1680957_+|WP_060620820.1|DBSCAN-SWA
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLAVTFSVKAAAEMRARLGQLGVGGGTGRSGSGAGTAGVTAATFHSAALHQLNSVWSDICEAPFPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARTCAIAHRQPPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDDFPEVAAQIRSTIGWLTVDEYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEFGPLAADVDLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGTRVTRTAYESDMKEAQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDAGWQSSALADDAASKRALLEAMGLDATGLVANDDPGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPETGDALEEERRLMYVGITRAEDSLHLSYARTKDGYGAQHRRPSRFL
>NZ_CP010411|1665293:1683865|1672683_1673532_-|WP_060620814.1|DBSCAN-SWA
MALKTAMIDVGGGFRAIFGCGVMDRMLEDGIDVDMCYGVSAGAANMTSFIARQHSRNHTFYTKYAFRKEYASAESFFKNHNFANLDYIYGTLSNHDGENPLDFTAFEANPTGFTVVACNAEDGSTKYFDKSRVRFDDFDIIKASSAVPVACEPYVVDGVPYFDGGIADPIPVQKALDDGYDRVILILSRLRDEVRRQQRDLAPARILERSHPAAAEKLRMRYKTYNDELELAKHYEAEGKVLILAPEDLYGLNTLKKNFEGLEMMYRKGYAAAEAIPAFLGK
>NZ_CP010411|1665293:1683865|1677193_1677418_-|WP_007054042.1|DBSCAN-SWA
MDIELGIQNVARPVNFSTDESADNVSQAIAQAVADNATIDLTDDKGRRIIVPAKALGYAIIGSETKHAVGFGTL
>NZ_CP010411|1665293:1683865|1676239_1677133_+|WP_060620818.1|DBSCAN-SWA
MEGMTGYVMPLEPPAVGWDIHCHTVFSDGTETPVTLAEQSKALGLKGVAISDHDTTAGWPEAEAAAHRVGLPLLRGTEITATDENVSVHMLGYQYDPTNQHITDLFADTRAARLQRTQRMVELLSRDYPITWQSVLAQVKEGDKTTIGRPHIADALVSAGVYRTRSEAFADAVSASSKYYIPTPSPTSHEVVAAVKGAGGVILIAHAGDVSRNRRLLSDDQIEALISEGLDGLEVWHRGNSPEQRERLLTICRRHQLLVTGGSDWHGKGKPNKLGENLTDEATVEEIVHRGVLPLYR
>NZ_CP010411|1665293:1683865|1665293_1666559_-|WP_060620154.1|transposase|DBSCAN-SWA
MTPPNEVVWAGIDTHTDTHTIALLDERGRPLGAETFTADPDGYDRLIGMLPGPGRVAAVGVEGTNSFGAALARRLTAAGYEVREVLRPRRSVRRRDGKSDPLDAVAAARSVMAGDGTSLPKSSDGWVEALRHLNAQRSQLVSAMTAISNSTNGLLVTAPEPIRERYRGLRSETRMNRLAECRPAGGLVERSVLAALKSAAKAWKALKRQAGLLEERMRLILEEHARPLLDMYCAGAVIAATLAIVAGDNPERIRSEAAFAKLCGVCPIPASSGRTNRHRLNKGGNRQGNMALHRIAIVRLRYHKPTRDYMAKKTREGKGKLEIIRCVKRFIAREAYRALISIRNGEVGRGTPAERGAKLRELRVSRNITQQQIGEALCVPSSRISEIERGARDLPELEQRAIQWIHSTTNPKQHTQTLDNV
>NZ_CP010411|1665293:1683865|1672308_1672662_+|WP_129558977.1|DBSCAN-SWA
MTLPLLHCVPCEREAAFLCSVHANLYMDVSLANPHMGAQVREVLRNVLAWCPFDKLLYASDGNGISELHYLAAVLFRRYIARIAIDWVSDGAWNANQAKRVIDAIAHANAERLYGLA
>NZ_CP010411|1665293:1683865|1681026_1682763_-|WP_060620821.1|protease|DBSCAN-SWA
MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSAGGLNTMGDMQRTVEEGPINVKLAKSIALQQANASGSASSVSAVDGEAARRAMSEANLWLDTACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMNDALASVISERLGGAFGDGEIAGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNPAGGLIAQNATEYAKMLNGEASAAKADTTGTSVDATNPFSTSTDASANPIGFTSAGNSDTPATDGTAQVSGSDASADAAAFEAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLMPRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAVNLTKVGIPDTPEQREALASLESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMMRRERAMGGPAERTFESLLGLQLRPKRMREAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPADGASPSSDAPSGSSSDANGSASHPAADGKTGDIDWDAELSKLLGEDGEDSENGNSEDTQA
>NZ_CP010411|1665293:1683865|1667458_1668520_-|WP_060620808.1|transposase|DBSCAN-SWA
MGQQYSHLSSEERILIEKLHCEQRPGIRRTAERIGRDKSTVSRELRRGLWFASNENGSYRPYRPKRLKTGPWTSGPFYSALAAQRKADRRRRESRKPRRMDSGPLRAWVLDALRRGWSPEPVEGRLKARCAGDPSMRISHECLYQWIHAKPQRALDLRQYLARGRKRRTREKGRKAKGPRIPMRVPIADRPEAVGSRKGFGHFESDTVVGAAPSRRCVNTQVERRSRRLFARLVDDKSASATARAEYEIFKGMPPAARVDRTWDNGTEASLHMLVDEALGMLTYFADPYGSWQRGGNENRNGRIRRYLPKGTSFEDLTQDELDAIVGGINDTPMKLLGYKTPNEVWDEEMAKL
>NZ_CP010411|1665293:1683865|1674465_1675359_+|WP_060620816.1|DBSCAN-SWA
MSLPQRVTKTHATGNDFVVYLDKSGKFEPTADEVRFLCDRHFGIGGDGLIRLTKPDFVSDLSDDQLSDVLAGGVKWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRAGVKILTPRGNMRPYGANVFQVEMGEWKIGETDAYEVTIPGAEGSARGTFVDMGNPHVVAVIEDAFASLPVVESLDLATKPVVAPVIESDQNVEFVRVDDIDQNTGVGEATMRVNERGCGETLSCGTGLCATGVVLRAKTGISHWDITVRGGTLRVDVTDSDVKLTGAATLVADIDLL
>NZ_CP010411|1665293:1683865|1675364_1676102_-|WP_060620817.1|DBSCAN-SWA
MTRNTATDTSSITTNTTPLGLAEARPLIGWRHSATWTYLIMLVASAVALGASLILSAETLQLARHPESALGCDLNSVVSCSAVAQSWQAEIVKFGGLSYPNAFFGIAAESVFITIAVIGLARVKVPRWFATCTWLGGLAALAYSYWLSTQSLFVIHALCPWCLTLMFSTTIQFMALSHATVAVQGLPSRKAVAADDSDSEADVAAVPAGLNKYYRLNIDLMVDILWIVAIVVLIIVTEGAALFAA
>NZ_CP010411|1665293:1683865|1670829_1672008_+|WP_129558975.1|transposase|DBSCAN-SWA
MNIIQIDQNLLETRLDRLIAEKVAELLNAMLDAEADEIANAAKYERTGERKAYRAGHYDRSLTAKAGRLALKVPKLKGAVFESAVIERYRRREESVEEALIDMYLAGASTRQVDDIGQLSWGDRMPSQTLSDKLKKVYGEIEAWRARPLEGECPYVFMDGVWHKRSWGGSVENVSVLVAIGVNGEGHREVIGVAEGMKEDSAGRERFVRSMIERGLKGVRLVVGDRCAGLVATVGSMLPKARYQRCMVHFMRNVLSKTPPAHREWASAALKAIFAMESRESALAKAEQVAMEMESRRLKAAANCLREGVGETTTYLLDEFPDGHRRRIRTNNMIERPDREIRRRTRVVGGFPDGNSALMLICARIRHVTANEWSTRRYLDMSRLGDNLVEAN
>NZ_CP010411|1665293:1683865|1666812_1667391_-|WP_060620807.1|integrase|DBSCAN-SWA
MTYTTAGLRCGELCGLQVGDIDLKSRTLRVRHSVNRGRTDRGHVRIADTKTRSSIRSVLIPDGLIPVIGDHLRQHCDWTDPDAMVFPPRWVKIMSQTTLEGQFRKAREKAGRPDLTFKSLRASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQHRSQVVNQLVDEFIHSQYESTIDDVDNGYAGF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1658609:1658622	attL	NA	NA	NA	NA
WP_060620154.1|1665293_1666559_-|transposase	IS110 family transposase	NA	NA	NA	NA
WP_060620807.1|1666812_1667391_-|integrase	site-specific integrase	NA	NA	NA	NA
WP_060620808.1|1667458_1668520_-|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.1e-29	28.8
WP_129558975.1|1670829_1672008_+|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.6e-50	33.9
WP_129558976.1|1672073_1672349_+	hypothetical protein	NA	NA	NA	NA
WP_129558977.1|1672308_1672662_+	amidohydrolase family protein	NA	NA	NA	NA
WP_060620814.1|1672683_1673532_-	patatin family protein	NA	NA	NA	NA
1672971:1672984	attR	NA	NA	NA	NA
WP_060620815.1|1673563_1674358_-	glutamate racemase	NA	NA	NA	NA
WP_060620816.1|1674465_1675359_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_060620817.1|1675364_1676102_-	vitamin K epoxide reductase family protein	NA	NA	NA	NA
WP_060620818.1|1676239_1677133_+	PHP domain-containing protein	NA	NA	NA	NA
WP_007054042.1|1677193_1677418_-	DUF3107 domain-containing protein	NA	NA	NA	NA
WP_060620819.1|1677566_1679237_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
WP_060620820.1|1679382_1680957_+	ATP-dependent helicase	Q331U3	Clostridium_botulinum_C_phage	1.8e-17	21.1
WP_060620821.1|1681026_1682763_-|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_060620822.1|1682983_1683865_+|protease	Lon protease	NA	NA	NA	NA