Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011868 Pseudonocardia sp. HH130629-09 chromosome, complete genome 2 crisprs csa3,DinG,WYL,DEDDh,RT,cas3 0 0 21 0
NZ_CP011869 Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence 0 crisprs PrimPol 0 0 7 0

Results visualization

1. NZ_CP011868
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011868_1 2501083-2501497 Orphan NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011868_2 4087853-4087957 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 638219 : 665177 28 Bacillus_phage(33.33%) transposase,integrase attL 659157:659176|attR 668983:669002
DBSCAN-SWA_2 694039 : 743896 46 Bacillus_phage(28.57%) tRNA,transposase,protease NA
DBSCAN-SWA_3 855028 : 917084 56 Shigella_phage(18.18%) transposase NA
DBSCAN-SWA_4 928041 : 972145 40 Paenibacillus_phage(12.5%) transposase,integrase attL 949906:949925|attR 976985:977004
DBSCAN-SWA_5 1002562 : 1047774 36 Shigella_phage(28.57%) bacteriocin,transposase NA
DBSCAN-SWA_6 1315211 : 1434679 112 Mycobacterium_phage(33.33%) tRNA,transposase,integrase attL 1333746:1333764|attR 1361771:1361789
DBSCAN-SWA_7 1858853 : 1914877 46 Enterobacteria_phage(22.22%) transposase NA
DBSCAN-SWA_8 1962621 : 1995204 33 Mycobacterium_phage(25.0%) transposase,integrase,protease attL 1963931:1963950|attR 2004500:2004519
DBSCAN-SWA_9 2034110 : 2068568 30 Burkholderia_virus(12.5%) transposase,integrase attL 2026270:2026288|attR 2080873:2080891
DBSCAN-SWA_10 2826831 : 2851851 20 Gordonia_phage(25.0%) transposase NA
DBSCAN-SWA_11 2983879 : 3006095 14 Staphylococcus_phage(50.0%) transposase,protease NA
DBSCAN-SWA_12 3762358 : 3783009 12 Catovirus(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_13 3823142 : 3883249 53 Planktothrix_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_14 3931889 : 4002446 46 Shigella_phage(22.22%) transposase NA
DBSCAN-SWA_15 4229321 : 4281456 42 uncultured_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_16 4522540 : 4547409 25 Enterobacteria_phage(25.0%) transposase,integrase attL 4516338:4516353|attR 4533306:4533321
DBSCAN-SWA_17 4597027 : 4689002 76 uncultured_virus(15.79%) tRNA,transposase NA
DBSCAN-SWA_18 5206722 : 5263721 58 Shigella_phage(11.11%) protease,transposase,integrase attL 5194439:5194456|attR 5250728:5250745
DBSCAN-SWA_19 5396019 : 5497979 92 Mycobacterium_phage(23.08%) tRNA,transposase,integrase attL 5395941:5395994|attR 5495801:5498051
DBSCAN-SWA_20 5663925 : 5771096 76 Tupanvirus(22.22%) tRNA,transposase,integrase attL 5743282:5743299|attR 5776261:5776278
DBSCAN-SWA_21 5814444 : 5846865 31 Cedratvirus(25.0%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP011869
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 1859 1 Bandra_megavirus(100.0%) NA NA
DBSCAN-SWA_2 6553 : 7504 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 15628 : 16600 1 Sinorhizobium_phage(100.0%) NA NA
DBSCAN-SWA_4 20262 : 128692 97 Mycobacterium_phage(42.86%) integrase,transposase attL 25976:26035|attR 103471:104840
DBSCAN-SWA_5 131975 : 133988 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_6 219225 : 220516 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_7 230365 : 233775 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage