CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012514	Salmonella enterica subsp. enterica serovar Thompson strain RM1986 chromosome, complete genome	3 crisprs	WYL,DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	0	24	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012514_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012514_1

2925341-2927019

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

27 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP012514_1

>merge|NZ_CP012514|1|2925341-2927019|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGTTGGCGCGGGGAACATTTTTCAGCCCTTGCCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACATGGATGGCTCATATCCGGTTTCTGTTTCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTCGGTAACGTCTGGATTATTTTCTGAGGGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGTGCTGCTGCTGATCAGTTTACCCGCTGGGTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGAATAATCTCTAATAGTCTCAATTCGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGCCGATCGATGGCAAAGTTACCGATCCCTATCCCGGTTTATCCCCGCTGGCGCGGGGAACACTGATATTCCGGAACCTGACCCGCAACTACAGTCGGTTTATCCCCGCTGGCGCGGGGAACACACGTCGCTGTTAATCTCCTCGTTAAGAAGCTGCGGTTTATCCCCGCTGGCGCGGGGAACACCCCGACAGTTGCTCAGGTGGCTGCCGCCAAGGCGGTTTATCCCCGCTGGCGCGGGGAACACGACGACAAAATTAATATTGTTGGCTGGCGTGTCGGTTTATCCCCGCTGACGCGGGGAACACCGTAAATTTTGCTGTAATCAACTGTGCTGTCCCGGTTTATCCCCGCTGGCGCGGGGAACACTTCAGAGAATTGCCGCCAATAGAACAGCGCAACGGTTTATCCCCGCTGGCGCGGGGAACACGTCTCCGCAAAGGAAGCAGAGCTGTTCTGCGACGGTTTATCCCCGCTGGCGCGGGGAACACGCTGTCGTATATCCGTTACGCAACCCGCGTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACGCTTGCCAGTGGATTTTTGGTTATCTATGTAGTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAATGCAGCCCCTCTAAAATTGTTGCCCGCCGGTTTATCCCCGCTGGCGCGGGGAACACACTGGAGGAGAATTTGATGCAGGTGAAGCGTCCGGTTTATCCCCGCTGGCGCGGGGAACACCAGTGGTGTTTAAGCCCGACGTCGGCAACAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGTGAGTTCGGCAAGAAAAATGTGGTCCGGCTTCGGTTTATCCCCGCTGGCGCGGGGAACACTAATACTGATTATCTGCTAACACACGGCTCTACGGTTTATCCCCGCTGGCGCGGGGAACACTACAGTAAACCAATGCCATGCCAACATCGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACTGCTACAAATGGCACTCCATTTATTATTCCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCAAAGTTAGCGAGGTTTGACGCATCAACCAAACGGTTTATCCCCGCTGGCGCGGGGAACACGCCACGACGTTTGCCTGTGTCCCGATAGCCTCCGGTTTATCCCCGCTGGCGCGGGGAACACATCAGTCCGGGCGCGCAGTTTACGTCGTACCGCGGTTTATCCCCGCTGGCGCGGGGAACACGCGACGACTGAAAAATGGCGGGGTAATAAACTCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|1|1|2925341-2927019|CRISPRCasFinder
GTGTTTATCCCCGTTGGCGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGGTAACGTCTGGATTATTTTCTGAGGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGCTGCTGCTGATCAGTTTACCCGCTGGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGATCGATGGCAAAGTTACCGATCCCTATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATTCCGGAACCTGACCCGCAACTACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTCGCTGTTAATCTCCTCGTTAAGAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGACAGTTGCTCAGGTGGCTGCCGCCAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGACAAAATTAATATTGTTGGCTGGCGTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CGTAAATTTTGCTGTAATCAACTGTGCTGTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAGAGAATTGCCGCCAATAGAACAGCGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCGCAAAGGAAGCAGAGCTGTTCTGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGTCGTATATCCGTTACGCAACCCGCGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTTGCCAGTGGATTTTTGGTTATCTATGTAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAATGCAGCCCCTCTAAAATTGTTGCCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGGAGGAGAATTTGATGCAGGTGAAGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGGTGTTTAAGCCCGACGTCGGCAACAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAGTTCGGCAAGAAAAATGTGGTCCGGCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACTGATTATCTGCTAACACACGGCTCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAGTAAACCAATGCCATGCCAACATCGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTACAAATGGCACTCCATTTATTATTCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAGTTAGCGAGGTTTGACGCATCAACCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACGACGTTTGCCTGTGTCCCGATAGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCAGTCCGGGCGCGCAGTTTACGTCGTACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGACGACTGAAAAATGGCGGGGTAATAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|1|1|2925341-2927019|CRT
GTGTTTATCCCCGTTGGCGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGGTAACGTCTGGATTATTTTCTGAGGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGCTGCTGCTGATCAGTTTACCCGCTGGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGATCGATGGCAAAGTTACCGATCCCTATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATTCCGGAACCTGACCCGCAACTACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTCGCTGTTAATCTCCTCGTTAAGAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGACAGTTGCTCAGGTGGCTGCCGCCAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGACAAAATTAATATTGTTGGCTGGCGTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CGTAAATTTTGCTGTAATCAACTGTGCTGTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAGAGAATTGCCGCCAATAGAACAGCGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCGCAAAGGAAGCAGAGCTGTTCTGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGTCGTATATCCGTTACGCAACCCGCGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTTGCCAGTGGATTTTTGGTTATCTATGTAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAATGCAGCCCCTCTAAAATTGTTGCCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGGAGGAGAATTTGATGCAGGTGAAGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGGTGTTTAAGCCCGACGTCGGCAACAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAGTTCGGCAAGAAAAATGTGGTCCGGCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACTGATTATCTGCTAACACACGGCTCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAGTAAACCAATGCCATGCCAACATCGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTACAAATGGCACTCCATTTATTATTCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAGTTAGCGAGGTTTGACGCATCAACCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACGACGTTTGCCTGTGTCCCGATAGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCAGTCCGGGCGCGCAGTTTACGTCGTACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGACGACTGAAAAATGGCGGGGTAATAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|1|1|2925402-2927019|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGGATGGCTCATATCCGGTTTCTGTTTCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGGTAACGTCTGGATTATTTTCTGAGGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGCTGCTGCTGATCAGTTTACCCGCTGGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGCGAATAATCTCTAATAGTCTCAATTCGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGATCGATGGCAAAGTTACCGATCCCTATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATTCCGGAACCTGACCCGCAACTACAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGTCGCTGTTAATCTCCTCGTTAAGAAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGACAGTTGCTCAGGTGGCTGCCGCCAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGACAAAATTAATATTGTTGGCTGGCGTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CGTAAATTTTGCTGTAATCAACTGTGCTGTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAGAGAATTGCCGCCAATAGAACAGCGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCGCAAAGGAAGCAGAGCTGTTCTGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTGTCGTATATCCGTTACGCAACCCGCGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTTGCCAGTGGATTTTTGGTTATCTATGTAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAATGCAGCCCCTCTAAAATTGTTGCCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGGAGGAGAATTTGATGCAGGTGAAGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGTGGTGTTTAAGCCCGACGTCGGCAACAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGAGTTCGGCAAGAAAAATGTGGTCCGGCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACTGATTATCTGCTAACACACGGCTCTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACAGTAAACCAATGCCATGCCAACATCGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTACAAATGGCACTCCATTTATTATTCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAGTTAGCGAGGTTTGACGCATCAACCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCACGACGTTTGCCTGTGTCCCGATAGCCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCAGTCCGGGCGCGCAGTTTACGTCGTACCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGACGACTGAAAAATGGCGGGGTAATAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012514.1\|WP_000039870.1\|2937060_2937795_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012514.1\|WP_017466175.1\|2927408_2928329_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP012514.1\|WP_000134246.1\|2917949_2918999_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP012514.1\|WP_000517480.1\|2920203_2920515_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP012514.1\|WP_024143962.1\|2936019_2936973_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012514.1\|WP_001221537.1\|2917207_2917969_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP012514.1\|WP_000281486.1\|2928325_2928976_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP012514.1\|WP_000372384.1\|2923120_2924029_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP012514.1\|WP_072100738.1\|2920705_2921062_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP012514.1\|WP_053444844.1\|2924279_2925326_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP012514.1\|WP_000206416.1\|2929714_2930773_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP012514.1\|WP_000117946.1\|2930786_2931347_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012514.1\|WP_017466176.1\|2928957_2929704_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP012514.1\|WP_000029738.1\|2932911_2935575_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012514.1\|WP_001173663.1\|2921079_2921685_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP012514.1\|WP_000368584.1\|2931343_2932900_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012514.1\|WP_000741649.1\|2919474_2920185_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP012514.1\|WP_001518648.1\|2927115_2927409_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP012514.1\|WP_001522893.1\|2921671_2923111_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP012514.1\|WP_001219245.1\|2918995_2919475_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP012514.1\|WP_000039870.1\|2937060_2937795_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP012514.1\|WP_017466175.1\|2927408_2928329_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.05302e-156
NZ_CP012514.1\|WP_000134246.1\|2917949_2918999_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP012514.1\|WP_000517480.1\|2920203_2920515_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP012514.1\|WP_024143962.1\|2936019_2936973_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012514.1\|WP_001221537.1\|2917207_2917969_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP012514.1\|WP_000281486.1\|2928325_2928976_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP012514.1\|WP_000372384.1\|2923120_2924029_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP012514.1\|WP_072100738.1\|2920705_2921062_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	9.82285e-49
NZ_CP012514.1\|WP_053444844.1\|2924279_2925326_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP012514.1\|WP_000206416.1\|2929714_2930773_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.35073e-131
NZ_CP012514.1\|WP_000117946.1\|2930786_2931347_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP012514.1\|WP_017466176.1\|2928957_2929704_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.2413e-48
NZ_CP012514.1\|WP_000029738.1\|2932911_2935575_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012514.1\|WP_001173663.1\|2921079_2921685_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP012514.1\|WP_000368584.1\|2931343_2932900_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP012514.1\|WP_000741649.1\|2919474_2920185_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP012514.1\|WP_001518648.1\|2927115_2927409_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP012514.1\|WP_001522893.1\|2921671_2923111_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP012514.1\|WP_001219245.1\|2918995_2919475_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104

>NZ_CP012514.1|WP_053444844.1|2924279_2925326_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPRPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP012514.1|WP_000372384.1|2923120_2924029_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP012514.1|WP_001522893.1|2921671_2923111_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFNGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP012514.1|WP_001173663.1|2921079_2921685_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP012514.1|WP_072100738.1|2920705_2921062_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIVLHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP012514.1|WP_000517480.1|2920203_2920515_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP012514.1|WP_000741649.1|2919474_2920185_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP012514.1|WP_001219245.1|2918995_2919475_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP012514.1|WP_000134246.1|2917949_2918999_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP012514.1|WP_001221537.1|2917207_2917969_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP012514.1|WP_001518648.1|2927115_2927409_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP012514.1|WP_017466175.1|2927408_2928329_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEMGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPESESLGDSGHRGHG
>NZ_CP012514.1|WP_000281486.1|2928325_2928976_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP012514.1|WP_017466176.1|2928957_2929704_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP012514.1|WP_000206416.1|2929714_2930773_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP012514.1|WP_000117946.1|2930786_2931347_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP012514.1|WP_000368584.1|2931343_2932900_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP012514.1|WP_000029738.1|2932911_2935575_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP012514.1|WP_024143962.1|2936019_2936973_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWNKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012514.1|WP_000039870.1|2937060_2937795_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP012514_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012514_2

2943189-2944315

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

18 spacers

cas3,cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NZ_CP012514_2

>merge|NZ_CP012514|2|2943189-2944315|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACTAACTCATCACATCCGCGTCAGACCTCGTGACCGGTTTATCCCCGCTGGCGCGGGGAACACGACAACGCATCAAGACCGATATACACCACGCCCGGTTTATCCCCGCTGGCGCGGGGAACACCCGGACAACAGTGACACCTGTAAATTCTGCGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTCTACCCTATCTAACCCATTAGAATAAAAGGACGGTTTATCCCCGCTGGCGCGGGGAACACTTCTCGGCGCGGCGCAATATCCCGGCGCACGCCGGTTTATCCCCGCTGGCGCGGGGAACACCGCACCACTATGATTCGAATAGATCGTAGCGGCGGTTTATCCCCGCTGGCGCGGGAAACACAGTGCCATCATCCCACTCGCAAAGATTCAGCACGGTTTATCCCCGCTGGCGCGGGGAACACGGATATCTCTAATAAAGGTCATCTTCGTTTCCCGGTTTATCCCCGCTGGCGCGGGGAACACGTCTATAGTTCCCCGCATACTATCACCGCGGACGGTTTATCCCCGCTGGCGCGGGGAACACTAGTCGATCGGTCTGGAGCAGATAAACCGGCACGGTTTATCCCCGCTGGCGCGGGGAACACTTTGTCCAGTTCGGCGATGCGGCGTTCTGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCGGGGAAGTATCAACCAGCAGATAACGGTCGGTTTATCCCCGCTGGCGCGGGGAACACTGCGAAATAGTCACGTGAGCAACGCCGACAAGCGGTTTATCCCCGCTGGCGCGGGGAACACTTACGTACTCCGGGGAAGTCGTTAGAGAGCTGCGGTTTATCCCCGCTGGCGCGGGGAACACAACTCTGACCATTGAAACGCGTGTATCCAGCACGGTTTATCCCCGCTGGCGCGGGGAACACGAATTTGTAATCTGGACTCCCATGCGTTATCACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|2|2|2943189-2944315|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	TAACTCATCACATCCGCGTCAGACCTCGTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACAACGCATCAAGACCGATATACACCACGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGACAACAGTGACACCTGTAAATTCTGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAAACTCAGTGGCAGCGGCGGTGCAGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAAACTCAGTGGCAGCGGCGGTGCAGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTACCCTATCTAACCCATTAGAATAAAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTCGGCGCGGCGCAATATCCCGGCGCACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCACCACTATGATTCGAATAGATCGTAGCGG
CGGTTTATCCCCGCTGGCGCGGGAAACAC	AGTGCCATCATCCCACTCGCAAAGATTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATATCTCTAATAAAGGTCATCTTCGTTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTATAGTTCCCCGCATACTATCACCGCGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGTCGATCGGTCTGGAGCAGATAAACCGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTCCAGTTCGGCGATGCGGCGTTCTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCGGGGAAGTATCAACCAGCAGATAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGAAATAGTCACGTGAGCAACGCCGACAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACGTACTCCGGGGAAGTCGTTAGAGAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTCTGACCATTGAAACGCGTGTATCCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATTTGTAATCTGGACTCCCATGCGTTATCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|2|2|2943189-2944315|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	TAACTCATCACATCCGCGTCAGACCTCGTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACAACGCATCAAGACCGATATACACCACGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGACAACAGTGACACCTGTAAATTCTGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAAACTCAGTGGCAGCGGCGGTGCAGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCAAACTCAGTGGCAGCGGCGGTGCAGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTACCCTATCTAACCCATTAGAATAAAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTCGGCGCGGCGCAATATCCCGGCGCACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCACCACTATGATTCGAATAGATCGTAGCGG
CGGTTTATCCCCGCTGGCGCGGGAAACAC	AGTGCCATCATCCCACTCGCAAAGATTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATATCTCTAATAAAGGTCATCTTCGTTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTATAGTTCCCCGCATACTATCACCGCGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGTCGATCGGTCTGGAGCAGATAAACCGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTCCAGTTCGGCGATGCGGCGTTCTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCGGGGAAGTATCAACCAGCAGATAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGAAATAGTCACGTGAGCAACGCCGACAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACGTACTCCGGGGAAGTCGTTAGAGAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTCTGACCATTGAAACGCGTGTATCCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATTTGTAATCTGGACTCCCATGCGTTATCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP012514|2|2|2943249-2943400|PILER-CR
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	GACAACGCATCAAGACCGATATACACCACGC
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGACAACAGTGACACCTGTAAATTCTGCG
CCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTCTACCCTATCTAACCCATTAGAATAAAAGGACGGTTTATCCCCGCTGGCGCGGGGAACACTTCTCGGCGCGGCGCAATATCCCGGCGCACGCCGGTTTATCCCCGCTGGCGCGGGGAACACCGCACCACTATGATTCGAATAGATCGTAGCGGCGGTTTATCCCCGCTGGCGCGGGAAACAC	AGTGCCATCATCCCACTCGCAAAGATTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATATCTCTAATAAAGGTCATCTTCGTTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTATAGTTCCCCGCATACTATCACCGCGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGTCGATCGGTCTGGAGCAGATAAACCGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTCCAGTTCGGCGATGCGGCGTTCTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCGGGGAAGTATCAACCAGCAGATAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGAAATAGTCACGTGAGCAACGCCGACAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACGTACTCCGGGGAAGTCGTTAGAGAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTCTGACCATTGAAACGCGTGTATCCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATTTGTAATCTGGACTCCCATGCGTTATCA


>NZ_CP012514|2|3|2943677-2944315|PILER-CR
	GACAACGCATCAAGACCGATATACACCACGC
CCGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGACAACAGTGACACCTGTAAATTCTGCG
CCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGCAAACTCAGTGGCAGCGGCGGTGCAGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTCTACCCTATCTAACCCATTAGAATAAAAGGACGGTTTATCCCCGCTGGCGCGGGGAACACTTCTCGGCGCGGCGCAATATCCCGGCGCACGCCGGTTTATCCCCGCTGGCGCGGGGAACACCGCACCACTATGATTCGAATAGATCGTAGCGGCGGTTTATCCCCGCTGGCGCGGGAAACAC	AGTGCCATCATCCCACTCGCAAAGATTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATATCTCTAATAAAGGTCATCTTCGTTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTATAGTTCCCCGCATACTATCACCGCGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGTCGATCGGTCTGGAGCAGATAAACCGGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTCCAGTTCGGCGATGCGGCGTTCTGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCGGGGAAGTATCAACCAGCAGATAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGAAATAGTCACGTGAGCAACGCCGACAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACGTACTCCGGGGAAGTCGTTAGAGAGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTCTGACCATTGAAACGCGTGTATCCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATTTGTAATCTGGACTCCCATGCGTTATCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012514.1\|WP_017466163.1\|2939608_2941408_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP012514.1\|WP_000036734.1\|2945418_2946717_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP012514.1\|WP_000210449.1\|2948664_2949465_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP012514.1\|WP_000039870.1\|2937060_2937795_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012514.1\|WP_024143962.1\|2936019_2936973_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012514.1\|WP_001290662.1\|2937896_2939609_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP012514.1\|WP_000178258.1\|2954242_2954749_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP012514.1\|WP_017466195.1\|2955230_2955767_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP012514.1\|WP_001199961.1\|2944611_2945283_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP012514.1\|WP_000117946.1\|2930786_2931347_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012514.1\|WP_017466162.1\|2950070_2950658_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP012514.1\|WP_000206416.1\|2929714_2930773_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP012514.1\|WP_017466176.1\|2928957_2929704_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP012514.1\|WP_077908752.1\|2950737_2953437_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP012514.1\|WP_000368584.1\|2931343_2932900_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012514.1\|WP_017466196.1\|2953449_2954223_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP012514.1\|WP_000210863.1\|2946799_2948437_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP012514.1\|WP_000029738.1\|2932911_2935575_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012514.1\|WP_000832396.1\|2954763_2955234_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP012514.1\|WP_000108313.1\|2941842_2942205_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264

Protein	Function_ID	Function_description	E-value
NZ_CP012514.1\|WP_017466163.1\|2939608_2941408_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP012514.1\|WP_000036734.1\|2945418_2946717_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP012514.1\|WP_000210449.1\|2948664_2949465_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP012514.1\|WP_000039870.1\|2937060_2937795_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP012514.1\|WP_024143962.1\|2936019_2936973_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012514.1\|WP_001290662.1\|2937896_2939609_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP012514.1\|WP_000178258.1\|2954242_2954749_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.6337e-105
NZ_CP012514.1\|WP_017466195.1\|2955230_2955767_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	2.30226e-121
NZ_CP012514.1\|WP_001199961.1\|2944611_2945283_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP012514.1\|WP_000117946.1\|2930786_2931347_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP012514.1\|WP_017466162.1\|2950070_2950658_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.39196e-99
NZ_CP012514.1\|WP_000206416.1\|2929714_2930773_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.35073e-131
NZ_CP012514.1\|WP_017466176.1\|2928957_2929704_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.2413e-48
NZ_CP012514.1\|WP_077908752.1\|2950737_2953437_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP012514.1\|WP_000368584.1\|2931343_2932900_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP012514.1\|WP_017466196.1\|2953449_2954223_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP012514.1\|WP_000210863.1\|2946799_2948437_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP012514.1\|WP_000029738.1\|2932911_2935575_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012514.1\|WP_000832396.1\|2954763_2955234_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP012514.1\|WP_000108313.1\|2941842_2942205_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58

>NZ_CP012514.1|WP_000108313.1|2941842_2942205_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP012514.1|WP_017466163.1|2939608_2941408_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQATASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQNITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP012514.1|WP_001290662.1|2937896_2939609_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP012514.1|WP_000039870.1|2937060_2937795_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP012514.1|WP_024143962.1|2936019_2936973_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWNKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012514.1|WP_000029738.1|2932911_2935575_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP012514.1|WP_000368584.1|2931343_2932900_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP012514.1|WP_000117946.1|2930786_2931347_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP012514.1|WP_000206416.1|2929714_2930773_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP012514.1|WP_017466176.1|2928957_2929704_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP012514.1|WP_001199961.1|2944611_2945283_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP012514.1|WP_000036734.1|2945418_2946717_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP012514.1|WP_000210863.1|2946799_2948437_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP012514.1|WP_000210449.1|2948664_2949465_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP012514.1|WP_017466162.1|2950070_2950658_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAISDAGKNNIKLGDTYTQAFADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP012514.1|WP_077908752.1|2950737_2953437_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP012514.1|WP_017466196.1|2953449_2954223_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTAPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP012514.1|WP_000178258.1|2954242_2954749_+|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP012514.1|WP_000832396.1|2954763_2955234_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP012514.1|WP_017466195.1|2955230_2955767_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFKGSATVSFEYQ

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Crispr_ID: NZ_CP012514_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012514_3

3806417-3806519

Unclear

Consensus_repeat	Method
ATTATTCCCGATCCGGTGGACCCTG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP012514_3

>merge|NZ_CP012514|3|3806417-3806519|CRISPRCasFinder
ATTATTCCCGATCCGGTGGACCCTGTTATTCCCGATCCGGTAGACCCTGATCCAGTAGACCCGGTTATCCCTGACCCTATTATTCCCGATCCGGTGGACCCTG

>NZ_CP012514|3|3|3806417-3806519|CRISPRCasFinder
ATTATTCCCGATCCGGTGGACCCTG	TTATTCCCGATCCGGTAGACCCTGATCCAGTAGACCCGGTTATCCCTGACCCT
ATTATTCCCGATCCGGTGGACCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012514.1\|WP_000749540.1\|3816585_3817527_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP012514.1\|WP_001082117.1\|3811379_3811472_-\|protein-MgtR	unknown	unknown	unknown
NZ_CP012514.1\|WP_000135058.1\|3788339_3788615_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|188073
NZ_CP012514.1\|WP_017466070.1\|3796506_3798216_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|282957
NZ_CP012514.1\|WP_001521985.1\|3807674_3808139_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012514.1\|WP_017465918.1\|3804035_3804653_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225360
NZ_CP012514.1\|WP_000280481.1\|3788633_3790745_+\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236843
NZ_CP012514.1\|WP_001541135.1\|3809059_3809173_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012514.1\|WP_000392694.1\|3814439_3815135_-\|MgtC-family-protein	unknown	unknown	gnl\|CDD\|185283
NZ_CP012514.1\|WP_017466071.1\|3791444_3793526_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP012514.1\|WP_001065324.1\|3810699_3811179_-\|membrane-protein	unknown	unknown	unknown
NZ_CP012514.1\|WP_000106461.1\|3809790_3810471_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_CP012514.1\|WP_017466068.1\|3800648_3802031_-\|glycoside-pentoside-hexuronide-family-transporter	unknown	unknown	gnl\|CDD\|183145
NZ_CP012514.1\|WP_000535970.1\|3815640_3816543_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP012514.1\|WP_000115428.1\|3794994_3796386_+\|xanthine/proton-symporter-XanP	unknown	unknown	gnl\|CDD\|273276
NZ_CP012514.1\|WP_001068436.1\|3790749_3791439_+\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	unknown	unknown	gnl\|CDD\|236837
NZ_CP012514.1\|WP_000462250.1\|3793561_3794767_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP012514.1\|WP_017466069.1\|3798318_3800637_-\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731
NZ_CP012514.1\|WP_000131288.1\|3811493_3814220_-\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|237914
NZ_CP012514.1\|WP_001278062.1\|3808149_3809007_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226233

Protein	Function_ID	Function_description	E-value
NZ_CP012514.1\|WP_000135058.1\|3788339_3788615_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|188073	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit. This small component of highly purified E. coli RNA polymerase is not required for transcription, but acts in assembly and is present in stochiometric amounts. The trusted cutoff excludes archaeal homologs but captures some organellar sequences. [Transcription, DNA-dependent RNA polymerase].	4.81124e-23
NZ_CP012514.1\|WP_017466070.1\|3796506_3798216_+\|AsmA-family-protein	gnl\|CDD\|282957	pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.	9.11295e-22
NZ_CP012514.1\|WP_000535970.1\|3815640_3816543_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.62239e-50
NZ_CP012514.1\|WP_017465918.1\|3804035_3804653_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225360	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription].	0.00142104
NZ_CP012514.1\|WP_000280481.1\|3788633_3790745_+\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	gnl\|CDD\|236843	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase.	0
NZ_CP012514.1\|WP_000749540.1\|3816585_3817527_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.67877e-146
NZ_CP012514.1\|WP_000392694.1\|3814439_3815135_-\|MgtC-family-protein	gnl\|CDD\|185283	PRK15385, PRK15385, MgtC family protein.	6.81515e-155
NZ_CP012514.1\|WP_017466071.1\|3791444_3793526_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP012514.1\|WP_000106461.1\|3809790_3810471_+\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.05871e-58
NZ_CP012514.1\|WP_017466068.1\|3800648_3802031_-\|glycoside-pentoside-hexuronide-family-transporter	gnl\|CDD\|183145	PRK11462, PRK11462, putative transporter; Provisional.	0
NZ_CP012514.1\|WP_000115428.1\|3794994_3796386_+\|xanthine/proton-symporter-XanP	gnl\|CDD\|273276	TIGR00801, Uric_acid_permease, uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39). [Transport and binding proteins, Nucleosides, purines and pyrimidines].	2.19228e-145
NZ_CP012514.1\|WP_001068436.1\|3790749_3791439_+\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	gnl\|CDD\|236837	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional.	2.80076e-177
NZ_CP012514.1\|WP_000462250.1\|3793561_3794767_-\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP012514.1\|WP_017466069.1\|3798318_3800637_-\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0
NZ_CP012514.1\|WP_000131288.1\|3811493_3814220_-\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|237914	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional.	0
NZ_CP012514.1\|WP_001278062.1\|3808149_3809007_-\|transcriptional-regulator	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	6.25098e-40

>NZ_CP012514.1|WP_017465918.1|3804035_3804653_+|helix-turn-helix-transcriptional-regulator
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSNGFIFVDFSFPNLRRFTDLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL
>NZ_CP012514.1|WP_017466068.1|3800648_3802031_-|glycoside-pentoside-hexuronide-family-transporter
MKSEILSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLLARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSLNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVKLIGGENKALGFQGGIAALSVVAFLMLAFCFFTTKERVEAPATHTSMREDLRDIWHNDQWRIVGLLTILNILAVCVRGGAMMYYVTWILGKPGVFVAFLTTYCVGNLIGSALAKPLTDWKCKVSVFWWTNALLAVISVAMFFVPMHATIAMFIFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLALGGALIGWMLAGGGYDAAAKTQNSATISIIIALFTIVPAICYLLSAAIAKRYYTLKSPFLKTILEQLAQGAHRNEQEFTHKELQN
>NZ_CP012514.1|WP_017466069.1|3798318_3800637_-|alpha-xylosidase
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMQNNAEFAELKSGSLSVRVTKGELWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYFVIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYADKLKGLVEMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTGSTITVSGEGEARNWTLCLRNITQISGTKCGSYAESELGVVITPQGNEVVITL
>NZ_CP012514.1|WP_017466070.1|3796506_3798216_+|AsmA-family-protein
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSEFFAPLTTVPSLQIGRLEVTDSSLQGPGWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLREGKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPAFPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQLPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGGEVTSTEPAL
>NZ_CP012514.1|WP_000115428.1|3794994_3796386_+|xanthine/proton-symporter-XanP
MSVNAIEPADAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRILHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLAIIILLNRQRNPYLRVASLVIAMAAGYLLAWFMGMLPENNAPVSQDILMVPTPLYYGLGIDWNLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPQILQFAPEWVKNLLSSGIAAGGITAIVLNLILPPEKP
>NZ_CP012514.1|WP_000462250.1|3793561_3794767_-|sodium/glutamate-symporter
MFELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLLVAVALLVLKKSVGWEVNFDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLVVVVGLLLMQNAIGIGMASLLGLDPLMGLIAGSITLSGGHGTGAAWSKLFVERYGFANATEVAMACATFGLVLGGLIGGPVARYLVKHSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAGTVLELPVFVCVLFVGVILSNGLALVGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAQ
>NZ_CP012514.1|WP_017466071.1|3791444_3793526_+|ATP-dependent-DNA-helicase-RecG
MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRAGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQILRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEIQRIARHIHERYPQQAQALIERWMPETERYSNA
>NZ_CP012514.1|WP_001068436.1|3790749_3791439_+|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH
MNPKRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFEGGYPVLAKVAKRKGLPYPRVNQQGEIDADADWWATMQAAG
>NZ_CP012514.1|WP_000280481.1|3788633_3790745_+|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLAEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGEAVVPTVAQSNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETEQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSTFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN
>NZ_CP012514.1|WP_000135058.1|3788339_3788615_+|DNA-directed-RNA-polymerase-subunit-omega
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR
>NZ_CP012514.1|WP_001521985.1|3807674_3808139_-|hypothetical-protein
MLACLTLLFLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH
>NZ_CP012514.1|WP_001278062.1|3808149_3809007_-|transcriptional-regulator
MSCYAATASDYTQWCLLTLSNYVMFWHGNNAMLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGVSLMTIRKDFAQAIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGDTGCVTLFFRGVTHG
>NZ_CP012514.1|WP_001541135.1|3809059_3809173_-|hypothetical-protein
MIFSPQYKTGDLTNKKTKRTFTPESAIMRKAVSTLTC
>NZ_CP012514.1|WP_000106461.1|3809790_3810471_+|isochorismatase-family-protein
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
>NZ_CP012514.1|WP_001065324.1|3810699_3811179_-|membrane-protein
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
>NZ_CP012514.1|WP_001082117.1|3811379_3811472_-|protein-MgtR
MNRSPDKIIALIFLLISLLVLCLALWQIVF
>NZ_CP012514.1|WP_000131288.1|3811493_3814220_-|magnesium-translocating-P-type-ATPase
MTDMNIENRKLNRPASENDKQHKKVFPIEAEAFHSPEETLARLNSHRQGLTIEEASERLKVYGRNEVAHEQVPPALIQLLQAFNNPFIYVLMALAGVSFITDYWLPLRRGEETDLTGVLIILTMVSLSGLLRFWQEFRTNRAAQALKKMVRTTATVLRRGPGNIGAVQEEIPIEELVPGDVVFLAAGDLVPADVRLLASRDLFISQSILSGESLPVEKYDVMADVAGKDSEQLPDKDKSLLDLGNICLMGTNVTSGRAQAVVVATGSRTWFGSLAKSIVGTRTQTAFDRGVNSVSWLLIRFMLIMVPVVLLINGFSKGDWVEASLFALAVAVGLTPEMLPMIVSSNLAKGAIAMSRRKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLEHHLDVSGVKSSRVLMLAWLNSSSQSGARNVMDRAILRFGEGRIAPSTKARFIKRDELPFDFVRRRVSVLVEDAQHGDRCLICKGAVEEMMMVATHLREGDRVVALTETRRELLLAKTEDYNAQGFRVLLIATRKLDGSGNNPTLSVEDETELTIEGMLTFLDPPKESAGKAIAALRDNGVAVKVLTGDNPVVTARICLEVGIDTHDILTGTQVEAMSDAELASEVEKRAVFARLTPLQKTRILQALQKNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIILLEKDLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLIQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWYVFAANNVEAQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPLSYFPWLVATLLSYCLVAQGMKRFYIKRFGQWF
>NZ_CP012514.1|WP_000392694.1|3814439_3815135_-|MgtC-family-protein
MEERMLMFPYILNLLAAMLLGALIGAERQWRQRMAGLRTNALVATGAAVFILSSMTTSPDSPGRIAAQIVSGIGFLGAGVIMREGMNVRGLNTAATLWCSAGIGVLCGLGQFKNALAATIIILCANILLREAAQRINQLPISAEGEKRYILKVTCNKEDESAVRQWLLNIVKEAAICLQGLGSVPAQEQGYKEIRAELVGHADYRKTRELIISRIGDNDNITAIHWSIDSQ
>NZ_CP012514.1|WP_000535970.1|3815640_3816543_+|EamA-family-transporter
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA
>NZ_CP012514.1|WP_000749540.1|3816585_3817527_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDITVVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQHKERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIEREMVLMITGLSDEEIKAKRH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012514_1	1.24\|2926776\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926776-2926807	32	NZ_KU963390	Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence	11380-11411	0	1.0
NZ_CP012514_1	1.24\|2926776\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926776-2926807	32	NZ_KU963390	Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence	51216-51247	0	1.0
NZ_CP012514_1	1.24\|2926776\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926776-2926807	32	NZ_CP010193	Escherichia coli strain M8 plasmid B, complete genome	13579-13610	0	1.0
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP010173	Escherichia coli strain H8 plasmid A, complete sequence	43964-43995	2	0.938
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	74371-74402	2	0.938
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP046005	Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence	16994-17025	2	0.938
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	MG592476	Vibrio phage 1.104.O._10N.286.49.A12, partial genome	53386-53417	2	0.938
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	MG592538	Vibrio phage 1.171.O._10N.261.52.F12, partial genome	52140-52171	2	0.938
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	MG592428	Vibrio phage 1.046.O._10N.286.52.E3, partial genome	57590-57621	2	0.938
NZ_CP012514_1	1.22\|2926654\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926654-2926685	32	NZ_CP041251	Raoultella electrica strain DSM 102253 plasmid unnamed4, complete sequence	4814-4845	4	0.875
NZ_CP012514_1	1.24\|2926776\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926776-2926807	32	NC_011148	Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence	16491-16522	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	29797-29828	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP021537	Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence	42949-42980	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	78817-78848	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	28593-28624	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	9058-9089	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	12322-12353	4	0.875
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP040893	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence	56847-56878	4	0.875
NZ_CP012514_1	1.2\|2925431\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925431-2925462	32	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	1984-2015	5	0.844
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	NC_021559	Prochlorococcus phage P-SSM3 genomic sequence	102367-102398	5	0.844
NZ_CP012514_1	1.2\|2925431\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925431-2925462	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	328890-328921	6	0.812
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	MN694803	Marine virus AFVG_250M814, complete genome	36099-36130	6	0.812
NZ_CP012514_1	1.24\|2926776\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926776-2926807	32	NC_017903	Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence	7494-7525	6	0.812
NZ_CP012514_1	1.10\|2925920\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925920-2925951	32	MH651182	Gordonia phage Neville, complete genome	14047-14078	7	0.781
NZ_CP012514_2	2.2\|2943279\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943279-2943310	32	MF495478	Aeromonas salmonicida plasmid pS121-1b, complete sequence	117450-117481	7	0.781
NZ_CP012514_2	2.2\|2943279\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943279-2943310	32	NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	31198-31229	7	0.781
NZ_CP012514_2	2.2\|2943279\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943279-2943310	32	NZ_CP022170	Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence	125043-125074	7	0.781
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	198251-198282	7	0.781
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	46733-46764	7	0.781
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	6403-6434	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	478474-478505	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	716796-716827	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	633092-633123	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	493788-493819	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	716796-716827	7	0.781
NZ_CP012514_2	2.12\|2943889\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943889-2943920	32	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	443317-443348	7	0.781
NZ_CP012514_2	2.13\|2943950\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943950-2943981	32	KX657793	Mycobacterium phage DarthPhader, complete genome	27141-27172	7	0.781
NZ_CP012514_2	2.19\|2943279\|31\|NZ_CP012514\|PILER-CR	2943279-2943309	31	MF495478	Aeromonas salmonicida plasmid pS121-1b, complete sequence	117451-117481	7	0.774
NZ_CP012514_2	2.19\|2943279\|31\|NZ_CP012514\|PILER-CR	2943279-2943309	31	NZ_CP022170	Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence	125044-125074	7	0.774
NZ_CP012514_2	2.19\|2943279\|31\|NZ_CP012514\|PILER-CR	2943279-2943309	31	NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	31198-31228	7	0.774
NZ_CP012514_1	1.11\|2925981\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925981-2926012	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	290305-290336	8	0.75
NZ_CP012514_1	1.13\|2926103\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926103-2926134	32	NZ_CP049029	Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence	198521-198552	8	0.75
NZ_CP012514_1	1.23\|2926715\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926715-2926746	32	NZ_CP024786	Nostoc flagelliforme CCNUN1 plasmid pNFSY01, complete sequence	14571-14602	8	0.75
NZ_CP012514_1	1.23\|2926715\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926715-2926746	32	NZ_CP026687	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM5, complete sequence	3635-3666	8	0.75
NZ_CP012514_2	2.1\|2943218\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943218-2943249	32	JX434031	Pseudomonas phage JBD24, complete genome	2242-2273	8	0.75
NZ_CP012514_2	2.2\|2943279\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943279-2943310	32	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	11553-11584	8	0.75
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	227163-227194	8	0.75
NZ_CP012514_2	2.4\|2943401\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943401-2943432	32	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	48479-48510	8	0.75
NZ_CP012514_2	2.5\|2943462\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943462-2943493	32	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	48479-48510	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448563	Streptococcus satellite phage Javan601, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448565	Streptococcus satellite phage Javan603, complete genome	3286-3317	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448571	Streptococcus satellite phage Javan609, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448575	Streptococcus satellite phage Javan612, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448567	Streptococcus satellite phage Javan605, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448574	Streptococcus satellite phage Javan611, complete genome	2668-2699	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448578	Streptococcus satellite phage Javan615, complete genome	2609-2640	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448577	Streptococcus satellite phage Javan614, complete genome	2586-2617	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448573	Streptococcus satellite phage Javan610, complete genome	3036-3067	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448568	Streptococcus satellite phage Javan606, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448570	Streptococcus satellite phage Javan608, complete genome	3036-3067	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448564	Streptococcus satellite phage Javan602, complete genome	3286-3317	8	0.75
NZ_CP012514_2	2.6\|2943523\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943523-2943554	32	MK448566	Streptococcus satellite phage Javan604, complete genome	3004-3035	8	0.75
NZ_CP012514_2	2.14\|2944011\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2944011-2944042	32	MN693945	Marine virus AFVG_250M952, complete genome	30837-30868	8	0.75
NZ_CP012514_2	2.14\|2944011\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2944011-2944042	32	MT773554	Myoviridae sp. isolate BML_2 genomic sequence	32798-32829	8	0.75
NZ_CP012514_2	2.19\|2943279\|31\|NZ_CP012514\|PILER-CR	2943279-2943309	31	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	11554-11584	8	0.742
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	227164-227194	8	0.742
NZ_CP012514_1	1.2\|2925431\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925431-2925462	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1929932-1929963	9	0.719
NZ_CP012514_1	1.2\|2925431\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925431-2925462	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1709399-1709430	9	0.719
NZ_CP012514_1	1.11\|2925981\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2925981-2926012	32	NZ_CP017833	Butyrivibrio hungatei strain MB2003 plasmid pNP6, complete sequence	3577-3608	9	0.719
NZ_CP012514_1	1.15\|2926225\|33\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926225-2926257	33	NC_014825	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence	201147-201179	9	0.727
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	MN693670	Marine virus AFVG_250M508, complete genome	3528-3559	9	0.719
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	MN693662	Marine virus AFVG_250M383, complete genome	3578-3609	9	0.719
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	MN694314	Marine virus AFVG_250M513, complete genome	34322-34353	9	0.719
NZ_CP012514_1	1.23\|2926715\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926715-2926746	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	64408-64439	9	0.719
NZ_CP012514_1	1.23\|2926715\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926715-2926746	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	88752-88783	9	0.719
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	1162182-1162213	9	0.719
NZ_CP012514_2	2.9\|2943706\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943706-2943737	32	MN694334	Marine virus AFVG_250M1054, complete genome	5152-5183	9	0.719
NZ_CP012514_2	2.13\|2943950\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943950-2943981	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	1179902-1179933	9	0.719
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349325	Cyanophage S-RIM12 isolate W1_24_0910, complete genome	14479-14509	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349322	Cyanophage S-RIM12 isolate Sn_31_0910, complete genome	14482-14512	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349320	Cyanophage S-RIM12 isolate RW_29_1109, complete genome	14620-14650	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349310	Cyanophage S-RIM12 isolate RW_01_0310, complete genome	14375-14405	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349321	Cyanophage S-RIM12 isolate Sn_07_0910, complete genome	14375-14405	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349324	Cyanophage S-RIM12 isolate W1_12_0610, complete genome	14572-14602	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349314	Cyanophage S-RIM12 isolate RW_07_1112, complete genome	14620-14650	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349316	Cyanophage S-RIM12 isolate RW_22_0110, complete genome	14620-14650	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KJ019063	Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome	164295-164325	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KJ019027	Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome	166604-166634	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349315	Cyanophage S-RIM12 isolate RW_14_0101, complete genome	14626-14656	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349317	Cyanophage S-RIM12 isolate RW_25_0210, complete genome	14626-14656	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	NC_019444	Synechococcus phage S-MbCM6, complete genome	166613-166643	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KJ019128	Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome	166710-166740	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	NC_015285	Prochlorococcus phage Syn33, complete genome	14619-14649	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349309	Cyanophage S-RIM12 isolate Np_22_1112, complete genome	14614-14644	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349319	Cyanophage S-RIM12 isolate RW_28_1109, complete genome	14605-14635	9	0.71
NZ_CP012514_2	2.20\|2943340\|31\|NZ_CP012514\|PILER-CR	2943340-2943370	31	KX349318	Cyanophage S-RIM12 isolate RW_27_0310, complete genome	14686-14716	9	0.71
NZ_CP012514_1	1.18\|2926410\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2926410-2926441	32	MN694051	Marine virus AFVG_250M33, complete genome	34372-34403	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349325	Cyanophage S-RIM12 isolate W1_24_0910, complete genome	14478-14509	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349322	Cyanophage S-RIM12 isolate Sn_31_0910, complete genome	14481-14512	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349320	Cyanophage S-RIM12 isolate RW_29_1109, complete genome	14619-14650	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349310	Cyanophage S-RIM12 isolate RW_01_0310, complete genome	14374-14405	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349321	Cyanophage S-RIM12 isolate Sn_07_0910, complete genome	14374-14405	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349324	Cyanophage S-RIM12 isolate W1_12_0610, complete genome	14571-14602	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349314	Cyanophage S-RIM12 isolate RW_07_1112, complete genome	14619-14650	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349316	Cyanophage S-RIM12 isolate RW_22_0110, complete genome	14619-14650	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KJ019063	Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome	164294-164325	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KJ019027	Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome	166603-166634	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349315	Cyanophage S-RIM12 isolate RW_14_0101, complete genome	14625-14656	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349317	Cyanophage S-RIM12 isolate RW_25_0210, complete genome	14625-14656	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	NC_019444	Synechococcus phage S-MbCM6, complete genome	166612-166643	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KJ019128	Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome	166709-166740	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	NC_015285	Prochlorococcus phage Syn33, complete genome	14618-14649	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349309	Cyanophage S-RIM12 isolate Np_22_1112, complete genome	14613-14644	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349319	Cyanophage S-RIM12 isolate RW_28_1109, complete genome	14604-14635	10	0.688
NZ_CP012514_2	2.3\|2943340\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943340-2943371	32	KX349318	Cyanophage S-RIM12 isolate RW_27_0310, complete genome	14685-14716	10	0.688
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP010682	Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence	38809-38840	10	0.688
NZ_CP012514_2	2.7\|2943584\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2943584-2943615	32	NZ_CP010644	Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence	38859-38890	10	0.688
NZ_CP012514_2	2.13\|2943950\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2943950-2943981	32	NZ_KU140623	Sinorhizobium sp. M14 plasmid pSinB, complete sequence	129526-129557	10	0.688
NZ_CP012514_2	2.15\|2944072\|32\|NZ_CP012514\|CRISPRCasFinder,CRT,PILER-CR	2944072-2944103	32	MN694012	Marine virus AFVG_250M887, complete genome	22169-22200	10	0.688
NZ_CP012514_1	1.1\|2925370\|32\|NZ_CP012514\|CRISPRCasFinder,CRT	2925370-2925401	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 1.24|2926776|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU963390 (Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence) position: , mismatch: 0, identity: 1.0

caaagttagcgaggtttgacgcatcaaccaaa	CRISPR spacer
caaagttagcgaggtttgacgcatcaaccaaa	Protospacer
********************************

2. spacer 1.24|2926776|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU963390 (Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence) position: , mismatch: 0, identity: 1.0

caaagttagcgaggtttgacgcatcaaccaaa	CRISPR spacer
caaagttagcgaggtttgacgcatcaaccaaa	Protospacer
********************************

3. spacer 1.24|2926776|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010193 (Escherichia coli strain M8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

caaagttagcgaggtttgacgcatcaaccaaa	CRISPR spacer
caaagttagcgaggtttgacgcatcaaccaaa	Protospacer
********************************

4. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttttcggctcggcgcaatatcccggcgcacgc	Protospacer
**.***** ***********************

5. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttttcggctcggcgcaatatcccggcgcacgc	Protospacer
**.***** ***********************

6. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttttcggctcggcgcaatatcccggcgcacgc	Protospacer
**.***** ***********************

7. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MG592476 (Vibrio phage 1.104.O._10N.286.49.A12, partial genome) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttctcggctcggcgcaatatccctgcgcacgc	Protospacer
******** ************** ********

8. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MG592538 (Vibrio phage 1.171.O._10N.261.52.F12, partial genome) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttctcggctcggcgcagtatcccggcgcacgc	Protospacer
******** *******.***************

9. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MG592428 (Vibrio phage 1.046.O._10N.286.52.E3, partial genome) position: , mismatch: 2, identity: 0.938

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttctcggctcggcgcaatatccctgcgcacgc	Protospacer
******** ************** ********

10. spacer 1.22|2926654|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041251 (Raoultella electrica strain DSM 102253 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.875

tacagtaaaccaatgccatgccaacatcgctc	CRISPR spacer
tacagtaaaccaatgccatacctacatcaccc	Protospacer
*******************.** *****.*.*

11. spacer 1.24|2926776|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_011148 (Salmonella enterica subsp. enterica serovar Agona str. SL483 plasmid, complete sequence) position: , mismatch: 4, identity: 0.875

caaagttagcgaggtttgacgcatcaaccaaa	CRISPR spacer
caaagttagcgaggtttgaagcatcaatcagg	Protospacer
******************* *******.**..

12. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcctctgctcggcgcaatatcccggcgcacgc	Protospacer
 .*** ** ***********************

13. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP021537 (Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcctctgctcggcgcaatatcccggcgcacgc	Protospacer
 .*** ** ***********************

14. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcctctgctcggcgcaatatcccggcgcacgc	Protospacer
 .*** ** ***********************

15. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcctctgctcggcgcaatatcccggcgcacgc	Protospacer
 .*** ** ***********************

16. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcctctgctcggcgcaatatcccggcgcacgc	Protospacer
 .*** ** ***********************

17. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttgactgcgcggcgtaatatcccggcgcacgc	Protospacer
**  * ********.*****************

18. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP040893 (Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence) position: , mismatch: 4, identity: 0.875

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
ttgactgcgcggcgtaatatcccggcgcacgc	Protospacer
**  * ********.*****************

19. spacer 1.2|2925431|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 5, identity: 0.844

atggat-ggctcatatccggtttctgtttctgc	CRISPR spacer
-tggatcagctcatagccggtttctgtctcttc	Protospacer
 ***** .******* ***********.*** *

20. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_021559 (Prochlorococcus phage P-SSM3 genomic sequence) position: , mismatch: 5, identity: 0.844

actggaggagaatttgatgcaggtga-agcgtc	CRISPR spacer
tctggagcagaatttgctgcaggtgatagtgt-	Protospacer
 ****** ******** ********* **.**

21. spacer 1.2|2925431|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 6, identity: 0.812

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
agggatgcctcatatccggtttctgttcgtca	Protospacer
* ***** *******************. *

22. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN694803 (Marine virus AFVG_250M814, complete genome) position: , mismatch: 6, identity: 0.812

--actggaggagaatttgatgcaggtgaagcgtc	CRISPR spacer
cgcctgga--agaatatgatgcaggtgaagggtt	Protospacer
   *****  ***** ************** **.

23. spacer 1.24|2926776|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_017903 (Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence) position: , mismatch: 6, identity: 0.812

caaagttagcgaggtttgacgcatcaaccaaa	CRISPR spacer
caaagttagcgaggttagaagcatcaataagg	Protospacer
**************** ** *******. *..

24. spacer 1.10|2925920|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MH651182 (Gordonia phage Neville, complete genome) position: , mismatch: 7, identity: 0.781

cccgacagttgctcaggtggctgccgccaagg	CRISPR spacer
cttgacagttgctcaggtgactgccgagattg	Protospacer
*..****************.******  *  *

25. spacer 2.2|2943279|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MF495478 (Aeromonas salmonicida plasmid pS121-1b, complete sequence) position: , mismatch: 7, identity: 0.781

gacaacgcatcaagaccgatatacaccacgcc	CRISPR spacer
gtcatggcatccagaccgatatagaccactgc	Protospacer
* **  ***** *********** *****  *

26. spacer 2.2|2943279|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP038450 (Aeromonas media strain R50-22 plasmid pAeme6, complete sequence) position: , mismatch: 7, identity: 0.781

gacaacgcatcaagaccgatatacaccacgcc	CRISPR spacer
gtcatggcatccagaccgatatagaccactgc	Protospacer
* **  ***** *********** *****  *

27. spacer 2.2|2943279|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP022170 (Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence) position: , mismatch: 7, identity: 0.781

gacaacgcatcaagaccgatatacaccacgcc	CRISPR spacer
gtcatggcatccagaccgatatagaccactgc	Protospacer
* **  ***** *********** *****  *

28. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

ttctcggcgcggcgcaatatcccggc-gcacgc	CRISPR spacer
ctggcggcgcggggcaatatcgcggcggcatg-	Protospacer
.*  ******** ******** **** ***.*

29. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

ttctcggcgcggcgcaatatcccggc-gcacgc	CRISPR spacer
ctggcggcgcggggcaatatcgcggcggcatg-	Protospacer
.*  ******** ******** **** ***.*

30. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 7, identity: 0.781

ttctcggcgcggcgcaatatcccggc-gcacgc	CRISPR spacer
ctggcggcgcggggcaatatcgcggcggcatg-	Protospacer
.*  ******** ******** **** ***.*

31. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

32. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

33. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

34. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

35. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

36. spacer 2.12|2943889|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 7, identity: 0.781

tagtcga--tcggtctggagcagataaaccggca	CRISPR spacer
--atcggccttggtcaggagcagatagaccggca	Protospacer
  .***.  *.**** **********.*******

37. spacer 2.13|2943950|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to KX657793 (Mycobacterium phage DarthPhader, complete genome) position: , mismatch: 7, identity: 0.781

tttgtccagttcggcgatgcggcgttctgcgg	CRISPR spacer
cttgtccagttcggctatgcggcggtcgaacg	Protospacer
.************** ******** ** .  *

38. spacer 2.19|2943279|31|NZ_CP012514|PILER-CR matches to MF495478 (Aeromonas salmonicida plasmid pS121-1b, complete sequence) position: , mismatch: 7, identity: 0.774

gacaacgcatcaagaccgatatacaccacgc	CRISPR spacer
gtcatggcatccagaccgatatagaccactg	Protospacer
* **  ***** *********** *****

39. spacer 2.19|2943279|31|NZ_CP012514|PILER-CR matches to NZ_CP022170 (Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence) position: , mismatch: 7, identity: 0.774

gacaacgcatcaagaccgatatacaccacgc	CRISPR spacer
gtcatggcatccagaccgatatagaccactg	Protospacer
* **  ***** *********** *****

40. spacer 2.19|2943279|31|NZ_CP012514|PILER-CR matches to NZ_CP038450 (Aeromonas media strain R50-22 plasmid pAeme6, complete sequence) position: , mismatch: 7, identity: 0.774

gacaacgcatcaagaccgatatacaccacgc	CRISPR spacer
gtcatggcatccagaccgatatagaccactg	Protospacer
* **  ***** *********** *****

41. spacer 1.11|2925981|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

gacgacaaaattaatattgttggctggcgtgt	CRISPR spacer
aacgacaaaattaatattgatggcccattttt	Protospacer
.****************** ****. .. * *

42. spacer 1.13|2926103|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 8, identity: 0.75

----ttcagagaattgccgccaatagaacagcgcaa	CRISPR spacer
gcgcttc----aatcgccgccaattgaacagcgcgg	Protospacer
    ***    ***.********* *********..

43. spacer 1.23|2926715|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024786 (Nostoc flagelliforme CCNUN1 plasmid pNFSY01, complete sequence) position: , mismatch: 8, identity: 0.75

tgctacaaatggcactccatttattattccgc	CRISPR spacer
tagaagaaaaggcactgcatttattattcaac	Protospacer
*.  * *** ****** ************ .*

44. spacer 1.23|2926715|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026687 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM5, complete sequence) position: , mismatch: 8, identity: 0.75

tgctacaaatggcactccatttattattccgc	CRISPR spacer
tagaagaaaaggcactgcatttattattcaac	Protospacer
*.  * *** ****** ************ .*

45. spacer 2.1|2943218|32|NZ_CP012514|CRISPRCasFinder,CRT matches to JX434031 (Pseudomonas phage JBD24, complete genome) position: , mismatch: 8, identity: 0.75

taact--catcacatccgcgtcagacctcgtgac	CRISPR spacer
--actgccatcacattcgcggcagacctcgccga	Protospacer
  ***  ********.**** *********. .

46. spacer 2.2|2943279|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

gacaacgcatcaagaccgatatacaccacgcc	CRISPR spacer
ctgagtgcatcgaggccgatatacaccacggc	Protospacer
   *..*****.**.*************** *

47. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.75

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
agggaaaaccgtgacacctgtaaatacgacac	Protospacer
  *** *** *************** * .*.*

48. spacer 2.4|2943401|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 8, identity: 0.75

agcaaactcagtggcagcggcggtgcagtttt	CRISPR spacer
accaaaatcagtggcagcggctgtgctacatc	Protospacer
* **** ************** **** .. *.

49. spacer 2.5|2943462|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 8, identity: 0.75

agcaaactcagtggcagcggcggtgcagtttt	CRISPR spacer
accaaaatcagtggcagcggctgtgctacatc	Protospacer
* **** ************** **** .. *.

50. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448563 (Streptococcus satellite phage Javan601, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

51. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448565 (Streptococcus satellite phage Javan603, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

52. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448571 (Streptococcus satellite phage Javan609, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

53. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448575 (Streptococcus satellite phage Javan612, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

54. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448567 (Streptococcus satellite phage Javan605, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

55. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448574 (Streptococcus satellite phage Javan611, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

56. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448578 (Streptococcus satellite phage Javan615, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

57. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448577 (Streptococcus satellite phage Javan614, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

58. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448573 (Streptococcus satellite phage Javan610, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

59. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448568 (Streptococcus satellite phage Javan606, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

60. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448570 (Streptococcus satellite phage Javan608, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

61. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448564 (Streptococcus satellite phage Javan602, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

62. spacer 2.6|2943523|32|NZ_CP012514|CRISPRCasFinder,CRT matches to MK448566 (Streptococcus satellite phage Javan604, complete genome) position: , mismatch: 8, identity: 0.75

tctaccctatctaacccattagaataaaagga	CRISPR spacer
gcaaccctatctaactcgttagaataaatttc	Protospacer
 * ************.*.**********

63. spacer 2.14|2944011|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN693945 (Marine virus AFVG_250M952, complete genome) position: , mismatch: 8, identity: 0.75

---gctcggggaagtatcaaccagcagataacggt	CRISPR spacer
tttgctt---taagtataaaccagccgataacggc	Protospacer
   ***.    ****** ******* ********.

64. spacer 2.14|2944011|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 8, identity: 0.75

gctcggggaagtatcaaccagcagataacggt	CRISPR spacer
attatggaaactatcaaccagcagataatgtt	Protospacer
..*  **.** *****************.* *

65. spacer 2.19|2943279|31|NZ_CP012514|PILER-CR matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 8, identity: 0.742

gacaacgcatcaagaccgatatacaccacgc	CRISPR spacer
ctgagtgcatcgaggccgatatacaccacgg	Protospacer
   *..*****.**.***************

66. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.742

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
agggaaaaccgtgacacctgtaaatacgaca	Protospacer
  *** *** *************** * .*.

67. spacer 1.2|2925431|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
tcggctggctcatttccggtttctgggtgacc	Protospacer
 .** ******** ***********  *   *

68. spacer 1.2|2925431|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

atggatggctcatatccggtttctgtttctgc	CRISPR spacer
tcggctggctcatttccggtttctgggtgacc	Protospacer
 .** ******** ***********  *   *

69. spacer 1.11|2925981|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017833 (Butyrivibrio hungatei strain MB2003 plasmid pNP6, complete sequence) position: , mismatch: 9, identity: 0.719

gacgacaaaattaatattgttggctggcgtgt	CRISPR spacer
cctgacaaaattaatgtttttggctgtcaggc	Protospacer
  .************.** ******* *. *.

70. spacer 1.15|2926225|33|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_014825 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence) position: , mismatch: 9, identity: 0.727

gctgtcgtatatccgttacgcaacccgcgtgcg	CRISPR spacer
gtggtcgtatatcctttacgcaaaccgctgaac	Protospacer
*. *********** ******** ****  .

71. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN693670 (Marine virus AFVG_250M508, complete genome) position: , mismatch: 9, identity: 0.719

actggaggagaatttgatgcaggtgaagcgtc	CRISPR spacer
agattagaagaatttgacgcaggtgaaggcta	Protospacer
*    **.*********.**********  *

72. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN693662 (Marine virus AFVG_250M383, complete genome) position: , mismatch: 9, identity: 0.719

actggaggagaatttgatgcaggtgaagcgtc	CRISPR spacer
agattagaagaatttgacgcaggtgaaggcta	Protospacer
*    **.*********.**********  *

73. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN694314 (Marine virus AFVG_250M513, complete genome) position: , mismatch: 9, identity: 0.719

actggaggagaatttgatgcaggtgaagcgtc	CRISPR spacer
agattagaagaatttgacgcaggtgaaggcta	Protospacer
*    **.*********.**********  *

74. spacer 1.23|2926715|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgctacaaatggcactccatttattattccgc	CRISPR spacer
cgccccacatggcattccatttattattagcg	Protospacer
.**. ** ******.*************

75. spacer 1.23|2926715|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgctacaaatggcactccatttattattccgc	CRISPR spacer
cgccccacatggcattccatttattattagcg	Protospacer
.**. ** ******.*************

76. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
gcgttcacgctgcgcaatatcccggcgcgcga	Protospacer
 . *. .*** *****************.**

77. spacer 2.9|2943706|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN694334 (Marine virus AFVG_250M1054, complete genome) position: , mismatch: 9, identity: 0.719

agtgccatcatcccactcgcaaagattcagca	CRISPR spacer
ggtgccatcagccaactcgcaaagccgaacct	Protospacer
.********* ** ********** .  * *

78. spacer 2.13|2943950|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tttgtccagttcggcgatgcggcgttctgcgg	CRISPR spacer
ggaatgaggtccggcaatgcggcgttctgcgg	Protospacer
   .*  .**.****.****************

79. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349325 (Cyanophage S-RIM12 isolate W1_24_0910, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

80. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349322 (Cyanophage S-RIM12 isolate Sn_31_0910, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

81. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349320 (Cyanophage S-RIM12 isolate RW_29_1109, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

82. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349310 (Cyanophage S-RIM12 isolate RW_01_0310, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

83. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349321 (Cyanophage S-RIM12 isolate Sn_07_0910, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

84. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349324 (Cyanophage S-RIM12 isolate W1_12_0610, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

85. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349314 (Cyanophage S-RIM12 isolate RW_07_1112, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

86. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349316 (Cyanophage S-RIM12 isolate RW_22_0110, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

87. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KJ019063 (Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttct	Protospacer
  .  ** ********** ********* *

88. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KJ019027 (Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttct	Protospacer
  .  ** ********** ********* *

89. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349315 (Cyanophage S-RIM12 isolate RW_14_0101, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

90. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349317 (Cyanophage S-RIM12 isolate RW_25_0210, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

91. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to NC_019444 (Synechococcus phage S-MbCM6, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttct	Protospacer
  .  ** ********** ********* *

92. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KJ019128 (Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

93. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to NC_015285 (Prochlorococcus phage Syn33, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

94. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349309 (Cyanophage S-RIM12 isolate Np_22_1112, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

95. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349319 (Cyanophage S-RIM12 isolate RW_28_1109, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

96. spacer 2.20|2943340|31|NZ_CP012514|PILER-CR matches to KX349318 (Cyanophage S-RIM12 isolate RW_27_0310, complete genome) position: , mismatch: 9, identity: 0.71

ccggacaacagtgacacctgtaaattctgcg	CRISPR spacer
aaactcaccagtgacaccagtaaattcttca	Protospacer
  .  ** ********** ********* *.

97. spacer 1.18|2926410|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN694051 (Marine virus AFVG_250M33, complete genome) position: , mismatch: 10, identity: 0.688

actggaggagaatttgatgcaggtgaagcgtc	CRISPR spacer
cgcttagaagaatttgatgctggtgaaggcta	Protospacer
  .  **.************ *******  *

98. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349325 (Cyanophage S-RIM12 isolate W1_24_0910, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

99. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349322 (Cyanophage S-RIM12 isolate Sn_31_0910, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

100. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349320 (Cyanophage S-RIM12 isolate RW_29_1109, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

101. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349310 (Cyanophage S-RIM12 isolate RW_01_0310, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

102. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349321 (Cyanophage S-RIM12 isolate Sn_07_0910, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

103. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349324 (Cyanophage S-RIM12 isolate W1_12_0610, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

104. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349314 (Cyanophage S-RIM12 isolate RW_07_1112, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

105. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349316 (Cyanophage S-RIM12 isolate RW_22_0110, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

106. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KJ019063 (Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttctg	Protospacer
  .  ** ********** ********* *

107. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KJ019027 (Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttctg	Protospacer
  .  ** ********** ********* *

108. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349315 (Cyanophage S-RIM12 isolate RW_14_0101, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

109. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349317 (Cyanophage S-RIM12 isolate RW_25_0210, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

110. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NC_019444 (Synechococcus phage S-MbCM6, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttctg	Protospacer
  .  ** ********** ********* *

111. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KJ019128 (Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

112. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NC_015285 (Prochlorococcus phage Syn33, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

113. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349309 (Cyanophage S-RIM12 isolate Np_22_1112, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

114. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349319 (Cyanophage S-RIM12 isolate RW_28_1109, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

115. spacer 2.3|2943340|32|NZ_CP012514|CRISPRCasFinder,CRT matches to KX349318 (Cyanophage S-RIM12 isolate RW_27_0310, complete genome) position: , mismatch: 10, identity: 0.688

ccggacaacagtgacacctgtaaattctgcgc	CRISPR spacer
aaactcaccagtgacaccagtaaattcttcag	Protospacer
  .  ** ********** ********* *.

116. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 10, identity: 0.688

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
cggcatgcgcggcgcaatatcctggggcaccg	Protospacer
.  .  ****************.** ****

117. spacer 2.7|2943584|32|NZ_CP012514|CRISPRCasFinder,CRT matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 10, identity: 0.688

ttctcggcgcggcgcaatatcccggcgcacgc	CRISPR spacer
cggcgtgcgcggcgcaatatcctggggcaccg	Protospacer
.  .  ****************.** ****

118. spacer 2.13|2943950|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU140623 (Sinorhizobium sp. M14 plasmid pSinB, complete sequence) position: , mismatch: 10, identity: 0.688

tttgtccagttcggcgatgcggcgttctgcgg	CRISPR spacer
cgcttccagttcggcgatgcgctgttcgatcg	Protospacer
. . ***************** .**** .. *

119. spacer 2.15|2944072|32|NZ_CP012514|CRISPRCasFinder,CRT,PILER-CR matches to MN694012 (Marine virus AFVG_250M887, complete genome) position: , mismatch: 10, identity: 0.688

tgcgaaatagtcacgtgagcaacgccgacaag	CRISPR spacer
ggcgtaatagttacgtgagcaacgtaagtacc	Protospacer
 *** ******.************. ...*

120. spacer 1.1|2925370|32|NZ_CP012514|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttttcagcccttgccgactgcggaacgcccct	CRISPR spacer
cgccgcacccttgccgactgcgggatgcccga	Protospacer
. ..  .****************.*.****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1059879 : 1106719

Salmonella_phage(87.27%)

holin,tail,capsid,integrase

attL 1046701:1046716|attR 1086121:1086136

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1046701:1046716	attL	NA	NA	NA	NA
WP_023262989.1\|1059879_1061172_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.7e-252	99.8
WP_000065276.1\|1061216_1061465_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001237030.1\|1061505_1061745_-	DUF4060 family protein	H6WRW9	Salmonella_phage	9.7e-37	98.7
WP_077905217.1\|1061787_1062945_-	recombinase RecT	S4TTE8	Salmonella_phage	1.8e-216	99.5
WP_001525214.1\|1062907_1065823_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	89.4
WP_023262988.1\|1065945_1066296_-	hypothetical protein	S4TSN6	Salmonella_phage	5.6e-49	77.6
WP_000551860.1\|1066317_1066488_-	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	1.3e-14	80.0
WP_077914912.1\|1066480_1066747_-	hypothetical protein	NA	NA	NA	NA
WP_024150574.1\|1066790_1067201_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_000370218.1\|1067320_1067560_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	3.2e-11	44.0
WP_077914913.1\|1067525_1067900_+	hypothetical protein	S4TTD7	Salmonella_phage	3.6e-62	97.6
WP_024150573.1\|1067990_1068968_+	hypothetical protein	H6WRX7	Salmonella_phage	5.8e-160	98.4
WP_000800012.1\|1068970_1069720_+	ATP-binding protein	S4TNF5	Salmonella_phage	4.3e-139	100.0
WP_023262985.1\|1069730_1069934_+	DUF977 family protein	H6WRX9	Salmonella_phage	4.0e-31	100.0
WP_077914926.1\|1069943_1070078_+	DUF977 family protein	H6WRX9	Salmonella_phage	1.4e-16	95.5
WP_000065482.1\|1070074_1070608_+	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	3.8e-41	67.9
WP_000704096.1\|1070634_1071627_-	peptidase M85	NA	NA	NA	NA
WP_001217669.1\|1071896_1072130_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_000807548.1\|1072241_1072463_+	hypothetical protein	NA	NA	NA	NA
WP_000929790.1\|1072545_1073148_+	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_000178134.1\|1073147_1073354_+	hypothetical protein	H6WRY8	Salmonella_phage	2.3e-34	98.5
WP_023262984.1\|1073356_1073968_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.8e-90	96.1
WP_000801753.1\|1073964_1074102_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.9e-09	81.6
WP_001047624.1\|1074101_1074911_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.2e-110	69.5
WP_023262982.1\|1075213_1075711_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	3.1e-37	52.7
WP_023221874.1\|1076050_1076239_+	hypothetical protein	NA	NA	NA	NA
WP_001294873.1\|1076328_1076718_+	membrane protein	K7PHB9	Enterobacterial_phage	4.8e-41	72.5
WP_000226307.1\|1076704_1076986_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.6e-36	80.6
WP_023221873.1\|1076985_1077600_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	2.0e-94	82.4
WP_023221872.1\|1077596_1078139_+	DUF2514 family protein	NA	NA	NA	NA
WP_023262981.1\|1078241_1078745_+	hypothetical protein	NA	NA	NA	NA
WP_023221870.1\|1078805_1079435_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	7.8e-110	99.0
WP_023262979.1\|1079437_1081060_+	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.1
WP_023262978.1\|1081059_1082529_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.2e-281	99.6
WP_139134618.1\|1082413_1083151_+\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	6.0e-109	96.0
WP_000873159.1\|1083165_1084398_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.6e-228	99.5
WP_000128058.1\|1084402_1084900_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.0e-88	100.0
WP_023221867.1\|1084911_1085853_+	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	7.0e-179	99.7
WP_023221866.1\|1085894_1086263_+	hypothetical protein	A0A0M4RTX5	Salmonella_phage	3.3e-60	99.2
1086121:1086136	attR	NA	NA	NA	NA
WP_023221865.1\|1086228_1086636_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.1e-72	99.3
WP_023262467.1\|1086632_1087187_+	hypothetical protein	A0A0M4S631	Salmonella_phage	2.4e-94	98.9
WP_023221863.1\|1087173_1087563_+	hypothetical protein	A0A0M3ULK0	Salmonella_phage	7.8e-68	97.7
WP_000538608.1\|1087537_1088104_+	hypothetical protein	A0A0M4R331	Salmonella_phage	1.8e-105	99.5
WP_001051850.1\|1088106_1089258_+	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	2.5e-215	100.0
WP_000501635.1\|1089268_1089709_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	9.4e-78	100.0
WP_023262851.1\|1089712_1090165_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	2.0e-78	99.3
WP_023262852.1\|1090342_1092352_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	0.0e+00	99.3
WP_000353826.1\|1092351_1092927_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
WP_000155111.1\|1092926_1093229_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
WP_023262853.1\|1093231_1094305_+	hypothetical protein	A0A0M4QX01	Salmonella_phage	4.7e-187	96.3
WP_023137771.1\|1094301_1094652_+	hypothetical protein	A0A0M4RTY3	Salmonella_phage	4.5e-22	66.7
WP_130525691.1\|1094655_1095396_+	hypothetical protein	NA	NA	NA	NA
WP_038393821.1\|1095460_1096216_+	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	8.5e-127	91.6
WP_001526515.1\|1096215_1096569_+	hypothetical protein	A0A0M4R339	Salmonella_phage	2.1e-59	96.6
WP_023262651.1\|1096569_1097769_+	bacteriophage protein	A0A0M4RD32	Salmonella_phage	2.6e-215	97.7
WP_023262652.1\|1097765_1098446_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.7e-126	96.9
WP_023262653.1\|1098445_1099960_+	hypothetical protein	S4TP62	Salmonella_phage	2.5e-117	62.8
WP_023187585.1\|1099974_1100493_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	2.3e-46	52.6
WP_071786695.1\|1100741_1100927_+	hypothetical protein	NA	NA	NA	NA
WP_000776343.1\|1101578_1102781_-	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	6.3e-209	100.0
WP_072156355.1\|1102989_1103346_+	recombinase family protein	A0A1S6L009	Salmonella_phage	3.3e-49	84.3
WP_000497440.1\|1103473_1103680_-	DinI-like family protein	S4TNM0	Salmonella_phage	1.8e-31	100.0
WP_000193775.1\|1104106_1106719_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	3.7e-20	22.8

DBSCAN-SWA_2

2032152 : 2042768

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157305.1\|2032152_2033583_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_000377042.1\|2033656_2034352_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_017465543.1\|2034431_2034743_-	hypothetical protein	NA	NA	NA	NA
WP_054540967.1\|2035392_2036604_+	porin	Q1MVN1	Enterobacteria_phage	1.3e-108	56.2
WP_024131163.1\|2036863_2037052_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2037062_2037275_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_017465541.1\|2037729_2038998_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.5e-226	91.7
WP_000394197.1\|2039000_2039420_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_001532308.1\|2039546_2039708_-	hypothetical protein	NA	NA	NA	NA
WP_017465540.1\|2040188_2040986_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001736108.1\|2041357_2041648_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.0e-08	49.1
WP_017465538.1\|2042294_2042768_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	1.6e-38	76.6

DBSCAN-SWA_3

4263596 : 4284045

Burkholderia_phage(40.0%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022544687.1\|4263596_4264325_-	hypothetical protein	A0A077SLK3	Escherichia_phage	7.3e-35	37.3
WP_017465885.1\|4265063_4265519_-	hypothetical protein	NA	NA	NA	NA
WP_017465886.1\|4265515_4266121_-	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_017465887.1\|4266125_4267895_-\|tail	tail protein	A0A0M3ULH6	Salmonella_phage	3.2e-52	40.5
WP_000359504.1\|4267897_4268530_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_000951730.1\|4268522_4269638_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.1e-101	52.2
WP_001093501.1\|4269628_4269988_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_001095011.1\|4270151_4271699_-	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_000703628.1\|4271698_4272628_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	7.9e-151	84.1
WP_000593184.1\|4272624_4272987_-	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_017465888.1\|4273314_4274037_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_017465889.1\|4274046_4275090_-	phage late control D family protein	A4JWL3	Burkholderia_virus	6.5e-77	45.9
WP_017465890.1\|4275077_4275287_-	membrane protein	A4JWL2	Burkholderia_virus	2.8e-16	58.8
WP_017465891.1\|4275286_4276240_-	hypothetical protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_054540978.1\|4276239_4278594_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	4.0e-66	30.9
WP_001185654.1\|4278690_4278819_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003639.1\|4278778_4279096_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907494.1\|4279147_4279672_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_000729852.1\|4279671_4281099_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000875314.1\|4281088_4281286_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000449433.1\|4281282_4281738_-	hypothetical protein	NA	NA	NA	NA
WP_017465892.1\|4281898_4282213_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-19	48.2
WP_017465893.1\|4282225_4282831_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	4.2e-60	59.9
WP_001226439.1\|4282833_4283121_-	membrane protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_000615248.1\|4283697_4284045_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012514

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection