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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011400 Bordetella pertussis strain B3629 chromosome 5 crisprs cas3,DinG,csa3,DEDDh 0 0 28 0

Results visualization

1. NZ_CP011400
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011400_1 713831-713925 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011400_2 1609214-1609341 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011400_3 3146831-3146940 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011400_4 3519215-3519299 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011400_5 3620285-3620378 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 307899 : 369090 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_4 374414 : 420605 51 uncultured_Caudovirales_phage(18.18%) transposase,tRNA,tail,terminase NA
DBSCAN-SWA_5 426771 : 480701 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_6 571579 : 620843 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_7 630455 : 695395 58 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_8 714795 : 777946 54 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_9 783930 : 843993 49 uncultured_Mediterranean_phage(37.5%) transposase,tRNA,holin,protease NA
DBSCAN-SWA_10 1034386 : 1102873 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1163364 : 1218852 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_12 1511422 : 1559437 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_13 1606856 : 1662285 50 uncultured_Caudovirales_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_14 2015443 : 2076791 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_15 2097582 : 2168735 56 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_16 2252936 : 2304108 48 Salmonella_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_17 2402403 : 2443073 43 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_18 2447184 : 2529319 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_19 2553244 : 2600953 40 Pelagibacter_phage(25.0%) transposase NA
DBSCAN-SWA_20 2608950 : 2672698 56 uncultured_Mediterranean_phage(22.22%) transposase,protease NA
DBSCAN-SWA_21 2681457 : 2727027 45 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_22 3096433 : 3150174 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_23 3156329 : 3215629 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_24 3230567 : 3288640 46 Catovirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_25 3438554 : 3492749 54 Paramecium_bursaria_Chlorella_virus(14.29%) transposase,protease NA
DBSCAN-SWA_26 3503365 : 3556666 44 Prochlorococcus_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_27 3763114 : 3837458 57 Staphylococcus_phage(15.38%) transposase NA
DBSCAN-SWA_28 4023318 : 4076750 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage