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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011440 Bordetella pertussis strain B1838 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 26 0

Results visualization

1. NZ_CP011440
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011440_1 250580-250664 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011440_2 623988-624097 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011440_3 1842030-1842157 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011440_4 2910729-2910845 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011440_5 3625499-3625592 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164894 : 225393 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_4 233325 : 286913 47 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 555298 : 614598 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620753 : 674494 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723432 : 763382 29 Pseudomonas_phage(33.33%) tRNA,protease,integrase,transposase attL 720680:720698|attR 740568:740586
DBSCAN-SWA_8 773309 : 821976 47 Bovine_alphaherpesvirus(10.0%) tRNA,transposase,protease,holin NA
DBSCAN-SWA_9 997837 : 1101267 94 Bacillus_virus(27.27%) tRNA,transposase NA
DBSCAN-SWA_10 1131653 : 1202624 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1250018 : 1330893 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1450288 : 1514504 59 Salmonella_phage(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_13 1744239 : 1792254 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_14 1853816 : 1913086 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_15 1923326 : 1967649 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_16 1997422 : 2061791 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2248259 : 2309607 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2330398 : 2401552 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2497380 : 2556161 49 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2608697 : 2675197 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2838811 : 2904395 52 Oenococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 2921965 : 2982992 51 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_23 2986745 : 3122951 117 uncultured_Caudovirales_phage(10.0%) tRNA,transposase NA
DBSCAN-SWA_24 3236272 : 3305275 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_25 3320721 : 3420834 107 uncultured_Caudovirales_phage(14.29%) transposase,protease,terminase,tRNA,tail NA
DBSCAN-SWA_26 4007540 : 4072452 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage