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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011445 Bordetella pertussis strain B3640 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 32 0

Results visualization

1. NZ_CP011445
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011445_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011445_2 433083-433176 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011445_3 996352-996446 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011445_4 2994387-2994514 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011445_5 3436036-3436145 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 219510 47 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) transposase,protease,tRNA NA
DBSCAN-SWA_4 225502 : 287973 54 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 651611 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656935 : 703126 50 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tRNA,tail NA
DBSCAN-SWA_8 709292 : 763222 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885811 : 953787 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997316 : 1069834 59 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073587 : 1135663 51 Catovirus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1289008 : 1354316 57 Bacillus_virus(18.18%) transposase,tRNA NA
DBSCAN-SWA_13 1382431 : 1448931 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_14 1477102 : 1515692 35 Emiliania_huxleyi_virus(14.29%) transposase,protease NA
DBSCAN-SWA_15 1548504 : 1601922 56 Planktothrix_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_16 1615234 : 1668349 47 Rhodococcus_phage(12.5%) transposase NA
DBSCAN-SWA_17 1704298 : 1759889 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_18 2157491 : 2215154 52 Bacillus_virus(25.0%) transposase NA
DBSCAN-SWA_19 2219636 : 2281815 56 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_20 2285367 : 2351835 50 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_21 2399229 : 2480104 59 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_22 2564760 : 2621166 50 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_23 2889830 : 2930160 36 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_24 2943661 : 3009209 58 Lake_Baikal_phage(20.0%) transposase,protease,tRNA NA
DBSCAN-SWA_25 3036992 : 3077683 37 Klosneuvirus(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_26 3088887 : 3219431 113 uncultured_Caudovirales_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_27 3238156 : 3286823 47 Erwinia_phage(10.0%) transposase,holin,protease,tRNA NA
DBSCAN-SWA_28 3296750 : 3336700 26 Mycobacterium_phage(50.0%) transposase,integrase,protease,tRNA attL 3319547:3319565|attR 3339435:3339453
DBSCAN-SWA_29 3385638 : 3439379 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_30 3445534 : 3504834 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_31 3519772 : 3591642 60 Planktothrix_phage(10.0%) transposase,tRNA NA
DBSCAN-SWA_32 4010058 : 4074970 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage