CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012892	Lactobacillus gallinarum strain HFD4 plasmid pMKG02, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP012896	Lactobacillus gallinarum strain HFD4 plasmid pMKG06, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP012893	Lactobacillus gallinarum strain HFD4 plasmid pMKG03, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP012895	Lactobacillus gallinarum strain HFD4 plasmid pMKG05, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP012891	Lactobacillus gallinarum strain HFD4 plasmid pMKG01, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP012890	Lactobacillus gallinarum strain HFD4 chromosome, complete genome	3 crisprs	cas3,cas14j,RT,csa3,cas14k,DEDDh,WYL,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	6	20	23	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012890_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012890_1

1911878-1914704

TypeV

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CRT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	CRISPRCasFinder
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	PILER-CR

42 spacers

cas2,cas1,cas4,cas7,cas8c,cas5

The CRISPR arrays of NZ_CP012890_1

>merge|NZ_CP012890|1|1911878-1914704|CRT,CRISPRCasFinder,PILER-CR
TACACCCACAAGTGCATCACAAGGAGTGCGACTAGCCGTACCCGACTAGCTCCTTGTCAACGATCTTATTTCAATCCACGCACTCACAAGGAGTGCGACTCTGCTTCTGGTAGTTTGATTCCTTTTGTTCTTTATTTCAATCCACGCACTCACAAGGAGTGCGACTTTTTTTAGTTTCTCGTATTCAAGTTCATTCAATCATTTCAATCCACGCACTCACAAGGAGTGCGACCAGCAAGCTGACCTTGCCCGCCAACAAGCCAAGTTTATTTCAATCCACGCACTCACAAGGAGTGCGACAGACAATTTTCCAAATCAAAACCACCAAATGTCTATTTCAATCCACGCACTCACAAGGAGTGCGACATAATTGCCTCGCTTCGTACGCCAGCCGTACAATATTTCAATCCACGCACTCACAAGGAGTGCGACGCCATTGTCGTTCGCATTCGCAAACTCCGAAGCAATTTCAATCCACGCACTCACAAGGAGTGCGACTGTGCAACATTTGTGCAACAGCTATTTTTTAGCAATTTCAATCCACGCACTCACAAGGAGTGCGACTACTTTTCTGGATTATTTCTATGCCATAAATATTATTTCAATCCACGCACTCACAAGGAGTGCGACTTAAAAATGGTCTGGACTCTTACATTTATGAGGAATTTCAATCCACGCACTCACAAGGAGTGCGACACCCACTTTACTCAGTAAAGAGCGGTGGCTGGATTATTTCAATCCACGCACTCACAAGGAGTGCGACTCACAGGCAACCGAGCCTATATCGTCTTATAATTAATTTCAATCCACGCACTCACAAGGAGTGCGACTGCCAATCGGCAGACCTCCTTCCACTGTGCTTGTTATTTCAATCCACGCACTCACAAGGAGTGCGACTTAACAAGTATCGTAGTTGTCGTTCCATATGCTATTTCAATCCACGCACTCACAAGGAGTGCGACCACCAGCAACTTCATAAAAACCGTCATGGGTATTATTTCAATCCACGCACTCACAAGGAGTGCGACAGCGATGAAGACGGCTGGACGATCCCTTGATGATATTTCAATCCACGCACTCACAAGGAGTGCGACAAGCTTGTTCTTTGATGATTTGCTCCATGTTATTATTTCAATCCACGCACTCACAAGGAGTGCGACGACATCTTTGATTAGATCAAATAACACACCATCAATTTCAATCCACGCACTCACAAGGAGTGCGACCTCCATAATTTTTCTCCTAGTTGATGCCTGACAATTATTTCAATCCACGCACTCACAAGGAGTGCGACGAGAAAGCTTGTCATGCGATTTACAAGACCATCATATTTCAATCCACGCACTCACAAGGAGTGCGACCTACCATATAAGTGATATAACAGCTAATAAAGGTATTTCAATCCACGCACTCACAAGGAGTGCGACTAGTGTGATTGCACAAGTTTTGGCAGGTGGCATTATTTCAATCCACGCACTCACAAGGAGTGCGACAGGACAGACGGACGCGATAGGACGACACAATGGTATTTCAATCCACGCACTCACAAGGAGTGCGACTTTACATTACTAAAAACAGAATTAACAGCTTTTCTATTTCAATCCACGCACTCACAAGGAGTGCGACAAGGGCGGAACTCGTGAGGCATTCCTCAAGTACGCTATTTCAATCCACGCACTCACAAGGAGTGCGACCCAATCAAGTCTGGCGTTCCGTTTTCCATGCCTTTATTTCAATCCACGCACTCACAAGGAGTGCGACGTCAAAGATCACCAATAATATATAAAGAAAAAGTAATTTCAATCCACGCACTCACAAGGAGTGCGACGCACGATCAAGCAAAAAAAAGATTCGGGTGAGATAATTTCAATCCACGCACTCACAAGGAGTGCGACTTGATTGATACGGACAAAACTTTGTCGCAACAAGATTTCAATCCACGCACTCACAAGGAGTGCGACTTTTTGTGGGCGCAATAGTGTGCTTATGTTTTTTATTTCAATCCACGCACTCACAAGGAGTGCGACGAAAAATAGTAATGGCAAGATTGATTTTAAGGTCAATTTCAATCCACGCACTCACAAGGAGTGCGACAGTATAACAATGCCCATCTTAGCCCACGAAATGTAATTTCAATCCACGCACTCACAAGGAGTGCGACTTACTAATTGTTTGATGAAAACTAGTGATGTTTTTATTTCAATCCACGCACTCACAAGGAGTGCGACTTGTCCGTTTGCGTGAGCGGCAGAACCCATCATCTTATTTCAATCCACGCACTCACAAGGAGTGCGACACCTTGTCCGGATACTTCGATGTATGCAATAGCGTATTTCAATCCACGCACTCACAAGGAGTGCGACGAATATCCAGCTGCAGTTTGGATGAATGAGCATAATTTCAATCCACGCACTCACAAGGAGTGCGACTTGGAAACGTACACACGAGTACAATTATCAAATAATTTCAATCCACGCACTCACAAGGAGTGCGACGCTTTAGCTTCTTTTATTGGTGGGCTACTATTCCATTTCAATCCACGCACTCACAAGGAGTGCGACACAAAAAGTGATGGTAATGACTCCATCCATTATTATTTCAATCCACGCACTCACAAGGAGTGCGACTCCAAACGTGATAACGGTATCGGGCGGTAAGAGTATTTCAATCCACGCACTCACAAGGAGTGCGACGTCTGGATTCTTACATTTATAAGGAGGACTGTTAATATTTCAATCCACGCACTCACAAGGAGTGCGACCATTACAAACTGTTGAAGTGCGGTATTAAACATTATTTCAATCCACGCACTCACAAGGAGTGCGAC

>NZ_CP012890|1|1|1911878-1914704|CRT
TACACCCACAAGTGCATCACAAGGAGTGCGAC	TAGCCGTACCCGACTAGCTCCTTGTCAACGATCTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCTGCTTCTGGTAGTTTGATTCCTTTTGTTCTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTTTAGTTTCTCGTATTCAAGTTCATTCAATC
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CAGCAAGCTGACCTTGCCCGCCAACAAGCCAAGTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGACAATTTTCCAAATCAAAACCACCAAATGTCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ATAATTGCCTCGCTTCGTACGCCAGCCGTACAAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCCATTGTCGTTCGCATTCGCAAACTCCGAAGCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGTGCAACATTTGTGCAACAGCTATTTTTTAGCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TACTTTTCTGGATTATTTCTATGCCATAAATATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAAAAATGGTCTGGACTCTTACATTTATGAGGA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCCACTTTACTCAGTAAAGAGCGGTGGCTGGATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCACAGGCAACCGAGCCTATATCGTCTTATAATTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGCCAATCGGCAGACCTCCTTCCACTGTGCTTGTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAACAAGTATCGTAGTTGTCGTTCCATATGCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CACCAGCAACTTCATAAAAACCGTCATGGGTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGCGATGAAGACGGCTGGACGATCCCTTGATGAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGCTTGTTCTTTGATGATTTGCTCCATGTTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GACATCTTTGATTAGATCAAATAACACACCATCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTCCATAATTTTTCTCCTAGTTGATGCCTGACAATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAGAAAGCTTGTCATGCGATTTACAAGACCATCAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTACCATATAAGTGATATAACAGCTAATAAAGGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TAGTGTGATTGCACAAGTTTTGGCAGGTGGCATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGGACAGACGGACGCGATAGGACGACACAATGGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTACATTACTAAAAACAGAATTAACAGCTTTTCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGGGCGGAACTCGTGAGGCATTCCTCAAGTACGCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CCAATCAAGTCTGGCGTTCCGTTTTCCATGCCTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCAAAGATCACCAATAATATATAAAGAAAAAGTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCACGATCAAGCAAAAAAAAGATTCGGGTGAGATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGATTGATACGGACAAAACTTTGTCGCAACAAG
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTGTGGGCGCAATAGTGTGCTTATGTTTTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAAAAATAGTAATGGCAAGATTGATTTTAAGGTCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGTATAACAATGCCCATCTTAGCCCACGAAATGTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTACTAATTGTTTGATGAAAACTAGTGATGTTTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGTCCGTTTGCGTGAGCGGCAGAACCCATCATCTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCTTGTCCGGATACTTCGATGTATGCAATAGCGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAATATCCAGCTGCAGTTTGGATGAATGAGCATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGGAAACGTACACACGAGTACAATTATCAAATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCTTTAGCTTCTTTTATTGGTGGGCTACTATTCC
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACAAAAAGTGATGGTAATGACTCCATCCATTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCCAAACGTGATAACGGTATCGGGCGGTAAGAGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCTGGATTCTTACATTTATAAGGAGGACTGTTAAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CATTACAAACTGTTGAAGTGCGGTATTAAACATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC

>NZ_CP012890|1|1|1911944-1914704|CRISPRCasFinder
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCTGCTTCTGGTAGTTTGATTCCTTTTGTTCTT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTTTAGTTTCTCGTATTCAAGTTCATTCAAT
CATTTCAATCCACGCACTCACAAGGAGTGCGAC	CAGCAAGCTGACCTTGCCCGCCAACAAGCCAAGTT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGACAATTTTCCAAATCAAAACCACCAAATGTC
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	ATAATTGCCTCGCTTCGTACGCCAGCCGTACAA
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCCATTGTCGTTCGCATTCGCAAACTCCGAAGC
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGTGCAACATTTGTGCAACAGCTATTTTTTAGC
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TACTTTTCTGGATTATTTCTATGCCATAAATAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAAAAATGGTCTGGACTCTTACATTTATGAGG
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCCACTTTACTCAGTAAAGAGCGGTGGCTGGAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCACAGGCAACCGAGCCTATATCGTCTTATAATT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGCCAATCGGCAGACCTCCTTCCACTGTGCTTGT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAACAAGTATCGTAGTTGTCGTTCCATATGC
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	CACCAGCAACTTCATAAAAACCGTCATGGGTAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGCGATGAAGACGGCTGGACGATCCCTTGATGA
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGCTTGTTCTTTGATGATTTGCTCCATGTTAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GACATCTTTGATTAGATCAAATAACACACCATC
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTCCATAATTTTTCTCCTAGTTGATGCCTGACAAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAGAAAGCTTGTCATGCGATTTACAAGACCATCA
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTACCATATAAGTGATATAACAGCTAATAAAGG
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TAGTGTGATTGCACAAGTTTTGGCAGGTGGCAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGGACAGACGGACGCGATAGGACGACACAATGG
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTACATTACTAAAAACAGAATTAACAGCTTTTC
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGGGCGGAACTCGTGAGGCATTCCTCAAGTACGC
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	CCAATCAAGTCTGGCGTTCCGTTTTCCATGCCTT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCAAAGATCACCAATAATATATAAAGAAAAAGT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCACGATCAAGCAAAAAAAAGATTCGGGTGAGAT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGATTGATACGGACAAAACTTTGTCGCAACAA
GATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTGTGGGCGCAATAGTGTGCTTATGTTTTT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAAAAATAGTAATGGCAAGATTGATTTTAAGGTC
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGTATAACAATGCCCATCTTAGCCCACGAAATGT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTACTAATTGTTTGATGAAAACTAGTGATGTTTT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGTCCGTTTGCGTGAGCGGCAGAACCCATCATCT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCTTGTCCGGATACTTCGATGTATGCAATAGCG
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAATATCCAGCTGCAGTTTGGATGAATGAGCAT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGGAAACGTACACACGAGTACAATTATCAAAT
AATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCTTTAGCTTCTTTTATTGGTGGGCTACTATTC
CATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACAAAAAGTGATGGTAATGACTCCATCCATTAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCCAAACGTGATAACGGTATCGGGCGGTAAGAG
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCTGGATTCTTACATTTATAAGGAGGACTGTTAA
TATTTCAATCCACGCACTCACAAGGAGTGCGAC	CATTACAAACTGTTGAAGTGCGGTATTAAACAT
TATTTCAATCCACGCACTCACAAGGAGTGCGAC

>NZ_CP012890|1|1|1911945-1914704|PILER-CR
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCTGCTTCTGGTAGTTTGATTCCTTTTGTTCTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTTTAGTTTCTCGTATTCAAGTTCATTCAATC
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CAGCAAGCTGACCTTGCCCGCCAACAAGCCAAGTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGACAATTTTCCAAATCAAAACCACCAAATGTCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ATAATTGCCTCGCTTCGTACGCCAGCCGTACAAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCCATTGTCGTTCGCATTCGCAAACTCCGAAGCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGTGCAACATTTGTGCAACAGCTATTTTTTAGCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TACTTTTCTGGATTATTTCTATGCCATAAATATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAAAAATGGTCTGGACTCTTACATTTATGAGGA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCCACTTTACTCAGTAAAGAGCGGTGGCTGGATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCACAGGCAACCGAGCCTATATCGTCTTATAATTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TGCCAATCGGCAGACCTCCTTCCACTGTGCTTGTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTAACAAGTATCGTAGTTGTCGTTCCATATGCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CACCAGCAACTTCATAAAAACCGTCATGGGTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGCGATGAAGACGGCTGGACGATCCCTTGATGAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGCTTGTTCTTTGATGATTTGCTCCATGTTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GACATCTTTGATTAGATCAAATAACACACCATCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTCCATAATTTTTCTCCTAGTTGATGCCTGACAATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAGAAAGCTTGTCATGCGATTTACAAGACCATCAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CTACCATATAAGTGATATAACAGCTAATAAAGGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TAGTGTGATTGCACAAGTTTTGGCAGGTGGCATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGGACAGACGGACGCGATAGGACGACACAATGGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTACATTACTAAAAACAGAATTAACAGCTTTTCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AAGGGCGGAACTCGTGAGGCATTCCTCAAGTACGCT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CCAATCAAGTCTGGCGTTCCGTTTTCCATGCCTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCAAAGATCACCAATAATATATAAAGAAAAAGTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCACGATCAAGCAAAAAAAAGATTCGGGTGAGATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGATTGATACGGACAAAACTTTGTCGCAACAAG
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTTTTGTGGGCGCAATAGTGTGCTTATGTTTTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAAAAATAGTAATGGCAAGATTGATTTTAAGGTCA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	AGTATAACAATGCCCATCTTAGCCCACGAAATGTA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTACTAATTGTTTGATGAAAACTAGTGATGTTTTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGTCCGTTTGCGTGAGCGGCAGAACCCATCATCTT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACCTTGTCCGGATACTTCGATGTATGCAATAGCGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GAATATCCAGCTGCAGTTTGGATGAATGAGCATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TTGGAAACGTACACACGAGTACAATTATCAAATA
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GCTTTAGCTTCTTTTATTGGTGGGCTACTATTCC
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	ACAAAAAGTGATGGTAATGACTCCATCCATTATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	TCCAAACGTGATAACGGTATCGGGCGGTAAGAGT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	GTCTGGATTCTTACATTTATAAGGAGGACTGTTAAT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC	CATTACAAACTGTTGAAGTGCGGTATTAAACATT
ATTTCAATCCACGCACTCACAAGGAGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012890.1\|WP_060472298.1\|1905067_1906198_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP012890.1\|WP_014563208.1\|1914865_1915156_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012890.1\|WP_060472294.1\|1903496_1903898_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|320683
NZ_CP012890.1\|WP_060472292.1\|1902708_1902897_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274228
NZ_CP012890.1\|WP_014563207.1\|1915165_1916197_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP012890.1\|WP_060472299.1\|1906289_1907168_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP012890.1\|WP_060472302.1\|1916852_1917710_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP012890.1\|WP_060472305.1\|1926098_1926965_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NZ_CP012890.1\|WP_060472293.1\|1903162_1903504_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP012890.1\|WP_060471024.1\|1920841_1921891_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP012890.1\|WP_060472296.1\|1904436_1904634_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472306.1\|1926979_1928209_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP012890.1\|WP_060472297.1\|1904647_1904869_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472307.1\|1928323_1929814_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP012890.1\|WP_060472291.1\|1901943_1902693_-\|phage-antirepressor-KilAC-domain-containing-protein	unknown	unknown	gnl\|CDD\|226144
NZ_CP012890.1\|WP_060472301.1\|1916193_1916850_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP012890.1\|WP_012212135.1\|1917712_1919686_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP012890.1\|WP_060472300.1\|1909752_1911159_+\|ISLre2-family-transposase	unknown	unknown	gnl\|CDD\|284250
NZ_CP012890.1\|WP_150121927.1\|1903974_1904202_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472303.1\|1919685_1920429_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847

Protein	Function_ID	Function_description	E-value
NZ_CP012890.1\|WP_060472298.1\|1905067_1906198_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.54148e-41
NZ_CP012890.1\|WP_060472292.1\|1902708_1902897_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	0.000536313
NZ_CP012890.1\|WP_060472294.1\|1903496_1903898_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|320683	cd07324, M48C_Oma1-like, Oma1 peptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 subfamily C (also known as Oma1 peptidase or mitochondrial metalloendopeptidase OMA1), including similar peptidases containing tetratricopeptide (TPR) repeats, as well as uncharacterized proteins such as E. coli bepA (formerly yfgC), ycaL and loiP (formerly yggG), considered to be putative metallopeptidases. Oma1 peptidase is part of the quality control system in the inner membrane of mitochondria, with its catalytic site facing the matrix space. It cleaves and thereby promotes the turnover of mistranslated or misfolded membrane proteins. Oma1 can cleave the misfolded multi-pass membrane protein Oxa1, thus exerting a function similar to the ATP-dependent m-AAA protease for quality control of inner membrane proteins. It has been proposed that in the absence of m-AAA protease, proteolysis of Oxa1 is mediated by Oma1 in an ATP-independent manner. Homologs of Oma1 are present in higher eukaryotes, eubacteria and archaebacteria, suggesting that Oma1 is the founding member of a conserved family of membrane-embedded metallopeptidases, all containing the zinc metalloprotease motif (HEXXH). M48 peptidases proteolytically remove the C-terminal three residues of farnesylated proteins.	0.00350326
NZ_CP012890.1\|WP_060472300.1\|1909752_1911159_+\|ISLre2-family-transposase	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	1.27029e-20
NZ_CP012890.1\|WP_060472299.1\|1906289_1907168_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	4.28625e-61
NZ_CP012890.1\|WP_060472302.1\|1916852_1917710_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.60198e-108
NZ_CP012890.1\|WP_060472305.1\|1926098_1926965_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	6.62601e-113
NZ_CP012890.1\|WP_060471024.1\|1920841_1921891_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	6.55171e-76
NZ_CP012890.1\|WP_014563208.1\|1914865_1915156_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.68589e-27
NZ_CP012890.1\|WP_060472307.1\|1928323_1929814_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP012890.1\|WP_060472291.1\|1901943_1902693_-\|phage-antirepressor-KilAC-domain-containing-protein	gnl\|CDD\|226144	COG3617, COG3617, Prophage antirepressor [Transcription].	3.39371e-40
NZ_CP012890.1\|WP_060472301.1\|1916193_1916850_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.89625e-26
NZ_CP012890.1\|WP_060472306.1\|1926979_1928209_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	2.0587e-158
NZ_CP012890.1\|WP_012212135.1\|1917712_1919686_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	2.97564e-90
NZ_CP012890.1\|WP_014563207.1\|1915165_1916197_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	6.22974e-173
NZ_CP012890.1\|WP_060472293.1\|1903162_1903504_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.55373e-10
NZ_CP012890.1\|WP_060472303.1\|1919685_1920429_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	9.52321e-87

>NZ_CP012890.1|WP_060472300.1|1909752_1911159_+|ISLre2-family-transposase
MESIITDIVKIIKSENNVLAREKALMCYFFDLIGELMKLALEEVDVGLVDETKKQGYQIEKKNKRSVVTVFGEISYWRRRYVCPGRKAKYPLDQLMGYDKYKRYSVLAVKNILQVSAVATYRNTALAVNTLSSFNISHSQVGKLIVQAGKQIKAQQQSEERYDGITQKEKAPVLYLEGDGVVIKGTKKRLEFHRYQVCEDIINVSKTRRKRVQAKEFVSLSRLNALQEIKAYLANAYDLSDTLIISNADGGAGYAKKDFDEIVGRCKQHEHFLDVFHLNKKIKDRLGFMPAMQGKLISAVEFKYDRRLTDVILDTIESNLIDKLNTPENHENLRRLHGYLHRHWADIEPFKMRNLPVIKAIGCCESNHRKYTYRVKGQGKYWSEDGAEGILRVLTCIKNNELEYWLSSEFAGSEINAITEQELKAAARDSLKKRHESHLGIQRGALTAQTAGSSYLSKCNRMLNHINY
>NZ_CP012890.1|WP_060472299.1|1906289_1907168_+|YitT-family-protein
MDQLDKFNRRYNFLSKLSAAFFYSIAIAIALNFFWTPGHMYSSGITGFAQLINTVSERYLPFTLTTSFMYFILNFPLFILAWFKIGHKFTFFTIVAVVLGSFMMHWIQPWQMRLDPLVCAIFGASINGIGTGLALKNGISTGGLDIIGIVIRQKTGISYGKFNIFINLIIIAAAGYMFGWTRALYSALTIFINGRVIDAVYTQHQKMQVMIVTQHPQHIIDGIQNRMHRGITILHDAEGAYSHIENTVLITIIDRYDMYDIRQIVQKADPYAFMSVSEVEKVYGRFKEQEIV
>NZ_CP012890.1|WP_060472298.1|1905067_1906198_+|site-specific-integrase
MASIKKRGKTWYVRFSKRVQEWDPETQSMKPVLKQKSKGGFKTKAEAQQYGIKMEAAAISGVDVTKNPIFADYMQKWFETYKKPNCSPATSTKYNYEINLVRHYFGDLTIKDITRTKYQEFINFTAKKHAPVTVKKLNGSVRACVNSAIIDGLISADFTKQVQVYGNEDRELTVTYLNVDEIKRLTQTTINELDINTPSRHMILTAIFTGARLGEISGLQWSDINFNNNIIDINKSWSWQRKKMGPTKNKSSIRKIKVNDFLLKKISDLKANKCNFVFGNPAENNLPPTSADVNSVLRSLLKDADIDKDIHFHSLRHIHVAYLIKKHVDIVAISQRLGHSNVATTLKYYAYLIDELKKSEDNKIISDLNELSKCYN
>NZ_CP012890.1|WP_060472297.1|1904647_1904869_+|hypothetical-protein
MGLLRNKPPHCPKCKSTNVQAVGQHKKGFSLGKAVVGSVLTGGIGVLAGFAGKKTKKIDMICMNCGNKFKYKP
>NZ_CP012890.1|WP_060472296.1|1904436_1904634_+|hypothetical-protein
MNLSEEDRKIVGEHTNGLIGAAIAMAGIDYTPEEGREGVYMSFYNGPQAIGRSRYTDNTSFKWYK
>NZ_CP012890.1|WP_150121927.1|1903974_1904202_+|hypothetical-protein
MMYFLVGIIDLFFVISLIATIYFGFRARKNKENYQKKFRHSIIATIVLFIFLAGSSQLIPDTSTNNETKSSTSSK
>NZ_CP012890.1|WP_060472294.1|1903496_1903898_+|ImmA/IrrE-family-metallo-endopeptidase
MNELIEYLLNYAFDHGIGYKLVRADSYDPSLSLKKHNLMVINLNWHNQSELPFIIGHEIGHFILGDEGIMYYSSFSGQNSEEKSVDLYSLNLLYDYACSRGQSFEEPGQFIQMYGIPERMTTAAKNLFKHNDN
>NZ_CP012890.1|WP_060472293.1|1903162_1903504_+|helix-turn-helix-transcriptional-regulator
MLLERIKERAKQFDLSLSDVAEKTGISPNTVYSWRVKTPRSDKLKQVAELLHTTVDYLSGLTDDPSLPTDNSFSLDDDKPVMYHGYNVPDKYLDMIRGLMDADIKEGKANKHE
>NZ_CP012890.1|WP_060472292.1|1902708_1902897_-|helix-turn-helix-transcriptional-regulator
MPSTMPGRELVKQFLQQNGIKATDLAKMYGMTKQEVSDYLSGRKVNPASNQFVLKVIRDFKI
>NZ_CP012890.1|WP_060472291.1|1901943_1902693_-|phage-antirepressor-KilAC-domain-containing-protein
MDSNLQLFAFEGSQVRTLEIKNEPWFVGKDVAEILGYSRTADALKAHVDDEDKLTRQFTDSGQSRKMYIINESGLYSLILSSKMPNAKKFKHWVTSEVLPTIRKHGAYMTDEKAFDVIHNKNGLVDLLQQAADQLKQKDIQIAEMKPKALFADAITASETSILVGEMAKILKNGGVNTGQNRFFQWLRENGYLIKRKGTDYNMPTQKSMNLKLFEIKERTIVDGNSTRIVKTPKITGIGQQYFTNLFLS
>NZ_CP012890.1|WP_014563208.1|1914865_1915156_-|CRISPR-associated-endonuclease-Cas2
MMVVVSYDINTESKSGQRRLRHVAKICLDYGQRVQNSVFECKVNSMQLELMKERLLDEIDDSQDSLYFFNLGKNYKNRIKSYGIKEVINLESPVIF
>NZ_CP012890.1|WP_014563207.1|1915165_1916197_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYINTPDSYLSSDGNNVVVKIKNNAVGRLPLQNFEAIVTFGYSGVSPSLMQKCLEQDISISFLSRTGRLKGRVVGEPTGNVYLRKTQFFNSENDAASLLIAKNMIIGKVYNHRWIIERFIRDHGMQIDRDKFKSISENLKNGLKDLQQVDTIDSLRGLEGSLANGYFSVFDDMIINQKDDFFYHGRSRRPPLDRLNALLSFSYSLLANECADALTTNGLDPYEGFMHVDRPGRKSLALDLMEELRGVIADRFVLRLVNKKEIHASDFVCKADGAYLLTDDARKSFLAKWQDNKISELEHPFLKEKIEWGLVPFAQAQLLARYLRGDLDEYPPFMWK
>NZ_CP012890.1|WP_060472301.1|1916193_1916850_-|CRISPR-associated-protein-Cas4
MSYDEKDYLMISGIQHFVFCKRQWALDHIENQWADNYLTVSGNRLHEKADDPYISETRGSKFVVRAMPIHSQEYGLTGIFDVVEFQKDTKGVQVFGKKEKYLPIPVEYKHGKSKIDDSDRLQVLAEAVCLEEMLFCHLDYGYLYYGRTRHREKVKFSEELRTELKKVISEMHYYWEKKYTPKVKVTKKCKSCSLRDICLPELLKRESVSNYISRKLNQ
>NZ_CP012890.1|WP_060472302.1|1916852_1917710_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MVLSNKIDFKVYVAVHGANPNGDPLNGNRPRQTNDGFGEISDVAIKRKIRNRLQDMGHKIFVQSADRTDDGFKSLKDRADSIDAIKKAAKAKDADKYAEVACKNWMDVRSFGQVFAFKGDKLSVSVGVRGPVSIQTARSISPIFINEMQITKSVNSTTGDKKSSDTMGMKYSIDFAVYEFGGSINVQLAEKTGFSDDDAESIHKALETLFENDESSARPAGSMEVLRVYWWKHNSKLGQHSPAEMNRAVEIKNNNEPNAPRSLDDIEFIDKTPEDMKENEQIYEG
>NZ_CP012890.1|WP_012212135.1|1917712_1919686_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MNWISDLAKVYDDNESIAGKAETVSVGKEKTKTVTLVPISHIAVNIPIQINLDKDGGFKGADVIDEKDNQRTIIPATLKSASRSSGSAPMPIDDTLKYIAKDYYPEISNKDKDSHYYSDYINQLKGFVEYVNNKNSSDRVRQQVNAIYTYVSQNDIFADLLFKAHLFGDEIKQVSAIPMKWTGKEEKPAVYKAITGDLDRSFVRFNVRGLGLDRSFEDPDLYEAWGKYYLTTLRNDTGVDYVDCNNDAILTDNHPKGIIPSASNAKLISANDTTNYTFKGRLLNSDEVATIGYLNSQKAHHALRWLIDKQGFSIGGRYYLAWGRKQQNYMIDNQTSPMFKILTSTYNTDQAESYTNERLAKSYYNSLVKGIELNGDNLEDLVYLMQIDTSTPGRADIVSYQALDLNQYIRKLSSWYGKISLFIQNKAGEFVDPPYSLRTIANMIHGSKANDDLKKNTISELISVILGSQIVPRGIIMPLYNKAIRPLSFNPKDPEARFIGWQPIVRLTSKLLKIWYENEGIKAMLNDEINDRSYLYGRLLAVADVLEGDALKNKEVDRPTNAQRYMSAFAQRPADTWKTIYMNAQPYFKQSKGNRRGQILIDHIFDKLQINEENINRLNDPLDGKFLIGYSQQKVDWFRKIREYSEKKQKEQEKGDK
>NZ_CP012890.1|WP_060472303.1|1919685_1920429_-|type-I-C-CRISPR-associated-protein-Cas5
MLDEIIKSPSFSYKVFGDWALFTDPIMRLGGEKFTYSIPTYQALKGITESIYWKPTIVIHIDKVRVMKPILVEAKDMRLFKYNNSRSSDLARYTYLKDVEYQVLAHFEFNMNRLDLAKDRNIKKHLAIMKRCIKRGGRRDVFLGTRECQGYVEPCKFGEGEGYYDNSGDRLFGTMFHGFDYPDETGNSMLKARLWNVVMKKGVVDFIRPEDCPVHKPLHELQVKKFKKGENLESVDQLYSQMLEGDS
>NZ_CP012890.1|WP_060471024.1|1920841_1921891_+|IS30-family-transposase
MDSLHSTMNQHVKGKHLSFEERVIIQTRLKDGCSIRAIARELGCSASTISYEVRRGTVSLYHGKQKRYKADQGQSVYQINRCHCGRKSAFLKKAGFINYVIKHFFEDGWSLDVCANRSLAAGEFSHYQTVCTRTLYNYVDQGLMTIKNYDLPEKLKRNTKLHHVRQNKKKLGRSIEERPKEIEQRSEFGHWECDLVLGHKTKDDQVLLTLSERMSREFLIIRIPDKTSASVMQAFQMLQKQYSEHWNDIFKTITTDNGSEFADLANLEQVSKTLIYYAHPYTSCDKGTVERHNGLIRRFIPKGDCINSYSLQQIIDIETWCNSLPRKILAYHTPDEIFERELDQIYQAA
>NZ_CP012890.1|WP_060472305.1|1926098_1926965_-|homoserine-kinase
MIIKVPASTANLGPGFDSLGMAVSLYLEVEVLNISDRFQVDHVMPDIPHDENNLIVKTALTVYPGLPPLHLQVKSNIPLAHGLGSSSSAIAAGIELANHFGKLNLSDKEKVQIGAKNEGHPDNIAPTILGGLIVGTEIDNHFDTIKAPLPDFSLVAYVPEYNLPTKKSRNVLPAQLDFKTATHGSAIANTLVASLFAQDYQMAGELIEKDVFHEKYREQLVPELLLVREVAHQKHALATYLSGAGSTIMIWIEDEHVKGFLSGLRKHGLKDQTLILKPDNNGVQIIED
>NZ_CP012890.1|WP_060472306.1|1926979_1928209_-|homoserine-dehydrogenase
MTVKIALIGLGTVGSGVLNIIKKNNGKIEQTSGQTIVIKKALVRNLQKYQEFAEKVSLTTDFNEILSDPEIKIVTEVMGGLHPAKEYISEALSAGKNVVTANKDLMAVFGSELIKLAQDNHCDLMYDASVAGGIPILRTLSDSYVGDHILEIQGIVNGTTNYILSQMDEKGLSYAAALKRAQELGFAEADPTNDVTGKDAAYKMILLCQFAFGVHIKLSDFSVQGINHLQGFDLQQAKKLGYTIKLIGIAKKIADQLFIEVAPCLLSNDALMANIKNEINALQIVSENVGTALLTGPGAGSLATANSVMNDIVSEVRNLAHKNTGQLFNRFSNEDSLDITKDVKYPYYLSFAQEKIAHLSQIFDELGIEIQELKQIEDRTIVITKAITRRQLEKMTTTGVKILASYKIL
>NZ_CP012890.1|WP_060472307.1|1928323_1929814_+|threonine-synthase
MKYRSTRGSKENTLNSAAAIIQGLAPDGGLYVPLDFPKANFKLEDLPKLSYKQIAAMGISLFFNDYSKDQIQSAVLNAYSEQWDDRSIVPIEKHDHNFYMELFHGPTLAFKDIALQMLPQLMTRAVQIEKIDRNIIVLTATSGDTGTASMRGFANQKGTSVIVFYPEDGVSPVQLRQMLSQHGDNLQAIAIKGNFDDAQTEVKKIFNDEKFKTLLNKNGYQFSSANSMNIGRLVPQISYYLYTYGQLVRRQEIKLGNEINFSVPTGNFGDILAGYYAKKLGLPIKKLICASNENNVLTDFFKNGEYDRRRKFHLTNAPAMDILVSNNLERLLFDLYDNDYKQISSLMNQLTQRGHYQISDEVHAKLQEIFAADFATERQVIKEINRIYNYNRYVIDPHTAVGSYVAHQYQEKTGDTTPMVIVSTASPYKFPETVYEAVTGRVCPQTGVAAIKKLHEELGGQLSIGVRTLFDRKPGLEKVIDPQNMEIVISSILDLK

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Crispr_ID: NZ_CP012890_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012890_2

2122687-2122847

TypeV

Consensus_repeat	Method
TCCTTTTCTTGGTTAAATTGCGTTATACTTTTCATTGCGTAGGATCTCCTTT	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_CP012890_2

>merge|NZ_CP012890|2|2122687-2122847|CRISPRCasFinder
TCCTTTTCTTGGTTAAATTGCGTTATACTTTTCATTGCGTAGGATCTCCTTTTTACTCAAATCACCTAGACCAATTAACTTAGTAAATGAAGAAATTAAAGATTTAGTATCCTTTTCTTGGTTAAATTGCGTTATACTTTTCATTGTGTAGGATCTCCTTT

>NZ_CP012890|2|2|2122687-2122847|CRISPRCasFinder
TCCTTTTCTTGGTTAAATTGCGTTATACTTTTCATTGCGTAGGATCTCCTTT	TTACTCAAATCACCTAGACCAATTAACTTAGTAAATGAAGAAATTAAAGATTTAGTA
TCCTTTTCTTGGTTAAATTGCGTTATACTTTTCATTGTGTAGGATCTCCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012890.1\|WP_060472442.1\|2128565_2129246_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240377
NZ_CP012890.1\|WP_082990773.1\|2119348_2120518_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340913
NZ_CP012890.1\|WP_060472434.1\|2118464_2118812_-\|SLAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|367400
NZ_CP012890.1\|WP_060472648.1\|2126700_2127321_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|227323
NZ_CP012890.1\|WP_060472444.1\|2131108_2133220_-\|SLAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|367400
NZ_CP012890.1\|WP_054607281.1\|2127434_2127668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_150121930.1\|2118830_2119100_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP012890.1\|WP_150121931.1\|2133774_2134002_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275292
NZ_CP012890.1\|WP_060472440.1\|2123695_2124577_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP012890.1\|WP_060472437.1\|2120731_2121028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472431.1\|2113510_2113744_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_190299886.1\|2119093_2119270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472438.1\|2121141_2121435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472443.1\|2130341_2130554_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472647.1\|2124581_2124908_+\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP012890.1\|WP_060472441.1\|2127711_2128566_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|372824
NZ_CP012890.1\|WP_041808687.1\|2117891_2118425_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472439.1\|2123017_2123680_+\|serine-dehydratase	unknown	unknown	gnl\|CDD\|129802
NZ_CP012890.1\|WP_082990772.1\|2114051_2115281_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP012890.1\|WP_150121929.1\|2115821_2117567_-\|oligopeptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173875

Protein	Function_ID	Function_description	E-value
NZ_CP012890.1\|WP_082990773.1\|2119348_2120518_-\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.18464e-43
NZ_CP012890.1\|WP_060472434.1\|2118464_2118812_-\|SLAP-domain-containing-protein	gnl\|CDD\|367400	pfam03217, SLAP, SLAP domain. This short domain is found in a variety of bacterial cell surface proteins. The domain is about 60 residues in length (although previously defined as 2 copies of this domain). It usually occurs in tandem pairs. It may be distantly related to the SH3 domain.	2.58904e-07
NZ_CP012890.1\|WP_060472444.1\|2131108_2133220_-\|SLAP-domain-containing-protein	gnl\|CDD\|367400	pfam03217, SLAP, SLAP domain. This short domain is found in a variety of bacterial cell surface proteins. The domain is about 60 residues in length (although previously defined as 2 copies of this domain). It usually occurs in tandem pairs. It may be distantly related to the SH3 domain.	7.46089e-14
NZ_CP012890.1\|WP_150121930.1\|2118830_2119100_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.31669e-20
NZ_CP012890.1\|WP_150121931.1\|2133774_2134002_-\|hypothetical-protein	gnl\|CDD\|275292	TIGR04499, abortive_AbiA, abortive infection protein, AbiA family. Members of this protein family average about 650 amino acids in length, with an N-terminal region related to reverse transcriptases. The only characterized member is AbiA, with reported activity as an abortive infection protein for phage defense in Lactococcus lactis and (heterologously) in Streptococcus thermophilus.	4.51917e-10
NZ_CP012890.1\|WP_060472440.1\|2123695_2124577_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	5.81489e-106
NZ_CP012890.1\|WP_060472648.1\|2126700_2127321_+\|C39-family-peptidase	gnl\|CDD\|227323	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown].	1.21636e-29
NZ_CP012890.1\|WP_060472442.1\|2128565_2129246_-\|hypothetical-protein	gnl\|CDD\|240377	PTZ00352, PTZ00352, 60S ribosomal protein L13; Provisional.	0.000201841
NZ_CP012890.1\|WP_060472647.1\|2124581_2124908_+\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	4.47373e-34
NZ_CP012890.1\|WP_060472441.1\|2127711_2128566_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	1.12457e-56
NZ_CP012890.1\|WP_060472439.1\|2123017_2123680_+\|serine-dehydratase	gnl\|CDD\|129802	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit. This enzyme is also called serine deaminase. This model describes the beta chain of an iron-sulfur-dependent L-serine dehydratase, as in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in E. coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.76129e-43
NZ_CP012890.1\|WP_082990772.1\|2114051_2115281_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.07986e-46
NZ_CP012890.1\|WP_150121929.1\|2115821_2117567_-\|oligopeptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173875	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains. This family represents the substrate binding domain of an ATP-binding cassette (ABC)-type oligopeptide import system from Lactococcus lactis and other gram-positive bacteria, as well as its closet homologs from gram-negative bacteria. Oligopeptide-binding protein (OppA) from Lactococcus lactis can bind peptides of length from 4 to at least 35 residues without sequence preference. The oligopeptide import system OppABCDEF is consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and also is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP012890.1|WP_060472438.1|2121141_2121435_-|hypothetical-protein
MTKEKDELKKNLEKVAEEQSGQQAVSYQDLFNPRFMQKNTYFTTIDVFVRELGAKSFPDIEQLGQKVVDNFVKKETNFNSWEEMQQRAVSEYMSSLF
>NZ_CP012890.1|WP_060472437.1|2120731_2121028_-|hypothetical-protein
MTDKEILQKIEQKVKDSENWSVYHHLTDNLGSPAIMLREANTNADRLGVNLDVFKGYAYSFLDNGTPAEPGKPFSVQTLSSLNALTELLDIVKPYIKK
>NZ_CP012890.1|WP_082990773.1|2119348_2120518_-|MFS-transporter
MIGFGLLVNTIGLFFGPISQEFNVGRANVALMMTFQNAAAAIALLFAGKIMEKVNLRWLLTACFALIAVSMLSLTFANSLVHFYLAWTIIGICQPIAITLSIPVLLSKWFNQKLGTVMGISLAFSALGGTIFNPIIAEVIKQFGWRGGFVREAMLIGLILVPLAISINPEPTTQYPAYGKAMRSSKKVALTGLSLKQALKMPVFYAVAFAMLALQFVSGSIYHISGHITNIGISPITAATVVSGVMIGSAIGKISIGYFLDKFNAKLVLAVYSLFGVIGWGGQAMLRESNLLILAAVILGSCQAVCVVALPYLIRRIFGEKDYSNILSVINMIGAFAMSASVYLIGLFFDQTGSYNLGWMINVSAVALSFIVIMITLGKKESANSDFRK
>NZ_CP012890.1|WP_190299886.1|2119093_2119270_-|hypothetical-protein
MLEKQQSIVALDHLKRPKKARPPRNNLMLSLKKNDLELNFYSSLDPDGLNKILSKVLS
>NZ_CP012890.1|WP_150121930.1|2118830_2119100_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MMINPYDLGQVYIICGRTDMRRGIDGLAAIVKDEFDLDPFSGRVFIFCGGKATVTRNQKIKYAGKLTETSRELYYYVGSGAYVKAKDVS
>NZ_CP012890.1|WP_060472434.1|2118464_2118812_-|SLAP-domain-containing-protein
MFLKTNTYVYNKKGQRIKKQGTLRQGTLVTYSGSVNAASSSDDFFFYPSESSNKDPQALKQYKIKGKVYYALGGGRYVKAVNVSKINGQYVFTKQPTYVIPRADMYVLNKDLKET
>NZ_CP012890.1|WP_041808687.1|2117891_2118425_-|hypothetical-protein
MIDTDYTDPQLYVRIAGTKDQFLYWTDAGDYPDEDEGNFSFRFFMDDNHNFAESTQSLVTFKQGLEKTTPLYNDQGQLVDLGGKYLEKAARGNFLPENNYQVDYARYIWVPSEKKAELFYHLIGTTFSMRDPHSKYQYTWVKQNVGSVYVKASDVIFKGLKVKTQNTAEEATKLAEK
>NZ_CP012890.1|WP_150121929.1|2115821_2117567_-|oligopeptide-ABC-transporter-substrate-binding-protein
MKAIKFISTTGLLIGAALSLAACGQNNKNAAKTAKKFPEQTPQKTAKQGGTLTYAIETDTPFKGIFDSQLSVDQVDSDVMQFGNEALFDTDNQYKITNKGPATFKLDKKAKTVTITVKKGVKWSDGKQVIAKDLEYPYEMTANKATNSLLYSDSLANIVGMKAYHNGKAKTISGITYPDGENGRTIVIHFLAMKPGMLQSGNDYFIETASPYHHLKDVPFSKLVSSDQIRKDPLFFGPYKVSKVVRGQSVTWVPNKYYWRGKPKLNKIVAQVVSIKTASQAIKSHKFDIADVVNSDWQAVKTAKDVKFIAKIPLAYSYLGFKVGKWENGKNVMDKNAKMNNKSLRQAIAYAMNINQVEKRYTQGLTFRVPTLIPAQFGDYFDKNAKGFPYNLKKANQLLDKAGYKKKGKWRVQPNGKPLSIHLAAMTGSAVQEPIIQNYIQQWHKIGLHVSLTGGRLIEFNSFYDKLDHDDKNVDMFMAGWSLSSEPSPRGIYSETNPMNDSRFATKENNKLLNEIDSTKAFNHKYRVAAFHKWQQYMNDEAYIVPMTNSYSIQAVNNKIVNYSFKPAAANSVWYKVGYAK
>NZ_CP012890.1|WP_082990772.1|2114051_2115281_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MFDIILKRKEGTNVLKGIKLRLYPNKIQQNQLEQMFGNDRFVWNQMLAMMNELYQNNKALPFLGKFKLNYLLKPLKKEYPFLKNSDSSSLQVVNEFLTQSWKNFFQDKTGQIGKPRFHSRKYLKKSYTGKSIIRITGKRYLKIPKLGYVKTSKTGVLQNTKVKRYTVVLEPTGKYYLSLQAEIPEPEKYSLTDKQVGIDVGVADLAILSNGLKYPSFDSSYFEKKAKVWQRKYARRRHLAKLLVLQDRNKKVLCPRSLESFTNWQKAQKSKAKYQAKAANQRRDYLHKLTTHLVKQYDVIAIEDLKTKNLQKNHHLAKSIANASWRMFRQMLEYKCEWYGKKLIAVDPKNTSRICSKCGYNSGAKPLEIREWICPKCQTKHDRDINAAVNILHKGSTKLSGQGLAMVTS
>NZ_CP012890.1|WP_060472431.1|2113510_2113744_+|hypothetical-protein
MYIYYQIDILVGMIVVAFAIHILRQAINGSSPFIMFNYLFALSISIGGIFIIVASLAAMQPQNWYTSSPLWKILIAS
>NZ_CP012890.1|WP_060472439.1|2123017_2123680_+|serine-dehydratase
MTNRYKSVFDIIGPVMVGPSSSHTAGAVAIGRAGSKLFGGVPRKVTVHYYGSFAQTHRGHGTDYAIAAGILGFDTDDLRVPNAPEIAKKRGIDIRFVEEDGPSPIDHPNTAILDMSSGTKKAQISGCSIGGGSIEIRHLIIHDTAITPTGSLPIIIWLDYEKKILNEQNLTSLLQKKAPFSKKRIFHTKDCNIYEYDVENYLKPTLVKELKKQFENIICL
>NZ_CP012890.1|WP_060472440.1|2123695_2124577_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MYNHIKEIVADSEKQQKPISELIIEQECKLSGLSRQKVWNQMKHNLATMLAAVERGKSGAGVFSKTGLTGGEAVKIKKYRQTHHTLSGDTIMVAVQNAVATNEVNASMGVICATPTAGSSGTLPGVLFLLEKRMDLSEEQMIRSLFTAGGFGLVIANNAELAGATGGCQAEVGSASAMGAAAAVEAAGGSAEQSAQAMSIAMSNLLGLVCDPIAGLVEVPCVKRNAIGAGNALISADMALAGCTSVIPADECIDAMKKVGHQMPASLRETGIGGLAGTPTGQAIKAKIFGKDA
>NZ_CP012890.1|WP_060472647.1|2124581_2124908_+|metal-sulfur-cluster-assembly-factor
MRDGETIKNDIINQLATVIDPELNVDVVNLGLIYEIDLDKDEICLINMTLTTPACPLTGYLIDSITQAVKKVPEVKNVDIEFVWYPVWTPNRMSDVAKKYFNIDEKQD
>NZ_CP012890.1|WP_060472648.1|2126700_2127321_+|C39-family-peptidase
MLKDVRKIPHTKHYSYFDQLGRRRMQNTSTKKASYWINKKGQITGIKNNAKVICQRPQMPTGCEITAVTMMLNFTDKKVSKYQAAKIMPRSSNPNKGFIGSPYKNFPLGFWIAPGGVKPVVQHYLGKSQIMTNCSINAIKQKLLRSHLVVVWVGMFDGISNHAITLTGYHGNTLYYNDPWTGTKRKISVAKFKIHWTLDGHRAISY
>NZ_CP012890.1|WP_054607281.1|2127434_2127668_+|hypothetical-protein
MYIYYQIGIFVGLVFVALAINIFRQARKSGYPSNLVNCIFSITISTAGICIIVASLAAIQPHNWYTSSLLWKILIAG
>NZ_CP012890.1|WP_060472441.1|2127711_2128566_-|DNA/RNA-non-specific-endonuclease
MNKRKTITLFSSFLLLFTLSGCSNTQSSQGTILAKAPKTVIRYNRTAQQKAKKIEAKNYKTEKKIQTLDKKIAKLRKELKKYSGAHAVESVSATKLVNLTYKGQDIITVNNNDPNFSQSDLNTANGAWQRYGNLDGLNRVTAANALLNKSLMPTSQREPLHVNPTGWHNKKIASGWLYNRCHLIGYQLTGQNNNLKNLMTGTRQLNDPDMLRYENEVADYLKESNSNYVRYRVTPVFRGNELLARGVEMEGQSVKSNSVHFNVYIFNVQEGVSLNYATGTSKVG
>NZ_CP012890.1|WP_060472442.1|2128565_2129246_-|hypothetical-protein
MDTLKKVGKVILWIFFWYYLIPYYLLKKYAFKQVKHRVFWSSLSSLVVVFVLFCWWGSTIPDDDSTQAETAKPKIHYVVKKVGRKELAQAKAKEKVLNKEEKKEEAEYEKLSAALAATKAKDKKEKAAKIKAEKKVNEEAKQQNNAVSKSHTSTQTNTSRSHHTTGAAASNHGDMNTAQTGKIVGNHNSKIYHVPVQAGYRMNSANAVYFNSEAEAKAAGYRKSLR
>NZ_CP012890.1|WP_060472443.1|2130341_2130554_+|hypothetical-protein
MKYLSRNQAEQWLNQHKLYGKKRKMFTNKFMKRLSKTCRLVPDKNTLFGKKYSLLELKEYANDINPRSFA
>NZ_CP012890.1|WP_060472444.1|2131108_2133220_-|SLAP-domain-containing-protein
MNRNILITISGATLLSFGLLTGVTNNSEVSAAVKVGQSNRLERNAYIYNSQGHRTKKNVWKHGKKVLVLGTKTIKGKKYAGIGRNQYIRLTNFKKYNTSSKPTALLKHNAYVFDKNGRRIKVASLKKNKTVTILGTRYIKGKKYYQIAKNRFIKAANTTTSIANEVNNSRNDLNQKSTANNTNTTTVTNNNSTSVNSNVDNNAVTGVTNTVNGSTVSSNVTSNSTVSANSNTNSSTTSEKSTDIENNDTDGNSSDLEKGLKVLHTSYIFDKAGKHILGSFVIKGSMVYVKNATLINGKHYYGLVGDDDDSITGYVPATAFDKNATGLEVAVSDKSFIQYKEDIDQLSSGIFNSSAYDLSSPAKKNAYDAAYDVAYKVGNFKYSTDEDMNEAKANLKQAIKDLDGKPVVVEGTYDNYILTSTQKSQILALVNKKYNVTDARFDPDGKYVIYTQDAQRKTIDIWPFIRFENKASFNPLQYMGNQVVKHNSFVYNDKGQRELGEFVSKGDKVRVASYTKINGQIYYSCYNIIGGDAYLTSDNFLPVSVFEENGKDEKFEPASKKEFDDFTKFLRNMNGQVYDHDIFELSSPTARASYQEASGIGSRVANDDRSSQADIEIVEKQMKDAFEKLNGKKIQIKGKRKAHKYTKEEIKQILALIASSRGIKNIEYVGISDDTIEYVVNHKNEQADTRFFVHFSDDDNSWN
>NZ_CP012890.1|WP_150121931.1|2133774_2134002_-|hypothetical-protein
MIEVDKKSYMEAYAYFKTYFDRMTALIVAYVNGESLDVKKYYSKDNLCKVYKELLGKDEKKLRHCQIFCVNKSFS

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Crispr_ID: NZ_CP012890_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012890_3

2157227-2157315

Orphan

Consensus_repeat	Method
TAGTTGTGGTTATCACCGTCGTTGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012890_3

>merge|NZ_CP012890|3|2157227-2157315|CRISPRCasFinder
TAGTTGTGGTTATCACCGTCGTTGCCACTGGCAAAGTTGGCGTGGCACTAGGTGAATTATTAGTAGTTGTGGTTATCACCGTCGTTGCC

>NZ_CP012890|3|3|2157227-2157315|CRISPRCasFinder
TAGTTGTGGTTATCACCGTCGTTGCC	ACTGGCAAAGTTGGCGTGGCACTAGGTGAATTATTAG
TAGTTGTGGTTATCACCGTCGTTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012890.1\|WP_060472460.1\|2151105_2151582_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP012890.1\|WP_060472465.1\|2155709_2156756_-\|fucose-binding-lectin-II	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472458.1\|2148738_2149449_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227064
NZ_CP012890.1\|WP_060472459.1\|2149468_2150518_+\|fucose-binding-lectin-II	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472457.1\|2147066_2148731_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP012890.1\|WP_014563286.1\|2170599_2171007_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP012890.1\|WP_060472470.1\|2164633_2165110_+\|S-ribosylhomocysteine-lyase	unknown	unknown	gnl\|CDD\|179399
NZ_CP012890.1\|WP_060472477.1\|2171025_2172198_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP012890.1\|WP_060472463.1\|2154488_2154734_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472475.1\|2169026_2169812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472476.1\|2169875_2170580_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|381297
NZ_CP012890.1\|WP_060472461.1\|2151753_2152536_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP012890.1\|WP_060472464.1\|2154925_2155675_-\|DUF4430-domain-containing-protein	unknown	unknown	gnl\|CDD\|379618
NZ_CP012890.1\|WP_060472469.1\|2162471_2163569_+\|vitamin-B12-independent-methionine-synthase	unknown	unknown	gnl\|CDD\|180482
NZ_CP012890.1\|WP_060472478.1\|2172387_2173437_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP012890.1\|WP_060472462.1\|2152670_2152991_-\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132886
NZ_CP012890.1\|WP_060472456.1\|2146182_2147079_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP012890.1\|WP_060472467.1\|2160962_2161469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472468.1\|2161515_2161914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012890.1\|WP_060472479.1\|2173494_2174832_-\|SLAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|367400

Protein	Function_ID	Function_description	E-value
NZ_CP012890.1\|WP_060472460.1\|2151105_2151582_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.1286e-31
NZ_CP012890.1\|WP_060472458.1\|2148738_2149449_+\|ECF-transporter-S-component	gnl\|CDD\|227064	COG4720, COG4720, Predicted membrane protein [Function unknown].	2.05546e-06
NZ_CP012890.1\|WP_060472478.1\|2172387_2173437_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	4.91656e-76
NZ_CP012890.1\|WP_014563286.1\|2170599_2171007_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	1.26589e-17
NZ_CP012890.1\|WP_060472470.1\|2164633_2165110_+\|S-ribosylhomocysteine-lyase	gnl\|CDD\|179399	PRK02260, PRK02260, S-ribosylhomocysteine lyase.	1.51083e-93
NZ_CP012890.1\|WP_060472477.1\|2171025_2172198_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.11374e-62
NZ_CP012890.1\|WP_060472476.1\|2169875_2170580_-\|oxidoreductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	2.1025e-16
NZ_CP012890.1\|WP_060472461.1\|2151753_2152536_-\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	7.20917e-67
NZ_CP012890.1\|WP_060472464.1\|2154925_2155675_-\|DUF4430-domain-containing-protein	gnl\|CDD\|379618	pfam14478, DUF4430, Domain of unknown function (DUF4430). Although this family has overlaps with SLBB, the majority of its sequences are unique. Several family members, eg UniProtKB:A0RGA8, that do not overlap have an LPXTG-cell wall anchor at their C-terminus, a SSF_Family 10_polysaccharide_lyase or Glycosyltransferase structure associated with them in the middle region, as shown by InterPro, as well as this domain at the N-terminus.	6.20985e-17
NZ_CP012890.1\|WP_060472469.1\|2162471_2163569_+\|vitamin-B12-independent-methionine-synthase	gnl\|CDD\|180482	PRK06233, PRK06233, vitamin B12 independent methionine synthase.	0
NZ_CP012890.1\|WP_060472462.1\|2152670_2152991_-\|BMC-domain-containing-protein	gnl\|CDD\|132886	cd07046, BMC_PduU-EutS, 1,2-propanediol utilization protein U (PduU)/ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain. PduU encapsulates several related enzymes within a shell composed of a few thousand protein subunits. PduU exists as a hexamer which might further assemble into the flat facets of the polyhedral outer shell of the pdu organelle. This proteinaceous noncarboxysome microcompartment is involved in coenzyme B12-dependent degradation of 1,2-propanediol. The core of PduU is related to the typical BMC domain and its natural oligomeric state is a cyclic hexamer. Unlike other typical BMC domain proteins, the 3D topology of PduU reveals a circular permuted variation on the typical BMC fold which leads to several unique features. The exact functions related to those unique features are still not clear. Another difference is the presence of a deep cavity on one side of the hexamer as well as an intermolecular six-stranded beta barrel that seems to block the central pore that is present in other BMC domain proteins. EutS proteins included in this CD are sequence homologs of PduU. They are encoded within eut operon and may be required for the formation of the outer shell of bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutS might also form hexamers and play similar functional roles in the construction of the eut organelle outer shell at present no experimental evidence directly supports this view.	1.14222e-52
NZ_CP012890.1\|WP_060472456.1\|2146182_2147079_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	3.91563e-08
NZ_CP012890.1\|WP_060472457.1\|2147066_2148731_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	9.37684e-73
NZ_CP012890.1\|WP_060472479.1\|2173494_2174832_-\|SLAP-domain-containing-protein	gnl\|CDD\|367400	pfam03217, SLAP, SLAP domain. This short domain is found in a variety of bacterial cell surface proteins. The domain is about 60 residues in length (although previously defined as 2 copies of this domain). It usually occurs in tandem pairs. It may be distantly related to the SH3 domain.	1.55472e-06

>NZ_CP012890.1|WP_060472465.1|2155709_2156756_-|fucose-binding-lectin-II
MNKYIKSVLTSATLVIAALTFSTTTNAASIRKASTGTIHSRIARTYSYAKKMIKENKTGLSGQSSSIFSKKLNPDTGAAAGYSDFLLGLKGNGYKFNTKEKTLLRKNLVIKKTTPAATMANAVMAVQAMGLNARDYKPYGHKKGINLVTKLYRTSVSKQTTSAQAQVLIAISMSSKFKQPKGAKFSKASLSARLVKAQLNNHGWTYNNQQGVRDADTTSMVLTGLARGKVNTTNVKDSLLKGQKFLTGIVQPSGAFGYTFNGKTTPNANSTAEAIIALSNDFGMKKYVNNTAMKTSQTRTPLYAMLTYVNKSGSIKNAATQLYGVGQVNLAVAAYKAALKNRSVYTIN
>NZ_CP012890.1|WP_060472464.1|2154925_2155675_-|DUF4430-domain-containing-protein
MKKAIGFILAFILTIGIAFGAQQVISSRDAPPKPTASKQVTSSSSSSTSSSHLKQPSHQQKAKGASKAKPKADSRAQKTANKPQTASSQSSTSPNRTTGSSAKASPNKVAKTKRSNAPKSDKLGKINHKAETKVFQDTHHAAKKSSNAKNTIQIHLTVDGYKKVFYSKRMRVKKGANAFSILKQTNLKISYIPGPSVYVNGINGLKENDVKAGSGWMFSVNKKFIDHAANLTKLKSGDNVRWYFTTEGY
>NZ_CP012890.1|WP_060472463.1|2154488_2154734_-|hypothetical-protein
MNQGKVEEVIRNIIAQEVGNNVSQKPVVAGQPSQNDGDISPLLRELRDSVQEKIQTRSSDSEVDSSSLLDDITKDVKNRLG
>NZ_CP012890.1|WP_060472462.1|2152670_2152991_-|BMC-domain-containing-protein
MQEYVPGKQVTLAHIVANPTPDIYEKLGIQTPKDALEILTITPSEAAIIAGDIATKSSNVTLGFIDRFSGSVVIVGEVAEVESALKDVVSKLHDLLGFDIPKITRT
>NZ_CP012890.1|WP_060472461.1|2151753_2152536_-|tyrosine-protein-phosphatase
MRHMQEINLKNAFNCRDLGGYQTRIGLMVQPKQLIRSGYLSDLDNSDQQALYNYGIRTIIDFRSPLEVRKYPDHYDSRTQYLKIPILKQDLTESMTNVRNLAGWLTDKWAGFHQMMRIYDQLIASDEVQRAYRQFFLTLVDANSGGILFHCSTGKDRTGIISILILVMLGVPEEVVKADYLCSNWFSAVRINNRLNEAKLVSDNLAYLKSIFDLSTVREDYFQQAVSMINDRYGSFDSYFHDRLGFDDAFLLRMRKKFLA
>NZ_CP012890.1|WP_060472460.1|2151105_2151582_-|NAD(P)H-dependent-oxidoreductase
MINIGVLVGSLSERSYSQKIANYLMNEYQSVRFVQVNFEILPLYNPDFEKEPPLEWQVFRSVIDQMDALLFVTQEYNLSIPGGLKNAIDVLSVPSPEPHIAYKPALLITDSSGERGGANANIHIQQLLRYIGMTVLNEFITISNVHQRFDPQNRFLNE
>NZ_CP012890.1|WP_060472459.1|2149468_2150518_+|fucose-binding-lectin-II
MKLTSKLIIISASTLLGFGSIAPAFTANAASVKIASRAYQNSKIKANYRYAKNLMIKNKTGLSGKTTALFSKKANPTIGAASGYADLLVGLKGWGYKFTTTQKKRIAANLVINSKSTAADYANAIQGLKAVGLNPTKFKPAGAKKAVNLVSELYRQSMSKQTPNVKSQVLLALTMSSTFKRPSNAKFSKTSLAKSLVKDQQSNNGWAYNNTAASVDSDTTSMAIAALAHSKSSLSAVKTALVKGQSYLKSNITASGAYGYVFNGKTVANANSTAEAIIALSSKQATVKYANGYFTTKQAASPLRAMLGYVNKTGSIKGATSQLIGVGQVNLATAAYRQALKGHSVYTLK
>NZ_CP012890.1|WP_060472458.1|2148738_2149449_+|ECF-transporter-S-component
MKQSSLLNRYRLLIALLLMFIFLLFIVLLKGKHYLLFSFMCLICSLLPSYWRFEHDPISTQTLMFVAVLIALAVATRVPLGAIPGVQGASFVVILSGVSLGPELGFITGSTTALVSNMFMGQGPWTPWQMVAWGLMGLTAGLFMKARLSHSLIFMIVFACVWGYLFGWIMDLWYALAYVSPLTIKSFILAFAASFFPFDTFHAASNAFLIALFYKPWEKLFHRLVTKYNILPDKNQ
>NZ_CP012890.1|WP_060472457.1|2147066_2148731_+|ATP-binding-cassette-domain-containing-protein
MQKLATVTHLTFTYPDQSTPVLDDVNFTIDPGDFIVIAGNTGSGKTTLLNHLKKELMPKGARTGDVQIAETPVADMPKLVSAQTVGYVAQDPQTQSVMATVIEELAFPLENIGCPSNEIERRITELANFLGLDQNLDRQIHQLSGGQLQLVNLASVLILRPKLILLDEPTSQLDPLTAQHFLTVLGRINQELGITIMLTEHRLSTVAAMANRMILLQDHHLTFDGDPRSGLAQMATDAHLTYFVPSIPKLFLDQQIRTSQLPISVADAQSAIRTHHLQFQSVTTGGKVAQLPPAEKPILTVNNISFSFDGQHNVLHHLNLAINPGTWLAIIGKNGSGKSTLLTLICGLMTPQHGKIRFFHQLVWKMAINQRMAKLAFLSQTPRLQFTADTVREELEVQAAELRLPDAKAQVDHMINQFHLNRIEKQNPFDISGGQQQLVGLAITLMATPDLLVLDEPTKGLDPYTKIQVGNLLKQYQQAGMTIVIASHDMEFCAKFADKCTFMFDGHLNTLLATQSFFADNFFFTTPINRIARDQVKDALLPVDLKLANHPERG
>NZ_CP012890.1|WP_060472456.1|2146182_2147079_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MTHTPIKMTFFSQLHPVALTLYFTELIVCLLLFNHVAVAVAEFIALTITAAYYLGGRETARQLKYAVSFLLMILFFNTLLNQKFPPILWHFKWGILTFKFSYPAFLYGIAMAIALIAMLFVFSVLNAVLTPSKLIYVFSPIAPRLAVLVTISFTLVTSFTDRLKRILRLQKTRNVDMVNGSLKTRTQKTLHIFEILLQDALSSAMETANLMDARGFCAAKRTHYRSYHWQFSDLLFITIATVMLVATIGVRILSMGTSRSVANFTTIFTPGDTWPIVVTALLFLLPLISEGVYRSCKN
>NZ_CP012890.1|WP_060472467.1|2160962_2161469_+|hypothetical-protein
MKNYTIDHDMYLMNHKNGDVLKVTVNKEDSVKNLQLYRQDGLGNYYLDKNSRLKKQDNLTTKEDIVKASEKIGGHNTHHIDKWHHQVVPIYNAQHQITGFRPKLALEHHARIQNAKRYLRHLDHHHAIYLSTTSRNTLLKPINYLKDAIYADRNKEMVLAHKIHKLSR
>NZ_CP012890.1|WP_060472468.1|2161515_2161914_-|hypothetical-protein
MTKVLYVNVDLNKIVSGKEIAANTQKFAQVHQDAVIAEKDLDLNSDQVIFHNCPKEYRLVNEVDENFSVEYNKIYVPIQVKYGNIKNFKNDAFDIHEHESIEYFQKWLLCSFLADSLPFNVAARVEAWFGEK
>NZ_CP012890.1|WP_060472469.1|2162471_2163569_+|vitamin-B12-independent-methionine-synthase
MTKLTHYDIVGSFLRPEELKKAREKFNEGNISQAELTHIENQAIDQLIQKEESLGLKFVTDGEFRRSWWHLDFLWNLNGVAKYNYHESYKFQGAKTRTDNVELTGKITYNPDHPFFEAFKFAQKHAKVQVKQTVPSPTLLFRDNRSDNWNKFYDNRRNYLNDLATAYHQTIQHFYDLGCRYLQIDDTTWAFLISKLNETKDNSTEYAKYTSLAEDSVYVINQAIANLPDDLTLATHICRGNFKSTFLFSGGYEPVATYLAQLNYDRFFLEYDSDRAGDLAPIKNIWNNRSNVSIVLGLVTSKSGKLEKKEALIKRINEAIELVPLKNLALSTQCGFASTEEGNILTPEDQWNKIKLVVDTAKQRL
>NZ_CP012890.1|WP_060472470.1|2164633_2165110_+|S-ribosylhomocysteine-lyase
MGKVESFELDHTKVKAPYVRLITVEEGAKGDKISNFDLRLVQPNKNAIPTGGLHTIEHLLAGLLRDRIDGYIDCSPFGCRTGFHLLVWGTPSTTEVAKALKESLEEIRDNIQWKDVPGTTIESCGNYRDHSLFSAKQWSRDILADGISDDPFERHIVE
>NZ_CP012890.1|WP_060472475.1|2169026_2169812_-|hypothetical-protein
MKTKKLFTSIAAAVMLSTSLAGSGAVLSQTAHAANTTQTTTKNSNDKKGTVSVKRRSVTVTINSDKPTLLAVGEDGKSVKPVASTYTKEQTIQVYYSVAFTATAQGSEGQQLPAYYVENKAIDGKETMIFIPAGAVTAATAVPSQADWVKQAESDAKAIQEAYQNRDLKYIVVTPKSKKGAKIYYAYKKTRKSKKVYFKATKKKIKKGKKYKSSMIVKHGKTRYVYIGKKRYVKSSALKMVSAKYAPVKLSDDLKSLIVEN
>NZ_CP012890.1|WP_060472476.1|2169875_2170580_-|oxidoreductase
MALLDEAVVLNDGSLIPKTGIIVKNDDDVTKATKLGYRLLDCAVDDNLKIKDVNPQLYVEVRISKLAKGKELHDNLKSIRANLIADQADLCLLNLSDDNERNNQIWQKLEQLKITGWVKTLGIETDEADALEAILKNIKFKPNVLRLKCEDTDLLTIAKNNKLQVEIPVKGDIAALAEIADKYHTSPMELVLCYFNQKGIIPLVEASEMIENPQVDFNIKSADMATISQLFVKD
>NZ_CP012890.1|WP_014563286.1|2170599_2171007_-|OsmC-family-protein
MGDYLVKTKLENTEWQIANQARDHVFICDADKRSKEDVGPNPVEYLCGSINSCITMSAGMITKVHRLDVKNFHVENYAKTENLGHGKSVVTEMKIKVSFDSSMNREEKEKFIAHALHVSTVYQTLKEAIKIYVEF
>NZ_CP012890.1|WP_060472477.1|2171025_2172198_-|MFS-transporter
MTKKKSIYTKDVILVMAASFFFMFSTMFVNPLINGYAKNLGASSVFAGIIVGIMSIAAMFLRSVAGNLTDKFSKYRLSFIGGILILIGVVGYVLTPSSGWLLLFRLINGTGYVLCTVCMTTWLAFLVPREHVGEAMGFYGLMNALAMALAPALSINIYQKIGYRESLIVAAIAALLMVISIQFVGNHAEPIVKKNQPEKHFKIIQMNVLPVAILTTLFAIPYFITQADIVTYVEQKHLSVAFGSYFLIYAVVLLIIRIGLKRYFDTVRFGVWFWISLISTAAYICLLAIMQNNGEMALAAAGMAMGYGIIYSVLQSTALLLAPVEEQGLASSTFYLGLDIAMSFGPMISGVIDSILPVKWFYVVDLVLIPVMLLVYFVWRKRLNGAIDHH
>NZ_CP012890.1|WP_060472478.1|2172387_2173437_+|IS30-family-transposase
MDSLHSTMNQHIKGKHLSFEERVIIQLRLKDGYSLRAIACELNCSPSTISYEVKRGTVELYHGKVKRYKATQGHDAYQAHRKNCGRKSDFLRKTQFMRYVHKHFFKDGWSLDVCSNRATAVGAFSSRDVVCTKTLYNYVDQGLLDIHNYDLPEKLKRNTKLHRIRKNKKKLGRSIEERPKEINKRNEFGHWECDLVLGHKSKDDEVLLTLSERMSREFLILRIPDKTSVSVMQAFKELQRRYSEHWNDIFKTITTDNGLEFADLSNLEKASNTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGEAIANYSLQDIINIETWCNSLPRKILAYHTPDEIFERELDQIYQAA
>NZ_CP012890.1|WP_060472479.1|2173494_2174832_-|SLAP-domain-containing-protein
MRLGKVIIIFALLGVSTPFLANQTSVVQAAQETQNNTFTLQIASYAYRKDGKQVHLDELRDADGEKATLKQNGQVTLIPKGTVLKYYGKPTPLKTYIGTSSQTSNGDIKMYYSIGNGYYINDKNVGLPNGSANLTIDHNSYVYKYKGQRKKAKTIKKNTTLKVPGKFEEINSPKKFYSEYLSSSGIKFVSWQKRHRFWLKYKTIHGKQYYRIGKNRYIKANNVRYLDGKPIYVDKKETTVVLKSGQKIVNRNSNRESGRYYKKGKKLVVDKYISTFRGYPDDFWFKTGVGDSVFYHVKGTKDDWVWGHVSEVDVKRHIEPVNVFNQDNTTVQAKPGVTKAAIYNSHGEQEYDDKFLKTTNYNQAGYYPIIVKELKYIYVPSSKKVELFYRIKNDDSMQFFVNKEEKGIGSDPRIKDFYVKAEDFEYVAGPKLTPVNTPAEAEKDK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012890_1	1.37\|1914307\|34\|NZ_CP012890\|CRT,PILER-CR	1914307-1914340	34	NZ_CP012890.1	1893551-1893584	0	1.0
NZ_CP012890_1	1.78\|1914307\|33\|NZ_CP012890\|CRISPRCasFinder	1914307-1914339	33	NZ_CP012890.1	1893552-1893584	0	1.0
NZ_CP012890_1	1.41\|1914571\|36\|NZ_CP012890\|CRT,PILER-CR	1914571-1914606	36	NZ_CP012890.1	1892362-1892397	1	0.972
NZ_CP012890_1	1.82\|1914571\|35\|NZ_CP012890\|CRISPRCasFinder	1914571-1914605	35	NZ_CP012890.1	1892363-1892397	1	0.971
NZ_CP012890_1	1.39\|1914439\|34\|NZ_CP012890\|CRT,PILER-CR	1914439-1914472	34	NZ_CP012890.1	1893592-1893625	2	0.941
NZ_CP012890_1	1.53\|1912641\|34\|NZ_CP012890\|CRISPRCasFinder	1912641-1912674	34	NZ_CP012890.1	1867191-1867224	2	0.941

1. spacer 1.37|1914307|34|NZ_CP012890|CRT,PILER-CR matches to position: 1893551-1893584, mismatch: 0, identity: 1.0

ttggaaacgtacacacgagtacaattatcaaata	CRISPR spacer
ttggaaacgtacacacgagtacaattatcaaata	Protospacer
**********************************

2. spacer 1.78|1914307|33|NZ_CP012890|CRISPRCasFinder matches to position: 1893552-1893584, mismatch: 0, identity: 1.0

ttggaaacgtacacacgagtacaattatcaaat	CRISPR spacer
ttggaaacgtacacacgagtacaattatcaaat	Protospacer
*********************************

3. spacer 1.41|1914571|36|NZ_CP012890|CRT,PILER-CR matches to position: 1892362-1892397, mismatch: 1, identity: 0.972

gtctggattcttacatttataaggaggactgttaat	CRISPR spacer
gtctggattcttacatttataaggaggaatgttaat	Protospacer
**************************** *******

4. spacer 1.82|1914571|35|NZ_CP012890|CRISPRCasFinder matches to position: 1892363-1892397, mismatch: 1, identity: 0.971

gtctggattcttacatttataaggaggactgttaa	CRISPR spacer
gtctggattcttacatttataaggaggaatgttaa	Protospacer
**************************** ******

5. spacer 1.39|1914439|34|NZ_CP012890|CRT,PILER-CR matches to position: 1893592-1893625, mismatch: 2, identity: 0.941

acaaaaagtgatggtaatgactccatccattatt	CRISPR spacer
acaaaaagtgatggtaatgactccatcaattgtt	Protospacer
*************************** ***.**

6. spacer 1.53|1912641|34|NZ_CP012890|CRISPRCasFinder matches to position: 1867191-1867224, mismatch: 2, identity: 0.941

tcacaggcaaccgagcctatatcgtcttataatt	CRISPR spacer
tcacaggcaaccgagcctatatcgtgctataatt	Protospacer
************************* .*******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012890_1	1.16\|1912906\|34\|NZ_CP012890\|CRT,PILER-CR	1912906-1912939	34	NC_017468	Lactobacillus helveticus H10 plasmid pH10, complete sequence	10308-10341	0	1.0
NZ_CP012890_1	1.57\|1912906\|33\|NZ_CP012890\|CRISPRCasFinder	1912906-1912938	33	NC_017468	Lactobacillus helveticus H10 plasmid pH10, complete sequence	10309-10341	0	1.0
NZ_CP012890_3	3.1\|2157253\|37\|NZ_CP012890\|CRISPRCasFinder	2157253-2157289	37	NZ_CP029972	Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence	35858-35894	0	1.0
NZ_CP012890_1	1.40\|1914505\|34\|NZ_CP012890\|CRT,PILER-CR	1914505-1914538	34	NC_015603	Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence	14008-14041	1	0.971
NZ_CP012890_1	1.81\|1914505\|33\|NZ_CP012890\|CRISPRCasFinder	1914505-1914537	33	NC_015603	Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence	14009-14041	1	0.97
NZ_CP012890_1	1.4\|1912110\|36\|NZ_CP012890\|CRT,PILER-CR	1912110-1912145	36	NZ_CP012658	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK09, complete sequence	2665-2700	2	0.944
NZ_CP012890_1	1.45\|1912110\|35\|NZ_CP012890\|CRISPRCasFinder	1912110-1912144	35	NZ_CP012658	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK09, complete sequence	2665-2699	2	0.943
NZ_CP012890_1	1.5\|1912178\|34\|NZ_CP012890\|CRT,PILER-CR	1912178-1912211	34	NC_016034	Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-2, complete sequence	604-637	3	0.912
NZ_CP012890_1	1.46\|1912178\|33\|NZ_CP012890\|CRISPRCasFinder	1912178-1912210	33	NC_016034	Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-2, complete sequence	605-637	3	0.909
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NZ_CP023494	Lactobacillus plantarum strain NCIMB 700965 plasmid unamed4, complete sequence	13696-13729	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NZ_CP026508	Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed3, complete sequence	11601-11634	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NZ_CP031181	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_G, complete sequence	3416-3449	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NZ_CP046668	Lactobacillus plantarum strain 83-18 plasmid p83-18.8, complete sequence	54-87	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NC_019219	Lactobacillus plantarum cryptic plasmid pLJ42, complete sequence	3164-3197	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NC_019233	Lactobacillus rennini plasmid pREN, complete sequence	1675-1708	8	0.765
NZ_CP012890_1	1.44\|1912043\|34\|NZ_CP012890\|CRISPRCasFinder	1912043-1912076	34	NC_012550	Lactobacillus brevis plasmid pLB925A03, complete sequence	5925-5958	8	0.765
NZ_CP012890_1	1.43\|1911977\|33\|NZ_CP012890\|CRISPRCasFinder	1911977-1912009	33	NZ_CP026605	Catenovulum sp. CCB-QB4 plasmid unnamed1, complete sequence	154559-154591	9	0.727
NZ_CP012890_1	1.48\|1912310\|33\|NZ_CP012890\|CRISPRCasFinder	1912310-1912342	33	NZ_CP031409	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence	25476-25508	9	0.727
NZ_CP012890_1	1.50\|1912442\|33\|NZ_CP012890\|CRISPRCasFinder	1912442-1912474	33	MK005300	Salmonella phage STG2, complete genome	71788-71820	9	0.727
NZ_CP012890_1	1.63\|1913305\|33\|NZ_CP012890\|CRISPRCasFinder	1913305-1913337	33	MT192033	Chlorobiaceae phage CV-1-33, complete genome	20803-20835	9	0.727
NZ_CP012890_1	1.72\|1913905\|34\|NZ_CP012890\|CRISPRCasFinder	1913905-1913938	34	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	46376-46409	9	0.735
NZ_CP012890_1	1.2\|1911977\|34\|NZ_CP012890\|CRT,PILER-CR	1911977-1912010	34	NZ_CP026605	Catenovulum sp. CCB-QB4 plasmid unnamed1, complete sequence	154558-154591	10	0.706
NZ_CP012890_1	1.7\|1912310\|34\|NZ_CP012890\|CRT,PILER-CR	1912310-1912343	34	NZ_CP031409	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence	25476-25509	10	0.706
NZ_CP012890_1	1.9\|1912442\|34\|NZ_CP012890\|CRT,PILER-CR	1912442-1912475	34	MK005300	Salmonella phage STG2, complete genome	71787-71820	10	0.706
NZ_CP012890_1	1.22\|1913305\|34\|NZ_CP012890\|CRT,PILER-CR	1913305-1913338	34	MT192033	Chlorobiaceae phage CV-1-33, complete genome	20802-20835	10	0.706
NZ_CP012890_1	1.31\|1913905\|35\|NZ_CP012890\|CRT,PILER-CR	1913905-1913939	35	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	46376-46410	10	0.714

1. spacer 1.16|1912906|34|NZ_CP012890|CRT,PILER-CR matches to NC_017468 (Lactobacillus helveticus H10 plasmid pH10, complete sequence) position: , mismatch: 0, identity: 1.0

agcgatgaagacggctggacgatcccttgatgat	CRISPR spacer
agcgatgaagacggctggacgatcccttgatgat	Protospacer
**********************************

2. spacer 1.57|1912906|33|NZ_CP012890|CRISPRCasFinder matches to NC_017468 (Lactobacillus helveticus H10 plasmid pH10, complete sequence) position: , mismatch: 0, identity: 1.0

agcgatgaagacggctggacgatcccttgatga	CRISPR spacer
agcgatgaagacggctggacgatcccttgatga	Protospacer
*********************************

3. spacer 3.1|2157253|37|NZ_CP012890|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 0, identity: 1.0

actggcaaagttggcgtggcactaggtgaattattag	CRISPR spacer
actggcaaagttggcgtggcactaggtgaattattag	Protospacer
*************************************

4. spacer 1.40|1914505|34|NZ_CP012890|CRT,PILER-CR matches to NC_015603 (Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence) position: , mismatch: 1, identity: 0.971

tccaaacgtgataacggtatcgggcggtaagagt	CRISPR spacer
tccaaacgtgataacagtatcgggcggtaagagt	Protospacer
***************.******************

5. spacer 1.81|1914505|33|NZ_CP012890|CRISPRCasFinder matches to NC_015603 (Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence) position: , mismatch: 1, identity: 0.97

tccaaacgtgataacggtatcgggcggtaagag	CRISPR spacer
tccaaacgtgataacagtatcgggcggtaagag	Protospacer
***************.*****************

6. spacer 1.4|1912110|36|NZ_CP012890|CRT,PILER-CR matches to NZ_CP012658 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK09, complete sequence) position: , mismatch: 2, identity: 0.944

cagcaagctgaccttgcccgccaacaagccaagttt	CRISPR spacer
cagcaagctgatcttgcccgccaacaagccgagttt	Protospacer
***********.******************.*****

7. spacer 1.45|1912110|35|NZ_CP012890|CRISPRCasFinder matches to NZ_CP012658 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK09, complete sequence) position: , mismatch: 2, identity: 0.943

cagcaagctgaccttgcccgccaacaagccaagtt	CRISPR spacer
cagcaagctgatcttgcccgccaacaagccgagtt	Protospacer
***********.******************.****

8. spacer 1.5|1912178|34|NZ_CP012890|CRT,PILER-CR matches to NC_016034 (Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-2, complete sequence) position: , mismatch: 3, identity: 0.912

agacaattttccaaatcaaaaccaccaaatgtct	CRISPR spacer
agacaattttccaaatcaaaaccgccaaacgttt	Protospacer
***********************.*****.**.*

9. spacer 1.46|1912178|33|NZ_CP012890|CRISPRCasFinder matches to NC_016034 (Lactobacillus buchneri subsp. silagei CD034 plasmid pCD034-2, complete sequence) position: , mismatch: 3, identity: 0.909

agacaattttccaaatcaaaaccaccaaatgtc	CRISPR spacer
agacaattttccaaatcaaaaccgccaaacgtt	Protospacer
***********************.*****.**.

10. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP023494 (Lactobacillus plantarum strain NCIMB 700965 plasmid unamed4, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

11. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP026508 (Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed3, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

12. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP031181 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_G, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagtttctcgcattcaagttcatttaga	Protospacer
.* *  **********.*************.*.

13. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP046668 (Lactobacillus plantarum strain 83-18 plasmid p83-18.8, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

14. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NC_019219 (Lactobacillus plantarum cryptic plasmid pLJ42, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

15. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NC_019233 (Lactobacillus rennini plasmid pREN, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

16. spacer 1.44|1912043|34|NZ_CP012890|CRISPRCasFinder matches to NC_012550 (Lactobacillus brevis plasmid pLB925A03, complete sequence) position: , mismatch: 8, identity: 0.765

tttttttagtttctcgtattcaagttcattcaat	CRISPR spacer
ctgtgatagcttctcgtattcaagttcatttaga	Protospacer
.* *  ***.********************.*.

17. spacer 1.43|1911977|33|NZ_CP012890|CRISPRCasFinder matches to NZ_CP026605 (Catenovulum sp. CCB-QB4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

tctgcttctggtagtttgattccttttgttctt	CRISPR spacer
aattcttctggtactttgatgccttttgctacg	Protospacer
  * ********* ****** *******.* .

18. spacer 1.48|1912310|33|NZ_CP012890|CRISPRCasFinder matches to NZ_CP031409 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence) position: , mismatch: 9, identity: 0.727

gccattgtcgttcgcattcgcaaactccgaagc	CRISPR spacer
cgcattatcattcgcattcgcaaactttccatc	Protospacer
  ****.**.****************..  * *

19. spacer 1.50|1912442|33|NZ_CP012890|CRISPRCasFinder matches to MK005300 (Salmonella phage STG2, complete genome) position: , mismatch: 9, identity: 0.727

tacttttctggattatttctatgccataaatat	CRISPR spacer
agattacttggcttatttttatgccataaatac	Protospacer
 . ** ..*** ******.*************.

20. spacer 1.63|1913305|33|NZ_CP012890|CRISPRCasFinder matches to MT192033 (Chlorobiaceae phage CV-1-33, complete genome) position: , mismatch: 9, identity: 0.727

tagtgtgattgcacaagttttggcaggtggcat	CRISPR spacer
gcaagtgattgcacaaggtttggcaggaggtca	Protospacer
  . ************* ********* **.

21. spacer 1.72|1913905|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaatagtaatggcaagattgattttaaggtc	CRISPR spacer
tagtaatagtaatagcaatattgattttaataaa	Protospacer
 *. *********.**** *********** .

22. spacer 1.2|1911977|34|NZ_CP012890|CRT,PILER-CR matches to NZ_CP026605 (Catenovulum sp. CCB-QB4 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

tctgcttctggtagtttgattccttttgttcttt	CRISPR spacer
aattcttctggtactttgatgccttttgctacgg	Protospacer
  * ********* ****** *******.* .

23. spacer 1.7|1912310|34|NZ_CP012890|CRT,PILER-CR matches to NZ_CP031409 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence) position: , mismatch: 10, identity: 0.706

gccattgtcgttcgcattcgcaaactccgaagca	CRISPR spacer
cgcattatcattcgcattcgcaaactttccatct	Protospacer
  ****.**.****************..  * *

24. spacer 1.9|1912442|34|NZ_CP012890|CRT,PILER-CR matches to MK005300 (Salmonella phage STG2, complete genome) position: , mismatch: 10, identity: 0.706

tacttttctggattatttctatgccataaatatt	CRISPR spacer
agattacttggcttatttttatgccataaataca	Protospacer
 . ** ..*** ******.*************.

25. spacer 1.22|1913305|34|NZ_CP012890|CRT,PILER-CR matches to MT192033 (Chlorobiaceae phage CV-1-33, complete genome) position: , mismatch: 10, identity: 0.706

tagtgtgattgcacaagttttggcaggtggcatt	CRISPR spacer
gcaagtgattgcacaaggtttggcaggaggtcag	Protospacer
  . ************* ********* **.

26. spacer 1.31|1913905|35|NZ_CP012890|CRT,PILER-CR matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

gaaaaatagtaatggcaagattgattttaaggtca	CRISPR spacer
tagtaatagtaatagcaatattgattttaataaag	Protospacer
 *. *********.**** *********** .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8393 : 96652

Streptococcus_phage(13.64%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082990784.1\|8393_9698_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.2e-45	48.1
WP_190299890.1\|9759_10101_-	hypothetical protein	NA	NA	NA	NA
WP_060470998.1\|10180_10999_-	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_060470999.1\|11009_11807_-	alpha/beta hydrolase	A0A0Y0ADV3	Mycobacterium_phage	1.5e-12	34.4
WP_060472572.1\|12654_12846_-\|transposase	transposase	NA	NA	NA	NA
WP_060471001.1\|13076_14354_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060472573.1\|14364_14646_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_060471002.1\|14922_15762_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	2.5e-50	38.0
WP_060471003.1\|15905_16391_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_082990669.1\|17301_18093_-	recombinase family protein	Q2A092	Sodalis_phage	1.0e-10	32.5
WP_060471006.1\|18404_19985_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	1.3e-20	26.4
WP_060471007.1\|19971_20520_-	ATP-binding cassette domain-containing protein	A0A076FI99	Aureococcus_anophage	1.8e-14	34.9
WP_060471008.1\|20669_21254_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_060471009.1\|21378_22428_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	7.8e-46	34.0
WP_060471011.1\|22763_23441_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	2.0e-18	32.9
WP_060471012.1\|23456_24506_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	9.9e-49	36.0
WP_060471013.1\|24588_25506_-	ATP-binding cassette domain-containing protein	A0A2I4R674	Erysipelothrix_phage	2.0e-13	31.7
WP_060471014.1\|25693_27100_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471015.1\|32142_33321_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060471016.1\|34226_34565_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_013851202.1\|34558_34810_-	hypothetical protein	NA	NA	NA	NA
WP_060471017.1\|37948_40054_-	putative ornithine decarboxylase	NA	NA	NA	NA
WP_060471018.1\|40278_41730_+	APC family permease	NA	NA	NA	NA
WP_060471019.1\|41984_42539_-	hypothetical protein	NA	NA	NA	NA
WP_060471020.1\|42708_43224_-	NUDIX hydrolase	NA	NA	NA	NA
WP_012212177.1\|43297_44209_-	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA
WP_012212178.1\|44319_46005_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	6.0e-72	31.4
WP_060472574.1\|47411_47999_+	phenolic acid decarboxylase	NA	NA	NA	NA
WP_060471021.1\|48591_49269_-	L,D-transpeptidase	NA	NA	NA	NA
WP_060471022.1\|49394_50243_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_060471023.1\|50244_51540_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.0e-16	27.5
WP_060471024.1\|51961_53011_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3
WP_060471025.1\|53031_53346_+	PspC domain-containing protein	NA	NA	NA	NA
WP_060471027.1\|56116_56932_-	sugar-phosphatase	NA	NA	NA	NA
WP_060471028.1\|57105_57444_+	hypothetical protein	NA	NA	NA	NA
WP_150121869.1\|58128_59076_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	6.3e-79	48.6
WP_060471030.1\|59166_59817_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_060471031.1\|59806_60139_-	thioredoxin family protein	NA	NA	NA	NA
WP_014918364.1\|60125_60278_-	hypothetical protein	NA	NA	NA	NA
WP_060471032.1\|61973_62804_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_060471034.1\|66058_67705_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_190299903.1\|67798_70216_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.8
WP_060471036.1\|70501_71164_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_060471001.1\|71592_72870_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060471037.1\|73784_75245_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	8.7e-27	27.4
WP_060471038.1\|75262_76462_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.1e-141	67.3
WP_060471039.1\|83766_84225_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.0e-42	56.8
WP_060471040.1\|84237_86577_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.1e-83	35.7
WP_060471041.1\|86651_86885_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_060471042.1\|86951_89012_-	LTA synthase family protein	W6LM83	Streptococcus_phage	8.8e-142	45.7
WP_060471043.1\|89083_90109_-	flippase-like domain-containing protein	NA	NA	NA	NA
WP_060471044.1\|90108_91152_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_060471045.1\|91165_92329_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_082990672.1\|95404_96652_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

119710 : 174736

Streptococcus_phage(19.05%)

tRNA,integrase,transposase

attL 116353:116412|attR 166068:166469

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
116353:116412	attL	NA	NA	NA	NA
WP_060471062.1\|119710_121117_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471063.1\|121256_123614_-	endonuclease MutS2	Q94M10	Lactobacillus_phage	9.7e-20	48.7
WP_003627751.1\|123677_123989_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_060471064.1\|123991_124420_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_003627753.1\|124419_124677_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_060471065.1\|124737_127377_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	2.7e-63	33.3
WP_060471066.1\|127646_128132_-	hypothetical protein	NA	NA	NA	NA
WP_060471067.1\|128700_130062_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	7.5e-49	32.4
WP_060471068.1\|130054_131011_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_060471069.1\|131070_132192_-	DNA polymerase IV	O64031	Bacillus_phage	2.8e-17	24.3
WP_060471070.1\|132184_133636_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	4.5e-60	32.0
WP_060471071.1\|133743_134169_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_060471072.1\|134227_135244_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	4.3e-09	32.5
WP_060471073.1\|135292_135883_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_060471074.1\|135907_137818_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	4.0e-56	30.0
WP_060471075.1\|137817_140415_-	DNA mismatch repair protein MutS	F2QAF7	Pyramimonas_orientalis_virus	1.3e-38	24.8
WP_060471076.1\|140577_142212_-	chaperonin GroEL	A0A219YK78	uncultured_virus	1.0e-156	55.7
WP_060471077.1\|142264_142549_-	co-chaperone GroES	A0A221S465	uncultured_virus	9.9e-12	37.6
WP_060471078.1\|142781_143933_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	2.4e-56	36.2
WP_065214082.1\|144259_145279_-	helix-turn-helix transcriptional regulator	L0P7E1	Lactobacillus_phage	3.1e-23	60.7
WP_060471079.1\|145399_145618_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_060471080.1\|145618_146041_+	hypothetical protein	NA	NA	NA	NA
WP_060471081.1\|146043_146346_+	hypothetical protein	NA	NA	NA	NA
WP_082990674.1\|146366_146942_+	hypothetical protein	NA	NA	NA	NA
WP_060471082.1\|146957_147278_+	hypothetical protein	NA	NA	NA	NA
WP_190299891.1\|147396_148782_+	conserved phage C-terminal domain-containing protein	NA	NA	NA	NA
WP_060471084.1\|150241_150772_-	hypothetical protein	NA	NA	NA	NA
WP_060471085.1\|151038_151224_+	hypothetical protein	NA	NA	NA	NA
WP_060471086.1\|151304_151598_-	hypothetical protein	NA	NA	NA	NA
WP_060471087.1\|152704_153982_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.2e-10	20.6
WP_082990676.1\|154892_156122_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	1.5e-64	38.1
WP_080741353.1\|156695_156983_-	GH32 C-terminal domain-containing protein	NA	NA	NA	NA
WP_060471090.1\|157949_159179_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	5.6e-11	22.9
WP_060471091.1\|159386_160793_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471092.1\|160913_161660_-	hypothetical protein	NA	NA	NA	NA
WP_060471093.1\|161659_162115_-	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_060471094.1\|162254_162902_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_060471095.1\|163075_164989_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.5e-60	31.8
WP_082990677.1\|166413_167679_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.1e-12	23.7
166068:166469	attR	NA	NA	NA	NA
WP_060471097.1\|167919_169068_+\|transposase	IS110 family transposase	A0A1X9I5Z0	Streptococcus_phage	1.3e-54	38.6
WP_060471098.1\|169496_170699_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.3e-40	29.8
WP_060471099.1\|170976_172026_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-51	35.2
WP_082990678.1\|172215_173475_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.5e-125	58.5
WP_060471101.1\|173998_174736_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA

DBSCAN-SWA_3

407197 : 452368

Planktothrix_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471197.1\|407197_408376_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060471282.1\|408806_410213_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471283.1\|410467_413485_+	alpha-glucosidase	NA	NA	NA	NA
WP_060471284.1\|414748_415534_-	YibE/F family protein	NA	NA	NA	NA
WP_060471285.1\|415530_416664_-	YibE/F family protein	NA	NA	NA	NA
WP_060471286.1\|416768_417509_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_060471287.1\|417536_418619_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_060471288.1\|418773_420015_+	CAP domain-containing protein	NA	NA	NA	NA
WP_190299907.1\|420046_420778_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-32	40.6
WP_060471290.1\|420779_422264_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_060471291.1\|422391_423216_-	hypothetical protein	NA	NA	NA	NA
WP_060471292.1\|423228_423912_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_060471293.1\|424061_425048_-	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	4.2e-33	30.3
WP_060471294.1\|425254_425674_-	hypothetical protein	NA	NA	NA	NA
WP_060471295.1\|425676_426315_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_060471296.1\|426332_426989_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471297.1\|427000_427816_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_060471298.1\|427977_428922_+	DUF1002 domain-containing protein	NA	NA	NA	NA
WP_082990788.1\|429076_430381_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.2e-45	48.7
WP_060471299.1\|430451_431210_-	viroplasmin family protein	C1KFJ1	Lactobacillus_virus	2.0e-27	32.7
WP_060471300.1\|431298_432225_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471301.1\|432244_433702_+	cardiolipin synthase	NA	NA	NA	NA
WP_060471302.1\|433696_434176_-	hypothetical protein	NA	NA	NA	NA
WP_060471303.1\|434228_434936_+	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_060471304.1\|435497_436286_+	DUF475 domain-containing protein	A0A068EP98	Bacillus_phage	5.0e-37	40.4
WP_060471305.1\|436322_436685_-	DUF488 family protein	NA	NA	NA	NA
WP_060471306.1\|436754_437387_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_060471307.1\|437714_439328_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_060471308.1\|439327_440083_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-27	36.7
WP_060471309.1\|440135_441053_-	HNH endonuclease	NA	NA	NA	NA
WP_014918082.1\|441053_441701_-	HD domain-containing protein	NA	NA	NA	NA
WP_190299893.1\|441863_442025_+	hypothetical protein	NA	NA	NA	NA
WP_025283179.1\|442071_442398_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_060471310.1\|442449_443559_-	beta-glucanase	NA	NA	NA	NA
WP_082990689.1\|443473_444880_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_150121880.1\|445976_446117_-	hypothetical protein	NA	NA	NA	NA
WP_060471313.1\|447633_448485_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060472587.1\|448704_449415_+	hypothetical protein	NA	NA	NA	NA
WP_060472588.1\|449419_449986_+	hypothetical protein	NA	NA	NA	NA
WP_060471001.1\|450163_451441_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_150121881.1\|451567_452368_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

468441 : 540998

Streptococcus_phage(20.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471326.1\|468441_469299_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471327.1\|469627_470032_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_060471328.1\|470212_471319_+	cation transporter	NA	NA	NA	NA
WP_060471329.1\|471386_471947_+	LemA family protein	A0A1X9IGG1	Lactococcus_phage	1.2e-13	33.7
WP_060471330.1\|471961_472858_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_060471331.1\|472975_474253_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.8e-11	20.7
WP_150121883.1\|474490_475138_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	6.5e-27	40.0
WP_060471332.1\|476216_477158_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060472589.1\|477928_478408_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_060471333.1\|478877_480119_-	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	6.2e-18	28.9
WP_060471334.1\|480205_481003_-	MBL fold metallo-hydrolase	A0A2I7SDH3	Paenibacillus_phage	2.7e-30	34.1
WP_060471335.1\|481018_481843_-	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_060471336.1\|481845_483195_-	hypothetical protein	NA	NA	NA	NA
WP_060471337.1\|483184_485041_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	2.3e-32	31.6
WP_060471338.1\|485107_485824_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.0e-41	39.2
WP_060471339.1\|486145_486367_+	hypothetical protein	NA	NA	NA	NA
WP_060471340.1\|486551_487958_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471197.1\|488471_489650_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060471341.1\|489827_491105_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.7e-10	24.4
WP_060471098.1\|491244_492447_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.3e-40	29.8
WP_190299896.1\|492817_492961_+	hypothetical protein	NA	NA	NA	NA
WP_060471342.1\|492968_493388_+	hypothetical protein	NA	NA	NA	NA
WP_060471343.1\|493604_494882_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.4e-12	21.5
WP_060471344.1\|510414_510828_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.3e-09	40.4
WP_082990691.1\|511114_512125_+	serine hydrolase	NA	NA	NA	NA
WP_060472590.1\|512164_514996_-	DEAD/DEAH box helicase	A0A2I7SC38	Paenibacillus_phage	8.1e-29	25.1
WP_060471346.1\|516485_517313_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.0e-96	63.1
WP_060471347.1\|517785_518628_-	fructosamine kinase family protein	NA	NA	NA	NA
WP_060471348.1\|518754_519768_+	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	5.0e-50	35.3
WP_060471349.1\|520069_520927_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.3e-58	42.0
WP_060472591.1\|521800_522508_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_060471350.1\|522847_523840_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_060471351.1\|523836_524733_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_060471352.1\|524729_525491_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.5e-17	29.4
WP_060471354.1\|528791_529958_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.8e-99	47.2
WP_060471355.1\|529970_531047_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.1e-92	47.1
WP_060471356.1\|531447_532077_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_060471357.1\|533342_533915_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_060471358.1\|533911_534946_-	AI-2E family transporter	NA	NA	NA	NA
WP_060471359.1\|535200_537435_+	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	A0A222ZQ84	Mycobacterium_phage	6.5e-90	33.4
WP_060471360.1\|538372_538933_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_060471361.1\|538971_539745_-	putative ABC transporter permease	NA	NA	NA	NA
WP_060471024.1\|539948_540998_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3

DBSCAN-SWA_5

562471 : 702153

105

Streptococcus_phage(15.62%)

protease,transposase,holin,integrase,tRNA

attL 561334:561360|attR 640424:640450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
561334:561360	attL	NA	NA	NA	NA
WP_023191461.1\|562471_563710_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003624850.1\|563753_563933_-	DNA-binding protein	NA	NA	NA	NA
WP_004561176.1\|563934_564318_-	hypothetical protein	NA	NA	NA	NA
WP_060471377.1\|565226_566021_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	2.7e-14	28.5
WP_060471378.1\|566010_566562_-	hypothetical protein	NA	NA	NA	NA
WP_060471379.1\|566578_567016_-	hypothetical protein	NA	NA	NA	NA
WP_060471380.1\|567196_567913_+	helix-turn-helix transcriptional regulator	Q9AZN3	Lactococcus_phage	3.7e-07	47.1
WP_082990787.1\|568236_569502_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471381.1\|569821_570526_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	2.1e-18	42.9
WP_060471382.1\|570609_571839_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_060471383.1\|571900_572161_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_065214089.1\|572211_572382_-	CsbD family protein	NA	NA	NA	NA
WP_060471282.1\|572532_573939_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471385.1\|574695_575943_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	7.4e-11	22.2
WP_082990676.1\|576180_577410_+\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	1.5e-64	38.1
WP_060471386.1\|577505_578363_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471387.1\|578659_579589_-	DegV family protein	NA	NA	NA	NA
WP_060471388.1\|579679_580609_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_060471389.1\|580845_582240_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.7e-120	50.1
WP_060471390.1\|582270_582726_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_060471391.1\|582737_584759_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_060471392.1\|584966_585824_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_172644354.1\|586044_587646_+	ATP-binding cassette domain-containing protein	F2Y1V5	Organic_Lake_phycodnavirus	4.9e-15	32.2
WP_060471393.1\|589271_589508_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_060471394.1\|589536_590055_-	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	9.2e-40	51.2
WP_060471395.1\|590100_590397_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_060471396.1\|590616_593100_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.4e-109	34.1
WP_060471397.1\|593110_595075_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.9e-142	46.2
WP_060471398.1\|595075_596203_-	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_060471399.1\|596202_596427_-	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	3.2e-05	47.2
WP_060471400.1\|596652_597783_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	3.1e-24	26.5
WP_060471401.1\|597947_599315_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_003549412.1\|599790_599931_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_003624919.1\|599983_600352_+	ribonuclease P protein component	NA	NA	NA	NA
WP_060471402.1\|600332_601229_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_060471403.1\|601338_602724_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_060471404.1\|602732_604631_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_060471405.1\|606880_608284_+	NADP-dependent phosphogluconate dehydrogenase	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	4.1e-34	26.9
WP_060471406.1\|608384_609944_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_060471407.1\|610037_611147_+	hypothetical protein	NA	NA	NA	NA
WP_003624933.1\|611211_611364_+	hypothetical protein	NA	NA	NA	NA
WP_060471408.1\|614332_616255_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.4e-93	37.3
WP_060471409.1\|616254_616542_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_060471410.1\|616545_616851_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_060471409.1\|616850_617138_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_060471411.1\|617137_617515_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_060471412.1\|617527_617968_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_060471413.1\|618099_618957_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_150121940.1\|623505_623592_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_060471414.1\|626203_627553_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-124	50.6
WP_060471415.1\|627692_628970_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	4.5e-11	23.5
WP_060471001.1\|629197_630475_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_150121888.1\|630940_631042_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060471416.1\|631096_631543_+	hypothetical protein	NA	NA	NA	NA
WP_082990787.1\|631879_633145_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471392.1\|633216_634074_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_150121941.1\|634736_634823_+	hypothetical protein	NA	NA	NA	NA
WP_060471417.1\|637908_638796_-	GRP family sugar transporter	NA	NA	NA	NA
WP_060471419.1\|640565_641879_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	1.3e-34	30.0
640424:640450	attR	NA	NA	NA	NA
WP_060471420.1\|643428_644268_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_060471421.1\|644264_645452_-	MFS transporter	NA	NA	NA	NA
WP_060471422.1\|645636_647043_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471423.1\|647283_648594_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	3.5e-43	30.9
WP_060471424.1\|648773_649508_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_060471425.1\|649646_650846_+	ATP-binding protein	NA	NA	NA	NA
WP_082990791.1\|650901_652167_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471426.1\|653793_654594_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_060471427.1\|654641_655328_-	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	1.2e-55	52.2
WP_060471428.1\|655352_656000_-	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	2.3e-48	48.4
WP_060471429.1\|656512_657232_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_060471430.1\|657349_658177_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	3.3e-23	28.1
WP_060471431.1\|659128_659734_+	ECF transporter S component	NA	NA	NA	NA
WP_060471432.1\|662132_663236_-	YdcF family protein	NA	NA	NA	NA
WP_060471433.1\|663324_663981_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_150121889.1\|664179_664278_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_150121890.1\|665015_665111_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_060471434.1\|665264_665546_-	hypothetical protein	NA	NA	NA	NA
WP_060471435.1\|665542_666400_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060471436.1\|666491_667121_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_060471437.1\|667125_668694_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.6e-10	30.5
WP_004561119.1\|668731_669001_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_060471438.1\|668987_669296_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_060471439.1\|669424_670594_-	cation:proton antiporter	NA	NA	NA	NA
WP_060471440.1\|670747_672604_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	8.9e-69	30.5
WP_060471441.1\|672736_673207_-	CBS domain-containing protein	NA	NA	NA	NA
WP_060471442.1\|673782_674919_+	hypothetical protein	NA	NA	NA	NA
WP_003630630.1\|675388_675541_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_060471443.1\|675556_677074_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	1.5e-34	28.6
WP_060471444.1\|677070_678309_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	5.8e-24	27.2
WP_060471445.1\|678367_678607_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_060471446.1\|678599_679886_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_060471447.1\|679885_680830_+	serine hydrolase	NA	NA	NA	NA
WP_082990699.1\|681041_681593_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_060471448.1\|681940_682330_+	hypothetical protein	NA	NA	NA	NA
WP_060471449.1\|683426_684704_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.9e-11	21.4
WP_060471450.1\|684928_685585_+	DUF975 family protein	NA	NA	NA	NA
WP_060471451.1\|685650_686613_-	SLAP domain-containing protein	Q6SE63	Lactobacillus_prophage	1.0e-63	53.8
WP_082990700.1\|686887_688504_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_014919612.1\|688542_688779_-	hypothetical protein	NA	NA	NA	NA
WP_060471453.1\|691840_693166_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_060471454.1\|693134_694004_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471455.1\|694347_696471_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	4.2e-115	40.2
WP_060471456.1\|696578_697220_+	signal peptidase I	NA	NA	NA	NA
WP_060471457.1\|697313_698051_+	hypothetical protein	NA	NA	NA	NA
WP_079227714.1\|702000_702153_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

708678 : 735749

Lysinibacillus_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471459.1\|708678_709956_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.3e-10	20.8
WP_060471460.1\|710263_711313_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3
WP_060471461.1\|711346_712360_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.2e-62	41.8
WP_060471462.1\|712793_713849_+	DUF871 domain-containing protein	NA	NA	NA	NA
WP_060471463.1\|714285_715278_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	3.7e-130	67.0
WP_060471464.1\|715475_716765_+	adenylosuccinate synthase	A0A285PX35	Cedratvirus	8.1e-69	35.8
WP_060471465.1\|716768_718067_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	5.0e-18	33.1
WP_060471466.1\|718135_718498_+	hypothetical protein	NA	NA	NA	NA
WP_060471467.1\|718533_719574_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.6e-37	30.4
WP_060471468.1\|720488_721133_+	hypothetical protein	NA	NA	NA	NA
WP_060471469.1\|722329_722812_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	8.3e-19	44.1
WP_082990791.1\|722879_724145_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471470.1\|724352_725039_-	cobalamin biosynthesis protein CobQ	NA	NA	NA	NA
WP_060471471.1\|725321_726134_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_082990703.1\|726536_727796_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.0e-116	55.9
WP_060471473.1\|729147_729921_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_150121942.1\|729951_730095_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_082990704.1\|730095_730449_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_150121943.1\|730717_731725_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A160DHK0	Gordonia_phage	1.0e-95	53.7
WP_003648207.1\|731705_732131_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	J9PTY0	Bacillus_phage	1.1e-11	38.3
WP_060471475.1\|732123_734292_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A0D3MSW9	Lactococcus_phage	4.2e-171	47.5
WP_060471476.1\|734471_735749_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.8e-11	20.8

DBSCAN-SWA_7

802362 : 933287

106

Lactobacillus_phage(12.9%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_190299899.1\|802362_803592_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	6.4e-116	55.6
WP_060471524.1\|803767_804304_+	hypothetical protein	NA	NA	NA	NA
WP_060471525.1\|805286_805901_+	hypothetical protein	NA	NA	NA	NA
WP_060471526.1\|805955_807461_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_060471527.1\|807553_807853_-	DUF2187 domain-containing protein	NA	NA	NA	NA
WP_060471528.1\|807947_808493_+	guanylate kinase	A0A0K2FM14	Brevibacillus_phage	3.6e-10	28.9
WP_060471529.1\|808682_809234_+	C40 family peptidase	X5JAJ3	Clostridium_phage	3.2e-14	33.9
WP_060471530.1\|809798_810512_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	2.1e-18	47.2
WP_060471531.1\|810649_811534_+	C40 family peptidase	M9MUG9	Rhodococcus_phage	8.7e-14	37.8
WP_060471532.1\|813223_814237_-	hypothetical protein	NA	NA	NA	NA
WP_060471533.1\|814258_815524_-	GTPase HflX	NA	NA	NA	NA
WP_060471534.1\|815999_817061_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	4.2e-15	31.1
WP_060471535.1\|817072_817954_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_060471536.1\|817964_818765_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_060471537.1\|818764_819535_+	hypothetical protein	NA	NA	NA	NA
WP_060471538.1\|819654_820305_+	sugar transferase	NA	NA	NA	NA
WP_060471539.1\|820319_820769_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA
WP_060471540.1\|820781_821282_+	glycosyltransferase	NA	NA	NA	NA
WP_060471541.1\|821290_823255_+	hypothetical protein	NA	NA	NA	NA
WP_190299900.1\|823260_824364_+	glycosyltransferase	NA	NA	NA	NA
WP_060471543.1\|824350_825376_+	glycosyltransferase family 2 protein	A0A1V0S9B9	Catovirus	9.1e-07	23.4
WP_060471544.1\|825376_826111_+	hypothetical protein	A0A2K9L4Z6	Tupanvirus	1.3e-07	28.7
WP_060471545.1\|826107_826818_+	acyltransferase	NA	NA	NA	NA
WP_060471546.1\|826835_827966_+	hypothetical protein	NA	NA	NA	NA
WP_060471547.1\|827962_829414_+	flippase	NA	NA	NA	NA
WP_082990707.1\|829620_829857_+	transferase	A0A191KBJ5	Streptococcus_virus	4.5e-18	59.7
WP_082990708.1\|831615_832875_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	22.3
WP_060471549.1\|833655_834579_+	AAA family ATPase	E9LUK9	Lactobacillus_phage	4.8e-108	67.0
WP_060471550.1\|834597_835017_+	hypothetical protein	E9LUK8	Lactobacillus_phage	5.2e-33	52.9
WP_060471551.1\|835009_835702_+	hypothetical protein	E9LUK7	Lactobacillus_phage	8.8e-54	48.3
WP_023192708.1\|837406_838015_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.5e-44	50.3
WP_060471553.1\|838031_839018_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.7e-29	37.3
WP_060471554.1\|839418_840294_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.5e-77	50.7
WP_060471556.1\|840941_841448_-	hypothetical protein	NA	NA	NA	NA
WP_060471557.1\|843862_845188_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	4.7e-56	36.3
WP_060471558.1\|845217_845826_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.6e-33	42.6
WP_060471560.1\|847415_848420_+	asparaginase	NA	NA	NA	NA
WP_003627805.1\|848510_848648_+	hypothetical protein	NA	NA	NA	NA
WP_190299910.1\|848727_848925_+	hypothetical protein	NA	NA	NA	NA
WP_060471562.1\|848982_849654_-	hypothetical protein	NA	NA	NA	NA
WP_060471563.1\|849742_851014_+	hypothetical protein	NA	NA	NA	NA
WP_060471564.1\|851160_851910_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.9e-35	40.4
WP_060471565.1\|851922_853719_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_060471567.1\|854744_855395_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_060471568.1\|855455_856142_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_060471569.1\|856291_858598_+	AAA family ATPase	NA	NA	NA	NA
WP_060471570.1\|860139_860700_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_060471571.1\|860758_861673_+	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	3.6e-31	33.2
WP_060471572.1\|861707_862271_+	elongation factor P	NA	NA	NA	NA
WP_060471574.1\|863538_864057_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_082990710.1\|864095_864740_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_060471576.1\|864872_865376_-	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA
WP_060471577.1\|865423_866425_-	adenosine deaminase	NA	NA	NA	NA
WP_060471578.1\|866514_867429_-	prolyl aminopeptidase	NA	NA	NA	NA
WP_060471579.1\|867578_868985_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471001.1\|869128_870406_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060471580.1\|870627_872232_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.9e-15	23.3
WP_003629963.1\|872627_873368_+	nicotinamide mononucleotide transporter	A0A0A7NTY4	Lactobacillus_phage	1.8e-121	84.5
WP_082990711.1\|874972_875152_-	hypothetical protein	NA	NA	NA	NA
WP_060471583.1\|876039_876219_+	hypothetical protein	NA	NA	NA	NA
WP_150121894.1\|876435_877222_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082990713.1\|877838_881039_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_060471587.1\|881228_883013_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	8.8e-90	37.7
WP_060471588.1\|882942_884115_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_060471579.1\|884260_885667_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471589.1\|886797_887079_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_060471590.1\|887068_887551_+	hypothetical protein	NA	NA	NA	NA
WP_060471591.1\|887540_887810_-	hypothetical protein	NA	NA	NA	NA
WP_060471592.1\|888120_889221_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_060472596.1\|889236_890328_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_082990714.1\|890345_891803_-	FAD-binding protein	M1HTN0	Paramecium_bursaria_Chlorella_virus	1.9e-21	28.0
WP_060471593.1\|892796_893354_-	serine acetyltransferase	NA	NA	NA	NA
WP_060471594.1\|893319_894504_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_060471595.1\|894545_895457_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	9.1e-59	41.2
WP_060471598.1\|896322_896550_+	hypothetical protein	NA	NA	NA	NA
WP_060471601.1\|899958_900405_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_060471602.1\|900434_900902_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003625237.1\|900898_901882_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_013855204.1\|901940_902183_+	acyl carrier protein	NA	NA	NA	NA
WP_060471603.1\|902192_903110_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_060471604.1\|903109_903841_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.6e-13	30.0
WP_060471605.1\|903862_905092_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_013855208.1\|905095_905566_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_060471606.1\|905570_905987_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
WP_060471607.1\|906000_907380_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_060471608.1\|907360_908203_+	hypothetical protein	NA	NA	NA	NA
WP_060471609.1\|908195_908966_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_054640358.1\|909024_909783_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_060471610.1\|909830_910820_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_060471611.1\|910893_911436_+	biotin transporter BioY	NA	NA	NA	NA
WP_060471612.1\|911557_911899_-	hypothetical protein	NA	NA	NA	NA
WP_082990716.1\|912448_913678_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	3.3e-64	38.0
WP_014564291.1\|915363_915921_-	adenine phosphoribosyltransferase	NA	NA	NA	NA
WP_060471614.1\|915923_917000_-	hypothetical protein	NA	NA	NA	NA
WP_060471615.1\|917215_918082_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-31	35.9
WP_150121897.1\|918479_919007_+\|transposase	transposase	NA	NA	NA	NA
WP_082990717.1\|919073_920000_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_060471617.1\|919977_922263_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_060471619.1\|924234_925041_+	ParA family protein	A0A1V0DZZ0	Clostridioides_phage	2.3e-21	30.1
WP_060463335.1\|925054_925303_+	hypothetical protein	NA	NA	NA	NA
WP_060471620.1\|927129_927420_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_060472599.1\|927462_927894_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_060471621.1\|928445_929684_+	OFA family MFS transporter	NA	NA	NA	NA
WP_082990718.1\|929988_930294_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.4e-16	51.1
WP_060472601.1\|930500_930755_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_060471623.1\|931880_933287_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

951792 : 1025388

Streptococcus_phage(11.76%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471641.1\|951792_952983_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.0e-114	55.1
WP_060471642.1\|953159_954542_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_060472602.1\|954625_955483_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_060471643.1\|955482_956280_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471644.1\|956409_957018_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	7.5e-33	37.5
WP_060471645.1\|957017_957569_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_060471646.1\|957793_959101_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.1e-93	44.3
WP_082990791.1\|965172_966438_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_150121898.1\|966822_966927_+	glycoside hydrolase family 32 protein	NA	NA	NA	NA
WP_060471648.1\|967020_967353_+	GH32 C-terminal domain-containing protein	NA	NA	NA	NA
WP_060471650.1\|971464_972475_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_060471651.1\|972491_973310_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_060471652.1\|973339_974260_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_060471653.1\|974263_974632_+	DUF956 family protein	NA	NA	NA	NA
WP_082990719.1\|974676_975558_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_060471655.1\|975715_976765_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	3.5e-46	34.3
WP_190299901.1\|976868_977447_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_082990794.1\|977435_978740_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.2e-45	48.1
WP_060471656.1\|978905_980279_-	amino acid permease	NA	NA	NA	NA
WP_060471657.1\|980592_983217_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_060471658.1\|983411_985223_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	Q76DQ7	Chlorella_virus	5.6e-92	37.4
WP_060471659.1\|985295_985589_+	hypothetical protein	NA	NA	NA	NA
WP_082990720.1\|985772_985859_-	hypothetical protein	NA	NA	NA	NA
WP_060471660.1\|986126_987404_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	4.5e-11	23.4
WP_060471662.1\|987865_989050_+	acetate kinase	NA	NA	NA	NA
WP_003626977.1\|989884_990298_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_060471392.1\|990459_991317_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471663.1\|991437_993276_+	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_060471664.1\|993280_994606_+	ATP-binding protein	NA	NA	NA	NA
WP_060471665.1\|994617_996849_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	3.4e-06	25.8
WP_003626968.1\|996881_997253_+	hypothetical protein	NA	NA	NA	NA
WP_060471666.1\|997270_998020_-	TIGR02452 family protein	NA	NA	NA	NA
WP_150121899.1\|999530_999716_+	hypothetical protein	NA	NA	NA	NA
WP_060471668.1\|1000538_1001252_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003632960.1\|1001268_1002423_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_060471669.1\|1003649_1003844_+	hypothetical protein	NA	NA	NA	NA
WP_013854640.1\|1003919_1004318_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_060471670.1\|1004422_1004623_-	hypothetical protein	NA	NA	NA	NA
WP_060471671.1\|1004730_1005114_+	hypothetical protein	NA	NA	NA	NA
WP_060471672.1\|1005152_1006028_+	serine/threonine protein phosphatase	A8E2N0	Enterococcus_phage	1.1e-16	27.6
WP_060471673.1\|1006153_1007551_+	ATP-binding protein	NA	NA	NA	NA
WP_060471676.1\|1010410_1011106_+	SLAP domain-containing protein	A0A0E3XCL7	Enterococcus_phage	8.1e-07	80.6
WP_060471677.1\|1011244_1012303_+	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA
WP_060471678.1\|1012375_1012954_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	7.4e-22	37.1
WP_082990723.1\|1012954_1013542_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	8.9e-15	37.3
WP_060471679.1\|1013608_1014268_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_060471680.1\|1014319_1015015_+	glycerophosphodiester phosphodiesterase	M1ICP4	Paramecium_bursaria_Chlorella_virus	1.8e-14	25.8
WP_060471683.1\|1018792_1019995_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.3e-40	29.8
WP_060471684.1\|1020157_1021564_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_082990787.1\|1021667_1022933_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471685.1\|1023211_1024489_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.7e-10	20.9
WP_060471686.1\|1024536_1025388_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1113537 : 1180007

Streptococcus_phage(18.18%)

protease,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471749.1\|1113537_1114395_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471750.1\|1114391_1114718_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_060471751.1\|1114723_1115488_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_060471752.1\|1115783_1118183_+	phosphoketolase family protein	NA	NA	NA	NA
WP_060471753.1\|1118249_1119098_+	patatin family protein	NA	NA	NA	NA
WP_060471754.1\|1122651_1123500_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_060471197.1\|1124561_1125740_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_190299902.1\|1126414_1127644_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.1e-122	57.4
WP_060471756.1\|1129371_1130139_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_060471757.1\|1130662_1131148_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_003633284.1\|1131272_1131530_+	hypothetical protein	NA	NA	NA	NA
WP_060471758.1\|1132345_1133707_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_014919185.1\|1135547_1136252_+	lysozyme	NA	NA	NA	NA
WP_060471759.1\|1136251_1137499_+	DEAD/DEAH box helicase	A0A1B1IS59	uncultured_Mediterranean_phage	2.8e-34	28.5
WP_060471760.1\|1137482_1138811_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_014919182.1\|1138976_1139165_-	hypothetical protein	NA	NA	NA	NA
WP_060471761.1\|1139272_1140415_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.2e-29	30.6
WP_060471762.1\|1140438_1140978_-	GtrA family protein	NA	NA	NA	NA
WP_060471763.1\|1140970_1141417_-	flavodoxin	NA	NA	NA	NA
WP_003633294.1\|1141560_1142388_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_060471764.1\|1142396_1143320_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_060471765.1\|1143381_1144281_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.3e-73	48.5
WP_060471766.1\|1144476_1145793_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QMQ9	Streptococcus_phage	1.3e-58	40.1
WP_060471767.1\|1146024_1147185_+	thiolase family protein	NA	NA	NA	NA
WP_060471768.1\|1147184_1148396_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_060471769.1\|1148395_1149559_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_003626759.1\|1149597_1149882_-	hypothetical protein	NA	NA	NA	NA
WP_060471770.1\|1151290_1152673_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.8e-66	32.7
WP_060471771.1\|1152794_1153607_+	recombination regulator RecX	NA	NA	NA	NA
WP_060471772.1\|1153616_1154099_+	hypothetical protein	NA	NA	NA	NA
WP_003627789.1\|1154100_1154562_-	hypothetical protein	NA	NA	NA	NA
WP_060471773.1\|1154667_1155537_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_060471774.1\|1155539_1157111_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	3.0e-33	25.4
WP_014563970.1\|1157181_1157463_-	DUF1827 family protein	NA	NA	NA	NA
WP_060471775.1\|1158766_1160956_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	9.7e-123	41.4
WP_190299879.1\|1161146_1161329_+	hypothetical protein	NA	NA	NA	NA
WP_005718606.1\|1161442_1161709_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_060471777.1\|1161708_1163442_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_060471778.1\|1163675_1164074_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_060471779.1\|1164165_1164906_+	adaptor protein MecA	NA	NA	NA	NA
WP_060471780.1\|1164983_1165832_+	competence protein	NA	NA	NA	NA
WP_060471781.1\|1165840_1166458_-	DsbA family protein	NA	NA	NA	NA
WP_060471782.1\|1166543_1167152_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_060471783.1\|1167275_1167908_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_060471784.1\|1167904_1168717_+	NAD kinase	NA	NA	NA	NA
WP_060471785.1\|1168700_1169597_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.8e-06	30.5
WP_060471001.1\|1171061_1172339_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060471787.1\|1173791_1174820_-	lactonase family protein	NA	NA	NA	NA
WP_060471788.1\|1174972_1177729_+	cation-transporting P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	4.2e-75	30.3
WP_060471789.1\|1178195_1179395_+	AI-2E family transporter	NA	NA	NA	NA
WP_060471790.1\|1179446_1180007_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_10

1203215 : 1261226

Streptococcus_phage(26.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082990798.1\|1203215_1204439_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.7e-121	58.5
WP_060471808.1\|1205170_1206895_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.8e-148	46.2
WP_060471809.1\|1206997_1209046_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_060471810.1\|1209035_1211876_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	7.7e-306	56.1
WP_060471811.1\|1211940_1212483_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_082990799.1\|1212541_1213846_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-45	48.1
WP_060471812.1\|1214053_1214935_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.2e-08	29.3
WP_060471813.1\|1214945_1215989_+	YvcK family protein	A1IMD5	Streptococcus_phage	3.7e-88	50.5
WP_060471814.1\|1215981_1216917_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	6.3e-47	35.2
WP_005718663.1\|1216968_1217553_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.1e-52	54.4
WP_060471816.1\|1219322_1220180_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471817.1\|1220338_1221964_+	SH3-like domain-containing protein	NA	NA	NA	NA
WP_082990734.1\|1224446_1225676_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.2e-123	58.2
WP_060471819.1\|1229397_1230429_+	hypothetical protein	NA	NA	NA	NA
WP_060471820.1\|1230484_1231501_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_060471821.1\|1231612_1232824_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_060471822.1\|1232849_1233608_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_060471823.1\|1233765_1235472_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	3.2e-89	37.5
WP_060471825.1\|1236290_1237589_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.4e-38	31.4
WP_012211631.1\|1237666_1238188_-	hypothetical protein	NA	NA	NA	NA
WP_060471826.1\|1238194_1239076_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_060471827.1\|1239144_1239843_+	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	3.5e-42	42.6
WP_060471828.1\|1239854_1240844_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_060471829.1\|1240843_1241323_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_060471830.1\|1241361_1241895_-	3'-5' exonuclease	M1PFD8	Streptococcus_phage	1.5e-21	36.6
WP_060471831.1\|1241992_1242889_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_082990735.1\|1242954_1244052_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.2e-35	42.1
WP_060471833.1\|1244041_1244854_+	ABC transporter permease	NA	NA	NA	NA
WP_060471834.1\|1244850_1245666_+	ABC transporter permease	NA	NA	NA	NA
WP_060471835.1\|1245662_1246736_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_060471836.1\|1246793_1247636_+	TIGR00159 family protein	NA	NA	NA	NA
WP_060471837.1\|1247632_1248592_+	hypothetical protein	NA	NA	NA	NA
WP_003626072.1\|1248622_1249975_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_060471838.1\|1250882_1251698_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_060471839.1\|1251714_1252428_+	hypothetical protein	NA	NA	NA	NA
WP_003633503.1\|1252431_1252899_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_060471840.1\|1252903_1254058_-	glycerate kinase	NA	NA	NA	NA
WP_060471841.1\|1255390_1256347_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471842.1\|1258380_1258566_+	type Z 30S ribosomal protein S14	NA	NA	NA	NA
WP_060471843.1\|1258661_1259177_+	VanZ family protein	NA	NA	NA	NA
WP_060471844.1\|1259267_1259996_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_060471024.1\|1260176_1261226_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3

DBSCAN-SWA_11

1267359 : 1328313

Bacillus_phage(18.75%)

tRNA,integrase,transposase

attL 1283257:1283282|attR 1290222:1290247

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471282.1\|1267359_1268766_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471851.1\|1269334_1270300_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_060471852.1\|1270334_1270727_+	SdpI family protein	NA	NA	NA	NA
WP_060471853.1\|1270726_1271449_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.2e-38	37.3
WP_060471854.1\|1271448_1272906_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.8e-32	33.7
WP_060471855.1\|1272959_1275155_-	LTA synthase family protein	W6LM83	Streptococcus_phage	1.1e-150	43.3
WP_003626132.1\|1275279_1275894_+	VanZ family protein	NA	NA	NA	NA
WP_060471856.1\|1275969_1277310_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_060471857.1\|1277567_1278845_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.7e-10	23.7
WP_082990676.1\|1280547_1281777_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	1.5e-64	38.1
WP_060471858.1\|1282032_1283046_-	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	5.3e-07	25.7
1283257:1283282	attL	NA	NA	NA	NA
WP_065214119.1\|1283609_1283990_+	hypothetical protein	NA	NA	NA	NA
WP_082990800.1\|1285367_1286507_-	hypothetical protein	U3PCP1	Lactobacillus_phage	2.2e-86	45.5
WP_060471860.1\|1287010_1287286_-	hypothetical protein	NA	NA	NA	NA
WP_060471861.1\|1287330_1287528_-	hypothetical protein	NA	NA	NA	NA
WP_060471862.1\|1287530_1287755_-	hypothetical protein	NA	NA	NA	NA
WP_060471863.1\|1287758_1287977_-	hypothetical protein	NA	NA	NA	NA
WP_060471864.1\|1287969_1288185_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060471865.1\|1288318_1288855_+	helix-turn-helix transcriptional regulator	Q20DG0	Lactobacillus_phage	1.6e-10	37.9
WP_060471866.1\|1288993_1290151_+\|integrase	site-specific integrase	P97010	Streptococcus_pyogenes_phage	5.8e-58	38.4
WP_060471867.1\|1290328_1291681_-	Mur ligase family protein	NA	NA	NA	NA
1290222:1290247	attR	NA	NA	NA	NA
WP_060471868.1\|1291830_1292430_+	thymidine kinase	A0A1W6JKV9	Lactococcus_phage	5.3e-47	48.5
WP_014563879.1\|1292446_1293535_+	peptide chain release factor 1	W8EDB3	Pseudomonas_phage	1.4e-05	44.6
WP_060471869.1\|1293527_1294370_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_060471870.1\|1294375_1295377_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.5e-49	38.9
WP_060471871.1\|1295460_1296090_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_060471872.1\|1296214_1296928_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_005718768.1\|1296947_1297172_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_060471873.1\|1297223_1297733_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_060471874.1\|1297732_1298281_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_012211671.1\|1298295_1299807_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_060471875.1\|1299817_1300780_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_060471876.1\|1300801_1302241_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_012211673.1\|1302252_1302693_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_060471877.1\|1302756_1302987_+	DUF1146 domain-containing protein	NA	NA	NA	NA
WP_060471878.1\|1303070_1304060_+	rod shape-determining protein	NA	NA	NA	NA
WP_082990736.1\|1304073_1304367_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_060471879.1\|1304375_1304603_+	DUF2969 domain-containing protein	NA	NA	NA	NA
WP_060471880.1\|1304624_1305818_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_060471881.1\|1305882_1306347_-	universal stress protein	NA	NA	NA	NA
WP_060471882.1\|1307380_1307662_-	hypothetical protein	NA	NA	NA	NA
WP_060471883.1\|1309555_1310869_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.3e-101	49.3
WP_060471884.1\|1310868_1311336_-	YueI family protein	NA	NA	NA	NA
WP_060471885.1\|1311425_1312037_-	30S ribosomal protein S4	NA	NA	NA	NA
WP_060471886.1\|1312318_1314028_+	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_060471887.1\|1314118_1315279_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	1.9e-37	31.3
WP_060471888.1\|1315278_1316496_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_082990737.1\|1319115_1319895_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_060471889.1\|1319900_1320680_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_190299881.1\|1322465_1322642_+	hypothetical protein	NA	NA	NA	NA
WP_060471890.1\|1322638_1322986_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_060471891.1\|1323042_1323258_+\|transposase	transposase	NA	NA	NA	NA
WP_060471892.1\|1326358_1327675_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	1.4e-55	36.0
WP_060471558.1\|1327704_1328313_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.6e-33	42.6

DBSCAN-SWA_12

1374270 : 1442690

unidentified_phage(13.33%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471922.1\|1374270_1377054_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	5.8e-88	27.5
WP_003627651.1\|1377053_1377257_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_060471923.1\|1377276_1377846_+	NUDIX hydrolase	NA	NA	NA	NA
WP_060471924.1\|1377848_1378157_+	hypothetical protein	NA	NA	NA	NA
WP_060471925.1\|1378174_1378870_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_060471926.1\|1378871_1380029_+	cysteine desulfurase	H7BUW1	unidentified_phage	5.8e-26	34.8
WP_060471927.1\|1380076_1380418_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_060471928.1\|1380425_1381553_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_060471929.1\|1383104_1383764_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_060471930.1\|1383763_1384408_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_060471931.1\|1384407_1386759_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	3.6e-59	26.9
WP_060471932.1\|1387948_1389226_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.8e-11	21.0
WP_060471933.1\|1389273_1390953_-	ribonuclease J	NA	NA	NA	NA
WP_060471934.1\|1390959_1391181_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_060471935.1\|1391531_1392086_-	peptide deformylase	K4JRM9	Caulobacter_phage	2.1e-10	41.3
WP_060471936.1\|1392337_1394182_+	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	8.1e-22	42.0
WP_060471937.1\|1394277_1395459_+	cell division protein FtsW	NA	NA	NA	NA
WP_060471938.1\|1395455_1395800_+	YlbG family protein	NA	NA	NA	NA
WP_060471939.1\|1395796_1396345_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_003627939.1\|1396347_1396842_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	9.7e-23	36.2
WP_060471940.1\|1396825_1397860_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_060471941.1\|1397937_1398633_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_060471942.1\|1398601_1400890_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	2.9e-21	37.7
WP_060471943.1\|1400886_1401873_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_014919008.1\|1401933_1402191_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_060471944.1\|1402389_1402659_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_060471945.1\|1402814_1404587_+	ribonuclease J	NA	NA	NA	NA
WP_060471946.1\|1404589_1405423_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_060471947.1\|1405612_1406803_+	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	2.3e-30	27.3
WP_060471948.1\|1406948_1408250_+	trigger factor	NA	NA	NA	NA
WP_060471949.1\|1408400_1409675_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.3e-131	54.9
WP_060471950.1\|1409664_1410255_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_060471951.1\|1411930_1412935_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_060471952.1\|1412927_1414301_-	aspartate kinase	NA	NA	NA	NA
WP_060471953.1\|1414771_1416088_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_060471954.1\|1416107_1416818_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_060471955.1\|1416820_1417975_+	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_060471956.1\|1417976_1418912_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_060472617.1\|1418904_1419684_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_060471957.1\|1419704_1420868_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_060471958.1\|1420887_1421946_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_150121909.1\|1422048_1423149_+	serine hydrolase	NA	NA	NA	NA
WP_060471960.1\|1423573_1425184_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_060471961.1\|1425481_1426333_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471962.1\|1426756_1427230_+	hypothetical protein	NA	NA	NA	NA
WP_060471963.1\|1427332_1428262_-	nucleoside hydrolase	NA	NA	NA	NA
WP_060471964.1\|1428400_1429321_+	aldo/keto reductase	NA	NA	NA	NA
WP_060471966.1\|1431053_1432340_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.3e-108	51.7
WP_014563771.1\|1433443_1434019_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_060471967.1\|1434127_1434985_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060471969.1\|1436205_1436505_-	type II toxin-antitoxin system HicB family antitoxin	A0A0A7S1E5	Clostridium_phage	9.4e-05	35.4
WP_082990802.1\|1436526_1436646_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_060471970.1\|1438593_1440000_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060471971.1\|1440133_1441090_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.3e-113	59.9
WP_060472619.1\|1441104_1441644_+	dihydrofolate reductase	G3MBI7	Bacillus_virus	1.1e-24	39.5
WP_060471972.1\|1441640_1442690_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.2e-49	36.0

DBSCAN-SWA_13

1453842 : 1506401

Lysinibacillus_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082990745.1\|1453842_1455072_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	4.8e-63	37.6
WP_060471982.1\|1455309_1456569_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	4.9e-10	20.3
WP_060471985.1\|1458210_1459137_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_190299882.1\|1462347_1463529_+	hypothetical protein	NA	NA	NA	NA
WP_060471986.1\|1463626_1464940_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	1.9e-57	32.1
WP_060471197.1\|1465315_1466494_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060471987.1\|1466642_1468109_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_060471988.1\|1468187_1468979_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_060471989.1\|1469069_1470122_+	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_003628158.1\|1470111_1470405_+	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_060471990.1\|1470405_1471320_+	citrate lyase subunit beta	NA	NA	NA	NA
WP_060471991.1\|1471291_1472851_+	citrate lyase subunit alpha	NA	NA	NA	NA
WP_060471992.1\|1474377_1475574_+	SLAP domain-containing protein	NA	NA	NA	NA
WP_150121947.1\|1475675_1476917_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.6e-10	20.7
WP_060471993.1\|1477015_1478065_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	3.5e-46	34.3
WP_060471994.1\|1478346_1478640_-	hypothetical protein	NA	NA	NA	NA
WP_060471995.1\|1478787_1479243_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_003626603.1\|1479273_1479432_+	hypothetical protein	NA	NA	NA	NA
WP_060471996.1\|1481984_1482542_-	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_060471997.1\|1482673_1483054_+	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_060471998.1\|1483309_1483642_-	hypothetical protein	A0A0P0I7G8	Lactobacillus_phage	8.8e-20	46.2
WP_060471999.1\|1484766_1486113_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_060472000.1\|1486215_1486722_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_060472001.1\|1488351_1488861_-\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_060472002.1\|1488921_1489869_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_060472622.1\|1489924_1490287_+	hypothetical protein	NA	NA	NA	NA
WP_060472003.1\|1490301_1492542_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1X9SH80	Bradyrhizobium_phage	1.7e-10	35.7
WP_060472004.1\|1492541_1492979_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_014918921.1\|1493286_1494573_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	1.8e-20	25.3
WP_060472005.1\|1494578_1496432_+\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	1.7e-11	24.4
WP_060472006.1\|1496486_1497671_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_060471197.1\|1497977_1499156_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472623.1\|1499484_1500678_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	7.8e-42	32.7
WP_060472007.1\|1500849_1501686_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.6e-36	35.9
WP_060472008.1\|1501732_1502545_+	sugar-phosphatase	NA	NA	NA	NA
WP_060472009.1\|1503637_1505023_-	amino acid permease	NA	NA	NA	NA
WP_082990803.1\|1505135_1506401_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.3e-51	42.6

DBSCAN-SWA_14

1536606 : 1596652

unidentified_phage(17.65%)

tRNA,integrase,transposase,protease

attL 1550756:1550772|attR 1593724:1593740

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060472034.1\|1536606_1537806_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.1e-48	34.1
WP_060472035.1\|1537843_1538536_-	hemolysin III family protein	NA	NA	NA	NA
WP_060472626.1\|1538652_1539483_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	2.4e-21	45.9
WP_060472036.1\|1539485_1539716_+	YozE family protein	NA	NA	NA	NA
WP_060472037.1\|1539763_1541356_+	sodium:proton antiporter	NA	NA	NA	NA
WP_060472038.1\|1541379_1542231_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_012211825.1\|1542220_1542973_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	1.3e-26	38.6
WP_060472039.1\|1543033_1543882_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	6.3e-30	36.8
WP_060472040.1\|1543952_1546067_+	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	5.5e-99	37.5
WP_060472041.1\|1546088_1547405_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_060472042.1\|1547404_1548313_+	tyrosine recombinase	A0A1P8DJJ6	Virus_Rctr41k	1.8e-14	25.4
WP_060472043.1\|1548321_1548846_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
WP_060472044.1\|1548856_1550260_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IB03	Erwinia_phage	1.7e-27	24.7
WP_060472045.1\|1550412_1551312_+	aldose 1-epimerase family protein	NA	NA	NA	NA
1550756:1550772	attL	NA	NA	NA	NA
WP_082990748.1\|1551494_1552799_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.2e-45	48.7
WP_060472046.1\|1553749_1554115_-	hypothetical protein	NA	NA	NA	NA
WP_060472047.1\|1554274_1555363_-	hypothetical protein	NA	NA	NA	NA
WP_060472048.1\|1555925_1556696_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_060472049.1\|1557463_1558168_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_060472050.1\|1558148_1558964_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_060472051.1\|1559453_1559837_+	CrcB family protein	A0A2H4PQR0	Staphylococcus_phage	4.7e-09	37.4
WP_060472052.1\|1559838_1560216_+	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_060471197.1\|1560290_1561469_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_082990749.1\|1562119_1563373_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	6.6e-116	56.4
WP_060472054.1\|1565447_1566725_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	9.9e-11	23.7
WP_060472055.1\|1567321_1568647_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	3.6e-56	36.3
WP_060472056.1\|1568981_1571078_+	putative ornithine decarboxylase	NA	NA	NA	NA
WP_060472057.1\|1571094_1572354_+	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_082990751.1\|1572419_1573103_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_060472058.1\|1573095_1574436_-	ATP synthase subunit J	NA	NA	NA	NA
WP_060472059.1\|1574533_1576306_+	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.7e-77	38.6
WP_060472060.1\|1576414_1576864_+	transcriptional regulator	NA	NA	NA	NA
WP_060472061.1\|1577025_1578432_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_060472062.1\|1578700_1579333_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_060472629.1\|1579420_1580035_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_060472063.1\|1580158_1581256_+	serine hydrolase	NA	NA	NA	NA
WP_060472630.1\|1581322_1582150_+	pyridoxamine kinase	NA	NA	NA	NA
WP_023191946.1\|1582149_1582707_+	ECF transporter S component	NA	NA	NA	NA
WP_060472064.1\|1582788_1583994_+	L,D-transpeptidase	NA	NA	NA	NA
WP_060472066.1\|1584601_1585900_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_060472067.1\|1587031_1588084_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.3e-48	36.0
WP_060472069.1\|1588663_1589950_+	peptidase T	NA	NA	NA	NA
WP_060472070.1\|1590165_1590723_+	Fic family protein	NA	NA	NA	NA
WP_060472071.1\|1591249_1592854_+	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	9.2e-14	21.4
WP_057730255.1\|1592843_1594427_+	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	1.5e-19	26.5
1593724:1593740	attR	NA	NA	NA	NA
WP_060472072.1\|1594433_1595174_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_012211854.1\|1595186_1595564_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_060471024.1\|1595602_1596652_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3

DBSCAN-SWA_15

1600797 : 1665238

Streptococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471197.1\|1600797_1601976_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_014918851.1\|1602152_1602863_-	hypothetical protein	NA	NA	NA	NA
WP_060472075.1\|1604345_1604783_-	hypothetical protein	NA	NA	NA	NA
WP_014563659.1\|1604870_1605347_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012211860.1\|1605611_1606031_+	cytidine deaminase	NA	NA	NA	NA
WP_060472077.1\|1606322_1607180_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_150121912.1\|1607785_1608070_+	hypothetical protein	NA	NA	NA	NA
WP_060472079.1\|1608307_1609357_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	7.6e-49	36.0
WP_060472080.1\|1609453_1609813_+	hypothetical protein	NA	NA	NA	NA
WP_060472081.1\|1610585_1610864_+	hypothetical protein	NA	NA	NA	NA
WP_173001848.1\|1612995_1613157_+	hypothetical protein	NA	NA	NA	NA
WP_060472083.1\|1613211_1613871_+	hypothetical protein	NA	NA	NA	NA
WP_150121914.1\|1614061_1614730_-	hypothetical protein	NA	NA	NA	NA
WP_060472085.1\|1614920_1615505_+	recombinase family protein	M9Q1K0	Clostridium_phage	3.5e-19	34.0
WP_060472086.1\|1615659_1615839_-	hypothetical protein	NA	NA	NA	NA
WP_060472087.1\|1616156_1616705_-	cysteine hydrolase	G3MA16	Bacillus_virus	3.5e-29	42.4
WP_060472088.1\|1616706_1618161_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	7.2e-98	42.7
WP_060472089.1\|1618276_1618981_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	3.1e-06	31.8
WP_060472090.1\|1619734_1620268_+	GNAT family N-acetyltransferase	E4ZFP7	Streptococcus_phage	2.6e-13	29.2
WP_082990753.1\|1622825_1623083_+	DUF3923 family protein	NA	NA	NA	NA
WP_060472092.1\|1623373_1623991_+	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_060472093.1\|1625217_1627077_+	DNA mismatch repair protein MutS	F2Y1C6	Organic_Lake_phycodnavirus	1.5e-07	32.1
WP_060472094.1\|1627123_1627354_-	hypothetical protein	NA	NA	NA	NA
WP_060472095.1\|1627403_1627607_-	hypothetical protein	NA	NA	NA	NA
WP_060472096.1\|1627924_1629430_+	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	6.0e-23	24.5
WP_060471098.1\|1631035_1632238_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.3e-40	29.8
WP_060472097.1\|1632566_1633472_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_060472098.1\|1636697_1641980_+	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.1e-07	29.7
WP_060471015.1\|1642270_1643449_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_082990676.1\|1643626_1644856_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	1.5e-64	38.1
WP_060472099.1\|1645093_1646353_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.8e-11	20.6
WP_060472100.1\|1646539_1648474_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_060472101.1\|1648668_1649394_+	trehalose operon repressor	NA	NA	NA	NA
WP_060472102.1\|1649404_1651066_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_060472103.1\|1651112_1652693_-	SH3-like domain-containing protein	NA	NA	NA	NA
WP_060472104.1\|1652841_1653279_+	hypothetical protein	NA	NA	NA	NA
WP_060472105.1\|1653449_1654004_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_190299908.1\|1654061_1655312_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.7e-124	59.3
WP_012211876.1\|1655430_1655802_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_060472107.1\|1655855_1656749_+	restriction endonuclease	NA	NA	NA	NA
WP_060472109.1\|1658327_1659593_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_060472110.1\|1659602_1660421_+	DUF3100 domain-containing protein	NA	NA	NA	NA
WP_060472111.1\|1660413_1660905_+	hypothetical protein	NA	NA	NA	NA
WP_060472112.1\|1663257_1664178_+	WYL domain-containing protein	NA	NA	NA	NA
WP_060471009.1\|1664188_1665238_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	7.8e-46	34.0

DBSCAN-SWA_16

1744987 : 1791100

Bacillus_virus(18.18%)

integrase,transposase

attL 1742482:1742497|attR 1747025:1747040

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1742482:1742497	attL	NA	NA	NA	NA
WP_003626321.1\|1744987_1745608_+\|integrase	tyrosine-type recombinase/integrase	E2ELN7	Clostridium_phage	4.3e-20	36.4
WP_060472164.1\|1745864_1746143_-	hypothetical protein	NA	NA	NA	NA
WP_060472165.1\|1747673_1747871_+	hypothetical protein	NA	NA	NA	NA
1747025:1747040	attR	NA	NA	NA	NA
WP_060472166.1\|1747913_1749254_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_060472170.1\|1752383_1753142_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_057729960.1\|1753297_1753564_+	ACT domain-containing protein	NA	NA	NA	NA
WP_060472171.1\|1755101_1755371_+	hypothetical protein	NA	NA	NA	NA
WP_060472172.1\|1756255_1756738_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_060472173.1\|1758139_1758658_+	hypothetical protein	M1PSC3	Streptococcus_phage	1.9e-21	37.2
WP_060472174.1\|1758746_1759214_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_060472181.1\|1762762_1763389_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_060472182.1\|1763485_1765432_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	4.1e-117	41.4
WP_060472183.1\|1765448_1767905_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	6.6e-96	31.0
WP_060472184.1\|1768050_1769025_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_060472185.1\|1769045_1769981_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_060472186.1\|1770681_1771035_-	transcriptional regulator	NA	NA	NA	NA
WP_060471015.1\|1772450_1773629_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472188.1\|1775278_1776130_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060472189.1\|1776177_1777443_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	7.5e-11	23.7
WP_023061618.1\|1777565_1777820_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_082990763.1\|1778471_1779242_+	DUF1906 domain-containing protein	Q6SE63	Lactobacillus_prophage	1.0e-58	52.5
WP_060472190.1\|1780173_1780782_+	DUF5052 family protein	A0A2K9VCV0	Lactobacillus_phage	1.3e-37	43.8
WP_060472191.1\|1780827_1781319_-	adenylate kinase	A0A097BYE2	Leuconostoc_phage	8.5e-19	35.5
WP_060472192.1\|1781325_1781781_-	hypothetical protein	NA	NA	NA	NA
WP_060472195.1\|1783492_1784575_+	tyrosine recombinase XerS	NA	NA	NA	NA
WP_060472196.1\|1784818_1785868_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.6e-46	34.3
WP_060472197.1\|1787446_1788328_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.8e-10	35.9
WP_060472198.1\|1788401_1788818_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_082990787.1\|1789834_1791100_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0

DBSCAN-SWA_17

1812090 : 1859544

Streptococcus_phage(20.0%)

tRNA,integrase,transposase

attL 1845434:1845493|attR 1853486:1853547

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060472211.1\|1812090_1813389_-\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	3.3e-46	27.3
WP_060472634.1\|1813442_1813940_-	hypothetical protein	NA	NA	NA	NA
WP_060472212.1\|1813926_1816722_-	DEAD/DEAH box helicase	A0A1X9I5C8	Streptococcus_phage	7.9e-69	27.0
WP_060472213.1\|1816740_1820355_-	helicase-exonuclease AddAB subunit AddA	S5M596	Bacillus_phage	5.5e-22	24.1
WP_060472214.1\|1820357_1823840_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_060472215.1\|1823921_1824830_+	mevalonate kinase	NA	NA	NA	NA
WP_060472216.1\|1824829_1825792_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_060472217.1\|1825835_1826918_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_060472218.1\|1826930_1827947_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_060472219.1\|1827998_1829381_-	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_060472220.1\|1829355_1830339_-	ABC transporter permease	NA	NA	NA	NA
WP_060472221.1\|1830328_1831081_-	hypothetical protein	NA	NA	NA	NA
WP_060472222.1\|1831166_1831736_+	signal peptidase I	NA	NA	NA	NA
WP_060471024.1\|1831786_1832836_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3
WP_060472223.1\|1832993_1833185_+	hypothetical protein	NA	NA	NA	NA
WP_060472224.1\|1834619_1835408_-	hypothetical protein	NA	NA	NA	NA
WP_060472225.1\|1835421_1836252_-	hypothetical protein	NA	NA	NA	NA
WP_060472226.1\|1836262_1837108_-	hypothetical protein	NA	NA	NA	NA
WP_060472227.1\|1837107_1837815_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.2e-15	26.4
WP_060472228.1\|1837816_1838182_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_060472229.1\|1838443_1839685_-	peptidase T	NA	NA	NA	NA
WP_060472230.1\|1839704_1840502_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_060472231.1\|1840494_1841181_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014563473.1\|1841280_1841721_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_060472232.1\|1841720_1842377_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_060472233.1\|1842525_1843785_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.9e-10	22.6
WP_082990764.1\|1844023_1845253_+\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	2.0e-64	37.9
1845434:1845493	attL	NA	NA	NA	NA
WP_060472235.1\|1845631_1847038_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_014563242.1\|1847219_1847597_-\|integrase	tyrosine-type recombinase/integrase	H0USV4	Bacillus_phage	2.9e-11	42.2
WP_014563241.1\|1847690_1849055_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_060471015.1\|1850166_1851345_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472237.1\|1853579_1854692_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	37.6
1853486:1853547	attR	NA	NA	NA	NA
WP_060472238.1\|1854708_1856544_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.5e-57	35.1
WP_060472239.1\|1856570_1858634_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_060472240.1\|1858626_1859544_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA

DBSCAN-SWA_18

1867192 : 1911159

Lactobacillus_phage(82.05%)

terminase,plate,transposase,portal,capsid,integrase,tail

attL 1893551:1893584|attR 1914307:1914340

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060472247.1\|1867192_1868314_-	lysin	Q71JA9	Lactobacillus_phage	6.4e-179	82.8
WP_060472248.1\|1868376_1868793_-	hypothetical protein	L0P6Z4	Lactobacillus_phage	5.0e-12	37.2
WP_060472249.1\|1868794_1869034_-	hypothetical protein	L0P6E4	Lactobacillus_phage	1.6e-23	72.2
WP_060472250.1\|1869017_1869239_-	hypothetical protein	NA	NA	NA	NA
WP_060472637.1\|1869249_1869639_-	hypothetical protein	NA	NA	NA	NA
WP_060472251.1\|1869607_1869793_-	hypothetical protein	NA	NA	NA	NA
WP_060472252.1\|1869809_1870409_-	hypothetical protein	NA	NA	NA	NA
WP_060472253.1\|1870509_1870851_-	hypothetical protein	NA	NA	NA	NA
WP_150121925.1\|1870900_1871284_-	hypothetical protein	NA	NA	NA	NA
WP_060472255.1\|1871294_1873559_-	hypothetical protein	L0P6E1	Lactobacillus_phage	2.3e-103	40.4
WP_060472256.1\|1873562_1874144_-	DUF2313 domain-containing protein	L0P8N4	Lactobacillus_phage	9.8e-83	83.6
WP_060472257.1\|1874136_1875282_-\|plate	baseplate J/gp47 family protein	L0P7C2	Lactobacillus_phage	9.0e-197	90.0
WP_060472638.1\|1875271_1875685_-	DUF2634 domain-containing protein	L0P6H1	Lactobacillus_phage	8.3e-68	97.8
WP_060472258.1\|1875710_1876055_-	DUF2577 domain-containing protein	L0P6Y6	Lactobacillus_phage	6.1e-56	93.9
WP_060472259.1\|1876027_1877095_-	hypothetical protein	L0P6D8	Lactobacillus_phage	3.2e-180	90.7
WP_060472260.1\|1877091_1877790_-	hypothetical protein	L0P8M9	Lactobacillus_phage	1.3e-113	94.4
WP_150121949.1\|1877796_1878270_-	hypothetical protein	L0P7B8	Lactobacillus_phage	1.4e-55	88.5
WP_060472261.1\|1881075_1881492_-	hypothetical protein	L0P6Y3	Lactobacillus_phage	1.2e-66	97.8
WP_060472262.1\|1881504_1881981_-\|tail	phage tail protein	L0P6D4	Lactobacillus_phage	6.4e-80	92.9
WP_060472263.1\|1881992_1883453_-\|tail	phage tail sheath subtilisin-like domain-containing protein	L0P8M7	Lactobacillus_phage	1.1e-252	90.5
WP_060472264.1\|1883456_1883660_-	hypothetical protein	L0P7B3	Lactobacillus_phage	2.2e-21	80.6
WP_060472265.1\|1883628_1884054_-	hypothetical protein	L0P6G4	Lactobacillus_phage	1.4e-73	94.3
WP_060472266.1\|1884050_1884452_-	HK97 gp10 family phage protein	A9D9U1	Lactobacillus_prophage	1.1e-37	53.5
WP_060472267.1\|1884448_1884811_-	hypothetical protein	A9D9T8	Lactobacillus_prophage	1.4e-39	67.5
WP_060472268.1\|1884807_1885179_-	hypothetical protein	L0P6D1	Lactobacillus_phage	1.1e-58	91.9
WP_060472269.1\|1885194_1886274_-	hypothetical protein	X2CY65	Lactobacillus_phage	1.2e-163	79.2
WP_060472270.1\|1886277_1886820_-	phage scaffolding protein	L0P7B0	Lactobacillus_phage	3.5e-58	67.4
WP_060472271.1\|1886946_1888011_-\|capsid	minor capsid protein	A9D9S7	Lactobacillus_prophage	5.0e-125	64.7
WP_060472272.1\|1888022_1889492_-\|portal	phage portal protein	X2CY64	Lactobacillus_phage	1.1e-178	66.7
WP_060472273.1\|1889482_1890712_-\|terminase	PBSX family phage terminase large subunit	A9D9R9	Lactobacillus_prophage	9.4e-176	69.1
WP_060472274.1\|1890698_1891193_-	helix-turn-helix domain-containing protein	L0P6X1	Lactobacillus_phage	7.7e-36	55.5
WP_060472275.1\|1891804_1892245_-	hypothetical protein	L0P6G6	Lactobacillus_phage	1.3e-71	92.5
WP_190299884.1\|1892362_1892908_-	hypothetical protein	NA	NA	NA	NA
WP_060472278.1\|1893072_1893423_-	VRR-NUC domain-containing protein	L0P7E5	Lactobacillus_phage	4.7e-48	80.2
WP_060472279.1\|1893549_1893969_-	hypothetical protein	A0A1W6JQL4	Staphylococcus_phage	1.3e-07	36.4
1893551:1893584	attL	NA	NA	NA	NA
WP_150121926.1\|1894074_1894326_-	hypothetical protein	NA	NA	NA	NA
WP_060472281.1\|1894334_1894610_-	hypothetical protein	NA	NA	NA	NA
WP_082990804.1\|1894599_1895013_-	DUF1599 domain-containing protein	F8J1G5	Lactobacillus_phage	8.4e-12	42.4
WP_060472282.1\|1895147_1895348_-	hypothetical protein	NA	NA	NA	NA
WP_060472283.1\|1895630_1897952_-	DNA primase	Q9T1H6	Lactobacillus_phage	0.0e+00	78.8
WP_060472284.1\|1898009_1898546_-	DUF669 domain-containing protein	Q9T1H8	Lactobacillus_phage	4.8e-76	75.8
WP_060472285.1\|1898563_1899925_-	DEAD/DEAH box helicase	A0A0P0ID30	Lactobacillus_phage	7.3e-129	52.1
WP_060472286.1\|1899933_1900596_-	AAA family ATPase	Q9T1I1	Lactobacillus_phage	4.1e-101	74.4
WP_060472287.1\|1900595_1900838_-	hypothetical protein	NA	NA	NA	NA
WP_060472288.1\|1900830_1901112_-	hypothetical protein	NA	NA	NA	NA
WP_060472289.1\|1901095_1901434_-	hypothetical protein	NA	NA	NA	NA
WP_190299885.1\|1901463_1901628_-	hypothetical protein	NA	NA	NA	NA
WP_060472290.1\|1901617_1901917_-	hypothetical protein	NA	NA	NA	NA
WP_060472291.1\|1901943_1902693_-	phage antirepressor KilAC domain-containing protein	Q6SEF4	Lactobacillus_prophage	6.7e-92	68.7
WP_060472292.1\|1902708_1902897_-	helix-turn-helix transcriptional regulator	Q9T1I7	Lactobacillus_phage	1.3e-12	53.2
WP_060472293.1\|1903162_1903504_+	helix-turn-helix transcriptional regulator	A0A1S5SA75	Streptococcus_phage	1.4e-12	35.7
WP_060472294.1\|1903496_1903898_+	ImmA/IrrE family metallo-endopeptidase	X2CXW8	Lactobacillus_phage	3.0e-22	37.5
WP_150121927.1\|1903974_1904202_+	hypothetical protein	NA	NA	NA	NA
WP_060472296.1\|1904436_1904634_+	hypothetical protein	NA	NA	NA	NA
WP_060472297.1\|1904647_1904869_+	hypothetical protein	E9LUL0	Lactobacillus_phage	1.6e-17	64.5
WP_060472298.1\|1905067_1906198_+\|integrase	site-specific integrase	A0A0M9JJ77	Lactobacillus_phage	1.7e-70	42.6
WP_060472299.1\|1906289_1907168_+	YitT family protein	NA	NA	NA	NA
WP_060472300.1\|1909752_1911159_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
1914307:1914340	attR	NA	NA	NA	NA

DBSCAN-SWA_19

1920841 : 1999849

Streptococcus_phage(10.53%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471024.1\|1920841_1921891_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3
WP_060472305.1\|1926098_1926965_-	homoserine kinase	NA	NA	NA	NA
WP_060472306.1\|1926979_1928209_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_060472307.1\|1928323_1929814_+	threonine synthase	NA	NA	NA	NA
WP_060472308.1\|1929828_1931190_+	aspartate kinase	NA	NA	NA	NA
WP_060472311.1\|1932383_1933709_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	1.6e-56	36.3
WP_060471558.1\|1933738_1934347_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.6e-33	42.6
WP_060472312.1\|1934707_1935235_-	hypothetical protein	NA	NA	NA	NA
WP_060472313.1\|1935311_1935917_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_014918655.1\|1935919_1936081_-	hypothetical protein	NA	NA	NA	NA
WP_060472314.1\|1936096_1937263_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_060472316.1\|1939189_1939726_-	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_060472640.1\|1941724_1942954_-	arginine deiminase	NA	NA	NA	NA
WP_060472317.1\|1943018_1943873_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_060472318.1\|1944001_1946275_+	HAD-IC family P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	7.1e-44	27.2
WP_082990766.1\|1946342_1946843_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_082990767.1\|1947069_1947246_+	PLDc N-terminal domain-containing protein	NA	NA	NA	NA
WP_082990768.1\|1948610_1949405_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_060472320.1\|1949420_1950350_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.4e-101	59.9
WP_060472321.1\|1950492_1951020_-	adenine phosphoribosyltransferase	NA	NA	NA	NA
WP_060472322.1\|1951124_1953398_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.7e-77	35.7
WP_060472323.1\|1953518_1954208_-	class A sortase	NA	NA	NA	NA
WP_060472324.1\|1954210_1956049_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	5.2e-21	24.1
WP_003628994.1\|1956217_1956433_+	hypothetical protein	NA	NA	NA	NA
WP_060472325.1\|1957668_1958946_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	20.2
WP_060472326.1\|1960752_1961907_-	molecular chaperone DnaJ	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	1.3e-20	29.4
WP_060472327.1\|1961988_1963848_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	9.3e-143	48.9
WP_060472328.1\|1963864_1964446_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_060472329.1\|1964461_1965511_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_060472330.1\|1965788_1967066_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.8e-12	21.4
WP_060472331.1\|1967150_1968113_-	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
WP_060472332.1\|1968118_1969012_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_060472333.1\|1969063_1969429_-	ribosome-binding factor A	NA	NA	NA	NA
WP_060472334.1\|1969448_1972055_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	9.7e-21	24.7
WP_060472335.1\|1972059_1972371_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA
WP_012212001.1\|1972373_1972670_-	YlxR family protein	NA	NA	NA	NA
WP_060472642.1\|1972678_1973860_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_060472336.1\|1973879_1974356_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_060472337.1\|1974465_1978776_-	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	6.8e-19	34.1
WP_060472338.1\|1978781_1980479_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_060472339.1\|1980522_1981779_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_060472340.1\|1981789_1982605_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_060472341.1\|1982606_1983341_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	8.5e-23	39.7
WP_060472342.1\|1983343_1983901_-	ribosome recycling factor	NA	NA	NA	NA
WP_060472343.1\|1983900_1984626_-	UMP kinase	NA	NA	NA	NA
WP_060472344.1\|1984764_1985790_-	elongation factor Ts	NA	NA	NA	NA
WP_060472345.1\|1985823_1986597_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_060472346.1\|1986758_1987790_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_060472347.1\|1987855_1988470_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_060472348.1\|1988592_1989774_+	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	6.1e-47	36.1
WP_060472349.1\|1989831_1991775_-	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	9.3e-61	28.5
WP_060472350.1\|1991869_1993663_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	1.1e-18	24.5
WP_060472351.1\|1993655_1995413_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	3.8e-45	26.2
WP_012212011.1\|1995494_1995713_-	YneF family protein	NA	NA	NA	NA
WP_082990769.1\|1995775_1996039_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_060472352.1\|1996188_1996815_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	1.5e-12	52.2
WP_060472353.1\|1996843_1997629_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_003629071.1\|1998669_1999017_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_060472354.1\|1999129_1999849_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_20

2004842 : 2062883

Prochlorococcus_phage(13.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471001.1\|2004842_2006120_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060472358.1\|2006208_2007630_-	C69 family dipeptidase	NA	NA	NA	NA
WP_060472359.1\|2007672_2008965_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_060472360.1\|2008965_2012535_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_060472361.1\|2012550_2013237_-	ribonuclease III	M1HR51	Paramecium_bursaria_Chlorella_virus	6.9e-19	30.1
WP_060472362.1\|2015307_2017059_-	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_060472363.1\|2017261_2018191_-	ABC transporter permease	NA	NA	NA	NA
WP_060472364.1\|2018205_2019165_-	ABC transporter permease	NA	NA	NA	NA
WP_060472365.1\|2019167_2020154_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.8e-13	28.1
WP_060472366.1\|2020157_2021192_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.0e-15	29.2
WP_060472367.1\|2021312_2021555_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	2.4e-06	55.4
WP_060472368.1\|2021585_2022587_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_060472644.1\|2022607_2024638_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_060472369.1\|2024639_2026301_-	DAK2 domain-containing protein	NA	NA	NA	NA
WP_060472370.1\|2026322_2026685_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_014563392.1\|2026841_2027027_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_060472371.1\|2027342_2028029_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_060472372.1\|2028028_2028679_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_060472373.1\|2028691_2029582_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_060472374.1\|2029582_2031598_-	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A1V0SD90	Indivirus	7.5e-21	27.1
WP_060472645.1\|2031587_2032343_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_082990770.1\|2032347_2033712_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_060472376.1\|2033662_2034607_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.8e-10	34.7
WP_060472377.1\|2034620_2037020_-	primosomal protein N'	NA	NA	NA	NA
WP_003627587.1\|2037069_2037294_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_060472378.1\|2037296_2037911_-	guanylate kinase	A0A1C9KBX3	Skunkpox_virus	2.4e-18	29.8
WP_060472379.1\|2038044_2039451_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_082990787.1\|2039554_2040820_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060471460.1\|2041596_2042646_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-49	36.3
WP_060472380.1\|2042755_2044438_-	DNA repair protein RecN	NA	NA	NA	NA
WP_060472381.1\|2044448_2045261_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_060472382.1\|2045261_2046131_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_060472383.1\|2046133_2046376_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_060472384.1\|2046378_2047722_-	exodeoxyribonuclease VII large subunit	A0A160DEV2	Gordonia_phage	7.7e-30	32.1
WP_060472385.1\|2047711_2048560_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	6.5e-43	40.7
WP_060472385.1\|2049590_2050439_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	6.5e-43	40.7
WP_060472386.1\|2050497_2050890_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_060472387.1\|2050897_2051323_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_060472388.1\|2051340_2051910_-	elongation factor P	NA	NA	NA	NA
WP_060472389.1\|2051993_2053103_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_060472390.1\|2053344_2054622_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.4e-11	23.5
WP_060472391.1\|2054682_2054973_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_003627604.1\|2054991_2055303_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_060472392.1\|2055469_2056837_-	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_060472393.1\|2056975_2058001_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_003547962.1\|2059343_2059523_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_060472394.1\|2059593_2061390_-	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_060472395.1\|2061605_2062883_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	8.4e-10	23.9

DBSCAN-SWA_21

2079673 : 2140080

Paramecium_bursaria_Chlorella_virus(22.22%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060471579.1\|2079673_2081080_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_082990791.1\|2081183_2082449_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_060472412.1\|2082861_2086050_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_060472413.1\|2086042_2087128_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.1e-56	35.8
WP_060472414.1\|2087127_2088405_-	dihydroorotase	NA	NA	NA	NA
WP_060472415.1\|2088404_2089361_-	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	2.2e-26	31.3
WP_060472416.1\|2089506_2090049_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_060472417.1\|2090215_2091139_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_060472418.1\|2091393_2092098_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_003627631.1\|2092099_2092723_+	orotate phosphoribosyltransferase	A0A0B5IW17	Pandoravirus	9.1e-26	32.9
WP_060472419.1\|2092975_2093236_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_060472420.1\|2093455_2094634_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472421.1\|2097026_2098112_+	BMP family protein	A0A0A7DN02	Lactobacillus_phage	7.0e-82	51.1
WP_060472422.1\|2098178_2099726_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-15	28.2
WP_060472423.1\|2099706_2100834_+	ABC transporter permease	NA	NA	NA	NA
WP_060472424.1\|2100830_2101787_+	ABC transporter permease	NA	NA	NA	NA
WP_060472425.1\|2102002_2104627_+	cation-translocating P-type ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	5.6e-85	31.2
WP_003630981.1\|2106145_2106790_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_082990771.1\|2106887_2107094_-	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_025283725.1\|2107086_2107347_-	hypothetical protein	NA	NA	NA	NA
WP_011678534.1\|2107515_2108730_-	MFS transporter	NA	NA	NA	NA
WP_060472427.1\|2108878_2109178_-	hypothetical protein	NA	NA	NA	NA
WP_060472646.1\|2109321_2109870_-	hypothetical protein	NA	NA	NA	NA
WP_060472428.1\|2110044_2110359_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_007126420.1\|2110405_2111266_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_060472429.1\|2111278_2112019_-	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-25	30.8
WP_060472430.1\|2112028_2112703_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003627894.1\|2112683_2113343_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_060472431.1\|2113510_2113744_+	hypothetical protein	NA	NA	NA	NA
WP_082990772.1\|2114051_2115281_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	4.2e-115	55.1
WP_150121929.1\|2115821_2117567_-	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041808687.1\|2117891_2118425_-	hypothetical protein	NA	NA	NA	NA
WP_060472434.1\|2118464_2118812_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_150121930.1\|2118830_2119100_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_190299886.1\|2119093_2119270_-	hypothetical protein	NA	NA	NA	NA
WP_082990773.1\|2119348_2120518_-	MFS transporter	NA	NA	NA	NA
WP_060472437.1\|2120731_2121028_-	hypothetical protein	NA	NA	NA	NA
WP_060472438.1\|2121141_2121435_-	hypothetical protein	NA	NA	NA	NA
WP_060472439.1\|2123017_2123680_+	serine dehydratase	NA	NA	NA	NA
WP_060472440.1\|2123695_2124577_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_060472647.1\|2124581_2124908_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_060472648.1\|2126700_2127321_+	C39 family peptidase	NA	NA	NA	NA
WP_054607281.1\|2127434_2127668_+	hypothetical protein	NA	NA	NA	NA
WP_060472441.1\|2127711_2128566_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_060472442.1\|2128565_2129246_-	hypothetical protein	NA	NA	NA	NA
WP_060472443.1\|2130341_2130554_+	hypothetical protein	NA	NA	NA	NA
WP_060472444.1\|2131108_2133220_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_150121931.1\|2133774_2134002_-	hypothetical protein	NA	NA	NA	NA
WP_060472446.1\|2134119_2134977_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_060472447.1\|2135119_2136301_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_060472448.1\|2136540_2137785_-	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_060472449.1\|2137876_2138851_-	hypothetical protein	NA	NA	NA	NA
WP_060472450.1\|2138901_2140080_-\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2172387 : 2224265

unidentified_phage(14.29%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060472478.1\|2172387_2173437_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.1e-46	34.3
WP_060472479.1\|2173494_2174832_-	SLAP domain-containing protein	NA	NA	NA	NA
WP_060471001.1\|2175039_2176317_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060472480.1\|2176411_2177407_-	galactose mutarotase	NA	NA	NA	NA
WP_060472481.1\|2177525_2178989_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_060472482.1\|2179010_2180177_-	galactokinase	NA	NA	NA	NA
WP_060471693.1\|2180741_2181920_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_082990777.1\|2183369_2184383_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_060472650.1\|2184450_2185089_+	carbonic anhydrase family protein	NA	NA	NA	NA
WP_060472483.1\|2185103_2185574_+	DUF4065 domain-containing protein	NA	NA	NA	NA
WP_082990778.1\|2185818_2186436_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_060472484.1\|2186685_2188029_-	PFL family protein	NA	NA	NA	NA
WP_014919426.1\|2188041_2188311_-	ACT domain-containing protein	NA	NA	NA	NA
WP_060471558.1\|2191518_2192127_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.6e-33	42.6
WP_060472485.1\|2193106_2195023_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_060472489.1\|2197351_2198359_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_060472490.1\|2198603_2200490_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	4.8e-94	33.5
WP_060472491.1\|2200473_2201430_+	beta-galactosidase	NA	NA	NA	NA
WP_060472492.1\|2201534_2202527_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	5.3e-52	38.4
WP_060472493.1\|2202663_2203002_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_060472494.1\|2203044_2203695_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_082990779.1\|2205380_2206643_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	8.8e-60	36.6
WP_060472496.1\|2206949_2207939_-	hypothetical protein	NA	NA	NA	NA
WP_060472497.1\|2208039_2208945_-	hypothetical protein	NA	NA	NA	NA
WP_060471015.1\|2209757_2210936_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472498.1\|2211051_2211330_-	hypothetical protein	NA	NA	NA	NA
WP_060472499.1\|2211582_2212920_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_060472500.1\|2214096_2215017_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_060472501.1\|2215095_2215497_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_003627075.1\|2215555_2215783_-	YqgQ family protein	NA	NA	NA	NA
WP_060472502.1\|2215783_2216464_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003627079.1\|2216484_2217045_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_060472503.1\|2217094_2217244_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_060472504.1\|2217320_2219429_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_060472505.1\|2219519_2222111_+	YfhO family protein	NA	NA	NA	NA
WP_060472506.1\|2222218_2223142_+	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_082990780.1\|2223233_2224265_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.8e-32	38.0

DBSCAN-SWA_23

2227360 : 2296641

Bacillus_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060472509.1\|2227360_2229775_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_060472510.1\|2229778_2230828_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	5.3e-34	37.3
WP_060472511.1\|2231112_2231463_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_060472512.1\|2231574_2232342_-	RNA methyltransferase	NA	NA	NA	NA
WP_060472513.1\|2232439_2232712_+	acylphosphatase	NA	NA	NA	NA
WP_060472514.1\|2232758_2233721_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_003627102.1\|2233770_2234259_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_060472515.1\|2234295_2235855_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_060472516.1\|2235841_2236558_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.8e-25	29.6
WP_060472517.1\|2236721_2237276_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_060472518.1\|2237277_2238429_-	nucleotidyltransferase	NA	NA	NA	NA
WP_003627111.1\|2238434_2238782_-	ribosome silencing factor	NA	NA	NA	NA
WP_060472519.1\|2238803_2239397_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	NA	NA	NA	NA
WP_060472520.1\|2239377_2240043_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_025283797.1\|2240053_2241163_-	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA
WP_014563231.1\|2241155_2241680_-	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA
WP_060472521.1\|2241824_2242181_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_060472522.1\|2242224_2242425_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_082990781.1\|2242446_2242980_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.8e-14	38.2
WP_082990782.1\|2246859_2247027_-\|transposase	transposase	NA	NA	NA	NA
WP_060472524.1\|2247439_2247694_-	hypothetical protein	NA	NA	NA	NA
WP_060471015.1\|2248424_2249603_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472525.1\|2251438_2252617_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472526.1\|2253426_2253948_-	hypothetical protein	NA	NA	NA	NA
WP_060472527.1\|2254105_2256040_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.4e-96	33.7
WP_060472528.1\|2256330_2257239_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	1.8e-27	28.8
WP_060472529.1\|2257270_2258602_-	DnaD domain protein	NA	NA	NA	NA
WP_060472530.1\|2258604_2259072_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_060472531.1\|2259074_2259677_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_060472532.1\|2259673_2260504_-	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	7.1e-18	25.9
WP_060472533.1\|2260512_2263176_-	DNA polymerase I	F8WQ35	Bacillus_phage	1.2e-61	30.5
WP_060471001.1\|2263417_2264695_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060472534.1\|2266153_2266576_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_060472535.1\|2266686_2267946_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_060472538.1\|2270110_2271148_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F0L1	Synechococcus_phage	3.2e-60	41.2
WP_060472539.1\|2271149_2272601_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-56	33.0
WP_060472540.1\|2272585_2274805_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.2e-142	39.4
WP_060472541.1\|2274801_2275473_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_060472542.1\|2275469_2275724_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_060472543.1\|2275724_2276441_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SPE1	Cyanophage	2.4e-38	38.7
WP_060471001.1\|2278253_2279531_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.0
WP_060472544.1\|2279647_2280823_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_060472545.1\|2280788_2281274_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.1e-22	45.8
WP_060472546.1\|2281285_2282947_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_060472547.1\|2283145_2284021_-	SPFH domain-containing protein	NA	NA	NA	NA
WP_060472548.1\|2284036_2284354_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_082990783.1\|2284858_2286082_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.6e-122	58.3
WP_060471015.1\|2286377_2287556_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_060472552.1\|2288380_2289955_+	M1 family metallopeptidase	NA	NA	NA	NA
WP_060472553.1\|2290017_2291331_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_190299887.1\|2292063_2292237_-	hypothetical protein	NA	NA	NA	NA
WP_060472556.1\|2294930_2295578_-\|tRNA	DUF4479 and tRNA-binding domain-containing protein	NA	NA	NA	NA
WP_060472557.1\|2295597_2295918_-	thioredoxin family protein	NA	NA	NA	NA
WP_060472558.1\|2295987_2296641_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP012890.1|WP_060472282.1|1895147_1895348_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP012890.1|WP_060472282.1|1895147_1895348_-|hypothetical-protein

1895147_1895348_-

66 aa aa

1867192-1911159

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP012890_1	TypeV	1.37\|1914307\|34\|NZ_CP012890\|CRT,PILER-CR	1914307-1914340	34	1893584-1893551	0
NZ_CP012890_1	TypeV	1.39\|1914439\|34\|NZ_CP012890\|CRT,PILER-CR	1914439-1914472	34	1893625-1893592	2
NZ_CP012890_1	TypeV	1.41\|1914571\|36\|NZ_CP012890\|CRT,PILER-CR	1914571-1914606	36	1892397-1892362	1
NZ_CP012890_1	TypeV	1.53\|1912641\|34\|NZ_CP012890\|CRISPRCasFinder	1912641-1912674	34	1867224-1867191	2
NZ_CP012890_1	TypeV	1.78\|1914307\|33\|NZ_CP012890\|CRISPRCasFinder	1914307-1914339	33	1893584-1893552	0
NZ_CP012890_1	TypeV	1.82\|1914571\|35\|NZ_CP012890\|CRISPRCasFinder	1914571-1914605	35	1892397-1892363	1

1. spacer 1.37|1914307|34|NZ_CP012890|CRT,PILER-CR matches to NZ_CP012890 position: 1893584-1893551, mismatch: 0

ttggaaacgtacacacgagtacaattatcaaata	CRISPR spacer
ttggaaacgtacacacgagtacaattatcaaata	Protospacer
**********************************

2. spacer 1.39|1914439|34|NZ_CP012890|CRT,PILER-CR matches to NZ_CP012890 position: 1893625-1893592, mismatch: 2

acaaaaagtgatggtaatgactccatccattatt	CRISPR spacer
acaaaaagtgatggtaatgactccatcaattgtt	Protospacer
*************************** ***.**

3. spacer 1.41|1914571|36|NZ_CP012890|CRT,PILER-CR matches to NZ_CP012890 position: 1892397-1892362, mismatch: 1

gtctggattcttacatttataaggaggactgttaat	CRISPR spacer
gtctggattcttacatttataaggaggaatgttaat	Protospacer
**************************** *******

4. spacer 1.53|1912641|34|NZ_CP012890|CRISPRCasFinder matches to NZ_CP012890 position: 1867224-1867191, mismatch: 2

tcacaggcaaccgagcctatatcgtcttataatt	CRISPR spacer
tcacaggcaaccgagcctatatcgtgctataatt	Protospacer
************************* .*******

5. spacer 1.78|1914307|33|NZ_CP012890|CRISPRCasFinder matches to NZ_CP012890 position: 1893584-1893552, mismatch: 0

ttggaaacgtacacacgagtacaattatcaaat	CRISPR spacer
ttggaaacgtacacacgagtacaattatcaaat	Protospacer
*********************************

6. spacer 1.82|1914571|35|NZ_CP012890|CRISPRCasFinder matches to NZ_CP012890 position: 1892397-1892363, mismatch: 1

gtctggattcttacatttataaggaggactgttaa	CRISPR spacer
gtctggattcttacatttataaggaggaatgttaa	Protospacer
**************************** ******

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012890

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information