CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN879547	Comamonas thiooxydans isolate C19 chromosome I	1 crisprs	Cas9_archaeal,DEDDh,RT,csa3,cas4,DinG,cas3	0	0	5	0
NZ_LN879548	Comamonas thiooxydans isolate C19 plasmid II	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN879547_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN879547_1

476457-476562

Orphan

Consensus_repeat	Method
GGTGGCGAGCGTCAAGAGCGCAGCTTCG	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_LN879547_1

>merge|NZ_LN879547|1|476457-476562|CRISPRCasFinder
GGTGGCGAGCGTCAAGAGCGCAGCTTCGAGCGTCGTGATGATCGCGGCAGCTTTGGTGGCGATCGCGGCGGTTTCCGTGGTGGCGAGCGTCAAGAGCGCAGCTTCG

>NZ_LN879547|1|1|476457-476562|CRISPRCasFinder
GGTGGCGAGCGTCAAGAGCGCAGCTTCG	AGCGTCGTGATGATCGCGGCAGCTTTGGTGGCGATCGCGGCGGTTTCCGT
GGTGGCGAGCGTCAAGAGCGCAGCTTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN879547.1\|WP_057091607.1\|470129_471020_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381617
NZ_LN879547.1\|WP_003067838.1\|467756_468143_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_LN879547.1\|WP_057091609.1\|481196_481844_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
NZ_LN879547.1\|WP_057091611.1\|483572_484745_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_LN879547.1\|WP_003067798.1\|491296_492127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN879547.1\|WP_012837213.1\|478941_479820_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_LN879547.1\|WP_003067842.1\|466213_466783_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_LN879547.1\|WP_057091614.1\|489060_491064_-\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|225752
NZ_LN879547.1\|WP_012837206.1\|466837_467617_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_LN879547.1\|WP_003067828.1\|472155_472494_-\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|234845
NZ_LN879547.1\|WP_057091608.1\|472513_473815_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320702
NZ_LN879547.1\|WP_171832565.1\|484806_486333_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_LN879547.1\|WP_046460312.1\|471163_472150_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_LN879547.1\|WP_003067836.1\|468253_468952_+\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
NZ_LN879547.1\|WP_057091610.1\|481950_483447_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_LN879547.1\|WP_057091613.1\|486515_488993_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|236976
NZ_LN879547.1\|WP_003076776.1\|473929_474454_+\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_LN879547.1\|WP_003067818.1\|477020_478253_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_LN879547.1\|WP_003067835.1\|468999_469983_+\|CobD/CbiB-family-protein	unknown	unknown	gnl\|CDD\|236068
NZ_LN879547.1\|WP_003067812.1\|480019_480997_-\|GMP-reductase	unknown	unknown	gnl\|CDD\|235479

Protein	Function_ID	Function_description	E-value
NZ_LN879547.1\|WP_057091607.1\|470129_471020_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381617	cd16896, LT_Slt70-like, uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	2.5843e-39
NZ_LN879547.1\|WP_003067838.1\|467756_468143_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.40851e-68
NZ_LN879547.1\|WP_057091609.1\|481196_481844_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	6.77665e-24
NZ_LN879547.1\|WP_057091611.1\|483572_484745_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	2.02058e-100
NZ_LN879547.1\|WP_012837213.1\|478941_479820_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	2.20163e-94
NZ_LN879547.1\|WP_003067842.1\|466213_466783_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.06648e-68
NZ_LN879547.1\|WP_057091614.1\|489060_491064_-\|DUF839-domain-containing-protein	gnl\|CDD\|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	6.92963e-12
NZ_LN879547.1\|WP_012837206.1\|466837_467617_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.25327e-135
NZ_LN879547.1\|WP_003067828.1\|472155_472494_-\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	5.55213e-43
NZ_LN879547.1\|WP_057091608.1\|472513_473815_-\|M48-family-metallopeptidase	gnl\|CDD\|320702	cd07343, M48A_Zmpste24p_like, Peptidase M48 subfamily A, a type 1 CaaX endopeptidase. This family contains peptidase family M48 subfamily A which includes a number of well-characterized genes such as those found in humans (ZMPSTE24, also known as farnesylated protein-converting enzyme 1 or FACE-1 or Hs Ste24), Taenia solium metacestode (TsSte24p), Arabidopsis (AtSte24) and yeast (Ste24p). Ste24p contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is thought to be intimately associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. Ste24p is involved in the post-translational processing of prelamin A to mature lamin A, a major component of the nuclear envelope. ZmpSte24 deficiency causes an accumulation of prelamin A leading to lipodystrophy and other disease phenotypes, while mutations in this gene or in that encoding its substrate, prelamin A, result in a series of human inherited diseases known as laminopathies, the most severe of which are Hutchinson Gilford progeria syndrome (HGPS) and restrictive dermopathy (RD) which arise due to unsuccessful maturation of prelamin A. Two forms of mandibuloacral dysplasia, a condition that causes a variety of abnormalities involving bone development, skin pigmentation, and fat distribution, are caused by mutations in two different genes; mutations in the LMNA gene, which normally provides instructions for making lamin A and lamin C, cause mandibuloacral dysplasia with A-type lipodystrophy (MAD-A), and mutations in the ZMPSTE24 gene cause mandibuloacral dysplasia with B-type lipodystrophy (MAD-B). Within cells, these genes are involved in maintaining the structure of the nucleus and may play a role in many cellular processes. Certain HIV protease inhibitors have been shown to inhibit the enzymatic activity of ZMPSTE24, but not enzymes involved in prelamin A processing.	0
NZ_LN879547.1\|WP_171832565.1\|484806_486333_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	9.97305e-130
NZ_LN879547.1\|WP_046460312.1\|471163_472150_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.62791e-113
NZ_LN879547.1\|WP_003067836.1\|468253_468952_+\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	1.9881e-68
NZ_LN879547.1\|WP_057091610.1\|481950_483447_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	2.82288e-98
NZ_LN879547.1\|WP_057091613.1\|486515_488993_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|236976	PRK11773, uvrD, DNA-dependent helicase II; Provisional.	0
NZ_LN879547.1\|WP_003076776.1\|473929_474454_+\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	4.02388e-123
NZ_LN879547.1\|WP_003067818.1\|477020_478253_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.19289e-93
NZ_LN879547.1\|WP_003067835.1\|468999_469983_+\|CobD/CbiB-family-protein	gnl\|CDD\|236068	PRK07630, PRK07630, CobD/CbiB family protein; Provisional.	7.12615e-113
NZ_LN879547.1\|WP_003067812.1\|480019_480997_-\|GMP-reductase	gnl\|CDD\|235479	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional.	0

>NZ_LN879547.1|WP_003076776.1|473929_474454_+|oligoribonuclease
MVWLDCEMTGLNPDRDRIIEIAVVVSSSDLQIRVEGPVFAIHQSDELLGGMDAWNKGTHGKSGLIDKVKASTISEAEAEAALIAFLGKYVPKGKTPLCGNSIGQDRRFMERYMPKLNNFFHYRNIDVSTLKELAKRWKPEAYTSFKKAQRHTALADVHESIDELQHYRQQLLSV
>NZ_LN879547.1|WP_057091608.1|472513_473815_-|M48-family-metallopeptidase
MASRLDFTLALSLLFATAVALQWLLRVWLVSRQVRHVATHRDAVPPAFAHRISLSAHQKAADYTLAKARVSLIDITLSAAVLLCWTLLGGLDWLNRWLLEFINPGLWQQLALLASFAVISALIELPLSLYQTFRLEQRFGFNQMTPGLWLADLLKSTLVGAIIGLPLAALILWLMGSTGPLWWLWAWGAWTAFNLLLMWIFPSFIAPLFNKFEPLADESLKSRVTRLMERCGFAAKGLFVMDGSRRSAHANAYFTGFGNSKRVVFFDTLLRQLSPGEVEAVLAHELGHFKHKHISKRMVLMFGVSLLGFALLGWLSQQLWFYTGLGVSVLLGPNIDVAAENNALALLLFMLAVPVFSFFVTPLMSAMSRRDEFEADAYAMQQADGAQLASALLKLYEDNASTLTPDPWYVSFYYSHPPAVDRLARMPAPAGSL
>NZ_LN879547.1|WP_003067828.1|472155_472494_-|4a-hydroxytetrahydrobiopterin-dehydratase
MSTPTLQQKDWSQLKRSALSTEQVQEQLATLEGWELLAGNAAISKTFRFVNFYETMAFVNALALIAHQQDHHPDLEVGYNRCKVSLNTHDVGGISETDIDCARRIEALLNPA
>NZ_LN879547.1|WP_046460312.1|471163_472150_-|ribosome-small-subunit-dependent-GTPase-A
MAKQGRRPGAQATGDTQTGLVVASYGRHCVVETPDGERRICHPRGKKSQAVVGDHVQWLAPPPGQGDEGTIEKIVERRNVFYRQDDIRTKTFAANLDQLLILIAAEPVFSEVQLARALIAAEAAHIKPIIALNKMDLEEPFLRAWQRLEPYRTMRDAANAAPHYMVLPLSLEDADDEDRDAIIGLLQGKTTLVLGPSGVGKSTLINLLLPDAKVATNEISQALNTGKHTTTSTTLYWVDEARTTAIIDSPGFQEFGLYHIAATQLAACMPDIGALADQCKFYNCTHLHEPGCAVMAQVEAQDSPHSISANRYRIYGELFDELSQEPRY
>NZ_LN879547.1|WP_057091607.1|470129_471020_-|transglycosylase-SLT-domain-containing-protein
MKPRVFQPCLQAALAVALYAGMSLAWAQGTDSAPSWEDEPPTLSRWIEEGYKAELSRQPWRAAQRYCAAARYGSLEAQYRLGRLLLLGRGLTPDPATGTTLLALAAQRGHEKARLLLAGKLPGDRLPDCLTQGDAPAQEFLEASQEAVPHEVVASYVSSLPREKRRMAELVQRLAPRFSIDPRLALAIVRSESNFEAQALSPRNAQGLMQLIPETAERFGVRDAWNPEQNVRGGLAYLRWLLERFEGDVALVSAAYNAGERTVQQYGGVPPYAETREYVRRILSFYRAKRHERPAR
>NZ_LN879547.1|WP_003067835.1|468999_469983_+|CobD/CbiB-family-protein
MSFFAILIALLLEQARPLARSNLVQAGYRAWTVTVRSNFDAGKPHHGWLAWAMAVLLPSVIVLGIFWALMEFIGWPAAMLWNVAVLYVTLGFRQFSHHFTRIRDALDAGDEFAARQALADWQQVDASEVPRSEVVRHVIEYSVLAAHRHVFGVLFWFSILSALGLGPLGAILYRMAEYLSRAWSRKGAEGLRAPTSERLQSAAAKAWYVIDWLPARLTALSFAMVGSFEEAIDNWRVYAQRFPNDNDGVILAATAGAINVRLGGEALRRRDAADGEEGDDAQWTGSDVTPGREPEMAHLRSVVGLVWRSVVVWLLLLALLTFARLLG
>NZ_LN879547.1|WP_003067836.1|468253_468952_+|CoA-pyrophosphatase
MPASDNSSLPVVGIVDPRKARLLGIDSQLPAVPLAAQTPQALRTRFAQPPQWLPEAMQEKRITAKQPSDAAVLVPIVMREQPTVLLTVRSARLSTHSGQVAFPGGKRDPQDVSAEATALREAHEEVGLAPKNVEVLGRLPIYVTGTAFHITPVVALVHPQASYFPNPGEVADLFEVPLSYLLNPAHHERHAMLWQGVDREWFAMPYQDGEQQRYIWGATAGMLRNLYRFLAA
>NZ_LN879547.1|WP_003067838.1|467756_468143_+|50S-ribosomal-protein-L19
MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYSPLIAKIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRVNKTAAAAE
>NZ_LN879547.1|WP_012837206.1|466837_467617_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRFDIITLFPELFAPFLESGVTRRAYSSGQVAVHLWNPRDWAEGNYRRVDDRPFGGGPGMVMMAEPLQRCLEAIRSARAEVDAQEQAEPAPVVLFSPIGTTLKHAVVADWAESRGAVLLCGRYEGIDQRFIDRNVTHQLSLGDFVLSGGELAAMVLLDSLARLQPGVLNDEGSFQQDSFNPALDGLLDCPHYTRPEVWNDQEVPAALLSGHHSNIERWRRDQRLSITAEHRPELIEQAREQGLLNAKDEGFLAKTASKL
>NZ_LN879547.1|WP_003067842.1|466213_466783_+|ribosome-maturation-factor-RimM
MSHMPVLQATSLPADAIEVGRIADAWGIKGWFKVHAFSSAPEALFAAKDWFLQPAEKGAKHFTGTVVLPVKQARFHADTIVATSLEVADRNAAEALRGARVFVAREHFPKTEDGEFYWVDLMGLNVVNREGVTLGVVKDLMATGPQTVLVLGYEQDGKEQERLIPFVDAYVDSVDLAGKKIVADWQPDY
>NZ_LN879547.1|WP_003067818.1|477020_478253_-|multidrug-effflux-MFS-transporter
MQNDLSTFWRGPRWTLAMLLAILGMLGPFSVDTYIPAFSGIAKALGATPVEMQQTLSAYLLGFAFMNLFHGALADSFGRRPVILWGLVMFTIASAGCALSQNITQLVIFRTLQGLSTGAGIVVSRAIVRDIFPPTQAQGVMAQITIFFGVAPALAPVIGGWLFVHLSWQAVFWFLSIVGVLLWLINVKFLPESLPPQKRQPFQFRPLMQGYGILLTDPRFLLLALASGIPFNGMFLYLLSAPAFLGDILQLEPTQFFWFFIATIGGIMAGSWTSGRLAGRIPPKRQIRHGFLVMCVTSIINLVANLIWPAHVSWALIPISLFAYGWALMVPVVTLLVLDIHPARRGLASSLQAVVGSVANGFVAGVIAPLVMHSAALLATGSILMMLIGLVAWIYLHHHWPDIGRHASEH
>NZ_LN879547.1|WP_012837213.1|478941_479820_-|NAD(P)-dependent-oxidoreductase
MNTLKIAVLGTGMMGLPMARRLAQAGHEVHVWNRTRAKAEPLAADGVSIHDSAADAVRGVDFAVSLLESGAIVGEVLFTLGVADAMPKGSLFIDMASIQPREAREHAGKLAALGVRHLDAPVSGGTLGAQAGTLAIMAGGEAADFEHALPVFAALGRATHVGPHGAGQLAKLANQMIVGITIGAVAEALLLAERGGADPAKVREAISGGFADSRILQVHGERMVKHDFAPRGRMTVQLKDMRNAIATAEEVGFDAPITGLLEQLYAEGVKNGLGDLDQAGLFVELQRRNALD
>NZ_LN879547.1|WP_003067812.1|480019_480997_-|GMP-reductase
MEIFDYDNILLLPRMCRVESRSECDTSVVLGNLSFKLPVVPANMKTVVDEKICTYLAQNGFFYVMHRFDIDNVAFTKDMQSKGLFASISLGVKQPDYETVDRFVADGICPEYITIDIAHGHAESVKNMIAYIKAKIPAAFVIAGNVATPEAVIDLENWGADATKVGVGPGKVCITKLKTGFGTGGWQLSALKWCARVATKPIIADGGIRSHGDIAKSIRFGATMVMIGSLFAGHEESPGKTVEVDGQLFKEYYGSASDFNKGEYKHVEGKRILEPVKGPLMNTLVEMQQDVQSSISYSGGTKLMDIRKVNYVILGGDNAGEHLLM
>NZ_LN879547.1|WP_057091609.1|481196_481844_-|TetR/AcrR-family-transcriptional-regulator
MRTKTEEKRQAIIDVAAATFGELGFERTSMSEICTRLGGSKATLYNYFPSKEALFLEVMFQASEADFQNTMLALQTGNDDAAQTLRNFGQRFLGLLYSPEVMSVRRLLVSEGGRANIGQRCWDMGPARGNAAINAFLQQGIERRLLRNADTEVMRHHLLALLEAELLPRFMFQHLPAPTAQEIALCTERAVDAFMRVYGTPGDTQSKSDAIRKSL
>NZ_LN879547.1|WP_057091610.1|481950_483447_+|efflux-transporter-outer-membrane-subunit
MTQCIAAAPQRIRRGRHGWWVLGLPAVLAACAQIPEWEGKAMLAQPVPETLQAASHAPPMDWPTQQWWQRYGDAQLDQLIAEAMEGAPDMAAAAARVQQARAMLGVSEAASAPQLSARASVSEDKLSYNHLTPEAFAPRGMNDYGRATLDLSWSLDLWGKQRAAVAAAAGELAAREADAAQARLVLSSNVALAYAQLLRLAANAQTLEQSVQVRRTTAGLFEQRYANGLENQGSVHSARARLAAAQAELAQMQEQVGLQRNSIAALIGAAPDRGAAIVLDAGRLQSPWQQQWALPQHLPAHLLGRRPDVVAARLQAQALESRVASQQAEFYPDVNLSAFVGVQSLGLDMLTRSGSGIASVGPAVSLPIFNGGRLRSQLGAARARYDEAVAQYRSTLNRALQEVADNSVSQRALQQQLTAMQQAVTAATEAHRVARNRYEGGLARYLDVLSAEDQLLASVRQLVDVQSRALTLDIGLHRALGGGWSESAGVQHAALSKA
>NZ_LN879547.1|WP_057091611.1|483572_484745_+|HlyD-family-secretion-protein
MTENASSVSANPAVREQRRNRLLAGLAGVVLLGGAGAGAYWWLHASRFVSTDNAYAAAEVAQVTPSIGGTVLEVLVRDTQAVKQGDVLLRIDPTDARLALAQAEAELARAMRRVKGYVANDGGLKAQVTAREADEKRAAAQLLAAEADMERATIDLQRRQALARSGSVSGEELTQAQNAFAAAKAQLASAVAAQAQARANREAAIGAKQVNATLIEGADAQSNPEVQLAQARRDQAQVDLDRSTVRAPVDGVVARRSVQIGQRVQAGAPLMTVVPVQRIYVDANFKEGQLGKVRVGQRVQLQSDLYGSDVKYSGTVVGFSGGSGSAFAAIPAQNATGNWIKVVQRLPVRIQLDAAELARNPLRVGLSMQVTVDTRSGPADAAGVATTAAQ
>NZ_LN879547.1|WP_171832565.1|484806_486333_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MAAGMVPLTGGTLWLAALVLAAANFMAVLDMTVANVSVPSIAGNLGATTSQGTWVITSYAVAEAITVPLTGWLAARFGAVRVFATAMGLFGLASLLCGLANSLGMLVFARILQGLAGGPLMPLSQSLLLRIFPPRMAPAAIGLWSMTTLIAPVLGPIVGGWICDEYTWHWIFLINIPVALVCAFAVWHLVRRYEQPLLKNPIDTVGLILLIVWVGSLQLMLDEGKNLDWFASPLIVALAVVAVVGFAAFMIWELHAEHPIVDLRVFRHRGFSMAVLTISLAFAAFFAVNVLTPLWLQSFMGYTATLAGLVTAWTGLFALFVAPAAAGLAARVDPRRLIFGGVFWMGVITFWRAFATTDMGYWDIALPLMFMGLGLPFFFIPTTGLALASVEPQEMDNAAGLMNFLRTLSGAAAVSVVNTAWENGTTRKHADLVGLSDASGEVLHGLQQSGMSPDAALSALDQLITSQSVMLATNQIMFIIAGGFVLAACAIWLAPRPSRTVEPGAGGH
>NZ_LN879547.1|WP_057091613.1|486515_488993_+|UvrD-helicase-domain-containing-protein
MFPIDLLDSAPDGANSGANPASHSPLLTGLNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQTGQATPGSIMAVTFTNKAAKEMLTRLSAMLPYNVRGMWIGTFHGLCNRLLRAHYQAAKLPRAFQILDTQDQLSAIKRLCKQFNVDDERFPPKQLMYFIAGCKEEGMRPGDVVATDPDTRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDDAHLRHHYQRRFQHILVDEFQDTNKLQYQWLKQLAGDDVGGRYESAASVIAVGDDDQSIYAFRGARVGNMADFIREFDVKNQIKLEQNYRSYSNILDCANALISHNSNRLGKNLRTSQGPGEPVRIYEAPSDLAEAAWMVDEIKQLVRNDGFTRQEIAVLYRSNAQSRVIESALFNSKIPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFLRVVNFPARGIGARTIEVLQDTARSSGTSLSDAVTAVGGTAGTKLQGFVAQIDVLREQTQGRTLREIIETVEEQSGLIEHYRNEKEGADRIENLQELVTAAESFVTQEGFGRDAVAMPLDEQQNAPQLSQSPVSQGLDPNQPLLDEALKAPAGTAASMVNADTGETLSPLQAFLVHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGVEEGLFPHENAMMDRGGLEEERRLAYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPEEALKWITPRQSGFGSFAPSSGTGGAWGARAGGQYGSGWGGKQSEVFASPPVPQQKAEPAHGIKAGIAVFHNKFGEGKVLAVEGSGDDARAQVSFGRHGTKWLALAIAKLTIVD
>NZ_LN879547.1|WP_057091614.1|489060_491064_-|DUF839-domain-containing-protein
MAQNLLSRRKALQLFSGAPLLPLGSVVSASSLLAACGGGDDDNTTPTTPPVTKNYVSATFTSMAAPTLSTPANMATMYAASQLKVAFDDKSEQVYDLGYQPFFVTGDMVSNGKGDQVLAGGYYDIYNNKIIDKTVSGKERHFFSDSPDGTSLLTVPDAKVDGVKGKPVFAVVQFEYTTWAQDGTTDMYGKLPSPIAVLTLDQDQTTGKLSLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEPDAFSIGTNTMFQAYSENLYGDKNKANPYHYGHMPEVIVNVDGTATIKKHFCMGRISHELVQVMPDQRTALMGDDATNSGYFVFVADKEKDLSSGTLYAAKVGAGFSIDPAAKSAAPLTWIKLGSATSAEIENLANTLKPADIMTVVKTDPSDSSYTKIVANGKTEWIKINAGMDKAAAFLETHRYAAFKGASLGFTKMEGTTVNAKDKIAYSALQNVQSSMVAGNAANVPGNGVSVPKQLVAGVVMALNLKGGQKDTTGTAINSEWMPVDTAPLLAGEDLLDSDGKTLKGDALGNTANPNKIANPDNLKFSEKMRTLFIGEDSSQHVNNFMWAYNVDTKQLSRVLSVPAGGESTGLHAVDEINGWTYIMSNFQHAGDWGGIHANVKTQLDPLIKANYKDKFGSAVGYITASPAQMKLSAK
>NZ_LN879547.1|WP_003067798.1|491296_492127_-|hypothetical-protein
MKLQIVPPGTGLQWVLQGLRTFKSQPLALAALFFLGMASMSLISALPLIGPVIALALLPCISLTMMVAASEAAHGRKPTPALLLVAFRSGSQHLHSMLMLGGLYAAGFLLIIGASSLVDGGTFASVYLGQTPMTRELAEEPEFQSAMWLSMFLYLPLSLAFWHAPALIHWHGISPVKSLFFSFVGCIRNIGAYLVFGVCWIGVFIVSGMALAIVTGILAMLIGSIAGGLMVATALMLAAIFFTSIVFTFRDSFSPPDDDQTLIDSSSGTAPPSSDS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2058382 : 2114301

Micromonas_sp._RCC1109_virus(22.22%)

transposase,integrase,protease

attL 2111960:2111976|attR 2115412:2115428

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034349666.1\|2058382_2058748_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.8e-11	38.5
WP_057092200.1\|2058810_2061135_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	9.2e-172	42.6
WP_028240170.1\|2061380_2062580_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_043549497.1\|2062893_2063277_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_043549496.1\|2063260_2063563_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_043549493.1\|2063595_2063805_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_057092201.1\|2063829_2065731_-	ATP-binding protein	NA	NA	NA	NA
WP_057094673.1\|2065711_2066776_-	SIR2 family protein	NA	NA	NA	NA
WP_043549484.1\|2067045_2068338_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_015476707.1\|2068366_2068558_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_043549483.1\|2068931_2069441_+	DNA repair protein RadC	NA	NA	NA	NA
WP_052167759.1\|2069468_2070569_-	hypothetical protein	NA	NA	NA	NA
WP_043549481.1\|2071137_2071962_+	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	1.8e-42	41.4
WP_043549480.1\|2072040_2074092_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_043549479.1\|2074377_2074770_+	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_043549477.1\|2075572_2075887_+	DUF736 domain-containing protein	NA	NA	NA	NA
WP_057092202.1\|2075979_2076705_-	hypothetical protein	NA	NA	NA	NA
WP_043549476.1\|2076714_2077023_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_043549475.1\|2077263_2077614_+	DUF2958 domain-containing protein	NA	NA	NA	NA
WP_043549474.1\|2077923_2078685_+	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_043549472.1\|2078768_2079050_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_043549471.1\|2079076_2079934_+	replication initiator protein A	NA	NA	NA	NA
WP_043549470.1\|2080223_2080862_+	AAA family ATPase	B0ZSI1	Halomonas_phage	1.9e-31	40.6
WP_009523273.1\|2080858_2081143_+	hypothetical protein	NA	NA	NA	NA
WP_043549469.1\|2081139_2081673_+	DUF2840 domain-containing protein	NA	NA	NA	NA
WP_043549468.1\|2081669_2082257_+	S26 family signal peptidase	NA	NA	NA	NA
WP_057092203.1\|2082705_2084715_+	relaxase/mobilization nuclease and DUF3363 domain-containing protein	NA	NA	NA	NA
WP_015014856.1\|2084822_2085587_-	FCD domain-containing protein	NA	NA	NA	NA
WP_015014857.1\|2085941_2086907_-\|transposase	IS5-like element ISPsp3 family transposase	A0A077K814	Ralstonia_phage	2.6e-136	75.4
WP_015014858.1\|2087418_2088225_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_015014859.1\|2088227_2089178_+	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	3.6e-34	35.4
WP_015014860.1\|2089188_2090247_+	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	4.6e-46	34.0
WP_015014861.1\|2090265_2090676_+	BphX family protein	NA	NA	NA	NA
WP_171832575.1\|2090774_2092112_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_043566691.1\|2092297_2092864_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
WP_015014864.1\|2092881_2093211_+	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_015014865.1\|2093229_2094060_+	cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	4.2e-10	29.1
WP_015014866.1\|2094074_2094956_+	biphenyl-2,3-diol 1,2-dioxygenase	NA	NA	NA	NA
WP_015014867.1\|2094992_2095853_+	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	A0A249XU20	Mycobacterium_phage	2.6e-07	26.8
WP_081033949.1\|2095980_2096637_+	OmpW family protein	NA	NA	NA	NA
WP_015014869.1\|2096849_2098028_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_015014870.1\|2098321_2099266_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015014871.1\|2099262_2099541_+	EexN family lipoprotein	NA	NA	NA	NA
WP_015014872.1\|2099776_2101804_+	conjugal transfer protein TraG	NA	NA	NA	NA
WP_015014873.1\|2101800_2102277_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_057092205.1\|2102273_2103341_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_057092206.1\|2103337_2103730_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_057092207.1\|2103726_2103999_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_057092208.1\|2104011_2106462_+	conjugal transfer protein TrbE	NA	NA	NA	NA
WP_057092209.1\|2106458_2107202_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_057092210.1\|2107214_2107559_+	hypothetical protein	NA	NA	NA	NA
WP_057092211.1\|2107555_2108929_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_057092212.1\|2108959_2109664_+	conjugal transfer protein TrbF	NA	NA	NA	NA
WP_057092213.1\|2109660_2110671_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_057092214.1\|2110673_2111948_+	TrbI/VirB10 family protein	NA	NA	NA	NA
2111960:2111976	attL	NA	NA	NA	NA
WP_057092215.1\|2111978_2113340_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_057092216.1\|2113329_2114301_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2115412:2115428	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2391143 : 2400979

uncultured_Caudovirales_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019042282.1\|2391143_2392196_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	5.3e-34	31.0
WP_034359702.1\|2392241_2392592_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_019042281.1\|2392678_2393728_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	1.7e-85	56.8
WP_057094700.1\|2393747_2394932_-	MFS transporter	NA	NA	NA	NA
WP_003066626.1\|2394941_2395658_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.4e-99	76.4
WP_057092294.1\|2395644_2396076_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	5.4e-54	74.3
WP_046462182.1\|2396101_2397391_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.3e-172	76.5
WP_019042276.1\|2397513_2398020_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	4.0e-24	41.2
WP_029158336.1\|2398066_2398390_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_019042274.1\|2398513_2400979_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.3e-85	35.5

DBSCAN-SWA_3

3594498 : 3682696

uncultured_Caudovirales_phage(12.9%)

transposase,protease,tail,head,terminase,capsid,integrase,portal,tRNA

attL 3615334:3615352|attR 3686194:3686212

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057092865.1\|3594498_3595539_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.5e-92	51.5
WP_003079039.1\|3595625_3596081_-	CBS domain-containing protein	NA	NA	NA	NA
WP_046460876.1\|3596234_3596945_-	DUF937 domain-containing protein	NA	NA	NA	NA
WP_057092867.1\|3597110_3598157_-	porin	NA	NA	NA	NA
WP_057092869.1\|3598290_3599259_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_057092871.1\|3599309_3600029_-	hypothetical protein	NA	NA	NA	NA
WP_057092873.1\|3600025_3601144_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_057092876.1\|3601206_3602154_+	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	1.6e-05	43.4
WP_057092878.1\|3602212_3603232_+	DNA-binding protein YbiB	A0A2H4JBY5	uncultured_Caudovirales_phage	1.8e-23	31.1
WP_057092880.1\|3603241_3604042_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003053005.1\|3604100_3604580_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_057092882.1\|3604773_3606048_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_057092883.1\|3606137_3607142_-	BMP family protein	NA	NA	NA	NA
WP_003052999.1\|3607687_3607900_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_039049219.1\|3608084_3608531_+	GatB/YqeY domain-containing protein	NA	NA	NA	NA
WP_057092885.1\|3608638_3609574_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_046460883.1\|3609703_3610792_+	tartrate dehydrogenase	NA	NA	NA	NA
WP_057092887.1\|3610903_3611371_-	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_057092889.1\|3611510_3612446_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_057092892.1\|3612557_3613541_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_057092894.1\|3613588_3615118_+	altronate dehydratase	NA	NA	NA	NA
WP_057092895.1\|3615180_3616662_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
3615334:3615352	attL	NA	NA	NA	NA
WP_057092896.1\|3616875_3617679_+	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA
WP_057094765.1\|3617849_3620456_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	8.8e-14	31.5
WP_057092897.1\|3620721_3621636_-	EamA family transporter	NA	NA	NA	NA
WP_039049164.1\|3621748_3622303_-	hypothetical protein	NA	NA	NA	NA
WP_003069365.1\|3622397_3622751_+	hypothetical protein	NA	NA	NA	NA
WP_012839320.1\|3622808_3624230_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_034409367.1\|3624295_3624979_+	DUF615 domain-containing protein	NA	NA	NA	NA
WP_046460930.1\|3624971_3625589_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_003069356.1\|3625951_3627160_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_171832584.1\|3627463_3629335_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_057092898.1\|3629865_3630525_-	nitroreductase	NA	NA	NA	NA
WP_034363015.1\|3630709_3631930_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046460931.1\|3632061_3632721_-	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	1.3e-22	33.2
WP_012839329.1\|3632886_3633723_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_003069345.1\|3633759_3634560_-	RNA methyltransferase	NA	NA	NA	NA
WP_057092900.1\|3634817_3635738_+	inositol monophosphatase	NA	NA	NA	NA
WP_003069342.1\|3635944_3637018_+	sterol desaturase family protein	NA	NA	NA	NA
WP_081034014.1\|3637319_3637814_-	hypothetical protein	NA	NA	NA	NA
WP_057092904.1\|3637810_3638434_-	glycoside hydrolase family protein	I6NW41	Burkholderia_virus	3.8e-32	43.0
WP_057092906.1\|3638430_3638673_-	hypothetical protein	NA	NA	NA	NA
WP_145914945.1\|3638818_3639781_-	hypothetical protein	NA	NA	NA	NA
WP_171832536.1\|3639905_3640421_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-17	37.3
WP_171832537.1\|3640534_3640738_-\|transposase	transposase	NA	NA	NA	NA
WP_057092908.1\|3640943_3642995_-	hypothetical protein	H2BD96	Pseudomonas_phage	1.2e-10	58.1
WP_057092910.1\|3643078_3645763_-	hypothetical protein	A0A0H5ART3	Pseudomonas_phage	2.2e-185	40.9
WP_057092912.1\|3645662_3646139_-	hypothetical protein	J7HX80	Pseudomonas_phage	4.4e-20	41.5
WP_057092914.1\|3646135_3646627_-	DUF1833 family protein	A0A2H4J983	uncultured_Caudovirales_phage	1.1e-29	41.2
WP_081034086.1\|3646629_3647097_-	hypothetical protein	A0A286S298	Klebsiella_phage	5.2e-42	49.0
WP_057092918.1\|3647172_3647457_+	hypothetical protein	NA	NA	NA	NA
WP_057092920.1\|3647488_3650005_-\|tail	phage tail tape measure protein	A5H1M1	Xanthomonas_virus	1.6e-20	30.0
WP_057092921.1\|3650046_3650277_-	hypothetical protein	NA	NA	NA	NA
WP_057092923.1\|3650273_3650672_-\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_057092925.1\|3650668_3651175_-	hypothetical protein	A0A286S1Q8	Klebsiella_phage	3.5e-20	36.5
WP_057092927.1\|3651238_3651610_-	DUF3168 domain-containing protein	K7PHI9	Enterobacteria_phage	9.2e-26	47.9
WP_057092930.1\|3651606_3652077_-	HK97 gp10 family phage protein	A0A1V0E895	Vibrio_phage	1.9e-36	54.1
WP_057094767.1\|3652069_3652405_-\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	1.8e-28	61.3
WP_057092932.1\|3652404_3652617_-	hypothetical protein	NA	NA	NA	NA
WP_057092934.1\|3652687_3653227_-	hypothetical protein	NA	NA	NA	NA
WP_145914947.1\|3653230_3653512_-	hypothetical protein	NA	NA	NA	NA
WP_057092938.1\|3653559_3654867_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.7e-114	52.9
WP_057092940.1\|3654933_3655893_-	signal peptide peptidase SppA	A4JX00	Burkholderia_virus	6.6e-92	57.1
WP_057092942.1\|3655889_3657173_-\|portal	phage portal protein	A4JWZ9	Burkholderia_virus	7.2e-126	54.6
WP_057092944.1\|3657175_3657406_-	hypothetical protein	NA	NA	NA	NA
WP_057092946.1\|3657402_3659196_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	7.7e-110	39.9
WP_057092949.1\|3659158_3659686_-\|terminase	P27 family phage terminase small subunit	NA	NA	NA	NA
WP_057094768.1\|3659862_3660156_-	hypothetical protein	A0A2I6PIG1	Escherichia_phage	7.3e-26	54.8
WP_057092951.1\|3660615_3661041_-	hypothetical protein	NA	NA	NA	NA
WP_039049208.1\|3661043_3661319_-	hypothetical protein	NA	NA	NA	NA
WP_057092953.1\|3661764_3664497_-	virulence protein E	A0A2D1GN57	Marinobacter_phage	1.4e-57	37.1
WP_057092955.1\|3664577_3664871_-	hypothetical protein	NA	NA	NA	NA
WP_057092956.1\|3664867_3665389_-	hypothetical protein	B7SYH6	Stenotrophomonas_phage	4.3e-29	43.5
WP_003069265.1\|3665596_3665845_-	hypothetical protein	NA	NA	NA	NA
WP_057092958.1\|3665912_3666575_+	peptidase S24	A0A2H4J0J9	uncultured_Caudovirales_phage	4.8e-17	40.7
WP_171832538.1\|3667018_3667753_+	hypothetical protein	A0A2K5B271	Erysipelothrix_phage	7.9e-21	31.8
WP_057092963.1\|3667749_3668187_+	hypothetical protein	NA	NA	NA	NA
WP_057092967.1\|3668726_3669086_+	hypothetical protein	NA	NA	NA	NA
WP_057092969.1\|3669072_3669720_+	hypothetical protein	A0A2P1JT23	Streptomyces_phage	8.9e-08	30.4
WP_057092970.1\|3669716_3669926_+	hypothetical protein	NA	NA	NA	NA
WP_057092972.1\|3669922_3672244_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.7e-14	31.9
WP_057092974.1\|3672240_3672876_+	hypothetical protein	R9TN97	Rhizobium_phage	1.5e-15	55.6
WP_145914949.1\|3673007_3673277_+	hypothetical protein	NA	NA	NA	NA
WP_145914950.1\|3673273_3673669_+	hypothetical protein	NA	NA	NA	NA
WP_057092980.1\|3673665_3674190_+	hypothetical protein	NA	NA	NA	NA
WP_057092982.1\|3674192_3674504_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_057092984.1\|3674596_3675181_-	hypothetical protein	NA	NA	NA	NA
WP_057092986.1\|3675332_3676619_-\|integrase	tyrosine-type recombinase/integrase	C7BGE7	Burkholderia_phage	2.1e-109	46.8
WP_171832539.1\|3676861_3679453_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	7.6e-26	20.5
WP_057092990.1\|3679513_3681439_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_046460897.1\|3681712_3682696_+\|protease	proteasome-type protease	NA	NA	NA	NA
3686194:3686212	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4469345 : 4475379

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039050062.1\|4469345_4469897_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.1e-46	53.6
WP_057093628.1\|4469893_4470781_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-98	59.8
WP_057093629.1\|4470844_4471726_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	7.8e-23	33.2
WP_057093631.1\|4471722_4472793_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	4.9e-88	48.8
WP_034354584.1\|4472862_4473636_-	type III pantothenate kinase	NA	NA	NA	NA
WP_003068026.1\|4473806_4474277_+	peptidoglycan-binding protein LysM	A0A1V0DZX0	Clostridioides_phage	8.7e-05	37.5
WP_057093633.1\|4474356_4475379_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	6.4e-85	47.7

DBSCAN-SWA_5

4730213 : 4738382

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081034045.1\|4730213_4730951_-	uracil-DNA glycosylase	A0A0A7D988	Equid_alphaherpesvirus	4.7e-37	41.5
WP_003068351.1\|4731123_4731528_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012840109.1\|4731549_4732350_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	6.3e-64	52.5
WP_012840110.1\|4732342_4732504_-	hypothetical protein	NA	NA	NA	NA
WP_085960382.1\|4732500_4733541_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.1e-76	44.4
WP_057093846.1\|4733652_4734234_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.5e-64	63.4
WP_012840113.1\|4734238_4734568_-	chorismate mutase	NA	NA	NA	NA
WP_046461699.1\|4734564_4736064_-	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.5e-37	30.5
WP_057093848.1\|4736509_4737115_+	chalcone isomerase family protein	NA	NA	NA	NA
WP_057093851.1\|4737116_4738382_-	polyamine aminopropyltransferase	A0A1D7SEZ2	Cyanophage	2.7e-08	37.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage