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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013027 Escherichia coli strain 2009C-3133 plasmid unnamed3, complete sequence 0 crisprs RT,csa3 0 0 2 0
NZ_CP013026 Escherichia coli strain 2009C-3133 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP013024 Escherichia coli strain 2009C-3133 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP013025 Escherichia coli strain 2009C-3133 chromosome, complete genome 6 crisprs DinG,DEDDh,WYL,RT,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4 0 14 12 0

Results visualization

1. NZ_CP013025
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_1 210119-210210 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_2 1357741-1357873 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_3 3426195-3426711 Unclear I-E
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_4 3452413-3453356 TypeI-E I-E
15 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_5 4046293-4046388 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013025_6 4618893-4619016 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_CP013025_1 1.1|210145|40|NZ_CP013025|CRISPRCasFinder 210145-210184 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP013025_2 2.1|1357758|42|NZ_CP013025|PILER-CR 1357758-1357799 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 1 0.976
NZ_CP013025_2 2.2|1357817|40|NZ_CP013025|PILER-CR 1357817-1357856 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_CP013025_4 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453296-3453327 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_CP013025_6 6.1|4618936|38|NZ_CP013025|CRISPRCasFinder 4618936-4618973 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP022140 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence 27735-27766 6 0.812
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 213346-213377 6 0.812
NZ_CP013025_3 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3426224-3426255 32 MK448716 Streptococcus phage Javan249, complete genome 37558-37589 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_LT904880 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3 100861-100892 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_LT904895 Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2 32455-32486 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP012254 Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence 90639-90670 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029647 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence 24048-24079 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_LT904853 Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2 2158-2189 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NC_003385 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence 69550-69581 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029859 Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence 33422-33453 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029847 Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence 64890-64921 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029916 Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence 3001-3032 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029893 Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence 30210-30241 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029876 Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence 21803-21834 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029884 Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence 5429-5460 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029961 Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence 76887-76918 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029849 Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence 9632-9663 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029857 Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence 17697-17728 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029929 Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence 73527-73558 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029865 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence 87633-87664 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_LT883154 Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2 32810-32841 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029905 Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence 30728-30759 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029851 Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence 44207-44238 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP040567 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence 17468-17499 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029889 Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence 17968-17999 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029891 Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence 18575-18606 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029898 Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence 21136-21167 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029951 Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence 47286-47317 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029867 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence 33258-33289 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029901 Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence 32901-32932 8 0.75
NZ_CP013025_3 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT 3426468-3426499 32 NZ_CP029921 Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence 100446-100477 8 0.75
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 70246-70277 8 0.75
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NZ_CP032347 Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence 495160-495191 8 0.75
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NZ_CP041042 Paracoccus sp. AK26 plasmid pAK4, complete sequence 80163-80194 8 0.75
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NZ_CP035513 Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence 265218-265249 8 0.75
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NZ_CP021819 Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence 503132-503163 8 0.75
NZ_CP013025_4 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452991-3453022 32 NC_009717 Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence 288380-288411 8 0.75
NZ_CP013025_4 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452991-3453022 32 NZ_CP010657 Phaeobacter piscinae strain P71 plasmid pP71_a, complete sequence 57627-57658 8 0.75
NZ_CP013025_4 4.12|3453113|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3453113-3453144 32 NZ_CP042263 Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence 173595-173626 8 0.75
NZ_CP013025_3 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3426224-3426255 32 NZ_CP044347 Escherichia coli strain P225M plasmid pP225M-CTX-M-55, complete sequence 121862-121893 9 0.719
NZ_CP013025_3 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3426224-3426255 32 NZ_CP032533 Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence 17401-17432 9 0.719
NZ_CP013025_3 3.6|3426529|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR 3426529-3426560 32 AP014399 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 35411-35442 9 0.719
NZ_CP013025_3 3.6|3426529|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR 3426529-3426560 32 AP013383 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13 29583-29614 9 0.719
NZ_CP013025_3 3.7|3426590|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR 3426590-3426621 32 NZ_CP021994 Cryobacterium sp. LW097 plasmid unnamed1 33387-33418 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP011404 Lactobacillus salivarius str. Ren plasmid pR1, complete sequence 100759-100790 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 48192-48223 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 248214-248245 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP017108 Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence 140326-140357 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP017110 Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence 20889-20920 9 0.719
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP029460 Clostridium novyi strain 150557 plasmid pCN2, complete sequence 45232-45263 9 0.719
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NC_019846 Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence 170029-170060 9 0.719
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 NZ_CP021826 Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence 70339-70370 9 0.719
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 MG757153 Streptomyces phage BillNye, complete genome 85146-85177 9 0.719
NZ_CP013025_4 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452930-3452961 32 MK620896 Streptomyces phage Circinus, complete genome 85114-85145 9 0.719
NZ_CP013025_4 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452991-3453022 32 NZ_CP014942 Rhodococcus sp. BH4 plasmid, complete sequence 418665-418696 9 0.719
NZ_CP013025_3 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3426224-3426255 32 NZ_CP045561 Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence 141094-141125 10 0.688
NZ_CP013025_3 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3426224-3426255 32 NZ_CP014478 Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence 140150-140181 10 0.688
NZ_CP013025_3 3.8|3426651|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR 3426651-3426682 32 NZ_CP024940 Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence 1163456-1163487 10 0.688
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NC_018511 Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence 60-91 10 0.688
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NC_001446 Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence 4548-4579 10 0.688
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP009345 Bacillus thuringiensis HD1002 plasmid 6, complete sequence 1165-1196 10 0.688
NZ_CP013025_4 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452442-3452473 32 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 105460-105491 10 0.688
NZ_CP013025_4 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT 3452991-3453022 32 NZ_CP048816 Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed 34863-34894 10 0.688
NZ_CP013025_2 2.2|1357817|40|NZ_CP013025|PILER-CR 1357817-1357856 40 NZ_CP034685 Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence 143235-143274 11 0.725

1. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 1.1|210145|40|NZ_CP013025|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975 

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

26. spacer 2.1|1357758|42|NZ_CP013025|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976 

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

27. spacer 2.2|1357817|40|NZ_CP013025|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975 

catggcgtagaaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********************************.*******

28. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

29. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

30. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

31. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

32. spacer 4.15|3453296|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

33. spacer 6.1|4618936|38|NZ_CP013025|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

34. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022140 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812 

cattgaa-aacattgcctttattttattttttg	CRISPR spacer
-attaaatcacattccctctattttattttttc	Protospacer
 ***.**  ***** ***.*************

35. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 6, identity: 0.812 

tttcgcggttgcgcagagccgccgccgaggca-	CRISPR spacer
tgccgcgctcgcgcagagccgccgcc-aggtat	Protospacer
* .**** *.**************** ***.*

36. spacer 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MK448716 (Streptococcus phage Javan249, complete genome) position: , mismatch: 8, identity: 0.75 

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataacaaaacgacagcaaaagattatagtt	Protospacer
  .*********.********* ***** * .

37. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

38. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

39. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttatca	Protospacer
******** *****.********  **  .*.

40. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

41. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

42. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

43. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

44. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

45. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

46. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

47. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

48. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

49. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

50. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

51. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

52. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

53. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

54. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

55. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

56. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

57. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

58. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

59. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

60. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

61. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

62. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

63. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

64. spacer 3.5|3426468|32|NZ_CP013025|CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

65. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 8, identity: 0.75 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgctaaaacattggctttatttaatttttta	Protospacer
.  . ********* ******** *******.

66. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75 

tttcgcggttgcgcagagccgccgccgaggca	CRISPR spacer
tggccgagttgcgcggacccgccgccgaggcg	Protospacer
*  *  .*******.** *************.

67. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041042 (Paracoccus sp. AK26 plasmid pAK4, complete sequence) position: , mismatch: 8, identity: 0.75 

tttcgcggttgcgcagagccgccgccgaggca	CRISPR spacer
gcgcgcggtcgcgcagcgccgccgccgccgcc	Protospacer
 . ******.****** **********  **

68. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035513 (Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence) position: , mismatch: 8, identity: 0.75 

tttcgcggttgcgcagagccgccgccgaggca	CRISPR spacer
atgcagagctgggcggagccgccgccgaggca	Protospacer
 * *. .*.** **.*****************

69. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

tttcgcgg-----ttgcgcagagccgccgccgaggca	CRISPR spacer
-----cggctgacttgcgcagagctgccgccgtggcg	Protospacer
     ***     ***********.******* ***.

70. spacer 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_009717 (Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtggctgcgctggccgttgcagcagtttgat	CRISPR spacer
cctggccgcgcttgccgttgcagcaggaccgt	Protospacer
* ****.***** *************  . .*

71. spacer 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010657 (Phaeobacter piscinae strain P71 plasmid pP71_a, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtggctgcgctggccgttgcagcagtttgat--	CRISPR spacer
tgtggcggcgctggcagttgcagcg--ctggttc	Protospacer
.***** ******** ********.  .**.*

72. spacer 4.12|3453113|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042263 (Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

ccgccgtgccagtgatcctcatacggcctgtt	CRISPR spacer
cggtgcagccagtgatcgtcatacagcctgtg	Protospacer
* *.   ********** ******.******

73. spacer 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044347 (Escherichia coli strain P225M plasmid pP225M-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719 

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taagaacaaaacaagagcgaaatattatgcat	Protospacer
  . ********** ***.*********  *.

74. spacer 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 9, identity: 0.719 

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
atgtaacaaaaaaacagtaaaatatggtgaga	Protospacer
*.********* *****.******* .* ..

75. spacer 3.6|3426529|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR matches to AP014399 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.719 

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.

76. spacer 3.6|3426529|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR matches to AP013383 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13) position: , mismatch: 9, identity: 0.719 

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.

77. spacer 3.7|3426590|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021994 (Cryobacterium sp. LW097 plasmid unnamed1) position: , mismatch: 9, identity: 0.719 

gagcgaccagtatcaagatcgacaggttttgc	CRISPR spacer
gagcgaccagcagcaagatcgaccagacctca	Protospacer
**********.* ********** .* ..*

78. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011404 (Lactobacillus salivarius str. Ren plasmid pR1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

79. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

80. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

81. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

82. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017110 (Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

83. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029460 (Clostridium novyi strain 150557 plasmid pCN2, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
aaaaaagaacattgtatttattttatttttaa	Protospacer
 *  .*.*******. ************** .

84. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_019846 (Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence) position: , mismatch: 9, identity: 0.719 

tttcgcggttgcgcagagccgccgccgaggca	CRISPR spacer
cgggcccggtgcgcatagcccccgccgaggca	Protospacer
.    * * ****** **** ***********

85. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021826 (Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.719 

tttcgcggttgcgcagagccgccgccgaggca	CRISPR spacer
cgggcccggtgcgcatagcccccgccgaggca	Protospacer
.    * * ****** **** ***********

86. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MG757153 (Streptomyces phage BillNye, complete genome) position: , mismatch: 9, identity: 0.719 

tttcgcggt----tgcgcagagccgccgccgaggca	CRISPR spacer
----gcaactctgtgcgcatagccgccgccgagtca	Protospacer
    **...    ****** ************* **

87. spacer 4.9|3452930|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to MK620896 (Streptomyces phage Circinus, complete genome) position: , mismatch: 9, identity: 0.719 

tttcgcggt----tgcgcagagccgccgccgaggca	CRISPR spacer
----gcaactctgtgcgcatagccgccgccgagtca	Protospacer
    **...    ****** ************* **

88. spacer 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtggctgcgctggccgttgcagcagtttgat	CRISPR spacer
ggtggcggcgctggccgctgcagcggcgggca	Protospacer
 ***** **********.******.*.  *

89. spacer 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 10, identity: 0.688 

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataaaaaaacaacagcaaaattttgaaaat	Protospacer
  .*** **************** **.  .*.

90. spacer 3.1|3426224|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 10, identity: 0.688 

acgtaacaaaacaacagcaaaatattatcgac	CRISPR spacer
taataaaaaaacaacagcaaaattttgaaaat	Protospacer
  .*** **************** **.  .*.

91. spacer 3.8|3426651|32|NZ_CP013025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 10, identity: 0.688 

atcgatatgtacgttagcgaggggatcacgca	CRISPR spacer
ggcgatatttacgttagcgacgggactgacct	Protospacer
. ****** *********** ****...  *

92. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_018511 (Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

93. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NC_001446 (Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

94. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009345 (Bacillus thuringiensis HD1002 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

95. spacer 4.1|3452442|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
accttaaaacatttcctttgttttatttagat	Protospacer
  .* ******** *****.********

96. spacer 4.10|3452991|32|NZ_CP013025|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048816 (Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed) position: , mismatch: 10, identity: 0.688 

cgtggctgcgctggccgttgcagcagtttgat	CRISPR spacer
cgtggctgcgctggccgtggccgcttgccagg	Protospacer
****************** ** **   ....

97. spacer 2.2|1357817|40|NZ_CP013025|PILER-CR matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 11, identity: 0.725 

catggcgtagaaaaaagaaattttcaatattgttttatgg-	CRISPR spacer
aacacaatagaaaaaagaaattttcaaccttg-tttatact	Protospacer
 *..  .********************. *** *****.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 466083 : 511365 66 Enterobacteria_phage(48.44%) terminase,protease,tail,lysis,head,portal,transposase,capsid,integrase attL 472750:472766|attR 519311:519327
DBSCAN-SWA_2 957301 : 1048444 96 Shigella_phage(51.56%) holin,protease,terminase,plate,tail,head,portal,capsid,integrase attL 1005899:1005946|attR 1044540:1044587
DBSCAN-SWA_3 1082197 : 1119546 26 Stx2-converting_phage(60.0%) protease,transposase NA
DBSCAN-SWA_4 1948595 : 2021911 84 Enterobacteria_phage(33.33%) holin,protease,terminase,plate,tail,lysis,head,tRNA,portal,capsid,integrase attL 1964530:1964576|attR 1995341:1995387
DBSCAN-SWA_5 2316776 : 2337139 22 Salmonella_phage(28.57%) transposase,integrase attL 2316508:2316567|attR 2337349:2338705
DBSCAN-SWA_6 3112339 : 3171378 48 Stx2-converting_phage(47.62%) transposase NA
DBSCAN-SWA_7 3546576 : 3557989 12 Enterobacteria_phage(70.0%) integrase attL 3546839:3546852|attR 3563681:3563694
DBSCAN-SWA_8 4071662 : 4081105 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_9 4172655 : 4183182 10 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_10 4288986 : 4332853 54 Escherichia_phage(39.53%) holin,terminase,protease,tail,head,portal,transposase,capsid,integrase attL 4277506:4277520|attR 4298687:4298701
DBSCAN-SWA_11 4692596 : 4822167 155 Shigella_phage(48.03%) holin,bacteriocin,protease,terminase,tail,lysis,portal,capsid,integrase attL 4708939:4708958|attR 4778679:4778698
DBSCAN-SWA_12 4972539 : 5045310 75 Escherichia_phage(52.63%) protease,tail,lysis,tRNA,transposase,integrase attL 4970086:4970102|attR 5044443:5044459

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP013027
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2047 : 66783 46 Stx2-converting_phage(23.81%) integrase,protease,transposase attL 20558:20574|attR 44320:44336
DBSCAN-SWA_2 105341 : 156734 51 Escherichia_phage(19.05%) tRNA,transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP013024
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18746 : 56277 35 Escherichia_phage(30.0%) transposase,integrase attL 41764:41793|attR 60978:61007

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage