CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP013122	Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence	1 crisprs	NA	0	1	0
NZ_CP013121	Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 chromosome, complete genome	8 crisprs	cas14k,PD-DExK,WYL,cas4,cas14j,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csm6,cas1,cas2,csa3,DinG,cas3,cas5,cas7,cas8b2,DEDDh,RT	7	9	200
NZ_CP013123	Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013122_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013122_1

2821-2927

Orphan

Consensus_repeat	Method
CAGTCCATTAAACAGTCCATTAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013122_1

>merge|NZ_CP013122|1|2821-2927|CRISPRCasFinder
CACTCCATATATCAGTCCATTAAACAGTCCATTAAAAAATCTTTATAAATCAATAATTTTTTAAAAATCTTAATTTTGAACAGTCCATTGAACAGTCCATTAAAAAA

>NZ_CP013122|1|1|2821-2927|CRISPRCasFinder
CACTCCATATATCAGTCCATTAAACAG	TCCATTAAAAAATCTTTATAAATCAATAATTTTTTAAAAATCTTAATTTTGAA
CAGTCCATTGAACAGTCCATTAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013122.1\|WP_060496894.1\|156_2010_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225913
NZ_CP013122.1\|WP_023042226.1\|4996_5254_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_023042224.1\|4233_4416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_060496896.1\|5623_5896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_060496897.1\|5907_6165_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_023042227.1\|5266_5494_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_023042225.1\|4665_4986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_060496899.1\|6931_7153_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_023042222.1\|2329_2575_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013122.1\|WP_060496898.1\|6155_6791_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP013122.1\|WP_060496900.1\|7178_7445_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP013122.1\|WP_060496895.1\|3443_3785_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013122.1\|WP_060496900.1\|7178_7445_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	1.90424e-28
NZ_CP013122.1\|WP_060496894.1\|156_2010_-\|hypothetical-protein	gnl\|CDD\|225913	COG3378, COG3378, Phage associated DNA primase [General function prediction only].	1.0977e-06
NZ_CP013122.1\|WP_060496898.1\|6155_6791_-\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	9.89061e-37

>NZ_CP013122.1|WP_023042222.1|2329_2575_-|hypothetical-protein
MLDNNIKVGNFYNNIGAGRKSGYEVAKKVLEEMYKKDEEVQVSKLAKQLRVTYSTGRNYLLRFLEEELGVTTNLKYYSYKK
>NZ_CP013122.1|WP_060496894.1|156_2010_-|hypothetical-protein
MSNKIIIKPYPKVENLEEDFKYTSFTEKGKVKYEALPVRIIVQYILNAKMVGKYFYKDYANFDHPFESDKGFIKYYDEKLGIWKIADTFIKDKIDEFFTDEETKDIINCCRFAMNKDTRTSDNKILFVSVVHEMNKVLKKLGNHWNTSFEKGYLPVAFKNGTLFLNVKKGKIKFKEEKDPNFLTEIYFNINFDITKMDRENRLFKFLKQKVNLNTREKENYFKALIFDYFYTENESHHTIFFIGKNASGKSSFMKHLVGFSSMNECTKIVDLQRMIGERFTNPNWFQYPYVFTNETKEKFVEDNATFKQMVAKEELTLEQKGKDPITVKPFGKIIGLGEQPFRMKIDGGADQRIINHYFREEKIEFKKEEINQYKEYYKQIEEKDLTRNDELLQYLAYEKYEDLTDLLIQGLYCFFEGEYSKGRRTFKSKYEELFSDEVEEFGKLQNSYLELYQYFFVPDPNFFISSTALLKIIELLEISNIGTTKALREQLEMVNKKLFGFDVRFFKSETKDVKISIVENLKSYGKETGKFEIKEFILPRRTVWIFGLKLKKLEEIEEMIANNKNLIQMSRNDKYASLKISFKEIEETSYKKIFPVADLTKTSNEEIVDSKEEFPF
>NZ_CP013122.1|WP_060496895.1|3443_3785_+|hypothetical-protein
MELNLLLYRNELKKKTVYNYIFYGIIVGLVEDKIINRDELLKLYVDTFGVPKGFENIVAIARENEIKNLIFYEIKNKGTSILKKNLKILIDEKIKEMKLDEKDIKNTFDGWLK
>NZ_CP013122.1|WP_023042224.1|4233_4416_+|hypothetical-protein
MERLIITLTFKKEKFIIELKTIINANGTKIALTPIGAIFIKKYGIINLRYSNISLGILNK
>NZ_CP013122.1|WP_023042225.1|4665_4986_-|hypothetical-protein
MQLKKEFLELSTNFNNNITEDKLLFIGIFLNFYMSKSNFKNKSELQEHLKLYFNTDKKPIEIIKEVINNENIDMNYLLNRLYLALVHKKENKTIDKNTWENFLENL
>NZ_CP013122.1|WP_023042226.1|4996_5254_-|hypothetical-protein
MKVDEFLKKYDKELLTFKECQEISLFLNFENTENTTFEDVENCPGYQIFKIINFKTKKERYFLQFQSEAQEYRILELKYKYPMFL
>NZ_CP013122.1|WP_023042227.1|5266_5494_-|hypothetical-protein
MLTIEKFLEKFDNETLTKEEIHNIPNDFINESQETKKLNWLPYENGINYLIFQAKNRFFIKVKTDDELFEVKYKI
>NZ_CP013122.1|WP_060496896.1|5623_5896_-|hypothetical-protein
MDKEKLEELEGLKEDLKIKYEENFKLDNNSVIIILDEDEDAESTVEFVTIINLIINLGEKYNYTFIGISEFATTVAENLTLLKFTRARTL
>NZ_CP013122.1|WP_060496897.1|5907_6165_-|hypothetical-protein
MEVMRGVTGITTEEFIERFDKEELTENDLKVILNLAFYLENTDKLEWDILEHSNNYKIFKIGNRCFLQIHYPNMLIFELKAERYL
>NZ_CP013122.1|WP_060496898.1|6155_6791_-|recombinase-family-protein
MEYGYIRVSTNLQDHTRQEKALLEYGILAENIYSDIGSGKDFNRPQYQKLVNKVIKAGDTLVITSLDRLGRDMKLILENYNLIVDTRGVTLISLEQPELNSTNPILKTVMLSIYTMLADIERKTMLERQRQAYNSMKKTDTGKLISNKTGEVVGRKKASHNFKKEDIELLKNWIDKTTELTTNQVLKALDVSRPTLYKLKKEYLAGELKWK
>NZ_CP013122.1|WP_060496899.1|6931_7153_-|hypothetical-protein
MEKGKILRNLEKLLNRDFEFINAGRILVVANNKNITADLINSMCFKLDIDPNKIYKADLIKIIDYIKGLESIE
>NZ_CP013122.1|WP_060496900.1|7178_7445_-|Txe/YoeB-family-addiction-module-toxin
MNKKQVLWHIEALEEYSEWQNEDLKKANKITKLIKEILREGVLKGTGKPERLKYSGGYSRRIDQEHRLVYEVENDILVIISCKGHYEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013122_1	1.1\|2848\|53\|NZ_CP013122\|CRISPRCasFinder	2848-2900	53	NZ_CP013122	Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence	2848-2900	0	1.0
NZ_CP013122_1	1.1\|2848\|53\|NZ_CP013122\|CRISPRCasFinder	2848-2900	53	NC_021277	Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence	9658-9710	0	1.0

1. spacer 1.1|2848|53|NZ_CP013122|CRISPRCasFinder matches to NZ_CP013122 (Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccattaaaaaatctttataaatcaataattttttaaaaatcttaattttgaa	CRISPR spacer
tccattaaaaaatctttataaatcaataattttttaaaaatcttaattttgaa	Protospacer
*****************************************************

2. spacer 1.1|2848|53|NZ_CP013122|CRISPRCasFinder matches to NC_021277 (Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tccattaaaaaatctttataaatcaataattttttaaaaatcttaattttgaa	CRISPR spacer
tccattaaaaaatctttataaatcaataattttttaaaaatcttaattttgaa	Protospacer
*****************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013121

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013121_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_1

289528-290167

TypeIII

Consensus_repeat	Method
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	PILER-CR

8 spacers

cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas14j

The CRISPR arrays of NZ_CP013121_1

>merge|NZ_CP013121|1|289528-290167|PILER-CR
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGAAATCTATCAGATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACTTTATATATATTTTTAAATCTTTTAAATTATCTAATTTATTTATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAGTATTTATTACTTCATTTAGAGATAATACAATTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACCCATTTATAACAGATTTTGCATTGCAATAATCGTTATAAAATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC

>NZ_CP013121|1|1|289528-290167|PILER-CR
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AAACTTTATCCTGATGAAATCTATCAG
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	TTTATATATATTTTTAAATCTTTTAAATTATCTAATTTATTT
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AGTATTTATTACTTCATTTAGAGATAATACAATTC
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	CCATTTATAACAGATTTTGCATTGCAATAATCGTTATAAA
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC	AAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_060495754.1\|302312_303416_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|223708
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_CP013121.1\|WP_187102932.1\|295137_296334_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349941
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274212
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|312974
NZ_CP013121.1\|WP_032887995.1\|292763_293231_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380350
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP013121.1\|WP_005900732.1\|293391_293721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005900727.1\|298973_299714_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214621
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_CP013121.1\|WP_060495752.1\|297750_298371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023036531.1\|299883_300603_+\|complement-resistance-protein-TraT	unknown	unknown	gnl\|CDD\|377558
NZ_CP013121.1\|WP_060495751.1\|296502_297702_+\|HTH-domain-containing-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060495749.1\|293740_295102_-\|glutamate:sodium-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP013121.1\|WP_060495753.1\|300640_302329_+\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.6e-21	71.1	0.8
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	2.2e-15	52.1	4.2
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.4e-18	62.4	0.0
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	4.2e-112	370.1	24.1
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	1e-71	235.8	0.6
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	2e-28	94.0	34.0
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	2e-206	682.1	33.9
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	2.8e-41	136.4	14.6
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	3.9e-98	323.1	1.6
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	1e-19	65.7	24.7

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_060495754.1\|302312_303416_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	3.31031e-131
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	9.79453e-06
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.40678e-58
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	1.5418e-78
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	gnl\|CDD\|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.03349e-27
NZ_CP013121.1\|WP_032887995.1\|292763_293231_+\|cupin-domain-containing-protein	gnl\|CDD\|380350	cd02221, cupin_TM1287-like, Thermotoga maritima TM1287 decarboxylase, cupin domain. This family includes bacterial proteins homologous to TM1287 decarboxylase, a Thermotoga maritima manganese-containing cupin thought to catalyze the conversion of oxalate to formate and carbon dioxide, due to its similarity to oxalate decarboxylase (OXDC) from Bacillus subtilis. TM1287 shows a cupin fold with a conserved "jelly roll-like" beta-barrel fold and forms a homodimer.	9.60751e-37
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.07136e-30
NZ_CP013121.1\|WP_187102932.1\|295137_296334_-\|amidohydrolase	gnl\|CDD\|349941	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). This family includes Staphylococcus aureus amidohydrolase, SACOL0085, which contains two manganese ions in the active site, and forms a homotetramer with variations in interdomain orientation which possibly plays a role in the regulation of catalytic activity.	0
NZ_CP013121.1\|WP_005900727.1\|298973_299714_-\|VWA-domain-containing-protein	gnl\|CDD\|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	1.52388e-05
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.0014e-10
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.62003e-18
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.91476e-11
NZ_CP013121.1\|WP_023036531.1\|299883_300603_+\|complement-resistance-protein-TraT	gnl\|CDD\|377558	pfam05818, TraT, Enterobacterial TraT complement resistance protein. The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings.	1.0775e-92
NZ_CP013121.1\|WP_060495749.1\|293740_295102_-\|glutamate:sodium-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	7.48485e-27
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.74319e-116
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP013121.1\|WP_060495753.1\|300640_302329_+\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0

>NZ_CP013121.1|WP_060495748.1|288835_289159_+|CRISPR-associated-endonuclease-Cas2
MDNWDFLDEDFEKEVFEDNFTVIIIYDIISNKRRTQLSKLLSGFGFRIQKSAFECLLTREKYKSLIEKIDRYAKPEDLIRIYRLNQNVVTQIYGEKLENENEIYYFF
>NZ_CP013121.1|WP_060495747.1|287822_288830_+|CRISPR-associated-endonuclease-Cas1
MSNLYIYEQGIVLRYKENRLLITYTNGDYKSIPIENIDNVVIFGGIQLSTACMHNLLTKGIHVTFLSKNGAYFGRLESTSNINIDRQREQFRRSDDKEFCLEIAKKFIKGKATNQRTIIIRANKDLKSGILSSTITSMFGIIKDINDSKTIEELMGVEGYLAKLYFNALNHIIDKKYSFKTRTKRPPKDPFNAIISFGYTLLHYEIFTTLVTKGLNPYAAFLHSDRHKHPALCSDLMEEWRAILVDSLAIALLNNNKIIYEDFDFDEKSGGVFLNKKACEKFVEQFEKRLRQEVSYITEVPYKMSFRRIIEYQVMLLIKALENNNADMYKPVLIR
>NZ_CP013121.1|WP_060495746.1|286414_287809_+|CRISPR-associated-protein
MSKKILLTFAGNTDPTRGEHDGPIIHICRYYKPDNIYLILTKEMEERDEEPHNIYERAIKENLKNYNPEIIRIKTGIKDAHHFDIYFSWIYETFEIIKKENKDAEIYLNMTSGTSQMTTNLLMYYIDSLDLNLIPIQVETYKKQSNQSEENNKTVDKNYDVEAEAICNLDNEEKTRTYRIVEPDLKKYSRILTKNQIEKLLEQYKYEAISELLKRNIFDKNLELNTLVNFAIERTNLKGLDCNKKLNSLNNKDYNKLYYFTKDKNITIIPDWYQIVDFFSLANIKQKTEDISTYTLMLEPIIVKIYLSILKDLMGKNLDELFKRDSNGYKIELRRLENGLKEMIKEDLNKDSLKDNVYISAQVLVSTIKYYLKNNINLANYINVEYFNNLAETLAKMKTVRNTLAHELKSISREDFNKESETTVEQINSKILDFFNKFYTSLGYKKEMVEIYDNINKEIVKLLK
>NZ_CP013121.1|WP_060495745.1|285699_286422_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLAQINIELEANGLSTNMGSLFHGYLMENIDSAYADYFHYNTTNPFTSCIFKDMKTDKFFWRITTFNQKAYDMLMTCFSNNIPETIYLKNKDLEINVKSFSIQKKSYDDLFLECTERKRIKLISPTSFKSNGVTHIFPNISTLISGVIEKINQHSDSAELANRKIIDELLEKVYIKDYNLRTKIFHLESIKIKGFIGTMDLGIKGEDSTLANILNFLILMSEYTGFGIKTSLGMGGIKIE
>NZ_CP013121.1|WP_060495744.1|284546_285716_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MSNIIKYKMKLEVLTPLHIGGADYKSKLDKKEYVFDKDKGTLTLIDSEKFISFLIKKNLFDDYIFYIQKNLNLKKHEQDKNIKLIDFLKSRDIYKNIEEFRKKAPIKIDAEIEEMNDIKLMLRNLQGKPYIPGSSIKGAIINFLLVNYIINHRDKFKIERNKILEIAKKANNDNDIKKAKNDIKRIVNEIEKSIIYGDNKELEKSKRFGISVSDTYNYSNTRTYFYRDIDEKRDKSKEEKEQAIPVYREYVMANSIFDFDITLDIDLMEKSKFKIKNMSNLTEALENTSNYLINNILKDKNSPQIENLILGANTGFLQKTIIYSLFEKEEERLEVIKKLLHLKKGDKIKDHLKDKFSPRVLNRIKINGKNYLAGLVKIMKVEEKNVGTN
>NZ_CP013121.1|WP_060495743.1|283545_284550_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MSYLLYKLRFPNGIHIGTASGNTLEETMISVYSDTFYSALYNEYMKLYNNDELYKISESGDFLVSDLFPFKEKEDISTDFYLPKPFISIQRDEKEKNDEEVVDRKKVKATNFIPADRLEEYFSFLKTGKNFPEIDDDFGRKQLYTKNKVSLENEDTQLYNIEIFKFNKQSGLYFIVKLPEDEKWGGIFENILESLSLTGIGGKKNSGFGEFVFEDPMFFYGEDFDPIESESDAYINKALYSDEEKFFSISSYSPKIEEIEKIKESENYYQLIKRSGFVNSSLYSEQAEKRKQVYMLSSGSVLNFKPEGKMLDLNLHGKHSIYRMGKPIVLGVKI
>NZ_CP013121.1|WP_060495742.1|282838_283546_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYTLKGKLLIKGTIKLITGLHIGTSGDFSAIGAVDTIVIRDSVTNKPMIPGSSLKGKMRYLLARTKYNSSLETKEIKEEDECIKRLFGSSDPIITSRLQFQDSLLSDKSIEDFKEFEFDLPYTEIKYENTIDRIKGVANPRQLERVPAGSEFDFKVVYNVEKIEDFEEDMKNILLMMDVLEDDYLGGHGTRGYGRIKFKNLSLELKTYTEENKKELTTIEEEINNFRKELESKVE
>NZ_CP013121.1|WP_060495741.1|282436_282802_+|type-III-A-CRISPR-associated-protein-Csm2
MNNVNVQEKVEKYQMDKRNAVTTTQLRLLLSNAVIIKNKIQVEERKEKKNVISEKLENEIKYLLVKHIYQCGREPKVKIFDKEFHISEKIKEVGNSAKKFNDFYRYLEEIIAYMKYYESDK
>NZ_CP013121.1|WP_060495740.1|279907_282433_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MDEKLIYLQLGALLHDIGKIVRRAGLDSKEHSEAGSNYLKDNNLLDDKYKDIYDMINYHHHKYLRSAKLKEDSLAYIVYEADNIASGLDRVKYEDEKIRGNEMDSLNSIFNVIKVEKNNLKKTFKLFDFDKNGFNMPTSNNIKLTNSDYKKVIDYIKNNLNNFKQNINLEKLIVILEACCSYFPSSSYVDAPDISYYDHVKLTAAISACFYLFDKENNIQNFKEEYFSNIDRNKKKFLLVSGEFSGIQNFIYTISSKMAMKSLRGRSFYLELFAEHIIDELLSALELSRINLLYSGGSHFYLLLPNTKKAKEVIDNYKEKINNFILETIGATIYFEMVYTENSAEELGNGLNEKIKTENRVGELFRKTSNKVSKAKLSRYSLGQLKELLDENSSINKIKSYTKECKICKKNEDEKILENNAKYFLDEDGIELCDSCKGYINLGRNISKLYHTNNEFIIEENCEKNKNTLIFPKYQEGYVNILIKNKDYILKNIDKIYRYYAINSNYVGDKLCKNIWIGNYNIIAKDENLIEFKNLVKKSKGIERLAVFRADVDNLGTLFQSGFEDKASKEPYKNVTLSKSVVLSRYLSDFFKRKINLILEKKDAAKDNNEIFKKYCDIICENNSNPRDIVIVYSGGDDVFAIGTWNDIIEFSIDLRNAFKEFTNDKITLSAGIGFFSENFPIHQMAEKTGNLESMAKTNKDSSGKIIKNSVALFGEINAELNHIYTWDIFIDKVLEEKYKFIKSVTILREEDKGKYKDRIVIGKSKWYKIMDLIVNRLIKDNNRLDIARFAYILGRIDFTSENKDNFNEFKKNLLLWLKDKEEAKQLLTAINILIYQERGE
>NZ_CP013121.1|WP_060495739.1|278069_279173_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYKFRFYPSKTQITMLNCTFGCVRYVYNHFLGLKQELYNKEKKSMSYSQCSKVLTVLKQEKEWLKDVDKFSLQNSLKDLDKAYKNFFRGKCYPKFKSKKDNRKSYRTNYTNNNIEFLDKWIKVPKLGKLKIRDKLKLQGRILSATITQTPSGKYYISLCCTDVEVKKLESTNKSVGIDLGIKNFALTSDEISIENPKYLQKSLNKLAILQRKLSRKPKGSSNRNKARIKVARLFEKISNQRKDFLQRLSTELIRKYDIICMEDLQVKNMVRNHKLARNIVDVSWSEFNRILEYKAKWYGRTIVKVDKFFASSQICNCCGNKNEEVKDLSIREWTCPVCGTVHNRDINAAKNILKEGLRILGISA
>NZ_CP013121.1|WP_032887995.1|292763_293231_+|cupin-domain-containing-protein
MKKLLFFTLFIGICMSGVASTKEKNPNLLKQVYKKEELITLDKEKVAGGNGTLHGKFAFTRDMATEEDAIKEIGWMTLNKGESVGVHPHKNNEDTYIIVSGEGIFTDGSGKETVVKAGDVTIARPNQSHGLRNEKDEPLVFLDIIAQNHALKIEK
>NZ_CP013121.1|WP_005900732.1|293391_293721_-|hypothetical-protein
MSNLDFTLICIVKFFSKKRKTPPNLSNGNYYPHLVIKGDTEYLGVCFIDGEEVIFDKEIIASALPLYEGVDYSGLTKGTEFMIMEGGNKVGEGVIDEIFQHIPAKELKK
>NZ_CP013121.1|WP_060495749.1|293740_295102_-|glutamate:sodium-symporter
MTSKIFMDLLNSLGLLGLFLILGTFLRAKIKFFQTTFIPASVIGGFLLLILGPICLNVIKIPEEWLKIFSLIPGVLIVPIVASVPLGLKSSSEKKSMKNILPLAFIGIAIAMLQFGFGFSAQYIFPNYDFYKTFGWELGIGFVGGHGTAGLLGNMLQSANLDFWEIAQGVATTTATFGLVGGILIGMLLINIASRKNFTAILKKPGDIPESFKIGFVKDIENQPKLGRETTLTSSVDTLAFHAAIIFGVCLISSQLQSFIKVHKIPVFDQISIWAYAMIIMFIVWKIFGKLKIDFLIDSNTKSRISGSLTEFAVTAAIASLPIKAVFTYLVPILFIVIVGFIVTTLFLFYMCKFFIKDYWFEHMIATFGMATGVFLTGILLLRICDPDFKSPVLANYSLSYTITSIVYFVFLNVILTLLLTKGLFFGMSFTFIVGILFTLAAIISSKILLKDK
>NZ_CP013121.1|WP_187102932.1|295137_296334_-|amidohydrolase
MEVIMDFKEVEKIIDKYIDEIIDFRRDIHSHPELSGNEKRTSEKVIEKLNKLPVEIITNVNGYGIIANLKGNTNKKTILLRGDMDALPINEINDLPFISKNKNIMHACGHDMHTSILLGTSFVLSYFKDKLNGNIKFMFQPSEEASPIGGSKGMIAEGLLENPKVDEAYALHVFGIPTGSVAIKPGVATSRSDRIDIEIFGKSSHASIPSEGRDAIVVAGNIITSIQSIISRNMPPNQTAVITIGKMEGGSRYNVLADYVKLEGTVRTFSTENADMIKERLQKIVEDIASAYGCSAKLNYQNGYDFVYNDPDLSEAAIKSLNEILGKENVLVQSNPLPAGEDFSFVTKKVPSVFMWLGTESDFNKGKCTLHSPEFIADETSLKIGITTFCKLVFDRLN
>NZ_CP013121.1|WP_060495751.1|296502_297702_+|HTH-domain-containing-protein
MIKLAILTPQNSYENIKKCLKGIECEIKYIFYDNLYDLESLYLKNAQEYDGIITSGPIGYEIIKNSVELFTPLYHFDISKGDLYKYLFNILKENPKIDFSRVYIDFISPEKKEYWFQDIFKKEKEPIFYQINFSNKNLYETLKSNYINLKKENKIDMVLTRISNMIKFLKNEEISFDFLFPSEENIKNTVLEVIKDIKILKSEKKQIIFGKLLLDEISIDIEEEIHSISKNCIVKILEKNIEIMMIYEDFINSNIALNLKKKLKEKFYSGWGKGNNINEARYNAEKSYKKNVDLNSEVIYLVSTNSEIILSEIDTEKKKNIEIIEKLKELNITKQNSKKLIELFKSKEKVSCASLANYLAISERTANRLLLKLEENNLAISDLVKINRGRPKKLYKFSF
>NZ_CP013121.1|WP_060495752.1|297750_298371_-|hypothetical-protein
MKKIFILLIVLLGLLVIGCGKKWDYQVTKKESIQIGNDITFYLLTLKEKESGNEIEPLQITKEGFDKYNIEDKLTKEELDSIKISEDSLVNSDLTLKGNYCIVENTSSTDLKFIPENTEFSILAVGKQEDVTPTIPTMILIDKEHKLFYIIILKNQWDAEEFEYTINKDDLKNIEARHMATGNYDENDLSSIENLKNDIHFVEEEK
>NZ_CP013121.1|WP_005900727.1|298973_299714_-|VWA-domain-containing-protein
MNKFLIALLVTIFGFSFSNKAFAKSVIVEKKKNNIVDVVFILDRSGSMGGLESDTIGGFNSMLEKQRKIEGKAFITTVLFDDQYELLHDRVNIAKVNNITEKEYFVRGSTALLDAIGKTIAKEKAIQDTLGKNEKADKVLFVIITDGLENASKEYNSSTVKKLIETQKEKYGWEFLFLGANIDAIETANTIGISAERAVNYKSDSIGTKKNYDTLNKAVEEVRSGKDLDKNWKADIEADYNERNKK
>NZ_CP013121.1|WP_023036531.1|299883_300603_+|complement-resistance-protein-TraT
MKKNLKTILFSLLLIFAFVSCSTMHTVISKRNLDVQTKMSDTIWLEPAAANEKTVFIQIRNTSGKNLNIEQKITNILASKGYRIVNDPSEAKYWLQANILKVDKVNLDSDNGFSDAVLGAGIGGVLGAQRSGGAYTAIGWGLAGAAIGTLADALVDDTAYAMVTDILITEKTGRNVQTATRNSVKQGNSGSMTSTSSGSSNMEKYSTRVLSTANQVNLNFNSAIPILEDELGKVVGGIF
>NZ_CP013121.1|WP_060495753.1|300640_302329_+|phospho-sugar-mutase
MFLDEYKKWLDSNMLSASEKEELKSIANNEKEIESRFYTDLSFGTAGMRGVRGIGRNRMNKYNIRKATQGLANYIIKETGEVGKKKGVAIAYDSRLDSVENAINTAMTLAGNGIKVYLFDGVRSTPELSFAVRELKAQAGIMITASHNPKEYNGYKVYWEDGAQIVDPQATGIVSSVEAVDIFNGIKLMEEKEAIDKGLLVYVGEKLDDRYIEEVKKNAINPNVENKDKVKFVYSPLHGVAARPVERVLKEMGYTNVYPVKKQEKPDGNFPTCDYANPEDTNVFKLSTELADKVGAKICIANDPDGDRVGLAVLDNDGKWFFPNGNQIGILFAEYILNHKKNIPENGTMITTIVSTPLLDTIVKKNGKKALRVLTGFKYIGEKIRQFENKELDGTFLFGFEEAIGYLVGTHVRDKDAVVASMIIAEMATTFENNGSSIYNEIIKIYEKYGWRLETTVPITKKGKDGLEEIQKIMKSMRAKTHTEIAGIKVKEYRDYQKGVDNLPKADVIQMVLEDETYLTVRPSGTEPKIKFYISVVDSDKKVAEEKLARIEKEFINYAENL
>NZ_CP013121.1|WP_060495754.1|302312_303416_+|radical-SAM-family-heme-chaperone-HemW
MLKIYNTYIHIPFCERKCNYCDFTSLKGTDNQIEKYVNYLLKEIEIYKKKYDLSEKQDTIYFGGGTPSLLPIDSLEKILSKFSYDKNTEITIEVNPKTVNSNKLKEYRKLGINRLSIGIQTFNDDNLKLLGRIHNSEEAIEVYNLARECRFDNISLDIMFSLPNQTLSILQDDLERLVNLNPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEFLKSKDYIHYEISNFSKKDFEARHNSIYWENKQYLGVGLSAAGYLANVRYKNFFNLKDYYNNLDKNILPIDEREILTEEDIEEYRYLVGFRLLNKVIVPSEKYLDKCVSLSKEGYLLEKENGYILSHKGLMLFNDFISNFIDI

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Crispr_ID: NZ_CP013121_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_2

291934-292593

TypeIII

Consensus_repeat	Method
ATAAGAGAGAATATAACTCCGA	PILER-CR

8 spacers

cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas14j

The CRISPR arrays of NZ_CP013121_2

>merge|NZ_CP013121|2|291934-292593|PILER-CR
ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTCATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTATTTTTATTTTCTAATAAGAGAGAATATAACTCCGAGAGGAGACGGAAACTTGTGAATGAGTAAGGATGTCTTTTATCTTACTACGATAAAATAAGAGAGAATATAACTCCAAAAGGAGACGGAAACTTCTGTGTTAGGTAAAGATGTAAGATGATTAGTTTTTCCAGTCAATAAGAAAGAATATAACTCTGAGAGGAGACGGAAACACTCCAATCTCTCCTGCTCTTACCTTAGCCCAAAACTTGTCTAATAAGAAAGAATATAACTCCAAAAGGAGACGGAAACTTGAATAGAATTGATCAACCATTTTGGAAGATCTTTAATAAGAGAGAATATAACTCCCA

>NZ_CP013121|2|2|291934-292593|PILER-CR
ATAAGAGAGAATATAACTCCGA	GAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGA	GAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGA	GAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTC
ATAAGAGAGAATATAACTCCGA	GAGGAGACGGAAACAAACTTTATCCTGATGCTTTTTAGAAAAATCAATTTTATTTTATTTTTATTTTCTA
ATAAGAGAGAATATAACTCCGA	GAGGAGACGGAAACTTGTGAATGAGTAAGGATGTCTTTTATCTTACTACGATAAA
ATAAGAGAGAATATAACTCCAA	AAGGAGACGGAAACTTCTGTGTTAGGTAAAGATGTAAGATGATTAGTTTTTCCAGTCA
ATAAGAAAGAATATAACTCTGA	GAGGAGACGGAAACACTCCAATCTCTCCTGCTCTTACCTTAGCCCAAAACTTGTCTA
ATAAGAAAGAATATAACTCCAA	AAGGAGACGGAAACTTGAATAGAATTGATCAACCATTTTGGAAGATCTTTA
ATAAGAGAGAATATAACTCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_060495754.1\|302312_303416_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|223708
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_CP013121.1\|WP_187102932.1\|295137_296334_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349941
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274212
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|312974
NZ_CP013121.1\|WP_032887995.1\|292763_293231_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380350
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP013121.1\|WP_005900732.1\|293391_293721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005900727.1\|298973_299714_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214621
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_CP013121.1\|WP_060495752.1\|297750_298371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023036531.1\|299883_300603_+\|complement-resistance-protein-TraT	unknown	unknown	gnl\|CDD\|377558
NZ_CP013121.1\|WP_060495751.1\|296502_297702_+\|HTH-domain-containing-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060495749.1\|293740_295102_-\|glutamate:sodium-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP013121.1\|WP_060495753.1\|300640_302329_+\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.6e-21	71.1	0.8
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	2.2e-15	52.1	4.2
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.4e-18	62.4	0.0
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	4.2e-112	370.1	24.1
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	1e-71	235.8	0.6
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	2e-28	94.0	34.0
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	2e-206	682.1	33.9
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	2.8e-41	136.4	14.6
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	3.9e-98	323.1	1.6
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	1e-19	65.7	24.7

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_060495754.1\|302312_303416_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	3.31031e-131
NZ_CP013121.1\|WP_060495745.1\|285699_286422_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	9.79453e-06
NZ_CP013121.1\|WP_060495739.1\|278069_279173_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.40678e-58
NZ_CP013121.1\|WP_060495742.1\|282838_283546_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	1.5418e-78
NZ_CP013121.1\|WP_060495746.1\|286414_287809_+\|CRISPR-associated-protein	gnl\|CDD\|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.03349e-27
NZ_CP013121.1\|WP_032887995.1\|292763_293231_+\|cupin-domain-containing-protein	gnl\|CDD\|380350	cd02221, cupin_TM1287-like, Thermotoga maritima TM1287 decarboxylase, cupin domain. This family includes bacterial proteins homologous to TM1287 decarboxylase, a Thermotoga maritima manganese-containing cupin thought to catalyze the conversion of oxalate to formate and carbon dioxide, due to its similarity to oxalate decarboxylase (OXDC) from Bacillus subtilis. TM1287 shows a cupin fold with a conserved "jelly roll-like" beta-barrel fold and forms a homodimer.	9.60751e-37
NZ_CP013121.1\|WP_060495743.1\|283545_284550_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.07136e-30
NZ_CP013121.1\|WP_187102932.1\|295137_296334_-\|amidohydrolase	gnl\|CDD\|349941	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). This family includes Staphylococcus aureus amidohydrolase, SACOL0085, which contains two manganese ions in the active site, and forms a homotetramer with variations in interdomain orientation which possibly plays a role in the regulation of catalytic activity.	0
NZ_CP013121.1\|WP_005900727.1\|298973_299714_-\|VWA-domain-containing-protein	gnl\|CDD\|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	1.52388e-05
NZ_CP013121.1\|WP_060495744.1\|284546_285716_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.0014e-10
NZ_CP013121.1\|WP_060495748.1\|288835_289159_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.62003e-18
NZ_CP013121.1\|WP_060495741.1\|282436_282802_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	5.91476e-11
NZ_CP013121.1\|WP_023036531.1\|299883_300603_+\|complement-resistance-protein-TraT	gnl\|CDD\|377558	pfam05818, TraT, Enterobacterial TraT complement resistance protein. The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings.	1.0775e-92
NZ_CP013121.1\|WP_060495749.1\|293740_295102_-\|glutamate:sodium-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	7.48485e-27
NZ_CP013121.1\|WP_060495747.1\|287822_288830_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.74319e-116
NZ_CP013121.1\|WP_060495740.1\|279907_282433_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP013121.1\|WP_060495753.1\|300640_302329_+\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0

>NZ_CP013121.1|WP_060495748.1|288835_289159_+|CRISPR-associated-endonuclease-Cas2
MDNWDFLDEDFEKEVFEDNFTVIIIYDIISNKRRTQLSKLLSGFGFRIQKSAFECLLTREKYKSLIEKIDRYAKPEDLIRIYRLNQNVVTQIYGEKLENENEIYYFF
>NZ_CP013121.1|WP_060495747.1|287822_288830_+|CRISPR-associated-endonuclease-Cas1
MSNLYIYEQGIVLRYKENRLLITYTNGDYKSIPIENIDNVVIFGGIQLSTACMHNLLTKGIHVTFLSKNGAYFGRLESTSNINIDRQREQFRRSDDKEFCLEIAKKFIKGKATNQRTIIIRANKDLKSGILSSTITSMFGIIKDINDSKTIEELMGVEGYLAKLYFNALNHIIDKKYSFKTRTKRPPKDPFNAIISFGYTLLHYEIFTTLVTKGLNPYAAFLHSDRHKHPALCSDLMEEWRAILVDSLAIALLNNNKIIYEDFDFDEKSGGVFLNKKACEKFVEQFEKRLRQEVSYITEVPYKMSFRRIIEYQVMLLIKALENNNADMYKPVLIR
>NZ_CP013121.1|WP_060495746.1|286414_287809_+|CRISPR-associated-protein
MSKKILLTFAGNTDPTRGEHDGPIIHICRYYKPDNIYLILTKEMEERDEEPHNIYERAIKENLKNYNPEIIRIKTGIKDAHHFDIYFSWIYETFEIIKKENKDAEIYLNMTSGTSQMTTNLLMYYIDSLDLNLIPIQVETYKKQSNQSEENNKTVDKNYDVEAEAICNLDNEEKTRTYRIVEPDLKKYSRILTKNQIEKLLEQYKYEAISELLKRNIFDKNLELNTLVNFAIERTNLKGLDCNKKLNSLNNKDYNKLYYFTKDKNITIIPDWYQIVDFFSLANIKQKTEDISTYTLMLEPIIVKIYLSILKDLMGKNLDELFKRDSNGYKIELRRLENGLKEMIKEDLNKDSLKDNVYISAQVLVSTIKYYLKNNINLANYINVEYFNNLAETLAKMKTVRNTLAHELKSISREDFNKESETTVEQINSKILDFFNKFYTSLGYKKEMVEIYDNINKEIVKLLK
>NZ_CP013121.1|WP_060495745.1|285699_286422_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLAQINIELEANGLSTNMGSLFHGYLMENIDSAYADYFHYNTTNPFTSCIFKDMKTDKFFWRITTFNQKAYDMLMTCFSNNIPETIYLKNKDLEINVKSFSIQKKSYDDLFLECTERKRIKLISPTSFKSNGVTHIFPNISTLISGVIEKINQHSDSAELANRKIIDELLEKVYIKDYNLRTKIFHLESIKIKGFIGTMDLGIKGEDSTLANILNFLILMSEYTGFGIKTSLGMGGIKIE
>NZ_CP013121.1|WP_060495744.1|284546_285716_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MSNIIKYKMKLEVLTPLHIGGADYKSKLDKKEYVFDKDKGTLTLIDSEKFISFLIKKNLFDDYIFYIQKNLNLKKHEQDKNIKLIDFLKSRDIYKNIEEFRKKAPIKIDAEIEEMNDIKLMLRNLQGKPYIPGSSIKGAIINFLLVNYIINHRDKFKIERNKILEIAKKANNDNDIKKAKNDIKRIVNEIEKSIIYGDNKELEKSKRFGISVSDTYNYSNTRTYFYRDIDEKRDKSKEEKEQAIPVYREYVMANSIFDFDITLDIDLMEKSKFKIKNMSNLTEALENTSNYLINNILKDKNSPQIENLILGANTGFLQKTIIYSLFEKEEERLEVIKKLLHLKKGDKIKDHLKDKFSPRVLNRIKINGKNYLAGLVKIMKVEEKNVGTN
>NZ_CP013121.1|WP_060495743.1|283545_284550_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MSYLLYKLRFPNGIHIGTASGNTLEETMISVYSDTFYSALYNEYMKLYNNDELYKISESGDFLVSDLFPFKEKEDISTDFYLPKPFISIQRDEKEKNDEEVVDRKKVKATNFIPADRLEEYFSFLKTGKNFPEIDDDFGRKQLYTKNKVSLENEDTQLYNIEIFKFNKQSGLYFIVKLPEDEKWGGIFENILESLSLTGIGGKKNSGFGEFVFEDPMFFYGEDFDPIESESDAYINKALYSDEEKFFSISSYSPKIEEIEKIKESENYYQLIKRSGFVNSSLYSEQAEKRKQVYMLSSGSVLNFKPEGKMLDLNLHGKHSIYRMGKPIVLGVKI
>NZ_CP013121.1|WP_060495742.1|282838_283546_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYTLKGKLLIKGTIKLITGLHIGTSGDFSAIGAVDTIVIRDSVTNKPMIPGSSLKGKMRYLLARTKYNSSLETKEIKEEDECIKRLFGSSDPIITSRLQFQDSLLSDKSIEDFKEFEFDLPYTEIKYENTIDRIKGVANPRQLERVPAGSEFDFKVVYNVEKIEDFEEDMKNILLMMDVLEDDYLGGHGTRGYGRIKFKNLSLELKTYTEENKKELTTIEEEINNFRKELESKVE
>NZ_CP013121.1|WP_060495741.1|282436_282802_+|type-III-A-CRISPR-associated-protein-Csm2
MNNVNVQEKVEKYQMDKRNAVTTTQLRLLLSNAVIIKNKIQVEERKEKKNVISEKLENEIKYLLVKHIYQCGREPKVKIFDKEFHISEKIKEVGNSAKKFNDFYRYLEEIIAYMKYYESDK
>NZ_CP013121.1|WP_060495740.1|279907_282433_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MDEKLIYLQLGALLHDIGKIVRRAGLDSKEHSEAGSNYLKDNNLLDDKYKDIYDMINYHHHKYLRSAKLKEDSLAYIVYEADNIASGLDRVKYEDEKIRGNEMDSLNSIFNVIKVEKNNLKKTFKLFDFDKNGFNMPTSNNIKLTNSDYKKVIDYIKNNLNNFKQNINLEKLIVILEACCSYFPSSSYVDAPDISYYDHVKLTAAISACFYLFDKENNIQNFKEEYFSNIDRNKKKFLLVSGEFSGIQNFIYTISSKMAMKSLRGRSFYLELFAEHIIDELLSALELSRINLLYSGGSHFYLLLPNTKKAKEVIDNYKEKINNFILETIGATIYFEMVYTENSAEELGNGLNEKIKTENRVGELFRKTSNKVSKAKLSRYSLGQLKELLDENSSINKIKSYTKECKICKKNEDEKILENNAKYFLDEDGIELCDSCKGYINLGRNISKLYHTNNEFIIEENCEKNKNTLIFPKYQEGYVNILIKNKDYILKNIDKIYRYYAINSNYVGDKLCKNIWIGNYNIIAKDENLIEFKNLVKKSKGIERLAVFRADVDNLGTLFQSGFEDKASKEPYKNVTLSKSVVLSRYLSDFFKRKINLILEKKDAAKDNNEIFKKYCDIICENNSNPRDIVIVYSGGDDVFAIGTWNDIIEFSIDLRNAFKEFTNDKITLSAGIGFFSENFPIHQMAEKTGNLESMAKTNKDSSGKIIKNSVALFGEINAELNHIYTWDIFIDKVLEEKYKFIKSVTILREEDKGKYKDRIVIGKSKWYKIMDLIVNRLIKDNNRLDIARFAYILGRIDFTSENKDNFNEFKKNLLLWLKDKEEAKQLLTAINILIYQERGE
>NZ_CP013121.1|WP_060495739.1|278069_279173_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYKFRFYPSKTQITMLNCTFGCVRYVYNHFLGLKQELYNKEKKSMSYSQCSKVLTVLKQEKEWLKDVDKFSLQNSLKDLDKAYKNFFRGKCYPKFKSKKDNRKSYRTNYTNNNIEFLDKWIKVPKLGKLKIRDKLKLQGRILSATITQTPSGKYYISLCCTDVEVKKLESTNKSVGIDLGIKNFALTSDEISIENPKYLQKSLNKLAILQRKLSRKPKGSSNRNKARIKVARLFEKISNQRKDFLQRLSTELIRKYDIICMEDLQVKNMVRNHKLARNIVDVSWSEFNRILEYKAKWYGRTIVKVDKFFASSQICNCCGNKNEEVKDLSIREWTCPVCGTVHNRDINAAKNILKEGLRILGISA
>NZ_CP013121.1|WP_032887995.1|292763_293231_+|cupin-domain-containing-protein
MKKLLFFTLFIGICMSGVASTKEKNPNLLKQVYKKEELITLDKEKVAGGNGTLHGKFAFTRDMATEEDAIKEIGWMTLNKGESVGVHPHKNNEDTYIIVSGEGIFTDGSGKETVVKAGDVTIARPNQSHGLRNEKDEPLVFLDIIAQNHALKIEK
>NZ_CP013121.1|WP_005900732.1|293391_293721_-|hypothetical-protein
MSNLDFTLICIVKFFSKKRKTPPNLSNGNYYPHLVIKGDTEYLGVCFIDGEEVIFDKEIIASALPLYEGVDYSGLTKGTEFMIMEGGNKVGEGVIDEIFQHIPAKELKK
>NZ_CP013121.1|WP_060495749.1|293740_295102_-|glutamate:sodium-symporter
MTSKIFMDLLNSLGLLGLFLILGTFLRAKIKFFQTTFIPASVIGGFLLLILGPICLNVIKIPEEWLKIFSLIPGVLIVPIVASVPLGLKSSSEKKSMKNILPLAFIGIAIAMLQFGFGFSAQYIFPNYDFYKTFGWELGIGFVGGHGTAGLLGNMLQSANLDFWEIAQGVATTTATFGLVGGILIGMLLINIASRKNFTAILKKPGDIPESFKIGFVKDIENQPKLGRETTLTSSVDTLAFHAAIIFGVCLISSQLQSFIKVHKIPVFDQISIWAYAMIIMFIVWKIFGKLKIDFLIDSNTKSRISGSLTEFAVTAAIASLPIKAVFTYLVPILFIVIVGFIVTTLFLFYMCKFFIKDYWFEHMIATFGMATGVFLTGILLLRICDPDFKSPVLANYSLSYTITSIVYFVFLNVILTLLLTKGLFFGMSFTFIVGILFTLAAIISSKILLKDK
>NZ_CP013121.1|WP_187102932.1|295137_296334_-|amidohydrolase
MEVIMDFKEVEKIIDKYIDEIIDFRRDIHSHPELSGNEKRTSEKVIEKLNKLPVEIITNVNGYGIIANLKGNTNKKTILLRGDMDALPINEINDLPFISKNKNIMHACGHDMHTSILLGTSFVLSYFKDKLNGNIKFMFQPSEEASPIGGSKGMIAEGLLENPKVDEAYALHVFGIPTGSVAIKPGVATSRSDRIDIEIFGKSSHASIPSEGRDAIVVAGNIITSIQSIISRNMPPNQTAVITIGKMEGGSRYNVLADYVKLEGTVRTFSTENADMIKERLQKIVEDIASAYGCSAKLNYQNGYDFVYNDPDLSEAAIKSLNEILGKENVLVQSNPLPAGEDFSFVTKKVPSVFMWLGTESDFNKGKCTLHSPEFIADETSLKIGITTFCKLVFDRLN
>NZ_CP013121.1|WP_060495751.1|296502_297702_+|HTH-domain-containing-protein
MIKLAILTPQNSYENIKKCLKGIECEIKYIFYDNLYDLESLYLKNAQEYDGIITSGPIGYEIIKNSVELFTPLYHFDISKGDLYKYLFNILKENPKIDFSRVYIDFISPEKKEYWFQDIFKKEKEPIFYQINFSNKNLYETLKSNYINLKKENKIDMVLTRISNMIKFLKNEEISFDFLFPSEENIKNTVLEVIKDIKILKSEKKQIIFGKLLLDEISIDIEEEIHSISKNCIVKILEKNIEIMMIYEDFINSNIALNLKKKLKEKFYSGWGKGNNINEARYNAEKSYKKNVDLNSEVIYLVSTNSEIILSEIDTEKKKNIEIIEKLKELNITKQNSKKLIELFKSKEKVSCASLANYLAISERTANRLLLKLEENNLAISDLVKINRGRPKKLYKFSF
>NZ_CP013121.1|WP_060495752.1|297750_298371_-|hypothetical-protein
MKKIFILLIVLLGLLVIGCGKKWDYQVTKKESIQIGNDITFYLLTLKEKESGNEIEPLQITKEGFDKYNIEDKLTKEELDSIKISEDSLVNSDLTLKGNYCIVENTSSTDLKFIPENTEFSILAVGKQEDVTPTIPTMILIDKEHKLFYIIILKNQWDAEEFEYTINKDDLKNIEARHMATGNYDENDLSSIENLKNDIHFVEEEK
>NZ_CP013121.1|WP_005900727.1|298973_299714_-|VWA-domain-containing-protein
MNKFLIALLVTIFGFSFSNKAFAKSVIVEKKKNNIVDVVFILDRSGSMGGLESDTIGGFNSMLEKQRKIEGKAFITTVLFDDQYELLHDRVNIAKVNNITEKEYFVRGSTALLDAIGKTIAKEKAIQDTLGKNEKADKVLFVIITDGLENASKEYNSSTVKKLIETQKEKYGWEFLFLGANIDAIETANTIGISAERAVNYKSDSIGTKKNYDTLNKAVEEVRSGKDLDKNWKADIEADYNERNKK
>NZ_CP013121.1|WP_023036531.1|299883_300603_+|complement-resistance-protein-TraT
MKKNLKTILFSLLLIFAFVSCSTMHTVISKRNLDVQTKMSDTIWLEPAAANEKTVFIQIRNTSGKNLNIEQKITNILASKGYRIVNDPSEAKYWLQANILKVDKVNLDSDNGFSDAVLGAGIGGVLGAQRSGGAYTAIGWGLAGAAIGTLADALVDDTAYAMVTDILITEKTGRNVQTATRNSVKQGNSGSMTSTSSGSSNMEKYSTRVLSTANQVNLNFNSAIPILEDELGKVVGGIF
>NZ_CP013121.1|WP_060495753.1|300640_302329_+|phospho-sugar-mutase
MFLDEYKKWLDSNMLSASEKEELKSIANNEKEIESRFYTDLSFGTAGMRGVRGIGRNRMNKYNIRKATQGLANYIIKETGEVGKKKGVAIAYDSRLDSVENAINTAMTLAGNGIKVYLFDGVRSTPELSFAVRELKAQAGIMITASHNPKEYNGYKVYWEDGAQIVDPQATGIVSSVEAVDIFNGIKLMEEKEAIDKGLLVYVGEKLDDRYIEEVKKNAINPNVENKDKVKFVYSPLHGVAARPVERVLKEMGYTNVYPVKKQEKPDGNFPTCDYANPEDTNVFKLSTELADKVGAKICIANDPDGDRVGLAVLDNDGKWFFPNGNQIGILFAEYILNHKKNIPENGTMITTIVSTPLLDTIVKKNGKKALRVLTGFKYIGEKIRQFENKELDGTFLFGFEEAIGYLVGTHVRDKDAVVASMIIAEMATTFENNGSSIYNEIIKIYEKYGWRLETTVPITKKGKDGLEEIQKIMKSMRAKTHTEIAGIKVKEYRDYQKGVDNLPKADVIQMVLEDETYLTVRPSGTEPKIKFYISVVDSDKKVAEEKLARIEKEFINYAENL
>NZ_CP013121.1|WP_060495754.1|302312_303416_+|radical-SAM-family-heme-chaperone-HemW
MLKIYNTYIHIPFCERKCNYCDFTSLKGTDNQIEKYVNYLLKEIEIYKKKYDLSEKQDTIYFGGGTPSLLPIDSLEKILSKFSYDKNTEITIEVNPKTVNSNKLKEYRKLGINRLSIGIQTFNDDNLKLLGRIHNSEEAIEVYNLARECRFDNISLDIMFSLPNQTLSILQDDLERLVNLNPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEFLKSKDYIHYEISNFSKKDFEARHNSIYWENKQYLGVGLSAAGYLANVRYKNFFNLKDYYNNLDKNILPIDEREILTEEDIEEYRYLVGFRLLNKVIVPSEKYLDKCVSLSKEGYLLEKENGYILSHKGLMLFNDFISNFIDI

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Crispr_ID: NZ_CP013121_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_3

1067797-1069888

Unclear

Consensus_repeat	Method
ATTTAAATTCTAATATAGAAATACATAAAT	CRISPRCasFinder
ATTTAAATTCTAATATAGAAATACATAAAT	CRT
ATTTAAATTCTAATATAGAAATACATAAAT	PILER-CR

31 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP013121_3

>merge|NZ_CP013121|3|1067797-1069888|CRISPRCasFinder,CRT,PILER-CR
ATTTTTTTTCTAATATAGAAATACATAAATGACATTTGGATATACAAGCAGAAGTTAATACTCCTGATTTAAATTCTAATATAGAAATACATAAATTAAAAGATGATAATAAAATAAAACAACTTTTAAAAATATTTAAATTCTAATATAGAAATACATAAATTCGCCATTTTTCATTAAAGGAATTATTTTAACTACACCATTTAAATTCTAATATAGAAATACATAAATGAAACCAAACAATAATTAATACCTTAATTAATTTCATATTTAAATTCTAATATAGAAGTACATAAATGAAGAGGGGACTGTTCAAGAAAAAATGTTTCCAGGATTTAAATTCTAATATAGAAATACATAAATGAGGCAACAAAGAGAATTTCTTAATTATAGTCAATCATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATGATAATGTTGCAGATAAAGATGCAGTTATAAAAATGATATTTAAATTCTAATATAGAAATACATAAATTGGAAGAACTTAACAAGAATGATTATAAGTTTTGTAATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTTATTTAAATTCTAATATAGAAATACATAAATAAAGAACCTTATTTCCAAGTTCCTAAAAGCTTTATCATTTAAATTCTAATATAGAAATACATAAATTAAATTATTAAGAGATAATGCTGAGTTAACAAATATATTTAAATTCTAATATAGAAATACATAAATTTAAAAATTTTTTTATACTTTTTTTCATTGATATTATATTTAAATTCTAATATAGAAATACATAAATTTTAACTTCCATTTCTTTTTATTTATTAGTTTTATATATTTAAATTCTAATATAGAAATACATAAATTTCAACAATAATTTCTGTCAATAAGTTACAGAAATAATTTAAATTCTAATATAGAAATACATAAATCTGATGCTGTAACTTCTTTTACAGGGTCTATTTGTCCATTTAAATTCTAATATAGAAATACATAAATTCCAATAACTCTGCTCTGCTATGAAAAAACTAGAACTCATTTAAATTCTAATATAGAAATACATAAATGACATGGAATGACACATATATATGCACAAAAATATGATTTAAATTCTAATATAGAAATACATAAATTGGATGTCTACTCCTGCTGTTAAAATTAAAGCTTTATCATTTAAATTCTAATATAGAAATACATAAATTAAACATGTGCTCCACAATGTGCACAGATAAATTCACGATTTAAATTCTAATATAGAAATACATAAATGAAGCTGTTTTAAAAGGTCAAGAATACACAATAGAATTTAAATTCTAATATAGAAATACATAAATATTTAATAAAAAATCTAGTAAGGATCTCAGCTATAATCATTTAAATTCTAATATAGAAATACATAAATATCCTTATTTACTCTCCTTCCTGATATTGTTCCATTATTTAAATTCTAATATAGAAATACATAAATTAAAATACTTTGATACTAAAAAACAAAAAGAAGAAAATTTAAATTCTAATATAGAAATACATAAATTTGATAAAGAAGCAGTTGATGAGAAAGGTAACCCTGTTATTTAAATTCTAATATAGAAATACATAAATTTAAAAAAGATAAGTAATTTATCCCCCTCTCCCAGATTTAAATTCTAATATAGAAATACATAAAT

>NZ_CP013121|3|1|1067797-1069888|CRISPRCasFinder
ATTTTTTTTCTAATATAGAAATACATAAAT	GACATTTGGATATACAAGCAGAAGTTAATACTCCTG
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAAGATGATAATAAAATAAAACAACTTTTAAAAAT
ATTTAAATTCTAATATAGAAATACATAAAT	TCGCCATTTTTCATTAAAGGAATTATTTTAACTACACC
ATTTAAATTCTAATATAGAAATACATAAAT	GAAACCAAACAATAATTAATACCTTAATTAATTTCAT
ATTTAAATTCTAATATAGAAGTACATAAAT	GAAGAGGGGACTGTTCAAGAAAAAATGTTTCCAGG
ATTTAAATTCTAATATAGAAATACATAAAT	GAGGCAACAAAGAGAATTTCTTAATTATAGTCAATC
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	GATAATGTTGCAGATAAAGATGCAGTTATAAAAATGAT
ATTTAAATTCTAATATAGAAATACATAAAT	TGGAAGAACTTAACAAGAATGATTATAAGTTTTGTA
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAATTATTAAGAGATAATGCTGAGTTAACAAATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAATTTTTTTATACTTTTTTTCATTGATATTAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTTAACTTCCATTTCTTTTTATTTATTAGTTTTATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTCAACAATAATTTCTGTCAATAAGTTACAGAAATA
ATTTAAATTCTAATATAGAAATACATAAAT	CTGATGCTGTAACTTCTTTTACAGGGTCTATTTGTCC
ATTTAAATTCTAATATAGAAATACATAAAT	TCCAATAACTCTGCTCTGCTATGAAAAAACTAGAACTC
ATTTAAATTCTAATATAGAAATACATAAAT	GACATGGAATGACACATATATATGCACAAAAATATG
ATTTAAATTCTAATATAGAAATACATAAAT	TGGATGTCTACTCCTGCTGTTAAAATTAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAACATGTGCTCCACAATGTGCACAGATAAATTCACG
ATTTAAATTCTAATATAGAAATACATAAAT	GAAGCTGTTTTAAAAGGTCAAGAATACACAATAGA
ATTTAAATTCTAATATAGAAATACATAAAT	ATTTAATAAAAAATCTAGTAAGGATCTCAGCTATAATC
ATTTAAATTCTAATATAGAAATACATAAAT	ATCCTTATTTACTCTCCTTCCTGATATTGTTCCATT
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAATACTTTGATACTAAAAAACAAAAAGAAGAAA
ATTTAAATTCTAATATAGAAATACATAAAT	TTGATAAAGAAGCAGTTGATGAGAAAGGTAACCCTGTT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAAAGATAAGTAATTTATCCCCCTCTCCCAG
ATTTAAATTCTAATATAGAAATACATAAAT

>NZ_CP013121|3|1|1067797-1069888|CRT
ATTTTTTTTCTAATATAGAAATACATAAAT	GACATTTGGATATACAAGCAGAAGTTAATACTCCTG
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAAGATGATAATAAAATAAAACAACTTTTAAAAAT
ATTTAAATTCTAATATAGAAATACATAAAT	TCGCCATTTTTCATTAAAGGAATTATTTTAACTACACC
ATTTAAATTCTAATATAGAAATACATAAAT	GAAACCAAACAATAATTAATACCTTAATTAATTTCAT
ATTTAAATTCTAATATAGAAGTACATAAAT	GAAGAGGGGACTGTTCAAGAAAAAATGTTTCCAGG
ATTTAAATTCTAATATAGAAATACATAAAT	GAGGCAACAAAGAGAATTTCTTAATTATAGTCAATC
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	GATAATGTTGCAGATAAAGATGCAGTTATAAAAATGAT
ATTTAAATTCTAATATAGAAATACATAAAT	TGGAAGAACTTAACAAGAATGATTATAAGTTTTGTA
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAATTATTAAGAGATAATGCTGAGTTAACAAATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAATTTTTTTATACTTTTTTTCATTGATATTAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTTAACTTCCATTTCTTTTTATTTATTAGTTTTATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTCAACAATAATTTCTGTCAATAAGTTACAGAAATA
ATTTAAATTCTAATATAGAAATACATAAAT	CTGATGCTGTAACTTCTTTTACAGGGTCTATTTGTCC
ATTTAAATTCTAATATAGAAATACATAAAT	TCCAATAACTCTGCTCTGCTATGAAAAAACTAGAACTC
ATTTAAATTCTAATATAGAAATACATAAAT	GACATGGAATGACACATATATATGCACAAAAATATG
ATTTAAATTCTAATATAGAAATACATAAAT	TGGATGTCTACTCCTGCTGTTAAAATTAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAACATGTGCTCCACAATGTGCACAGATAAATTCACG
ATTTAAATTCTAATATAGAAATACATAAAT	GAAGCTGTTTTAAAAGGTCAAGAATACACAATAGA
ATTTAAATTCTAATATAGAAATACATAAAT	ATTTAATAAAAAATCTAGTAAGGATCTCAGCTATAATC
ATTTAAATTCTAATATAGAAATACATAAAT	ATCCTTATTTACTCTCCTTCCTGATATTGTTCCATT
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAATACTTTGATACTAAAAAACAAAAAGAAGAAA
ATTTAAATTCTAATATAGAAATACATAAAT	TTGATAAAGAAGCAGTTGATGAGAAAGGTAACCCTGTT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAAAGATAAGTAATTTATCCCCCTCTCCCAG
ATTTAAATTCTAATATAGAAATACATAAAT

>NZ_CP013121|3|3|1067863-1069888|PILER-CR
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAAGATGATAATAAAATAAAACAACTTTTAAAAAT
ATTTAAATTCTAATATAGAAATACATAAAT	TCGCCATTTTTCATTAAAGGAATTATTTTAACTACACC
ATTTAAATTCTAATATAGAAATACATAAAT	GAAACCAAACAATAATTAATACCTTAATTAATTTCAT
ATTTAAATTCTAATATAGAAGTACATAAAT	GAAGAGGGGACTGTTCAAGAAAAAATGTTTCCAGG
ATTTAAATTCTAATATAGAAATACATAAAT	GAGGCAACAAAGAGAATTTCTTAATTATAGTCAATC
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	GATAATGTTGCAGATAAAGATGCAGTTATAAAAATGAT
ATTTAAATTCTAATATAGAAATACATAAAT	TGGAAGAACTTAACAAGAATGATTATAAGTTTTGTA
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCCTTTTT
ATTTAAATTCTAATATAGAAATACATAAAT	AAAGAACCTTATTTCCAAGTTCCTAAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAATTATTAAGAGATAATGCTGAGTTAACAAATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAATTTTTTTATACTTTTTTTCATTGATATTAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTTAACTTCCATTTCTTTTTATTTATTAGTTTTATAT
ATTTAAATTCTAATATAGAAATACATAAAT	TTCAACAATAATTTCTGTCAATAAGTTACAGAAATA
ATTTAAATTCTAATATAGAAATACATAAAT	CTGATGCTGTAACTTCTTTTACAGGGTCTATTTGTCC
ATTTAAATTCTAATATAGAAATACATAAAT	TCCAATAACTCTGCTCTGCTATGAAAAAACTAGAACTC
ATTTAAATTCTAATATAGAAATACATAAAT	GACATGGAATGACACATATATATGCACAAAAATATG
ATTTAAATTCTAATATAGAAATACATAAAT	TGGATGTCTACTCCTGCTGTTAAAATTAAAGCTTTATC
ATTTAAATTCTAATATAGAAATACATAAAT	TAAACATGTGCTCCACAATGTGCACAGATAAATTCACG
ATTTAAATTCTAATATAGAAATACATAAAT	GAAGCTGTTTTAAAAGGTCAAGAATACACAATAGA
ATTTAAATTCTAATATAGAAATACATAAAT	ATTTAATAAAAAATCTAGTAAGGATCTCAGCTATAATC
ATTTAAATTCTAATATAGAAATACATAAAT	ATCCTTATTTACTCTCCTTCCTGATATTGTTCCATT
ATTTAAATTCTAATATAGAAATACATAAAT	TAAAATACTTTGATACTAAAAAACAAAAAGAAGAAA
ATTTAAATTCTAATATAGAAATACATAAAT	TTGATAAAGAAGCAGTTGATGAGAAAGGTAACCCTGTT
ATTTAAATTCTAATATAGAAATACATAAAT	TTAAAAAAGATAAGTAATTTATCCCCCTCTCCCAG
ATTTAAATTCTAATATAGAAATACATAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_060496171.1\|1066348_1067353_-\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236609
NZ_CP013121.1\|WP_060496164.1\|1053556_1054819_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|115789
NZ_CP013121.1\|WP_060496165.1\|1054827_1055859_-\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP013121.1\|WP_060496173.1\|1071369_1071864_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP013121.1\|WP_032889025.1\|1076465_1078010_-\|type-I-CRISPR-associated-protein-Cas8a1/Csx8	cas8b2	cd09744_cas8b2_CAS-I-B	gnl\|CDD\|286705
NZ_CP013121.1\|WP_060496176.1\|1080166_1080940_-\|NAD-dependent-protein-deacylase	unknown	unknown	gnl\|CDD\|238702
NZ_CP013121.1\|WP_032889019.1\|1074436_1075537_-\|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|274218
NZ_CP013121.1\|WP_060496175.1\|1077999_1078752_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP013121.1\|WP_060496168.1\|1058710_1059472_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|376814
NZ_CP013121.1\|WP_032889022.1\|1075549_1076452_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09650_cas7_CAS-I	gnl\|CDD\|273846
NZ_CP013121.1\|WP_060496169.1\|1061362_1064938_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP013121.1\|WP_060496174.1\|1071906_1074345_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP013121.1\|WP_060496166.1\|1055860_1057837_-\|aconitate-hydratase	unknown	unknown	gnl\|CDD\|235974
NZ_CP013121.1\|WP_032889031.1\|1078851_1079787_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005899015.1\|1070365_1071358_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP013121.1\|WP_060496167.1\|1057853_1058714_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP013121.1\|WP_060496163.1\|1052479_1053436_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|273796
NZ_CP013121.1\|WP_060496170.1\|1065084_1066281_-\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP013121.1\|WP_060496162.1\|1051243_1052458_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP013121.1\|WP_081037905.1\|1070082_1070403_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_060496171.1\|1066348_1067353_-\|phosphate-acetyltransferase	gnl\|CDD\|236609	PRK09653, eutD, phosphotransacetylase.	8.24587e-158
NZ_CP013121.1\|WP_060496164.1\|1053556_1054819_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|115789	pfam07158, MatC_N, Dicarboxylate carrier protein MatC N-terminus. This family represents the N-terminal region of the bacterial dicarboxylate carrier protein MatC. The MatC protein is an integral membrane protein that could function as a malonate carrier.	1.5507e-16
NZ_CP013121.1\|WP_060496165.1\|1054827_1055859_-\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	8.97487e-72
NZ_CP013121.1\|WP_060496173.1\|1071369_1071864_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.00432e-62
NZ_CP013121.1\|WP_032889025.1\|1076465_1078010_-\|type-I-CRISPR-associated-protein-Cas8a1/Csx8	gnl\|CDD\|286705	pfam09657, Cas_Csx8, CRISPR-associated protein Csx8 (Cas_Csx8). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry describes proteins of unknown function which are encoded in the midst of a cas gene operon.	0
NZ_CP013121.1\|WP_060496176.1\|1080166_1080940_-\|NAD-dependent-protein-deacylase	gnl\|CDD\|238702	cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.	1.27974e-110
NZ_CP013121.1\|WP_032889019.1\|1074436_1075537_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|274218	TIGR02593, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5, N-terminal domain. This model represents a shared N-terminal domain, about 43 amino acids in length, common to a number of related protein families each of which is associated with a distinct subtype of CRISPR/cas system, where CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeat and Cas is an abbreviation for CRISPR-associated. Members of this family are widely distributed enough that we designated the family Cas5. Homology appears remote, or absent, between the more C-terminal regions different subfamilies of these proteins, which typically are 210 to 265 amino acids in total length. Cas5 proteins of six different CRISPR/cas subtypes so far defined are described by respective full-length models TIGR01868, TIGR01876, TIGR01895, TIGR01874, TIGR02586, and TIGR02592. The best characterized protein in this family is DevS or Myxococcus xanthus, a Cas protein that appears to participate in a species-specific developmental pathway.	3.26332e-09
NZ_CP013121.1\|WP_060496175.1\|1077999_1078752_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.31881e-22
NZ_CP013121.1\|WP_060496168.1\|1058710_1059472_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|376814	pfam02548, Pantoate_transf, Ketopantoate hydroxymethyltransferase. Ketopantoate hydroxymethyltransferase (EC:2.1.2.11) is the first enzyme in the pantothenate biosynthesis pathway.	1.92444e-74
NZ_CP013121.1\|WP_032889022.1\|1075549_1076452_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|273846	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This model represents one such family, represented by MJ0381 of Methanococcus jannaschii. This family includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development. [Regulatory functions, DNA interactions, , ].	6.45339e-59
NZ_CP013121.1\|WP_060496169.1\|1061362_1064938_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP013121.1\|WP_060496174.1\|1071906_1074345_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.14064e-120
NZ_CP013121.1\|WP_060496166.1\|1055860_1057837_-\|aconitate-hydratase	gnl\|CDD\|235974	PRK07229, PRK07229, aconitate hydratase; Validated.	0
NZ_CP013121.1\|WP_005899015.1\|1070365_1071358_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	5.9129e-174
NZ_CP013121.1\|WP_060496167.1\|1057853_1058714_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.50017e-27
NZ_CP013121.1\|WP_060496163.1\|1052479_1053436_-\|L-lactate-dehydrogenase	gnl\|CDD\|273796	TIGR01771, L-lactate_dehydrogenase, L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis].	2.35335e-152
NZ_CP013121.1\|WP_060496170.1\|1065084_1066281_-\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP013121.1\|WP_060496162.1\|1051243_1052458_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.94665e-43
NZ_CP013121.1\|WP_081037905.1\|1070082_1070403_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	7.6762e-31

>NZ_CP013121.1|WP_060496171.1|1066348_1067353_-|phosphate-acetyltransferase
MSFLGQVRKKALQANRRIVLPESSDERVIRAASQILKENLAQVILVGNQEAIMHSAKAYEVSLSGVKIVDPYNFERLNDYVNKLVELRSKKGMTPEEAKKLLQTDPNFFGAMLVKMGDADGMVSGSASPTANVLRAAIQVIGTQPGVKTVSSVFIMELSQFKDLFGSILVFGDCSVIPVPTSEQLADIATSAAETAVRIAGINPRVALLTFSTKGSAKHECVDRIIEAGRILRERKVQFRFDDELQADAALVKSVGEIKAPLSDVSGNANVLIFPTLSAGNIGYKLVQRLAGANAYGPIIQGLNSPVNDLSRGCSVEDIVVLTAITSAQACIDC
>NZ_CP013121.1|WP_060496170.1|1065084_1066281_-|acetate-kinase
MKILVINCGSSSLKYQLINPETEEVFAKGLCERIGIDGSKMEYEVVAKDFEKKLETPMPSHKEALELVISHLTDKEIGVIASVDEVDAIGHRVVHGGEEFAQSVLINDAVLKAIEANNDLAPLHNPANLMGIRTCMELMPGKKNVAVFDTAFHQTMKPEAFMYPLPYEDYKELKVRKYGFHGTSHLYVSGIMREIMGNPEHSKIIVCHLGNGASITAVKDGKSIDTSMGLTPLQGLMMGTRCGDIDPAAVLFVKNKRGLTDAQMDDRMNKKSGILGLFGKSSDCRDMENAVKEGDERAILAESVSMHRLRSYIGAYAAVMGGVDAICFTGGIGENSSMTREKALEGLEFLGIELDKEINSVRKKGNVKLSKDSSKVLVYKIPTNEELVIARDTFRLAK
>NZ_CP013121.1|WP_060496169.1|1061362_1064938_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MAKKMQTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYTDEWASRGVKNIFGVPVKLVEMQSEGGAAGTVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARSLSAQALSIFGDHQDIYAARQTGFAMFATNSVQEVMDLAGVAHLAALKSRVPFLHFFDGFRTSHEIQKVEVMEYDDLKKLIDWKALEEFRKRALNPEHPVTRGTAQNDDIYFQTREVQNKFYDAVPDIVADYMKEISKITGRDYKPFNYYGAPDAERIIIAMGSVCEAAQEVIDYLVEKGEKVGLISVHLFRPFSAKYFFDVLPKTVKRISVLDRTKEPGSLGEPLLLDIKALFYNKENAPLIVGGRYGLSSKDTTPAQILAVFENLKKDEPKDAFTVGIVDDVTHTSLEVGPAIALADPSTKACLFYGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKKPIRSTYLVSKPTFVACSVPAYLHQYDMTSGLKEGGKFLLNCVWSKEEAIENIPNNVKRDLAVNKARLFIINATALAQEIGLGQRTNTIMQAAFFKLAEIIPFEEAQQYMKDYAKKSYAKKGDEIVQLNYNAIDRGANDIVEIEVDPAWANLEVTPLNEPKETAGCGGCCPTPSDFVKNIAKPINAIKGNDLPVSAFLGYEDGTFENGTSAFEKRGVAVDVPIWDVDKCIQCNQCSYVCPHAAIRPFLINEDELKASPEPLATKKPVGKGLDGLAYRIQVSALDCVGCGSCAHVCPAPGKALVMRPIAESLEAHEDVKTDYLYNNVDYRSDLMPVDTVKGSQFSKPLFEFHGACPGCGETPYIKLITQLYGDRMMVANATGCSSIYSGSAPSTPYTTNKNGEGPSWGSSLFEDNAEYGFGMHVGVEALRSRIQHAMEENMDKVDEDIATLFKDWIANRQFSVRTREIRDILVPKLEALNTDFAKEILDLKQYLIKKSQWIIGGDGWAYDIGYGGLDHVLASNEDINILVVDTEVYSNTGGQASKSTPTGAVAKFAAAGKPAKKKDLAAIAMSYGHIYVAQVSMGANQQQALKAIKEAEAHQGPSIIIAYSPCINHGIKKGMSQAQTEMKLATECGYWPIFRYNPSVEKLGKNPLQIDCKEPKWEKYEEYLTGEVRYQTLTKSNPEEAKILFETNKRDAQKRWRQYKRMAALDYSEEKETE
>NZ_CP013121.1|WP_060496168.1|1058710_1059472_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKKVDLNYILEKVKNGEKLSRTALYDYPMANIAEKAGIEIINVGDTMAKYVLGYDNTNKIGMDILVEHAKAVRKGAPNTFVMGDMPFLSYRNIDVAIKNAGRFIVEADVDAVKLEGGLEIIPIIKALVDVGIPVIGHTGFSLQSREIGLGKTNEEKAKDFFKICREMEKAGVIAIVYTEVPLEVAKQNYEEATVPIFAAGCGEYTDSPMMNFYELLGFTEKRRKFAKAYGNLLEKSIEATRKFIEDVKRGEIK
>NZ_CP013121.1|WP_060496167.1|1057853_1058714_-|LysR-family-transcriptional-regulator
MKDTDWIILNELYKEPNLTKVSEKLYYSQPSLTKIIQNIEEEFDTRILLRSSKGVKFTLEGEYLAKRAKEYLKFMEETKNKMKSFKYETRGKLNLGSSYTYSKYFLPDILYNYSKENNVNFNIITKQSEDLFRDIHNLDGAFIHGKYDGNIESILVDEEKAYILSKNKIELEDLKNMPMINYSTNNKTKDILNNWWYQNFNSEPTNQIFSGYVDVAWQLVNRNLGYVCCFLSENFINDYGLCMTPMLDENGEQLIRETYFIYSKTQDKSNIFDDFLEYLKTRVIKK
>NZ_CP013121.1|WP_060496166.1|1055860_1057837_-|aconitate-hydratase
MKMNLTQKIIYNHLDDEQKKIFLEKKGKVEEIDIRIDQTLTHDITAVMAYNAFEALELDRVRTEKSISYIDHNVLCTDHRTSDDHLFLKTIAQKYGIYYSTPGNGICHSVHIARFAIPGKTLLGADSHTASSGAVGMFAFGGGGVEVARAMAGLRIKLNMPKIVKVNLMGKLNGGVNAKDIALELLKKYSVKGGVGKVFEYAGESLKYLEIPQRMTITNMGAEMGATTSIFPTDEITKEFFKAQNRLLDFAEFVVDEGATYDDEITIDISKITPLVACPSQPDNIADVNEKKFKDLKVSSVFIGSCTNASYGDIKKAAEILKGKKVSEEVELTIGISTRAIFLQLLEEGIITELVKSGARITEIACGACDGIGGAPVSKGITVRTSNRNFKGRSGTVDAEIYLVSPEVAAATAITGRLTVASDVMTDVEKLNNILEPVEYIVDDSEIIKPLDLEEAKKIQIIRGDNIKPLPLNIKIPNKLNIKVSLKTKDNISTDDITPNDANFSAMRSNIPEISKYAFSRIYPDFVARAKEYGKSVIIGGENYGQGSSREHAAIAPMYLGVKAVIVKSIARIHKKNLINHGVIPMIFKNPEDYDKISLSDELYWDNMDEALEKGIISIKDDTKDFTFEALIELSEEEKEIIKAGGLLPFIKKTFKEA
>NZ_CP013121.1|WP_060496165.1|1054827_1055859_-|beta-propeller-fold-lactonase-family-protein
MFVYTGCRTTKERNARGEGIEVYKIDENDNWNKIQTLKTIENPSYLCFDNDKKFLYSVHGDLTFVSSYKIENDGKLILLNSIDINSKNPVFITVDKNNEFLIVATLQGGSLFSIKRNSDGSLGEIFDTFIFEGKTENSNSFAHQCIFDNNKDYLFVPTQARTKGYERLNLIKYQNGKFTLSDYFDARLYSEPRHIAIHRNNRYVYMSNEKGNDITFLEFDSKRGKLKARQTLPTLPETYTATSDVAAILMDNNSEYVLVSNRFSDIITTYKIDKETGYLKVINYTDVLGKTPRFMTFKKDTNRLFCANEESDTIVEFELDNNGFLKYTDKIINSKSPVCILFK
>NZ_CP013121.1|WP_060496164.1|1053556_1054819_-|TRAP-transporter-large-permease-subunit
MEMLSYVSLITLIIAIVLGFLKKTNVGIIAITMAFFLGKYFGIKDKDIIKGFSSSLFLTMTGVSYLFGLLSANNTLENLSAKIVSITGKNKILLPIIMFLLGALLCAVGPGAIPTLAIMPIIAVPIAVAAGYNPVMLAIIAQCGVMGARMSPLTPEAAVVIELMTNQGLDGKMLPIFLSHIVTGFLISVFAFIYYKGWRIEKNLEVNTNNEIKFNKEQILSLLGLAIMIISVIMFKVNVGLMAFAVGTILVLLGAGDEKKAISKIPWNVILLVLGVGVLMNIVSLSGGIILMAEGMTKIMTAKTAPSIMAVSASVMSFFSSGLGVVFPTLIPTSSIIADSLGISYYAKELVTMVTVGGTFTGISPISTTGALIMSAVISDEQVKDKFPQNKLFLELVFWAFFTIILEVILAYLGVYKLFF
>NZ_CP013121.1|WP_060496163.1|1052479_1053436_-|L-lactate-dehydrogenase
MLQTRKVGIVGVGHVGSHCALSMLLQGVCDEIVLMDIIQEKAKAHAIDCMDTISFLPHRAIIRDGGIQELSKMDIIVISVGSLTKNEQRLEELKGSLEAIKSFVPDVVKAGFNGIFVTITNPVDIVTYFVRELSGFPKNRVIGTGTGLDSARLKRILSEVTNIDSQVIQAYMLGEHGDTQVANFSSATIQGVPFLDYMKTHSEQFKEIELSVLEKQVVRTAWDIIAGKNCTEFGIGCTCSNLVKAIFHNERRVLPCSAYLDGEYGYSGFYTGVPAIIGSNGIEEILELPLDERERKGFEAACAVMKKYIEIGKSYKII
>NZ_CP013121.1|WP_060496162.1|1051243_1052458_-|MFS-transporter
MQSKESNIKLLLLGRAVSLFGSTIYLIVLPLYILNITNNLKTTGIFFAAVNFPITIISIFIGTIIEKFNKKNIILICDFLTSMLYFILFLYFKNFSSLTFLFLISLIINIISKFFEIASKVLFSEINTPETLEKYNGLQSFIENTIMIIGPVIGTYLFATFDFNLILIIVSLGYFLSFLQELFIKYEKNLDLSIEKTNFLEDFKEGISYIRSNKIILNFFILVMFLNFFIANNDEIINPGILIRKYEISEKLFGFSATSYGAGSVFAGIFIFYNKKIRFLKKLKSLFILNSSLMCLLGLLSIILFKYNHYIYFTTFIFFQFLIGMITTFVNVPLISSFQKNVEIKYQSRFFSILSFFSGGLIPLGVLYAGYLSSYIGADITYIINNLAIITIVCLVFKNIERDC
>NZ_CP013121.1|WP_081037905.1|1070082_1070403_-|CRISPR-associated-endonuclease-Cas2
MKRNINLFKCGGDKMYVVAVYDISLDEKGNRNWRKIFGICKRYLHHIQNSVFEGELSEVDIQRLKYEVSKYIRDDLDSFIIFKSRNERWMEKEMLGLQEDKTDNFL
>NZ_CP013121.1|WP_005899015.1|1070365_1071358_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKRSFFLYSNGTLKRKDNTITFINEKDEKRDIPIEMVDDFYVMSEMNFNTKFINYISQFGIPIHFFNYYTFYTGSFYPREMNISGQLLVKQVEHYTNEQKRVEIAREFIEGASFNIYRNLRYYNGRGKDLKFYMDQIEELRKHLKEVNNVEELMGYEGNIRKIYYEAWNIIVNQEIDFEKRVKNPPDNMINSLISFVNTLFYTKVLGEIYKTQLNPTVSYLHQPSTRRFSLSLDISEVFKPLIVDRLIFSLLNKNQITEKSFVKDFEYLRLKEDASKLIVQEFEDRLKQIITHKDLNRKISYQYLVRLECYKLIKHLLGEKKYKSFQMWW
>NZ_CP013121.1|WP_060496173.1|1071369_1071864_-|CRISPR-associated-protein-Cas4
MDKDITGLMVYYYEVCKRKLWYFVNEIQLEENNSNVILGKLLEENTYTRDEKKINIDGVINIDFIRSKKILHEIKKSNSIEPASLLQVQYYLYYLEKKGLIGLKGILDYPLLKQTVEVNLTDKDRENLDNIIIGIKEILGKESPPALEKNGICKKCAYFDLCFV
>NZ_CP013121.1|WP_060496174.1|1071906_1074345_-|CRISPR-associated-helicase/endonuclease-Cas3
MLDEELLKKYKAKVDKSIFEHNQDLKKQKDVLINLGYLNDKENIELLSYAIDYHDSGKINLKFQRRIEENIKKINGAKFNSKYLKFNKENEIEHNILSAFLINSQDFNSEKEYLAVLYSVIFHHRYSDAISTINNQIFPNIEEILEDNLPKGVVTYEGDIPLELNFQDLNTVENIKLLGLLMKCDHSASGGYEIEYPNDFLEDALNNLLNEFKEKDKSADWNDMQKFCKENNDKNIIAIADTGMGKTEGGFLWGGNNKIFFVLPLRTAINAMYKRFDEVIIKGENKEERVGLLHSNSLEYYLNNKKELVIDDKDEKEMDILEYNKRGKHLSLPITICTPDQIFNFILKYKGYESKLATLSYSKIILDEMQMYDASLLAAVIFGITKIIEMGGKIAIVTATFPPIIEYFLNKYLMKDNKNVIKDLDKPEEIVEEPIFIKKKFTNNEKIRHNIVLIDDEIGIEHILWQFKKNKKENKKSNKILVICNTIKKAQEIYLKLKEEDDLKDKINMLHSNFIREDREEKEKEILDFGKTEFDGEGIWISTSLVEASLDIDFDYLFTELQDLNSLFQRFGRCNRKGKKSVDKANCFIYLKIEDKYLKEKGSKYGFIDKDIYENSKKGLENYCKVISKDEIENSQDYSKLLKNYSKKITEGDKIKLIEENLSFENLKESNFVDEFEKTYEKYQRILNSDENSQDDLKLRDIQSVTVIPYNIYEENKENIKELIKKIEDKNLGLEERQKAKTELLKKTLSIQYYQLSKYISEILKGKADANKYKSESINKFEKITVMEADYDKELGFHAKDFKDGVPTYEFI
>NZ_CP013121.1|WP_032889019.1|1074436_1075537_-|CRISPR-associated-protein-Cas5
MEALRIILKQSSANYRKAGTVDNKMTYPLPIPSTVIGALHNICGYTEYHSMDISIQGKFTSLSRRVYTDYCFLNSALDDRGNLVKVVDPDTFSGAFIKVASAKKSQGNSFKDRITIQVHNEELLQEYCSLKEKSKEIEELKNSEYKKKLEEFKVLKKEIADKKKKEDKKSETFKQLSEEEKKIKLDEEKYKEEFKNFEYESYTKPYSYFQNLVTSLKNYEVLNDIFLILHIKADKQTLKDIEENIYNLQSLGRSEDFVEVVECKMVELQEFSRNIRVSKFSMYLKNEDVSDKKIIPLAVDQDHQAGGTKYYLDKNYKLEKNRRIFKKVLVVYSNFIGAKNSSENVKLDYLEILSQDKKQEILVNFL
>NZ_CP013121.1|WP_032889022.1|1075549_1076452_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKKNALTLTVVANMTSNYSEGLGNISSVQKIYRDRNVYAIRSRESLKNAIMVQSGMYEDLETEANGATQKKVDENLNATNCRALEGGYMNTKESTYVRNSSFYLTDAISTESFINETRFHNNLYLATNYANTHTDKNGKTLNVQKDAGEVGLMPYQYEYEKSLKVYSLTIDLEKVGKDPNFPDKEADNNEKFERVKSLLEAVENLSLVVKGNLDNAEPVFAIGGLSLRKTHYFENVVRVEQGALVLGEALKEKKEDGFNCALLKGDIFTNEVEIIKELQPISMREFFKSLIEDVKNYYGV
>NZ_CP013121.1|WP_032889025.1|1076465_1078010_-|type-I-CRISPR-associated-protein-Cas8a1/Csx8
MKYDIDKNEYGFDTAISASDWKYSAAITGLIYYFKKLEKKYEIKKITIHEITDSYLVYNKEDVNEESYLNFIERFYSEEALAHKKLENQLKHTKEFTPEIIKSVKENMSANTVLKKVFSKTKFDGTNKEEVLKLLDENRHSIIKETFRNKKDLYDNYCQTSRLLEKGDNSPCRLKGYYFDPNRKSKATGYNFASSSVDYFDDEIFDFIPFAFTGSPFETIFLNDNLDLEILENMNYKLREYFSEEKEEEIEKIKNFKQEKAIKEKKNEETEGNQNSVPLKKLFLNILQKKVDYIKYGMEIIYKNRDKEYFETWYLRNESIKVLKEIKDFSKLDIRIKITDKYYFNVLDEVFSSILNLSSLTNSILYLLKDRESFIRIDATRENLSKLFKYNYAINELIKVNQIIRNGGKEMDENLKKSIKACSIAVVKKFIKENSLNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFAFDYIENQTQNEDIIHYFILELDQSRLESKKNKENEDKE
>NZ_CP013121.1|WP_060496175.1|1077999_1078752_-|CRISPR-associated-endoribonuclease-Cas6
MRFILSFELDTVRLPIEIRRTIISFFKKSLTEAHNSKYYPDFFTGTQIKDYSFSVIFPLDKYFREEIYLKKPEMKVVVSCSEKNNIGFLLVNVFLSQRNKKFPLPKDTHMILKDVRIIEEKIIREEEAVFQTTIGGGVVVREHNKEENKDIYYSVGNERFEEVLNWLMKERFKRLGYPEDIFKDFSCELLDGRKIVVKHFDLKFPVTTGKFKVKAPKILLEEIYRTGMGSRLSQGFGLLEYLGGEIKDEV
>NZ_CP013121.1|WP_032889031.1|1078851_1079787_-|hypothetical-protein
MGFFTDNNIATILGGGLCGGITGVITLIGVRWQVIREEKRQEKDKCLGILENLKYTLDRNLEINNDNGIYYLFSYIIEDWWVSNYKKEFYLTFNENIFKNDYKDLIKFKFYKEIYEMRVKLQNIEKNYNFLSINLNKKNLLFNNLFKEIKNKYEENINSENIMLKNYFEWLNIFSEFLYNLSLPLFILIRSGDCSYFKDKVIEKLEEIKKYYGSSYFKEVNKDEIDKVFNNKKSDIKEKVVRLVELINYTAIRLTEEIKSNNFRNKIETNIDELYFYAVSEQDLINDLEYINNKIKNLKEKIEAEIEEYKK
>NZ_CP013121.1|WP_060496176.1|1080166_1080940_-|NAD-dependent-protein-deacylase
MDAKRDEKILELVNILKNTKYLVFFGGAGTSTDSGVKDFRGKNGLYKTLYKDKYRPEEVLSSDFFYSHRDIFMEYVEKELNINGLKPNKGHMALVELEKMGILKAVITQNIDDLHQVSGNKNVLELHGSLKRWYCLGCGRTADRNFSCECGGIVRPDVTLYGENLNQAIVNEAIYQLGQADTLIVAGTSLTVYPAAYYLGYFRGKNLIIINDMDTQYDGKASLVIKDNFSYVMDKAVEGLKNSNMEKHKKIFKINYD

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Crispr_ID: NZ_CP013121_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_4

1557893-1557973

TypeV

Consensus_repeat	Method
ATTTCAAGGATTTTTCCGTTGCC	CRISPRCasFinder

1 spacers

WYL,cas14j

The CRISPR arrays of NZ_CP013121_4

>merge|NZ_CP013121|4|1557893-1557973|CRISPRCasFinder
ATTTCAAGGATTTTTCCGTTGCCCTGTCAACAGCTTCAGCTCCCATAGTCTGAAATGAATTTCAAGGATTTTTCCGTTGCC

>NZ_CP013121|4|2|1557893-1557973|CRISPRCasFinder
ATTTCAAGGATTTTTCCGTTGCC	CTGTCAACAGCTTCAGCTCCCATAGTCTGAAATGA
ATTTCAAGGATTTTTCCGTTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_060496389.1\|1551447_1552170_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP013121.1\|WP_060496398.1\|1562878_1564600_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP013121.1\|WP_060496399.1\|1564592_1565441_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP013121.1\|WP_060496388.1\|1549778_1551455_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP013121.1\|WP_060496390.1\|1553889_1554642_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP013121.1\|WP_060496394.1\|1558432_1558651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496393.1\|1557221_1557830_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376232
NZ_CP013121.1\|WP_060496392.1\|1556628_1557171_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496401.1\|1568214_1569243_-\|DUF4325-domain-containing-protein	unknown	unknown	gnl\|CDD\|379507
NZ_CP013121.1\|WP_032847261.1\|1553052_1553706_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP013121.1\|WP_060496396.1\|1559250_1560393_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895694.1\|1552192_1553056_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224982
NZ_CP013121.1\|WP_060496395.1\|1558822_1559143_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP013121.1\|WP_005899570.1\|1569378_1569972_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP013121.1\|WP_060496391.1\|1555513_1556086_+\|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl\|CDD\|234587
NZ_CP013121.1\|WP_005895688.1\|1554761_1555514_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP013121.1\|WP_060496400.1\|1566437_1567541_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP013121.1\|WP_032889755.1\|1556095_1556602_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|224692
NZ_CP013121.1\|WP_060496397.1\|1560443_1562834_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|177094
NZ_CP013121.1\|WP_187102911.1\|1558668_1558830_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_060496389.1\|1551447_1552170_+\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	2.76986e-74
NZ_CP013121.1\|WP_060496398.1\|1562878_1564600_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	0.000235676
NZ_CP013121.1\|WP_060496399.1\|1564592_1565441_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	5.43395e-20
NZ_CP013121.1\|WP_060496388.1\|1549778_1551455_+\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	0
NZ_CP013121.1\|WP_060496390.1\|1553889_1554642_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.77e-43
NZ_CP013121.1\|WP_060496393.1\|1557221_1557830_-\|hypothetical-protein	gnl\|CDD\|376232	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4. A predicted endoRNase of the Barnase-EndoU-ColicinE5/D-RelE like nuclease fold found in polyvalent proteins of phages and conjugative elements. The predicted active site contains a conserved histidine residue.	7.116e-12
NZ_CP013121.1\|WP_005899570.1\|1569378_1569972_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	1.84429e-37
NZ_CP013121.1\|WP_032847261.1\|1553052_1553706_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.8532e-20
NZ_CP013121.1\|WP_060496401.1\|1568214_1569243_-\|DUF4325-domain-containing-protein	gnl\|CDD\|379507	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 99 and 341 amino acids in length. This domain is distantly related to the STAS domain.	9.8515e-08
NZ_CP013121.1\|WP_005895694.1\|1552192_1553056_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	4.81774e-111
NZ_CP013121.1\|WP_060496395.1\|1558822_1559143_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	8.28467e-16
NZ_CP013121.1\|WP_060496391.1\|1555513_1556086_+\|crossover-junction-endodeoxyribonuclease-RuvC	gnl\|CDD\|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	2.40627e-83
NZ_CP013121.1\|WP_005895688.1\|1554761_1555514_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.84945e-62
NZ_CP013121.1\|WP_060496400.1\|1566437_1567541_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.72081e-55
NZ_CP013121.1\|WP_032889755.1\|1556095_1556602_+\|HAD-family-hydrolase	gnl\|CDD\|224692	COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only].	2.35576e-82
NZ_CP013121.1\|WP_060496397.1\|1560443_1562834_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|177094	CHL00195, ycf46, Ycf46; Provisional.	2.35111e-113

>NZ_CP013121.1|WP_060496393.1|1557221_1557830_-|hypothetical-protein
MKENIELLMKKLNKAYLIYKNEFLNKDFLVIARKGKNIESIEINFRKEHFRHLVGIKGIKANEFFEKISQNRLSIKELKQLGKNPYIIEKLNSFSKLKKLLEENPYLYDFHPHSTPKVELDKIIANIDREIKKELIGLKFLKNLSGKSYVPASIERRKASEITTEDRKRIICILEKSLIDREYSKIIFKVDEEDISLYFKEI
>NZ_CP013121.1|WP_060496392.1|1556628_1557171_+|hypothetical-protein
MINFEKINKMIDLIEESQIMEGLTFNEFAMEFYSEVKLVPLSRYLKTNNRVKRMPKIMNMRKAGELLLFTKTDDETLSFLKRKGYSEMPSLDYKTIMLLRKLDPIDNWKKVLAFFNGDKTVEEINLSTRPILFPQEIKKLEDYIKDELNLNDDDFEKFMSTCSVAIKNKEIMKAIKKLSR
>NZ_CP013121.1|WP_032889755.1|1556095_1556602_+|HAD-family-hydrolase
MENIKILVLDVDGTLTDGKIYVDDKDNSFKAFNVKDGFALVNWLKLGGEVAILTGKKSNIVERRAEELGIKYVIQGSKNKTQDLKKLLDRLNISFENTAYMGDDLNDLSVMKNVGLSGCPKDSVQEVLEISNFISSKNGGDGSVREFLEYIMKNNGMWKKILEKYSNE
>NZ_CP013121.1|WP_060496391.1|1555513_1556086_+|crossover-junction-endodeoxyribonuclease-RuvC
MRVIGIDPGTAIVGYGIIDYDKNKYSIVDYGVVLTSKDLSTEERLEIVYNEIDKILKKYRPEFMAIEDLFYFKNNKTVISVAQARGVILLVGKQNNIAMTSYTPLQVKIGITGYGKAEKKQVQQMVQKFLGLSEIPKPDDAADALAICITHINSLGSKLSFGGTNNLKKIVVPSGTNKISLEEYKNLLKK
>NZ_CP013121.1|WP_005895688.1|1554761_1555514_+|MgtC/SapB-family-protein
MPNILEMIDKFLNLKFAGELTVEVVCFRLVLAIILGGIVGYEREKNNRPAGFRTHILVCFGAAIVSMIQDQLRLNILDLARTEGSAVASVIKTDLGRLGAQVISGVGFLGAGSIMKEKGETIGGLTTAAGIWATACVGLGIGWGFYNIAIVAILFMIIIMVSLKRVESKFVKKSRLLKFEVKFFDSDDFANGLIEAYEIFRQKSIKISEIDKYQDEGIVTFTVSMKGRNNISDVVVSLSSIKNVEYVRDV
>NZ_CP013121.1|WP_060496390.1|1553889_1554642_+|SDR-family-oxidoreductase
MKIFIVGGSSGIGLSLAKRYASLGNEVAICGTNEEKLKKIEQSNNNIKIYKVDVRSKEDLKSAIDDFSKGNLDLIINSAGVYTNNRTTKLTDKEAYAMIDINLTGVLNTFEAVRDMMFKNNRGHIAIVSSVAGLLDYPKASVYARTKMTIIGVCETYRAFFRDYNINITTIVPGYIATDKLKSLSEEDITKKPTVLSEEESTNIIIKAIEEKKEKIIYPLSMKILISIITKLPKKVLTYILMKQANWGKK
>NZ_CP013121.1|WP_032847261.1|1553052_1553706_-|Crp/Fnr-family-transcriptional-regulator
MISKEDIKHLEKIFPFWLDMKQNDRAKIILSSRILSLKKNSIFFNSHELDGLLFLKSGKLRFFLSSLDARELPLYYLNNMEVEFFENFNDKTISTILDIAFIVEKNSEILLIPYSVLNLFRDKYSIMEKFLHNLTREKLSKSLLSLQNILLIPLKDRLLNFLYSLNKTEISLTHEEIAKNLGSSREVISRNLKVLEKENFLKINRKKIIILDRGEVL
>NZ_CP013121.1|WP_005895694.1|1552192_1553056_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MKKPIIGISASMIYEEKDELFLGDKYSCVAYSYVDAVYKSGGIPVTLPILKDVSAIREQVKLLDGLILSGGRDVDPHFYGEEPLEKLGAIFPERDVHEMALIKAAIDLKKPIFAICRGMQILNVTYGGTLYQDISYAPGEHIKHCQIGSPYQATHSIKIDKHSTLFRMADKLEIERVNSFHHQALKQVAKGLKVVATAPDGIIEAVENEDGAFIIGVQFHPEMMFDKSTFARGIFKKFINICIESKPGEVILKDELHHIEENEEKNIDEKIKEIEDEEKKEFFKGDL
>NZ_CP013121.1|WP_060496389.1|1551447_1552170_+|response-regulator-transcription-factor
MINCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDMNGISLGKIITKMYPDMKIVFITAYKDYAVDAFEIKAFDYLLKPYSESRIKNLLKSLVNVKTELTSSIKNSSLKKITVNIDERLYVISLNDIDYIEASEKETLIFSNQKKYVSKIKISKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKELFSM
>NZ_CP013121.1|WP_060496388.1|1549778_1551455_+|sensor-histidine-kinase
MNIQFISHLISNIGCSAMIAFFFIKIDRANIIIKSKAKTKKDIIALSFFFSLLSISGTYIGLNFNGAILNTRNVGVIAGGILGGPYVSIITGLIAGIHRAFVNLGRETAIPCAIATITGGFLTAYVHRFIKSKDRIFFGFLLACIVENISMGLILLIHKDKVLAQNIVASFYIPMVFMNSIGASVLILIVEDIIQKSEIVAGNQAKLALEIANKTLPYFRETENLSEVCKIIASSLGAKATVITDKRDIIAGFSFDKVDIVKSPIRSNNTKEVLKTGEVMLVIKDNDEIIEDFLYISPHIKSCIILPLKEKNDVNGTLKIFFDTAEKITEKNRYLMIGLSHLISTQMEISKVENLMSLVKYSELKALQSQINPHFLFNVLNTMASLIRTNPEKAREVTIDLSRYLRYNLDNNVKSVELIKELNQIDNYIKIEKARFGDKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRENGCVKIIVKKIDKDIEVIIEDDGVGIEQTVIDNLDKQIQENIGLKNVHQRLKLLYGEGLDIKKLEQGTRIKFKILGGVKYD
>NZ_CP013121.1|WP_060496394.1|1558432_1558651_-|hypothetical-protein
MENVVILRLDETEKAIIKNCANSKGLTMSEFMKKVVLDYIEDEYDLKVYREYLKEKENGTLKTYSHKEVWGE
>NZ_CP013121.1|WP_187102911.1|1558668_1558830_-|hypothetical-protein
MSKLKNNEYLDFDDYFNNETKVSKEDKAIIELETLLIGKMIEIREKKEENFDK
>NZ_CP013121.1|WP_060496395.1|1558822_1559143_-|nucleotidyltransferase-domain-containing-protein
MDKKYILDKLSQIDKNKYSISELGLFGSYAKDNADDNSDIDILVKLEFKKGMYQNFCELQKELEKIFNRKVDLIEKGTFDYEFKNNNVREYKEKIKEEILGSVIYV
>NZ_CP013121.1|WP_060496396.1|1559250_1560393_-|hypothetical-protein
MSEAKKLKEEFCVFFDVLGTKSKFLTSNFEEEEKLVKKYENFIKDIKEILINNGFKENEIKLFSDSIFINFPNTTLKEIYDIFRCLAYIQIMAIEKYNFLLRGGVEYSTICNEKDIVIGKGLVVAVELEKEANYPIIMLGERAKEELSKKDDFINKQYINDFIKNEPEIENIDSAIAKIKIMREKNGESIATIIRINDKTYINYLATYYENQNRESFIKMMLRHKKFIIESLKKNEEEFLKDTKNSNNNELKNYFDYTYYNINKNYILEYIKEIDEQNKKILHTGSPIKQKNIEFKEKLENNYKEKKELKKELVEVDKKIKQINFCVKGNSKENILKVREKYIYLLYYHNSFLRRVFEKDKGIDKNNYDECFLNVEKEIL
>NZ_CP013121.1|WP_060496397.1|1560443_1562834_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
METNLVKYLRARRPIIWVNSGDYKEIDTIVKEAIKDYKDKAIYEYRALGAVDFETKVKEENISDLYSFLDTLYSEGIKRNVFLLIKNTEEEMKDAKNIAYIKKIAETRYSSPDYNFTIIVVSEVETVPKELEKFTSILDIPNMSKDEIEKYILKFSKDNNIKVDEKDIGEVAISLKGLTKLEIDHVLNMIIESKNNISISGRDIIIKEKGQIIKKSSILEIIDFKEKIEDIGGLEGLKEWLKSKAQVFRRLDEAKKFGVDTPKGVLLVGMPGCGKSLAAKSSARLFNVPLLRLDIGRLLGKYVGESEHNMRVALKTAESISPCILWIDEIEKAFAGINQDGGASDITKRLFGQFLTWLQEKENTVFVVATANDITAFPPEFLRKGRFDEVFFIDFPNEEEREKIFKIHLEKRGKLNDKINLKELAEKTIGYCGADIEEVVKMTVETIFNVEDIENEEDSKLMTQDLLDSIKSIDSLSNILADKIEVLKKGYEKFKIKSASKKIAPTQRIKEKFKVDKVLELDNMVFVRGGKYKPSFADEEKEVCNLEVCKYPVTQDMWMEVMEKNPSYFKGDKRPVEKVTWWSAIKFCNEMSKKYKLEPVYNITYDDFDKPILKINQIGESPVEPDKADFKKTEGFRLPTEVEWEWFARGGEVAIQDGTFDKRYSGSDNPDKVAWHNGNSKEETHEVGTKNPNQLGLYDCSGNVWEWCYDKASCYSASYLREGNKKELIQSGKLYKYDIKESGIRGEAWTYDKDYFSDGSGEMRIDYDNKISINRGGYLTKTYSHYTIGFRIVRTV
>NZ_CP013121.1|WP_060496398.1|1562878_1564600_-|hypothetical-protein
MFSLRGSRKRKTEEIIKKFLKSYAENEKSQDKKDLKTWLILELQNELPNKKAEDIEKIATELISGIETYYTKKKEVEKYQSLGITNGHYVGNEILEKVADEIEEAEIVDTKEIIEDMKETSNILSNYNEVIIYETAAIKEPQLVANILSANSVNNYIDTINTAIDNANKTLMESVTTKVGTINQNPNLDGFIFEEYHAGTFNVDATVKQKPYHAEALKPELGETYGKNSIDLVIEDTGKYVKKYSAKAYKNANETAKSFYDKMTGYKYKFQSKLVPTEQTSEIANSVDKIKYNNVESKGITKAEIKEIQNDLQTGNKKADIINFKNNVNTISISKQIGKQAMVNGTMGLGIGMVTNIGINLITEKEVDAEQVIEAGIKTGASMGMATAVAGGIRVAVEKKVIPTVFSRVLTNNTIGAIAAASMDIIGTAFKLGSGEITLGKAIKDIGKSVGAAYGAIVASGWGYAGGMAIAGMIGLGTIGAVGTILGVGVAIVAGAVCAAVGSKVGGAIANGIGAVAGAIVDGAVGIVKAGGELVKSVASGVWNGVKAVGSGIVSVGKSIISGIGSFFGGLFG
>NZ_CP013121.1|WP_060496399.1|1564592_1565441_-|WYL-domain-containing-protein
MKKVRFTISDFMNEIIKSDSEYFKLQIGKIGNIIFNYYIDKNLNKVELEDSSGEVIQFNLNKSNEEIFMDTLIRNKIETEAEYWRNIFFTYINNLRYKREEILFEKNFKNIEKALKDGNKIKIKYHNYIRLINPYFIKVSDSESRSYLFCYCEKNKDYRNYRVSEIEEIWFTNEKIEIKDKKYIDEVYKNFDPFLSYKNRVKVKFTEKGLELYEKVLINRPKLLAKDNNIYTFECDSKLAMIYFAQFFSLIEILEPQALREKLQNELENTLKIYKNREDKDV
>NZ_CP013121.1|WP_060496400.1|1566437_1567541_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYKFRFYPTKTQIKILNCTFGCVRYVYNYFLDLKQKLYKAEKKSMSYNECSKELTVLKKDKEWLKDVDKFSLQNSLKDLDKAYKNFFSGKGYPKFKSKKDNRKSYRTNYTNNNIEFLDKWIKVPKLGKLKIRDKIKPQGRIISATITQVPSGKYYISLCCTDIEIKKLESINRNVGIDLGIKDFAITSDEAIIENPKYLQKSLNKLAILQRKLSRKSKGSSNRNKARIKVARLFEKISNQREDFLQKLSTMLIRKYDIICIEDLQVKNMVRNHKLAKNIVDVSWSEFSRILEYKAKWYGRTIVRVDRFFASSQICNCCGNKNEEVKDLSIREWTCPVCEAVHNRDINAAKNILKEGLRILGISA
>NZ_CP013121.1|WP_060496401.1|1568214_1569243_-|DUF4325-domain-containing-protein
MSFTKEHKVEIINTILRAIKEKKNPYNETLSFYKISRQTVYKYIKELIEKKLIKKVDNKNYTLSFYNLKEENYKNVNLQEDIIYKSLLEEFEKDKKENVIHILTYSFTEILNNAIEHSESKDIKISYAEDYFSIYVQILDDGVGIFKKIKKNYNLKNENEAIFELKKGKITSDPENHSGEGIFFSSKVVDYFLIDSYNKNFYSGNKDYFYHFEQNKKENIKGTLVYFIIDKNTNRTTKEVFDSYTDDDYVFNKTEITVHLAEEYLGEHLISRSIARRILSNIEKFKVIFLDFNGVKTIGQAFADEIFRVFRNKHKEITILPINMNEEVKFMIKRVNKNIVME
>NZ_CP013121.1|WP_005899570.1|1569378_1569972_-|leucine-rich-repeat-domain-containing-protein
MDQNIWEYDDFIFKGDELKGMTQKGKDKVKLEAKTDLVIPELTPDGLPLKKIADNAFYRRGLTSVVIPNTVESIGYDAFGVCKLKEVKLPEALINIEGFAFYRNKLTKVEFGSKVKRLEPSSFAMNELTEITFPETLEYIGASAFFKNSLETVSFPKSVTKIDMYAFRKNNIHKVEVANSVDLHKFAFETFTTVERF

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Crispr_ID: NZ_CP013121_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_5

2041551-2041648

TypeV

Consensus_repeat	Method
ATCACCTAATATACATATTTAAGAGTTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013121_5

>merge|NZ_CP013121|5|2041551-2041648|CRISPRCasFinder
ATCACCTAATATACATATTTAAGAGTTACACTTATTAAAGGCATAAGAGGTAGATAAATTTAATCTTTATCACCTAATATACATATTTAAGAGTTACA

>NZ_CP013121|5|3|2041551-2041648|CRISPRCasFinder
ATCACCTAATATACATATTTAAGAGTTACA	CTTATTAAAGGCATAAGAGGTAGATAAATTTAATCTTT
ATCACCTAATATACATATTTAAGAGTTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_023037053.1\|2045718_2046759_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224376
NZ_CP013121.1\|WP_023037059.1\|2041826_2042996_-\|PilN-domain-containing-protein	unknown	unknown	gnl\|CDD\|370886
NZ_CP013121.1\|WP_029491826.1\|2048368_2048860_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895027.1\|2036540_2037026_-\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|225753
NZ_CP013121.1\|WP_023037055.1\|2044483_2044984_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|366666
NZ_CP013121.1\|WP_023037062.1\|2037304_2038936_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|313108
NZ_CP013121.1\|WP_023037057.1\|2043514_2044072_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023037051.1\|2048186_2048369_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496619.1\|2033237_2034872_-\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511
NZ_CP013121.1\|WP_023037063.1\|2035739_2036459_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|226146
NZ_CP013121.1\|WP_023037061.1\|2039145_2040693_-\|type-II-secretion-system-protein-GspD	unknown	unknown	gnl\|CDD\|224367
NZ_CP013121.1\|WP_060496620.1\|2040746_2041547_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023037058.1\|2042988_2043546_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023037056.1\|2044073_2044487_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_023037054.1\|2044968_2045445_-\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP013121.1\|WP_005895021.1\|2035031_2035622_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_032834102.1\|2030077_2030911_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NZ_CP013121.1\|WP_005901008.1\|2029298_2030075_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224026
NZ_CP013121.1\|WP_032834099.1\|2031123_2032053_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225531
NZ_CP013121.1\|WP_023037052.1\|2046755_2048000_-\|type-II/IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|225363

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_023037054.1\|2044968_2045445_-\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	5.27912e-11
NZ_CP013121.1\|WP_005895027.1\|2036540_2037026_-\|PepSY-domain-containing-protein	gnl\|CDD\|225753	COG3212, COG3212, Predicted membrane protein [Function unknown].	1.16815e-24
NZ_CP013121.1\|WP_023037055.1\|2044483_2044984_-\|prepilin-peptidase	gnl\|CDD\|366666	pfam01478, Peptidase_A24, Type IV leader peptidase family. Peptidase A24, or the prepilin peptidase as it is also known, processes the N-terminus of the prepilins. The processing is essential for the correct formation of the pseudopili of type IV bacterial protein secretion. The enzyme is found across eubacteria and archaea.	0.00066253
NZ_CP013121.1\|WP_023037062.1\|2037304_2038936_-\|AAA-family-ATPase	gnl\|CDD\|313108	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase. This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain.	7.37761e-77
NZ_CP013121.1\|WP_023037053.1\|2045718_2046759_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224376	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].	1.6767e-101
NZ_CP013121.1\|WP_023037063.1\|2035739_2036459_+\|DUF1275-domain-containing-protein	gnl\|CDD\|226146	COG3619, COG3619, Predicted membrane protein [Function unknown].	1.05426e-66
NZ_CP013121.1\|WP_032834099.1\|2031123_2032053_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|225531	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	9.07516e-118
NZ_CP013121.1\|WP_023037061.1\|2039145_2040693_-\|type-II-secretion-system-protein-GspD	gnl\|CDD\|224367	COG1450, PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion].	2.78029e-77
NZ_CP013121.1\|WP_060496619.1\|2033237_2034872_-\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_CP013121.1\|WP_032834102.1\|2030077_2030911_-\|ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	9.38095e-120
NZ_CP013121.1\|WP_005901008.1\|2029298_2030075_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	2.36064e-135
NZ_CP013121.1\|WP_023037059.1\|2041826_2042996_-\|PilN-domain-containing-protein	gnl\|CDD\|370886	pfam10211, Ax_dynein_light, Axonemal dynein light chain. Axonemal dynein light chain proteins play a dynamic role in flagellar and cilia motility. Eukaryotic cilia and flagella are complex organelles consisting of a core structure, the axoneme, which is composed of nine microtubule doublets forming a cylinder that surrounds a pair of central singlet microtubules. This ultra-structural arrangement seems to be one of the most stable micro-tubular assemblies known and is responsible for the flagellar and ciliary movement of a large number of organisms ranging from protozoan to mammals. This light chain interacts directly with the N-terminal half of the heavy chains.	0.000302745
NZ_CP013121.1\|WP_023037052.1\|2046755_2048000_-\|type-II/IV-secretion-system-protein	gnl\|CDD\|225363	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].	0

>NZ_CP013121.1|WP_060496620.1|2040746_2041547_-|hypothetical-protein
MDLDLKNKNLKIIVLIFLYLLVFYFLIFKNILKLAEIKELVEQKDIKIGKLNYEKNVVLKALDIKRKDFEKDRERIENQEEKSDKDEFDNIPNLFNYIEEKISKNNIIFQSFGRSRKDGDKLKVAMSFNGSERNIKNFFREIENENYDINFSSSYLKISVNNNLLEVKTTLSASVLDKTEKIDSLIDNNTSNKDIFKRTNKNSEGEEVSYSYMRIGDKTYYRVSKKKEIENKTTTENKEDKKSKNKKSSKKEEDKESIDNKKEKVE
>NZ_CP013121.1|WP_023037061.1|2039145_2040693_-|type-II-secretion-system-protein-GspD
MKKFTLIIFLILNTFIFPAALNRDIDIIDMPLHEVLAILSKETGKNLICSKEAKDIVIDTYFNKGEDVNSVLQFLAETYDLSIKKENNTTIFMLQSEKNSKKAKIIGKVTSNSLALKNAKVELKDLNKVVYTDSSGNFIIDNIPKDVYVCKISKKGYEERGEIIDTVKSINVLNVDLKENQNNYENKDTSDDLSNSNFYEIDGKFYYTKTFSLFNVSPDEVSRILHETFGDNIKVSTLNKVNKLVVSAERDILENAISIIEDIDKNPKQVKITSQILDISNNLFEELGFDWVYKQNVESQERNSLTAIILGKAGLNGVGSTVNIVRQFNNKSDVLSAGINLLEATNDLVVSSVPTLMIASGEEGEFKVTEEVIVGVKSHRDDKKDRYSEPVFKEAGLIMKVKPIIKDNDYIILEISLELSDFKFKRNVLNLKDINSGTYNSEGGSKVGRGLTTKVRVKNGDTILLGGLKKSIQQNIESKIPILGDIPIISFFFKNTTKKNENSDMYIKLKVEIDE
>NZ_CP013121.1|WP_023037062.1|2037304_2038936_-|AAA-family-ATPase
MKKGIGVGIEDFKKIIEEDCYYFDKTNYIEELLKDKTEIKLFTRPRRFGKTLNMTTLKYFFDVRNAEENRKLFKDLYIEESEYFKEQGQYPVIFITMKDLKKNTWEQMYFAAKSLISNLYNEFEFIRKKLNEKDLIEFEKIWFKKEDGDYDNSLRLLSEYLYNYYQKKVVLLIDEYDNPLIVANQNGYYKEAINFYRNLYSSALKTNSNLKMGVLTGIVQVAKEGIFSGLNNVKTYNILGDKFEVFFGLNEEEVEEALKYFEMTYEIKEVKRWYDGYKFGNSEVYNPWSIINYLSDRGLQAYWVNTSDNALIYDNLKNSTVDVFKDLEALFEGKAIKKEISPFFTFEELSKFDGIWQLMVYNGYLKINEKLSNDEYMIKIPNYEIQTFFKKGFIDKFLVSGNYFNPMMDALLDGDIEEFERRLQNIFLVNTSFYDLKGEKVYHSLFLGMLIWLRDNYEVKSNGEGGHGRYDAMLIPLDKIKPAYLFEFKVSKTIKGLTAKAEEALEQIKEKQYHVGLKEKGISKIYKIGIAFKSKNVKVKYEI
>NZ_CP013121.1|WP_005895027.1|2036540_2037026_-|PepSY-domain-containing-protein
MKKILIIGAIILGSIGFSTSALAAISEQQAKDIVKKEAPNGQITKFKLDRENGRMVYEIEVMDGNIERDYEIDAETGAIVKLEQEQKNHGNNNSVNNPKISYDKAKEIALKNSKNGKFKEIELKHKNGVLVYDVEIAEGFMDREFLIDANTGEILRDKKDF
>NZ_CP013121.1|WP_023037063.1|2035739_2036459_+|DUF1275-domain-containing-protein
MNKQKLKKFFDNREEFAPNERLWLFCMLMLIAGFWGGFTYSLRGKVFVNAQTGNLVFLSLGIASWDTALIKNALATFLAYFCGIITAEFISKEINKISFLIWERILLFFSLIVTICLGFIPETAPFEFTNFSIAFTAAMQFNTFEKAHGMGMATPFCTNHVKQASANFVRFLKTRDSSKLRISLSHLSMILSFITGATLSIFLGRFFLGKAIWLSSVFLVITLYFFSKSLKNYKAKKLK
>NZ_CP013121.1|WP_005895021.1|2035031_2035622_-|hypothetical-protein
MKAKIKNIDFLKVKDNENTYYGFSQEWYKDIWQQKAGCGATVASSIISYYNQIDDFKELGISDALKIMEELWFYLLPTEHGLNSIKLFYDGIKNYYNNKGVTIDYINVDIKNKPSLDKIIDFIGKELLEDRPIAFLNLCNGEENNLDKWHWVVVVEIFEENGEYFLNIIDDKEILKINLSLWYRTITNDGGFITFK
>NZ_CP013121.1|WP_060496619.1|2033237_2034872_-|formate--tetrahydrofolate-ligase
MTDIQIAQAAKKENIVEIAKKLGLTEDDIEQYGKYKAKVNLDVLQKSKRPNGKLILVTAITPTPAGEGKSTVTIGLTQALNKIGKLSAAAIREPSLGPVFGMKGGAAGGGYAQVVPMEDINLHFTGDMHAIGIAHNLISACIDNHINSGNALGIDITKITWKRVVDMNDRALRNIVIGLGGKANGYPRQDSFQITVGSEIMAILCLSNSITELKEKIKNIVFGTSLDGKLLRVGDLHIEGAVAALLKDAIKPNLVQTLENTPVFIHGGPFANIAHGCNSILATKMALKLTDYVVTEAGFAADLGAEKFIDIKCRLGGLKPDCAVIVATVRALEHHGKGDLKAGLENLDKHIDNIKNKYKLPLVVAINKFVTDTDEQIAMIEKFCNERGAEVSLCEVWAKGGEGGIDLAEKVLRAIDGNKTEFDYFYDINLTIKEKIEKICKEIYGADGVIFAPATKKVFDVIEAEGLNKLPVCMSKTQKSISDNPALLGKPTGFKVTINDLRLAVGAGFVIAMAGDIIDMPGLPKKPSAEVIDIDENGVISGLF
>NZ_CP013121.1|WP_032834099.1|2031123_2032053_-|ABC-transporter-substrate-binding-protein
MKKLLTVLGLMLGLTTLSVAAEKEIKVGITQIVEHPSLDAARKGVEKALKEKGKGKNIKIEYQSAQGDFGTAQLIAKSYASSKKDVIVAISTPSAQAALNATKTIPIVYTAVTDGASAGLKGNNITGTSDMSPLDKQAELIKTLLPNAKKVGFIYNPSEQNSLLLLEKFKGIAKAKGLTVVEKGVSSVNDINLAIDSLLSQIDVLYIPTDNLVYSSASLVIQKANKKNVPVIASTNDIVEKGALATESIDYEKLGYQTGERVIDILNGKNPKDIPVETLKQTTLVVNQKIAKKYNISLDNPKLKNAVKK
>NZ_CP013121.1|WP_032834102.1|2030077_2030911_-|ABC-transporter-permease
MLQATIEQSLIFAIMVLGVYISFRILNFPDMTVDGTFPLGAAISAKLLTLGVNPYLTLLVALVAGAAAGAITGLIHVKLKVKDLLAGILVMTALYSVNLRVMGKSNIPLFEEDNIFNTEYSMMITIVVLILISKFLLDYLLKTKFGFALKALGDNENLIVSLGLNEEKYKIYGLMIANAFVAFSGAVLAQYQGFADVGMGTGIIVIGLASIIIGDTLFGKRRRLAGTTIVIIGSILYRGVIAVTLSMGMDASDLKLITSVIVIVILWIQKQKNKRRK
>NZ_CP013121.1|WP_005901008.1|2029298_2030075_-|ABC-transporter-ATP-binding-protein
MINISNLKKTFYSALGEEKTVFNGLNLEINQGDFISVIGSNGAGKTTLLNTISGNIDLDDGYIEVDGKNINNLAKHKRGEFISKVYQNPALGTAPSMTIFENLSMADNKGKIFGLSLGLNYSRKEYYMNLLKELDLGLENLLDTEVQYLSGGQRQCLALIMATLNQPKVLLLDEHTAALDPKTSKIIMDKTEEIVKKSEIPTLMITHNLQDAIRYGNRLIMLHNGEIILDIKGKEKEELTQDALMEIFQKKATYSDVM
>NZ_CP013121.1|WP_023037059.1|2041826_2042996_-|PilN-domain-containing-protein
MFKKILPLSHIEDIEKKVKNTVLNLENKFFSIFKIQVENIINEEDRKEKIEDRLDVIFPRYNSDDFVLRYEILKKDRKKENIVVYLLDLALLNDYIIDDMKDYGFVSIIPSFFVCREKKNINHYFNFDISETMLVVTEYMNNNILDISTFKLSKSSFDNEEEVDIEDKYSIANSYLVNIEDDIEIIFTGDKINFDELDLTNKNYSYFKVESLDFTKYLNFLPDDIKNKYSLYYVNTKYLYTLLIISIITVLSTIILYHNIHKSEEKLEQLEVESSSLEDEINEARNEMEEIEKQHKDLLEFIEKEEYKDFKISSLLEELSYLCPSGVKISSIEYDENKIFNIEGSTGKIDNVVKFLENITNSKNFKLYNYDYILRKENEIEFKLEIKYF
>NZ_CP013121.1|WP_023037058.1|2042988_2043546_-|hypothetical-protein
MKKYCTMNKNKAFIFLQVIIISFLFISLTLFVQILLNSRFNLYKTDVKTQENFQDYDFLDEIIKQEFKNIEEKINNREIKDVTEYITLSENGEKIFLIEEYNKRISFGGYRLLEDEKGKNYYNHLKDKIKRMYKPKVNVHFIKNIKIADKNYSLFATVEYEIGSSREPDTLHNGILTRMWIKENV
>NZ_CP013121.1|WP_023037057.1|2043514_2044072_-|hypothetical-protein
MYINKNKALSFIEIIVAVTILLAVSFAGLITFYSINKSFLVMNNTYKREKEIMTFRDLVTSHIKWNESLEIRVANISKSNPINSLGDLFLKPSEKEGNLLVLKIKNYNETEKKVEKYYRCFLFYEDKVSLSYFDDSSIHSLINIFTGTVILENCTGKFLVDNNILKVYLKDKDKEYEEILYYEQK
>NZ_CP013121.1|WP_023037056.1|2044073_2044487_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MNKNKAFSLMEVIVSVFILILVLIPSIKLNIQQIKTYSKIRNADSELHFFTSLNNYLKAENILNSHLEFSSYTDFITTFNNFGNSFQNLKNKNFNLIIDIEKTEVDFSNRKEKASLIKVEYRGDKKIYKNTLLKFEE
>NZ_CP013121.1|WP_023037055.1|2044483_2044984_-|prepilin-peptidase
MDRILIILLYILLFLVMYIDINKKYIPNILNFAILVLSIFICGIDKIDIFFIGASCYTLPILIFYGYISDILKKEVFGFGDIKLIISLGGLLYLGEINIFLQIYIFYLLVFLLATLYIIIYIVMSYCRNKPVKIRGVELAFAPYICLAFIIIYNFNLIERIIERIL
>NZ_CP013121.1|WP_023037054.1|2044968_2045445_-|type-II-secretion-system-protein
MKNRGFSLIEIVVAVAIMGILSGIVGLQLRSYIAKSKDTKAVATLNTLRVAAQLYQVDNEDTLIDTASLTTYDEQKVKDALKKLEPYLDNNAKAIIEKPEMAIGGSRASKTGDVIYGGKVRITFKDPNGNSSDGYYMWLEPISPTEACDIKGNKWIEF
>NZ_CP013121.1|WP_023037053.1|2045718_2046759_-|type-II-secretion-system-F-family-protein
MKNKKEKILFFTNELAIMLKSGLTFTTAIEIILKEEKDKNFKEVLKKIHKNLIAGKSIFESFKNFDRIFGNTYLYMLKIGEVSGSIVERLEDISKSLEFDLANQKKLGGILVYPIVVISLTLIIVTFLLTFILPNFITIFEENQVELPLITRILLFISGNFHYILLFIIALILIIFFINMYINNNKLMRIQKDKWLLNIRLFGELKKLSLSSDLYHSFSILLSVGIGIIESVDILYMNNNNYYTKENLLEVKKSLLAGNNIATALKKLNLYNERFSILITAGEESGYLSENLLQISKILKQDFEYRLKKLMSLLEPLVVVFLGLIVAFVVMAIYLPILSIGDVFSQ
>NZ_CP013121.1|WP_023037052.1|2046755_2048000_-|type-II/IV-secretion-system-protein
MGNSSEKIEKYFKKTINSTMNNNKNSYIEDIEELFIRENVNSNKGIFSILLEAIKFSASDIHIEALTDKIRIRYRINGILKEVAEIDKSFLSSIVSKLKILSSLDIVEKRKPQDGRFSLKYKGREIDFRTSIMPTMNGEKIVIRILDKFNYNFTLEDLYLSEENKRIFYKAINQNTGIILVNGPTGSGKSSTLYSILKYKNREEVNISTVEDPIEYQIEGINQVQCRNEIGLGFVTILRALLRQDPDILMVGEIRDKETAEIAVKASLTGHLVFSTLHSNDSLGCINRLVNLGIDSYLLSLVLQMVVSQRLVRKLCPHCKKEDENYKEKLKSLNLSEEKYKNIKFYTSKGCEKCMGTGYIGRIPVFEIIYFDDILKDMLAQKKEIKQNFKTLLDDAMDKVKEGLTSLDEIMRQL
>NZ_CP013121.1|WP_023037051.1|2048186_2048369_-|hypothetical-protein
MKKLMLLLLFLFIYIQIFPLQSKKNLVKIDIIGKSGIKSYYVNFSNEQNLDSFEIYDTSD
>NZ_CP013121.1|WP_029491826.1|2048368_2048860_-|hypothetical-protein
MNIAFVKYREFKELRDINEAKTKITEAFYLVSTTSLKQKTKQKLQLDLSAKKITISNKSLKTQEIKLPKDLIYFHTYTSNLNNLELSFTQNGNIAKSFSIYIFNRAKKVRYKISFYGFDRSKFLKINNYRKKKNNEISYSKILDYHKSTNEDRETFYKDWRKE

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Crispr_ID: NZ_CP013121_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_6

2108168-2108265

Orphan

Consensus_repeat	Method
TTATCATGAAAATGGGAAATTACAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013121_6

>merge|NZ_CP013121|6|2108168-2108265|CRISPRCasFinder
TTATCATGAAAATGGGAAATTACAAGCTGAAATTCCAACTAGAAAAGGTGTAATAGATGGGGTATCAAAACTTTATGATGAAAATGGGAAATTACAAG

>NZ_CP013121|6|4|2108168-2108265|CRISPRCasFinder
TTATCATGAAAATGGGAAATTACAAG	CTGAAATTCCAACTAGAAAAGGTGTAATAGATGGGGTATCAAAACT
TTATGATGAAAATGGGAAATTACAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_005895322.1\|2112989_2113232_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP013121.1\|WP_005900900.1\|2119141_2119807_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496645.1\|2093824_2094514_+\|DUF554-domain-containing-protein	unknown	unknown	gnl\|CDD\|377371
NZ_CP013121.1\|WP_060496646.1\|2094510_2095062_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378105
NZ_CP013121.1\|WP_060496654.1\|2105976_2106786_+\|phophatidylinositol-4-phosphate-5-kinase	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_005900906.1\|2108313_2109327_+\|toxin-antitoxin-system-YwqK-family-antitoxin	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_060496652.1\|2103932_2105432_+\|putative-basic-amino-acid-antiporter-YfcC	unknown	unknown	gnl\|CDD\|236934
NZ_CP013121.1\|WP_060496657.1\|2112006_2112825_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895331.1\|2109327_2110044_+\|toxin-antitoxin-system-YwqK-family-antitoxin	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_060496653.1\|2105456_2105987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005900912.1\|2102281_2102581_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP013121.1\|WP_060496658.1\|2113551_2118711_-\|DUF4132-domain-containing-protein	unknown	unknown	gnl\|CDD\|379270
NZ_CP013121.1\|WP_005900905.1\|2110060_2110558_+\|toxin-antitoxin-system-YwqK-family-antitoxin	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_060496651.1\|2102561_2103446_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|224858
NZ_CP013121.1\|WP_060496659.1\|2120172_2120850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895326.1\|2111409_2111958_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895327.1\|2110596_2111028_-\|flavodoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|235508
NZ_CP013121.1\|WP_005895347.1\|2103461_2103743_+\|septation-protein-SpoVG-family-protein	unknown	unknown	gnl\|CDD\|224999
NZ_CP013121.1\|WP_060496655.1\|2107054_2107780_+\|toxin-antitoxin-system-YwqK-family-antitoxin	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_060496650.1\|2099068_2102014_+\|transcription-repair-coupling-factor	unknown	unknown	gnl\|CDD\|224118

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_005895322.1\|2112989_2113232_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	8.70816e-12
NZ_CP013121.1\|WP_060496645.1\|2093824_2094514_+\|DUF554-domain-containing-protein	gnl\|CDD\|377371	pfam04474, DUF554, Protein of unknown function (DUF554). Family of uncharacterized prokaryotic proteins. Multiple predicted transmembrane regions suggest that the region is membrane associated.	9.46257e-76
NZ_CP013121.1\|WP_060496646.1\|2094510_2095062_-\|hypothetical-protein	gnl\|CDD\|378105	pfam08974, DUF1877, Domain of unknown function (DUF1877). This domain is found in a set of hypothetical bacterial proteins.	0.000307104
NZ_CP013121.1\|WP_060496654.1\|2105976_2106786_+\|phophatidylinositol-4-phosphate-5-kinase	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	8.27651e-16
NZ_CP013121.1\|WP_005900906.1\|2108313_2109327_+\|toxin-antitoxin-system-YwqK-family-antitoxin	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	1.09538e-38
NZ_CP013121.1\|WP_060496652.1\|2103932_2105432_+\|putative-basic-amino-acid-antiporter-YfcC	gnl\|CDD\|236934	PRK11588, PRK11588, putative basic amino acid antiporter YfcC.	0
NZ_CP013121.1\|WP_005895331.1\|2109327_2110044_+\|toxin-antitoxin-system-YwqK-family-antitoxin	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	2.03078e-40
NZ_CP013121.1\|WP_005900912.1\|2102281_2102581_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	2.78e-27
NZ_CP013121.1\|WP_060496658.1\|2113551_2118711_-\|DUF4132-domain-containing-protein	gnl\|CDD\|379270	pfam13569, DUF4132, Domain of unknown function (DUF4132). This domain might be involved in the biosynthesis of the molybdopterin cofactor in E.coli.	4.29364e-54
NZ_CP013121.1\|WP_005900905.1\|2110060_2110558_+\|toxin-antitoxin-system-YwqK-family-antitoxin	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	1.22228e-42
NZ_CP013121.1\|WP_060496651.1\|2102561_2103446_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|224858	COG1947, IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism].	7.64514e-91
NZ_CP013121.1\|WP_005895327.1\|2110596_2111028_-\|flavodoxin-domain-containing-protein	gnl\|CDD\|235508	PRK05568, PRK05568, flavodoxin; Provisional.	5.00194e-30
NZ_CP013121.1\|WP_005895347.1\|2103461_2103743_+\|septation-protein-SpoVG-family-protein	gnl\|CDD\|224999	COG2088, SpoVG, Uncharacterized protein, involved in the regulation of septum location [Cell envelope biogenesis, outer membrane].	2.55114e-44
NZ_CP013121.1\|WP_060496655.1\|2107054_2107780_+\|toxin-antitoxin-system-YwqK-family-antitoxin	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	7.4402e-38
NZ_CP013121.1\|WP_060496650.1\|2099068_2102014_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0

>NZ_CP013121.1|WP_060496655.1|2107054_2107780_+|toxin-antitoxin-system-YwqK-family-antitoxin
MKKLLAGLLLVSSVLSFGATQRVPIEKLVGNGDGQLLYLEGENKPYSGEVERKYPNGKLLGVATMKNGKLEGKAYEYYENGKVKREETYVEGKANGVAKSFYENGKIEYETNFKNSKREGIEKAYSKTGILLSEVPFKNDNATGLVKLYNEQTGKLEYETNIVNGVRNGLSKKYYPSGKLLSEVVFKNDKEEGIMKAYYENGKLQGEAPYKNGQIDGVVKMYDENGKVIEQATFKNGQQVK
>NZ_CP013121.1|WP_060496654.1|2105976_2106786_+|phophatidylinositol-4-phosphate-5-kinase
MKIKKYVLLILSLLFINFLNLNAATTKGNIRKLNSQKAIVEMNLTYKYIENGKYTEIYDENGKLLFRDKSYIPEPDITTSAMKVKIILKNGKKIPITEQYFPSGKIRAITEYNLKVKDEDIEKNDIRKFYTSNKLGQNIYSSIITETYYENGKLKSRMTDTGDKGKLEGYYENGNLITEANLVNEKMGELTKTYPEGIVKAYYPNGTLKSKIEFKKGLANGTYETYYENGNIFEKTTMKNGKPDGKYEVYGPDGKLEESIFYKNGEVVK
>NZ_CP013121.1|WP_060496653.1|2105456_2105987_+|hypothetical-protein
MGNKKYLLIILSLFFINFLNLNATVLLKDNSRQLFPQKAIVELNFTYKYIDNGNFIEVYDEDGKLIYIDKSYILEPEVKASTMKVKIIERESDGKKIPIVEKYYPSGELYSITMYELKNKDEDIEKNDIKKFYTSGKLEKNIYIYIYSEICYESGNLKKRKMQRGNKSKEVEYYEN
>NZ_CP013121.1|WP_060496652.1|2103932_2105432_+|putative-basic-amino-acid-antiporter-YfcC
MKKIKMPDTFVIIFFVVIFASLLTYIVPVGKFEMQEVTYVTNTGAEKTRNVPVPGSFSYELDDKGNELKKGIKIFEPGGEVGVTNYIFEGLASGDKWGTAVGIVAFLLVVGGAFGIILKTGAVESGIYSMISKSKGSELVLIPVIFILFSLGGAVFGMGEEAIPFAMLIIPIVIDMGYDSVTGILITYISTQIGFATSWMNPFSVAVAQGVSGIPVLSGAGFRIFMWIFFTAFGVIYTIYYARRVKRNPESSIAYKTDAYFRDNFKSEEQANREFKLGHKLIILVLILGMAWVVYGVVKEGYYLPEIATQFVIMGLIAGIIGVIFKLNNMSVNDIATSFRKGAEDMVGAALVIGMAKGIVLILGGTSADTPTILNTILNYVASALSNMSAAFCAWVMYIFQSLFNFFVVSGSGQAALTMPIMAPLSDLVGVTRQVAVLAFQLGDGFTNMIVPTSGILMAVLGIAKIEWGVWAKYQIKFQLILFALGSCFVFFAVFTNFS
>NZ_CP013121.1|WP_005895347.1|2103461_2103743_+|septation-protein-SpoVG-family-protein
MKVTNVKIKKVDGDKFDRLRAYVDVTLDDCLVIHGLKLMQGEQGLFVAMPSRKMRNEEFKDIVHPICPELRNDITKVVQEKYFALDQEQEAAV
>NZ_CP013121.1|WP_060496651.1|2102561_2103446_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MRISLNKYKIFSNAKINIGLNVFQKESDGYHNIDSIMAPIDLADEMDITFYSDLGDLKIECSDRNIPTDERNILYKTYKAFFEESKKEKRKIDIILKKNIPSEAGLGGGSSNAGFFLKLLNEHYRNIYNESELEELAMKIGSDVPFFIKNKTARVGGKGNKVDLVENNLKDSIILIKPLDFGVSTKEAYESFDNLKEVKYADFDKIIECLKDNNRIALENSIENSLEQGILETDINIKMLKMTLNSVISGKKFFMSGSGSTYYTFVTELEKSQIETRLKTFVDNVKIIICKTIN
>NZ_CP013121.1|WP_005900912.1|2102281_2102581_+|RNA-binding-S4-domain-containing-protein
MRLDKFLKVSRIIKRRPIAKLVVDGGKVKLDGKVVKAAAEVKVGQILEIEYYNKYFKFEILQVPLGNVSKDKTSDLVKLIETKGLDIEINLDKDEDFFE
>NZ_CP013121.1|WP_060496650.1|2099068_2102014_+|transcription-repair-coupling-factor
MEKKFRGEIPFWLKNKKNNLVYICSSNRNIDDYFFVLKDFYKGKILRIKKENEAGELKKYNYDLLELVNSNEKFIILISLDYFLEDYYSEANSIFIEKGKNIDIKDLEEKLIDAGFEKTYMIAQRKEYSIRGDILDIFNINQDNPVRIEFFGNEVDRITYFDINSQLSIEKKDSIELYIDNNKNKKDFFSLMSMNKNKIEYYYENNDILQAKIKRLINENLDREEDILNKVAELSKIGIQIEIQKFSEEELKQFEVIDRVKKLSENTKITIYSEEATRYKEIFKDYSVKFEKYPLFEGYKTDDKLILTDREIKGIRIKRERVEKKALRYKVVDEIKEQDYVIHENFGVGIFLGLENIDGQDYLKIKYADEDKLFVPVDSINKIEKFINISDIIPEIYKLGRKGFKRKKDKLSEDIEIFAKEIIKIQAKRNLGNGFKFSKDTVMQEEFEETFPFTETPAQLKAIEDVKRDMESGKIMDRLICGDVGYGKTEVAIRATFKAVMDGKQVILLVPTTVLAEQHYERFSERFKNYPVHIEILSRVQSKKEQVESLKRIENGSADLVIGTHRLLSDDIKFKDVGLLIIDEEQKFGVKAKEKLKKIKGDLDVLTLTATPIPRTLNLSLLGIRDLSVIDTSPEGRQKIQTEYIDNNKNLIKDIILSEISREGQVFYIFNSVKRIESKVKEIRELLPEYIKVDYIHGQMLPRDIKKNIQEFENGNIDVLVATTIIENGIDIENANTMIIEGVEKLGLSQVYQLRGRIGRSTKKSYCYMLMNENKTKNAKKREESIREFDNLTGIDLAMEDSKIRGVGEILGEKQHGAVETFGYNLYMKMLNEEILKLKGEAEEELDEVDIELNFPRFLPDSYIEKNEKVKIYKRALALKTLDELENLYNELEDRFGKIKSEAKGFFEFIKIRIIARDLGITTIKQDKENKDRILINFNEKKINVDKIIYLLSNKKIMYSKFTRTIGYNGDIFEFFRIYEK
>NZ_CP013121.1|WP_060496646.1|2094510_2095062_-|hypothetical-protein
MGMDLCYYGVKEEDIPKILDGNFEEDFSELEPSYTTRVFSAKDFYYLYTGGKELEEVDFQGKNERDIFTEALLGEVTVSFAPEDIYSYCSCKEKVKEITNFLNKIDIKDYFKKIGIIEEITGKNFKGEDFSYLGVKTRRKFYSSMKEEEYIFDIEATINEFNELKEFYNKLANENLALYIYIF
>NZ_CP013121.1|WP_060496645.1|2093824_2094514_+|DUF554-domain-containing-protein
MGLITNFLAIIIGGILGLTIGKKFNEDIKNIIVDCAGIFIMVIGIKSALVAQKDIMILIYLITGAVIGQLINIDKKIKDFSQFLEDKFVKEKNSLNNEKSFAKGFSTATILYCVGAMAILGSINSGLTNDNTILNIKAILDGVISIVLTSIYGIGVIFSAISVTIYQGIFYLFASQIKDYLSPQAISELNAVGGVLVLAIGINMTFKKDIKTANMLPAIFIPLLVSIFS
>NZ_CP013121.1|WP_005900906.1|2108313_2109327_+|toxin-antitoxin-system-YwqK-family-antitoxin
MKKLLVGLFLISSVIAFSNVQTFPYEKMVTHGTSNIVYIEGQEKPFTGIVEKKFPNGKIEAKMNFKDGKLHGKTITYYENGNMRSDENFIDGIAQGISKTFYENGQVEYETNYKNQKRDGLERSYSPTGQLQTEMIYKDGKLEGLSKIYGANGKLEGEAYFKDGQPEGITKEYYPNGILRSEGNYLLGAKHGISKMYYENGKLQSEAIFKNGVLDGVQKDYTVDGKLLRELPFKYNQVNGLAKFYNEQTGKLEYETVYVDNMREGLSKKYYPSGKLLSEVIFKKDKEEGILKAYYESGKPQGEIPYKNGLIHGTVKRYDENGKVIEQVTYKDGKEVK
>NZ_CP013121.1|WP_005895331.1|2109327_2110044_+|toxin-antitoxin-system-YwqK-family-antitoxin
MKKLLIGLFLVSSVLAFSERVVKGDKAYADDKGIVYVEGEKTPYTGVIEGYDAQGKLEGKANYKDGKMNGSSKLYYPSGKLQSEATFKDNVQDGVQKDYFEDGKVKLELPYKNGKPEGTAKEFYPNGKLFVEATYQNGIKNGYEKSYYDTGALQSEKTIKNGKIDGVSKIYYPNGKLGSEATFKNDVQIGVQKDYYENGKLKAEVPYKNGQVDGTAKAYDENGKVIEQVIFKNGQKVK
>NZ_CP013121.1|WP_005900905.1|2110060_2110558_+|toxin-antitoxin-system-YwqK-family-antitoxin
MKKILLALFLVSSVLAFSARVVKSTETVVKENIVYVGQEKAPYTGVVESYGDNGVLAGKAEFKDGKMNGASKIYYPSGKLQSEATFKDNVQVGVQKDYYENGKVKYELPYKNGQMDGVAKEYYPSGKIKIEEPYKNGQIDGVAKAYDESGKVIQQATFKNGEQVK
>NZ_CP013121.1|WP_005895327.1|2110596_2111028_-|flavodoxin-domain-containing-protein
MNKVNIVYYSFTGNTLRMVKAFEKGLQEANVPFKSYSVVELKDDNEAFDCEILALASPANQTEEIEKNYFQPFMKRNAEKFKDKKIYLFGTFGWGTGKFMGTWIKQVEELGAKIVELPMACKGSPNSETKEKLTNMAKKIATM
>NZ_CP013121.1|WP_005895326.1|2111409_2111958_+|hypothetical-protein
MIVKNILKKVFVFLVLSASFLTLNSKDTFANVVSEQNEIASKLVKNVKEVGNDRYYKGDFYSDVGTYPEGMFLVVEKLIENYIAFAHMGEASYLAPIGQRFEEKIEGQVIKRYIAVSQKKKQGYYCIDIYDDLNGQPKATLTARLNITKNKNGYFITPKDDLKIQYKGKTYKNQDALNFLGF
>NZ_CP013121.1|WP_060496657.1|2112006_2112825_-|hypothetical-protein
MKKILLILLSIFFLSCGVKNSNDNEHIFYLDNPSNEDVEIILDSQTYRLKARTFEVLKLKTGEHIAELSDKRKVYFKIFANSRGGIINPTTSSYVFNYFIPYSAPNIFVEWAEPEINTISIDNLSFTGTYKVVNDFIIDKNYIGWDFDIFEEINFDKISPEIEIKLFSKIFNPYEFLKQENLEYKDINKTKLNLEIKEDYSIPNFEDKKVKKYVEEIIELDKVYKVENDKNEQKKILEKYNTLVDKYIDEVGAPVYIKILYLDKGVIITKVE
>NZ_CP013121.1|WP_005895322.1|2112989_2113232_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGIIAWLVLGALSGWIANRLMDSRTGLIDNIIIGIIGAFIGGFVFNFLGAQTITGLNLHSIFVSVVGACILLWIINKIRR
>NZ_CP013121.1|WP_060496658.1|2113551_2118711_-|DUF4132-domain-containing-protein
MLNFYRKSLEKDVEKFVEKIKKDSKKLDKESQKFIENIFLEEKDELHYSYGVYLKSALKQELSSKKDVKFNDIFPKNIYPAIELLIGKKFLKVFLDISKNTIKYPFSRGYDRRMVRSSSYYNHINFLFELFEDLVDLNFLNLDIVTVVKGEYDNDGIYGLYNPYLIAYEIDNKNKELIDLIKGALGSQKSKIDLNYSIMQAIFISNNKELLELTGKLLLAAKLQEGVRQEICENMDRGLQENFEYMFKIIYDNNLIRFSSVKRALATWTGLTRDESDDISKFGKKELEIINKLIANPKYEDELLKSDDNVEVYLGLWNKSTRDIKYSVEAMEKLLKSSKYHIKLLISYYLDIIENKDYQREIAKKVIKEYGKDNKNIIEILACYLDFIIGYIYPSHFKDDIKSGKLNSKTYFKDKKEALEFFDILENAFSLMKEKSKVFDPCIFPWNIESIDTEKISTTLLFIAILYPDDILKNKVMGYIKEIDTLNRGRFLEVLFEKPSNKEQRDFIITMLSDRTSAGVTAYEIVKNNNLTKEYPREIEDLLRLKNADTRKNLIDLLMSQDKKELLISIDNLVSAKNENKRLAGLDILNLANSKQKPLYDKKEVKKLIEKISKPTGAEKILIENLSDKKKKESENTLSKLYNTEYKLDLPYEIKEVEKLSKTIKKNKKSEYIIENSLNIKKIFTKSTDELFKIVKKLSELYVKNENYEYMSFYSKEYILLRDGFSITKDVNNVPYNERQKLANYPLEDVWKGFYKKEIKDFSTLWQLNVLLTREYNGGINDSNIKECQDFYKKLLGFDITELRTKLKKANLKYIFTENYYNDTGYVLEIISMLYKKYCKENKDYLFEIGKVFTGYLLENFEAKDIVEQKERYNKEIYYNINIYYLNPGIYYLFARIIPYLEFYSNEKSFIESFILRYNLDEKIKKYTNENLKGCEIGGRRKGLELRDYTIAIVLNIAEKDLIYKDILEIENKTEDEKKEVFWSLDTYMNNYRNILAKKENKRLVNLNQFMLNEALKIIYNEGRKIVNYLVQNELKRGDSPTIYSKLLHEIDRIEGIDYLVQILQALGKETLDRTSYYWGGDDSKKAVLSHLLKVCYPTEKDNSKELAKKLKGTDITEQRLVEVAMYASQWLEIIESYLGWKGLVSGCYYFQAHMSDVDKNKEGLIAKYTPISIDDLRDGAFDIDWFKSAYKELGEKKFEMLYDSAKYISDGAKHSRARMFADAVNGKLNLKETEKKIEDKRNKDLVASYSLIPLLKDKQKDALHRYQFLQNFLKDSKKFGAQRRASEAKAVNISLENLSRNMGYSDVTRLIWNMETALINEMKEYFVPKKLDDVDVYIKIDDLGQSEIIYEKAGKELKSLPTKLKKDKYIEAIKEVHKNLKEQYRRSRKMLEEAMEDGIEFYGYEIENLMTNPVIAPILKSLVFKMGNDLGYYVDKKLKSAKKKSVTVKDDSLLKIAHCFDLFESGEWATYQKDIFDRELKQPFKQVFRELYVKTVDEKGRDKSLRYAGHQVQPAKTVALLKTRRWIIDGQEGLEKVYYKKNIIAKIFALADWFSPADIEAPTLEEVQFFDRKTFKPILIDDVPDLIFTEVMRDLDLVVSVAHIGDVDPEASHSTIEMRKAIIEFNCKLFKLKNVTFTENHALIKGERAEYSIHLGSGLIHQKAGSAINVLPVHSQHRGRVFLPFIDDDPKTAEIMAKVLLFAQDDKIKDVFILEQIK
>NZ_CP013121.1|WP_005900900.1|2119141_2119807_-|hypothetical-protein
MKRFSLKFMLIFILSLFSSFTYADGVFSKYYNGRFNYVINVPTTKYENGVGGTENLNFVKNSNLIPTKNFFSAYEGANSDGLTIQDINGNIIILAYGSYFLNSEEVNGLSRETIRNSFEYDRLNYNLFLRKYYNGNLPSNIDPLKYDYNKNLFIYGENVAYNTIGKNFYVVSYIEENKIVYKKVIYSKDSNAYIVFQASYLPKDKKFMDKLVVEMVNSIRY
>NZ_CP013121.1|WP_060496659.1|2120172_2120850_-|hypothetical-protein
MKKFSLKFILFVIISVFSSLAYADGVFSRYYNTSYDFSVAVPLEKYEQDTNEGSKINELEFIKKSNIIPSKDYFKGHGALAGDGIAIKNKNGDTSILVYGTYILHDFNAENLAEDKIKESFDAANLDYNKFIKKYYNGKLPKEIDELKFDYNKTLFRLGNSVAYSTFGKDFYVISYIKDNKVEYIKVINNNDTNYIIFETSYLPKDKKFMDPIVTEISKSINLIK

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Crispr_ID: NZ_CP013121_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_7

2144196-2144344

Orphan

Consensus_repeat	Method
ATTATGATGAAAAAGGT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP013121_7

>merge|NZ_CP013121|7|2144196-2144344|PILER-CR
ATTATGATGAAAAAGGTGTTATAATAAGTGAAGGAAAGATAATTAATGATAATATGGCAGGTGTTTGGAACCATTATGATGAAAAAGGAAGAAAGAATTATACCTATAATTTTGAAAAGGGAATAGTTATTATTTATGATGAAAAAGGT

>NZ_CP013121|7|4|2144196-2144344|PILER-CR
ATTATGATGAAAAAGGT	GTTATAATAAGTGAAGGAAAGATAATTAATGATAATATGGCAGGTGTTTGGAACC
ATTATGATGAAAAAGGA	AGAAAGAATTATACCTATAATTTTGAAAAGGGAATAGTTATTA
TTTATGATGAAAAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_032890517.1\|2139552_2140179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895261.1\|2142279_2142468_-\|DUF896-domain-containing-protein	unknown	unknown	gnl\|CDD\|226677
NZ_CP013121.1\|WP_005900871.1\|2145452_2145902_+\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|376496
NZ_CP013121.1\|WP_032890515.1\|2139080_2139491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_032890524.1\|2145904_2146666_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197321
NZ_CP013121.1\|WP_032890507.1\|2136622_2137189_-\|DUF4291-domain-containing-protein	unknown	unknown	gnl\|CDD\|379483
NZ_CP013121.1\|WP_032890509.1\|2137259_2137658_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496668.1\|2152178_2153387_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP013121.1\|WP_032890513.1\|2138209_2138974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
NZ_CP013121.1\|WP_080680121.1\|2137787_2138090_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496666.1\|2148491_2150213_+\|flavocytochrome-c	unknown	unknown	gnl\|CDD\|273816
NZ_CP013121.1\|WP_005900877.1\|2140884_2142270_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176
NZ_CP013121.1\|WP_060496667.1\|2150705_2151980_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
NZ_CP013121.1\|WP_005900878.1\|2140321_2140873_-\|ribonuclease-M5	unknown	unknown	gnl\|CDD\|224572
NZ_CP013121.1\|WP_032890519.1\|2142545_2143790_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP013121.1\|WP_005900873.1\|2144414_2144672_+\|chorismate-mutase	unknown	unknown	gnl\|CDD\|130864
NZ_CP013121.1\|WP_060496665.1\|2144668_2145472_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|223247
NZ_CP013121.1\|WP_032834282.1\|2147805_2148333_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005895366.1\|2150341_2150704_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP013121.1\|WP_023037534.1\|2146726_2147485_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319832

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_032890513.1\|2138209_2138974_-\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	0.000134385
NZ_CP013121.1\|WP_005895261.1\|2142279_2142468_-\|DUF896-domain-containing-protein	gnl\|CDD\|226677	COG4224, COG4224, Uncharacterized protein conserved in bacteria [Function unknown].	1.2863e-14
NZ_CP013121.1\|WP_005900871.1\|2145452_2145902_+\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|376496	pfam01220, DHquinase_II, Dehydroquinase class II.	2.84527e-82
NZ_CP013121.1\|WP_032890524.1\|2145904_2146666_+\|exodeoxyribonuclease-III	gnl\|CDD\|197321	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	5.14828e-168
NZ_CP013121.1\|WP_032890507.1\|2136622_2137189_-\|DUF4291-domain-containing-protein	gnl\|CDD\|379483	pfam14124, DUF4291, Domain of unknown function (DUF4291). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 190 and 214 amino acids in length. There are two conserved sequence motifs: VYQAY and RMTW.	2.94932e-101
NZ_CP013121.1\|WP_060496668.1\|2152178_2153387_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP013121.1\|WP_060496666.1\|2148491_2150213_+\|flavocytochrome-c	gnl\|CDD\|273816	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport].	1.09566e-174
NZ_CP013121.1\|WP_005900877.1\|2140884_2142270_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_CP013121.1\|WP_060496667.1\|2150705_2151980_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	1.35234e-149
NZ_CP013121.1\|WP_005900878.1\|2140321_2140873_-\|ribonuclease-M5	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.1389e-36
NZ_CP013121.1\|WP_032890519.1\|2142545_2143790_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	5.98039e-78
NZ_CP013121.1\|WP_005900873.1\|2144414_2144672_+\|chorismate-mutase	gnl\|CDD\|130864	TIGR01805, Shikimate_5-dehydrogenase, monofunctional chorismate mutase, gram positive-type, clade 2. This model represents a clade of chorismate mutase proteins/domains from gram positive species. The sequence from Enterococcus is fused to the C-terminus of an aparrent acetyltransferase, and the seuence from Clostridium acetobutylicum (but not perfringens) is fused to the N-terminus of shikimate-5-dehydrogenase, another enzyme of the chorismate pathway. All the other members of this clade are mono-functional. Members of this clade from Streptococcus and Lactococcus have been found which represent the sole chorismate mutase domain in their respective genomes which also exhibit evidence of the enzymes of both the upstream and downstream branches of the chorismate pathways. [Amino acid biosynthesis, Aromatic amino acid family].	8.73066e-19
NZ_CP013121.1\|WP_060496665.1\|2144668_2145472_+\|shikimate-dehydrogenase	gnl\|CDD\|223247	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism].	3.98482e-81
NZ_CP013121.1\|WP_005895366.1\|2150341_2150704_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	7.26004e-56
NZ_CP013121.1\|WP_023037534.1\|2146726_2147485_-\|HAD-family-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.41439e-121

>NZ_CP013121.1|WP_032890519.1|2142545_2143790_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MKKNLVIDDDIVENKTLYKKVNDIQKERENEQVNDLIVKRKSIIVSFFLILIILGCINFFSSISRFDNKIMLAKIIKQSMILLVSLLIFGVTIKFGSTIHKIITKPGFRLFVLGSSFVIFLIIAYGPESLFPTINGGKGWVHMGPISLQIPELFKVPFIMLLANILARGKDDNKKIPYKKNFFSVLFYTLIFFMLITFALHDMGTAIHYAMIASFIIFLSDIPNKVIFPAFFGLLFSIPGLLYLALHFSSGYKQHRVKAFIDGILHGNYTREDAYQIYQSLIAFGTGGILGKGLGNGVQKYNYIPEVETDFAIANFAEETGFVGMVIILFSFFSLFFLIMGVANNSKSYFSKYLVGGIAGYLITQVIINIGVAIGLIPVFGIPLPFISSGGSSLLAISIAMGLVIHVNNTQTLK
>NZ_CP013121.1|WP_005895261.1|2142279_2142468_-|DUF896-domain-containing-protein
MEMKDIIEKVNYYAKLSKERKLTEEEIKDREIYRRMYLDQFKAQVKEHLDNIEIVDDKDFKN
>NZ_CP013121.1|WP_005900877.1|2140884_2142270_-|asparagine--tRNA-ligase
MITVKDIFRHGENYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIASTIKVKGTLVKSEGSGQDLEVKAHNIEIFQKADLEYPLQNKRHTFEYLRTKAHLRPRTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNKVPKKENGEVDFSKDFFGKSTNLTVSGQLNVETYCAAFRNVYTFGPTFRAEYSNTARHASEFWMIEPEIAFGDLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKKPVFVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKELGLNEEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRTPNNAEF
>NZ_CP013121.1|WP_005900878.1|2140321_2140873_-|ribonuclease-M5
MKKKIKEVIVVEGKDDISAVKNAVDAEVFQVNGHAVRKNKSIELLKLAYENKGLIILTDPDYAGEEIRKYLCKHFPNAKNAYISRVSGTKDGDIGVENASPEDIITALEKARFSLDNSENIFNLDLMIDYNLIGKDNSADLRALLGAELGIGYSNGKQFMAKLNRYGISLEEFEKAYEKINMK
>NZ_CP013121.1|WP_032890517.1|2139552_2140179_-|hypothetical-protein
MLNDTFIFLDEFSDTELYIFLNRCKEKILKFIWKEKNIEIIGKYQEQLESCYSTEESFDLPEIGYDAVVYKVLSKVEEEYFEWLDFSDWNDCLSIEISIYNYPDEIRNLDNEIIWTKENIKREHIDIINEKNKKLEELKRKGREYFKYLDELEILRREKVNTPKREEELIKKIEEREEIGRQYAEYKRNLKKWIKFMKKYLTNNEYTY
>NZ_CP013121.1|WP_032890515.1|2139080_2139491_-|hypothetical-protein
MNKNYVGTYGVIKKNGGIDLICSVNYEGGGLFASILKCIDENDEYLKVITFGNCKEESEKIAIIKKEGYEILRKPKFNVGDKVRLIKYPDEIAIVKEIIWHEKNRRIFYILDVEGNKKRSNSWYYEDENKFEKINE
>NZ_CP013121.1|WP_032890513.1|2138209_2138974_-|hypothetical-protein
MSELHTVRKKIQGDFFLEKSYKNGKLFYEVLRYKDDYIGINYGYLEDKLSEETYINDNRIGMLISNEKEKIHICTLDGKRHEVGITVAYHNKSGRLAYEIDYLDDICMATNRIYKNDFIKNVPLIKSLEKRKKINEKYYKKYYEFKYKKNILRVEKIYCKKTGKRVDFKAYKNNKLYGFREVRDDNGNIILRGSYLNNKKVGIWYEYENNKVKIKVAFDENEKFSGIYREFFSNGNIKEEKYYFQGKEIEEEKI
>NZ_CP013121.1|WP_080680121.1|2137787_2138090_-|hypothetical-protein
MEVKVMNATEKKELMGKYAKKLENAIKREASVMKEIENDKTLIKYLEGQKTSGAAFDNTVYESYDVWIETIRKQIKKSESTLTNIEFKKVELEAIQKYIA
>NZ_CP013121.1|WP_032890509.1|2137259_2137658_-|hypothetical-protein
MLFSNFGKKNYFVEEDFIELRDSVKNLIDAIEKYKDMRKDSDGYIMELKEFLKEVNLVLEEKNLTKKELTNLHYLGESYFNSRIDNSIYSYYVYDKNDLEKTHQANDEIGIAKKRFGEILYKITEKVMYHMI
>NZ_CP013121.1|WP_032890507.1|2136622_2137189_-|DUF4291-domain-containing-protein
MKYEEQERKIYAKFDDETIRVYQAYNDKIADEAIKLGTFGEHFSLTRMTWIKPSFLWMMYRCGWAEKENQERVLAIDIKREAFDEIVKNSVISSYKSNLGITEDEWKEEVKNSLVRCQWDPERDIYGKPIGRRSIQLGIRGEAVVKYVNEWIVKITDITDEVKRIKQSIDNGTFKESFLPEEKEYIVK
>NZ_CP013121.1|WP_005900873.1|2144414_2144672_+|chorismate-mutase
MIELELMRKKIDEIDDKLLALFKERLEVSKKIGLLKKKYKMEIFDPQREQEIIDGCTQNISEDEKVYVEKFLRNLMDISKEVQSK
>NZ_CP013121.1|WP_060496665.1|2144668_2145472_+|shikimate-dehydrogenase
MRKFGLLGKKLSHSLSPLLHNTFFEDIGLKDEYKLYEVDETEIDNFKNYMLENSIEGVNITVPYKKTFLDKLNYISDEAKGIGAINLLYIKDNKFYGDNTDYYGFKYTLIKNDIDVKNKKIAIIGKGGASASVYKVLKDMEAEDITFYFRKNKLSKIEFPENIGGDIIINTTPVGMFPNIEDNLVSKEILKKFKIAIDLIYNPLETKFLKEAKENGLKTINGLDMLIEQALKTDEILYGILLSTQLKKKIRKKIKKKVEEFYENNGN
>NZ_CP013121.1|WP_005900871.1|2145452_2145902_+|type-II-3-dehydroquinate-dehydratase
MKIMVINGPNLNMLGIREKNIYGTFTYDDLCKYIEDYPEYKDKNIEFEFLQSNVEGEIVNFIQEAYNKKYDGIILNAGGYTHTSVAIHDAIKAVSIPTVEVHISNIHAREEFRTVCMTSSACIGQITGLGKFGYILAVVYLIEYYKERK
>NZ_CP013121.1|WP_032890524.1|2145904_2146666_+|exodeoxyribonuclease-III
MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLELKGYHQYWNYAEKKGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMVWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVYSWWSYRANARKNNAGWRIDYFVVSKGLEKNLVDAEIHSQTEGSDHCPVVLFLDLNK
>NZ_CP013121.1|WP_023037534.1|2146726_2147485_-|HAD-family-hydrolase
MKTYIIDLDGTMYSGSTNIDGAREFIDYLHSKNLPYIFLTNNATRTKKQAKEHMLNLGFKDIKEEDFYTSAMASAKFIAKNYPEKKCFMIGESGLEEALKEWNFDLVQENPDFVVVGLDRNATYKKYSEALHHILKGAKFIATNPDRLLANNGTFDIGNGAVIDMLEYASGVEAVKIGKPYQIILDILLDEKNLKKEDLIFIGDNLETDIKLGYDAKIETIMVCSGVHTEKDIERLKVYPTKVIKNLRELIK
>NZ_CP013121.1|WP_032834282.1|2147805_2148333_+|hypothetical-protein
MKKILFGTLVFSLILSSLAYAEADAEKMRERREQREKEQQQGIVENSSSVESSSQNVAGATTTNMSSEEEREAYAALERARARIEKEEQEKLKAQQEMAEAQSQMEAQAEVVTEQGANENPDQNQVIFVEPAAPRMTPEEEKEAYEALERVRARILKEDEERAELLKAATEQQVQ
>NZ_CP013121.1|WP_060496666.1|2148491_2150213_+|flavocytochrome-c
MRKKFFGKLFGLTLLIFTLLFTGASAEVYEGTGLGYDKDGIVLDVEITNNKIVDVKVKRAKESDFATPAIQEIAKKVIATQSLDVDGISGASLTSEGTKEAIEEAVKKSGVTLKAITAQNTKAVELPKEADVVVIGAGGAGLTSAIAAHEKGAKVILIEKTELLGGNTNYATAGLNAAGTKIQEKFGEKDSPELFYEDTMKGGKNKNNKELVRVLANNSSAIVDWLIARGADLSEITSTGGQSAKRTHRPTGGAAVGPNIVSALSKTAENEKIDIRKGTKAIALVKVKNRIVGVKVREIDGKEYTIKAKAVIVATGGFGANAKMVEKYNPKLKGFGSTNNPAIVGDGIIMVEKVGGALVDMNEIQTHPTVVHNKTNMITEAVRGEGAILINRDGKRFIDELETRDVVSKAILEQKGKSAFLVFDEGIRTKLKAADGYVKKGFAVEGTLEEIAAKIGTDAKTLEATLNKYNEAVRNKVDSEFNKKTLPKELTGDKYYVIEVSPAVHHTMGGVRINTNAEVLGKNGRPIKGLYAAGEVTGGIHGANRIGGNAVADITIFGKIAGENAATFSKSVK
>NZ_CP013121.1|WP_005895366.1|2150341_2150704_+|arsenate-reductase-family-protein
MKDIVFFCYPKCSTCQKAKKWLQENSVEFTERDIVKDNPTEAELKKFLKKSKKELKKFFNTSGILYREMELKDKLPTMTEEEMLKLLATDGKLVKRPMIVTKDVVLNGFKEEEWKELLKK
>NZ_CP013121.1|WP_060496667.1|2150705_2151980_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MYNMMDVITAGFALFAMLFGAGNLIFPPMLGYELGNSWGIASFAFILTGVGIPLMGIIASANAGKSLDSFSDKVSPLFAKFYGIALILSIGPLLALPRTGATAYEVTFYHAGFTTSIWKYIYLGIYFLLALLFSLKSSKVVDRVGKILTPILLIVLFIILVKGVFFNDLPIVEKIYELPFKKGFTEGYQTMDALAAIVFSTVILNAIRGKAELTPKQEFSYLLKVGLIAAAGLAIVYAGLSYIGASFGSLDLVAGAEKTDLLVKISINLLGKIGYLILAICVAGACLTTSIGLIVTVAEYFSSFMKISYEKLVVITTIIGFLFAIFGVNKIVIISVPILVFLYPISIALIILNFFHIKNANVFKGVVLTSGLIGLYEGISITGIIMPEIFNNIYNSLPLVNLGLPWLVPALIVGFCCYFIKDGK
>NZ_CP013121.1|WP_060496668.1|2152178_2153387_+|tyrosine--tRNA-ligase
MANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQHGHRPIALAGGGTGMVGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDGKAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRMENGLSFLEFNYMIMQAYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGALWLDPKKTTPYEFYQYWRNVDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKELLDVLVERKIIKTKSEGRRLIEQNGMSLNDEKITDVKFTLNDNTLGLLKLGKKKFYNIVKK

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Crispr_ID: NZ_CP013121_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013121_8

2481524-2481647

Orphan

Consensus_repeat	Method
CTTTCTAGTATTTTCTAGTAGCTTTCTAGTAAGAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013121_8

>merge|NZ_CP013121|8|2481524-2481647|CRISPRCasFinder
CTTTCTAGTATTTTCTAGTAGCTTTCTAGTAAGAGAAAAAAATGATTGAAATATAAAGTATTTTAAGAAATAAAAAGTAATTAGTAGCTTTCTAGTATTTTCTAGTAACTTTCTAGTAAGAGAA

>NZ_CP013121|8|5|2481524-2481647|CRISPRCasFinder
CTTTCTAGTATTTTCTAGTAGCTTTCTAGTAAGAGAA	AAAAATGATTGAAATATAAAGTATTTTAAGAAATAAAAAGTAATTAGTAG
CTTTCTAGTATTTTCTAGTAACTTTCTAGTAAGAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013121.1\|WP_005901135.1\|2470467_2471142_+\|DUF502-domain-containing-protein	unknown	unknown	gnl\|CDD\|225480
NZ_CP013121.1\|WP_005901131.1\|2476056_2477388_+\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP013121.1\|WP_060496812.1\|2493052_2493544_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496804.1\|2474697_2475819_+\|tRNA-guanosine(34)-transglycosylase-Tgt	unknown	unknown	gnl\|CDD\|234642
NZ_CP013121.1\|WP_060496805.1\|2480079_2481510_+\|putative-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225420
NZ_CP013121.1\|WP_060496802.1\|2471156_2471960_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP013121.1\|WP_005901114.1\|2493560_2494406_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NZ_CP013121.1\|WP_005901130.1\|2477412_2478000_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_060496806.1\|2481734_2483558_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341170
NZ_CP013121.1\|WP_060496807.1\|2483575_2486617_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_CP013121.1\|WP_060496811.1\|2491290_2493042_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|237053
NZ_CP013121.1\|WP_005901117.1\|2490897_2491278_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP013121.1\|WP_060496810.1\|2490385_2490901_+\|flavodoxin	unknown	unknown	gnl\|CDD\|180850
NZ_CP013121.1\|WP_005901120.1\|2489607_2490201_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP013121.1\|WP_005901128.1\|2478038_2478389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013121.1\|WP_005901127.1\|2478506_2480069_+\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|211578
NZ_CP013121.1\|WP_060496803.1\|2472505_2474683_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP013121.1\|WP_060496809.1\|2488283_2489606_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP013121.1\|WP_005898138.1\|2471974_2472487_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP013121.1\|WP_060496808.1\|2486658_2488161_-\|flotillin	unknown	unknown	gnl\|CDD\|259798

Protein	Function_ID	Function_description	E-value
NZ_CP013121.1\|WP_005901135.1\|2470467_2471142_+\|DUF502-domain-containing-protein	gnl\|CDD\|225480	COG2928, COG2928, Uncharacterized conserved protein [Function unknown].	7.57012e-77
NZ_CP013121.1\|WP_005901131.1\|2476056_2477388_+\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.10028e-173
NZ_CP013121.1\|WP_060496804.1\|2474697_2475819_+\|tRNA-guanosine(34)-transglycosylase-Tgt	gnl\|CDD\|234642	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional.	0
NZ_CP013121.1\|WP_060496805.1\|2480079_2481510_+\|putative-DNA-binding-domain-containing-protein	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	3.4651e-68
NZ_CP013121.1\|WP_060496802.1\|2471156_2471960_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.7653e-10
NZ_CP013121.1\|WP_005901114.1\|2493560_2494406_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	1.93706e-175
NZ_CP013121.1\|WP_060496806.1\|2481734_2483558_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341170	cd17281, RMtype1_S_HpyAXIII_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) TRD1-CR1, Neisseria meningitidis 510612 S subunit (S.Nme510612ORF1157P) TRD1-CR1 and Streptococcus mitis SVGS_061 S subunit (S2.Smi61ORF7905P) TRD1-CR1. Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) recognizes 5'... CTANNNNNNNNTGT ... 3', and the recognition sequences of Neisseria meningitidis 510612 S subunit (S.Nme510612ORF1157P) and Streptococcus mitis SVGS_061 S subunit (S2.Smi61ORF7905P) are undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) TRD1 recognizes CTA/TAG, and TRD2 recognizes ACA/TGT. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	6.31821e-113
NZ_CP013121.1\|WP_060496807.1\|2483575_2486617_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP013121.1\|WP_060496811.1\|2491290_2493042_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|237053	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP013121.1\|WP_005901117.1\|2490897_2491278_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.85652e-50
NZ_CP013121.1\|WP_060496810.1\|2490385_2490901_+\|flavodoxin	gnl\|CDD\|180850	PRK07116, PRK07116, flavodoxin; Provisional.	4.62485e-38
NZ_CP013121.1\|WP_005901120.1\|2489607_2490201_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	8.63974e-52
NZ_CP013121.1\|WP_005901127.1\|2478506_2480069_+\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	0
NZ_CP013121.1\|WP_060496803.1\|2472505_2474683_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP013121.1\|WP_060496809.1\|2488283_2489606_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	5.42923e-115
NZ_CP013121.1\|WP_005898138.1\|2471974_2472487_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	4.01431e-99
NZ_CP013121.1\|WP_060496808.1\|2486658_2488161_-\|flotillin	gnl\|CDD\|259798	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. The flotillin (reggie) like proteins are lipid raft-associated. Individual proteins of this SPFH family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. In addition, microdomains formed from flotillin proteins may be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and interact with a variety of proteins. They may play a role in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and in cancer invasion, and metastasis.	2.56738e-44

>NZ_CP013121.1|WP_060496805.1|2480079_2481510_+|putative-DNA-binding-domain-containing-protein
MNNRIKFLVSSSENQYLERKSARIEPLDILKHLVAFANADGGSLVIGVEDNREITGFNTYKAHKIEEFKNISLVKLKDTPLLAKYETFDVKNKNGEEDKILVISVEPVYDKVIKSYDNNVYLRQFDKTEKLNHEQITQLEYDRGQRYFEDEVVEDSSIEDIDLELVESYRKNMDLTNSTLEDILKSRNFIKKGFLTNACVLLFAKEPTKYLPQARLKFIRYDGVKANVGTEINIIKEKTFDKAIPKIIMEVKEFIKTQLREFQYLDGEEGNFKSMPEYPEFAWFEGIVNALTHRNYSIRGEYIRFIMFDDRIEIHSPGKLPNIVTIENILTQRYSRNPRIARILSEFGWVKEMNEGVKRIYSEMEKFFLRKPVYLEPGNNVLLVLENNILNRNVRIDDNLKKLIDKEIYKELNFIEKEIMKFSFMNKKITVADLSKNINKTTVTTRMYLKKLVTLGLLEWHGTNPKDPTQFYSLKK
>NZ_CP013121.1|WP_005901127.1|2478506_2480069_+|type-I-restriction-modification-system-subunit-M
MDNKKEQERAELHRTIWGIANALRGSVDGWDFKQYVLGILFYRYISENLTNYINRGEFEAGNIDFDYSLLNDEDAIVAKEDLIRTKGFFILPSELFINLRKKADKDENLNVTLDTIFKNIENSASGTESESDLKGLFDDIDVNSNKLGGTVAKRNENLVNLLNGVGDMKLGDYQENTIDAFGDAYEYLMGMYASNAGKSGGEYYTPQEVSELLTKLTLVGKTEVNKVYDPACGSGSLLLKFAKILGKENVRNGFYGQEINITTYNLCRINMFLHDIDFDKFDIAHGDTLTEPAHWDDEPFEAIVSNPPYSIKWEGDSSQILINDSRFSSAGVLAPKSKADLAFIMHSLSWLASNGTAAIVCFPGVMYRSGAEQKIRKYLIDNNYIDCIIQLPDNLFYGTSIATCIMVLKKSKIDNKVLFIDASKEFVKVTNSNKMIEKHINDIVEKFTKREDIEYISNLVEYEKIVEENYNLSVSTYVEKEDTSEKIDIVELNKEIQRIVTREEELRKEIDKIIAEIEIK
>NZ_CP013121.1|WP_005901128.1|2478038_2478389_+|hypothetical-protein
MKKGIFAMFILVASMAMVACTGANKSTTNEGAVGENDAFKALEKRREYYKAQDKEKAKLEAEAKKVEEKAMKEAATQVEATTEEVPVTVDDAQAAKAKEEADKEALKILEKKRKGN
>NZ_CP013121.1|WP_005901130.1|2477412_2478000_+|hypothetical-protein
MRKNLEILDKIYNLRYKSGKVHLFYSINKLVGRFGNVISLDKIYVSKEYLSYLSEKLFQDKNRIISFFGGNNKFVRLSLVQEFIQDFGRDIAQEIKDDFLELKQKNSSIFKATKERMLVLKENENEDMTNEDVILIQSYLSNWKNLQDKIRHFIPEEFYSQKINYFYTSLLSYVKFLEKLNPDYETGIKYLQAIN
>NZ_CP013121.1|WP_005901131.1|2476056_2477388_+|magnesium-transporter
MEEIIQLLEQNRLAELKEILIKENPIDVADVFEEFPKEKDLIIFKLLPKDFSSEVFSYLSPEKQQEVIENITDEEIKFIMEDMYLDDTVDFIEEMPANIVDKILKNTSHDKRKLINQMLKYPENSAGSVMTVEYISFKDNYTVKQAIDYYRKIAIDKEETDICFVTDSKKKLVGIISLKTLILSNDDSYIKDEMDTNFVSVLTKDDQEEIAALFRKYDLTTMPVVDHEDRLVGVITVDDIVDVIDQENTEDIQKMAAMNPSDEEYLKESVMSLAKHRILWLLVLMISATFTGMVIKKYEEVLQSAVYLAVFIPMLMDTGGNAGSQSATLVIRGIALEEIEFSDIFKVIWKEFRVSVLVGFILSAVNFVRIYYFTKSGLETSLVVAISMFLTVIMAKVIGGVLPLIAKSLKIDPAIMASPLITTIVDTAALIIYFQLSVIFLHI
>NZ_CP013121.1|WP_060496804.1|2474697_2475819_+|tRNA-guanosine(34)-transglycosylase-Tgt
MKLPVTYKIEDKDGKARAGVITTPHGEIETPVFMPVGTQATVKTMSKEELLDIGSEIILGNTYHLYLRPNDELIVRLGGLHKFMNWDKPILTDSGGFQVFSLGSLRKIKEEGVYFSSHIDGSKHFISPEKSIQIQNNLGSDIAMLFDECPPGLSTREYIIPSIERTTRWAKRCVEAHQKKDIQGLFAIVQGGIYEDLRQKSLDELSEMDENFSGYAIGGLAVGEPREDMYRILDYIVEKCPEEKPRYLMGVGEPVDMLNAVESGIDMMDCVQPTRLARHGTVFTKDGRLVIKSERYKEDTKPLDEECDCYVCKNYSRAYIRHLIKVQEVLGLRLTSYHNLYFLIKLMKDAREAIKEKRFKEFKENFIKRYEEK
>NZ_CP013121.1|WP_060496803.1|2472505_2474683_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MNNYWEQLLDKARANHLNLDFDKIKLALGFAEESHQGQYRKSGDDYIIHPVEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVTKLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIYAPLAHRLGMAKIKSELEDMAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIRTLSDLGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKATCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTIVGPLGKFIEIQIRTKDMDDIAEEGIAAHWNYKENKKSSKDDNIYGWLRHIIEFQNESDSTEDFIEGVTGDIDRGTVFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVGAKVNGRMVTIDHKLKSGDKVEIITSKNSKGPSIDWLDIVVTHGAKGKIRKFLKDENKETVTKIGRDNLEKEASKLGMTLKEIENDPTLKKHMEKNNIPSLDEFYFYIGEKRSRLDILITKIKTSLEKERAASTLTIEEVLKKKEEKKKEGKNDFGIVIDGINNTLIRFAKCCTPLPGDEIGGFVTKLTGITVHRKDCANFHAMVEKDPSREIMVKWDENLIETKMNKYNFTFTVVLNDRPNILMEIVNLIANHKINITSVNSYEVKKDGDRVVKVKISIEIKGKTEYDYLINNILKLKDVISVER
>NZ_CP013121.1|WP_005898138.1|2471974_2472487_+|adenine-phosphoribosyltransferase
MDLKKYVASIENYPKEGIIFRDITPLMNDGEAYKYATEKIVEFAKDHHIDIVVGPEARGFIFGCPVSYALGVGFVPVRKPGKLPREVIEYAYDLEYGSNKLCLHKDSIKPGQKVLVVDDLLATGGTVEATIKLVEELGGVVAGLAFLIELVDLKGREKLNKYPMITLMQY
>NZ_CP013121.1|WP_060496802.1|2471156_2471960_+|tetratricopeptide-repeat-protein
MTMNKKIVIVLGLSILISGCLSANKEKNYNFIKGLNEYQKNDKVSALENYKKAYEMDKNNVVLLNEIAYLYVDLGNYEEAENYYKKALEVKPNDENSLKNLLQLLYLQNKIVEMKKYIPMIIDKNSFVYNLNNFRLGILSNGEGEDIVEKSLLKISSNDRFLEEYNESFYTDLASVAGLSDNTIKYSSIIFEKAYKKYSNKNKDIVKIYADFLIETKEYRKAEDILMKYIVNNEDNLDEYALLKKLYTKENNKQKLENLKKILRNKI
>NZ_CP013121.1|WP_005901135.1|2470467_2471142_+|DUF502-domain-containing-protein
MRLKKNFYTGLLMILPVVITYYIFNWLFNLAFRIINNTAIIKVLKKLVYFSFGEKADAFYIQILVYIVAALIIFLSITVLGYMTKLVFFSKFIKKASDVLERIPIIKTVYSTSKQIIGVVYSGDGESVYKKVVAVEFPRKGIYAIGFITADKNTALKEFLADKEIVNVFVPTAPNPTSGFLLCMPKEDIHPLNMSVEWAFKLIVSGGYITEELVKEKEEDKITE
>NZ_CP013121.1|WP_060496806.1|2481734_2483558_+|restriction-endonuclease-subunit-S
MSKLDELIKELCPNGVEYKELGEIVKSQRGKTITKELIKDGDIPVISGGQKPAYYHNESNRKGEVITVAGSGAYAGFVMYWDKPIFVSDAFSIECDKSYLNIKYIYYFLQNNQMKIYSLKKGGGVPHVYFKDMQKFLVPVPPLEVQDEIVRILDNFTALTAELTAELTARKKQYSWYRDYLLKFENKVEIIKLGNVSELKSGGTPKTENLEYWENGIIPWMSSGEVNKGNIYETEKKITKEGYENSNTKMLPKNTVVIALAGQGKTRGTVAITRIELCTNQSLCGIIPNEKLNSDYLYHYLKTQYENLRQLSSGDGTRGGLNLKMIDNYLIPLPPLEVQKRIVEVLDNFEKICNDLNIGLPAEIEARQKQYEFYRNFLLTFKIENCTLPKTRQDKTRQDIIKLFMYIFGYIELELGEIFELKNGYTPSKSNPEYWLNGNINWFKIEDINTNGRILKNSIEKVNKKGIKGKLFPENTLIISTSATIGEYALITKEFLCNQRFTCLIVKGEYKNILLPMFLKHYAYILSKKCKENIKIGNFPSVDMDKFKKFLIPLPLLEEQQRIVNILDRFDKLCNDISEGLPAEIEARQKQYEYYREKLLTFKNIND
>NZ_CP013121.1|WP_060496807.1|2483575_2486617_+|type-I-restriction-endonuclease-subunit-R
MSSVDYNMLISTLESTVVTEYVKEDVPVYTYQSEADLEREFIKNLQNQGYEYLNIHNEEELIINLKNKLEKLNNIIFSEKEWERFFKEKIANKNESIIEKTRTIQEDYIKSFTRDNGTLINICLIDKKNIHNNFLQVINQYEEENGNHNTRYDVSILVNGLPLIHIELKRRGVAIREAFNQINRYQRDSFWAGSGLFEYVQIFVISNGTNTKYYSNTTRARHIKEMSYNRRKVKKSSNSFEFTSYWADANNKAITDLVDFTKTFFAKHTILNILTKYCIFDTSDTLLVMRPYQISATERILSKIQLANNYKWVGKIDAGGYIWHTTGSGKTLTSFKTAQLASQLDYIDKVLFVVDRKDLDSQTQKEYDRFSKGSANGNTSTKILKAQLEDRYENKSKIIITTIQKLGHFIKQNKNHKVFKKNIVLIFDECHRSQFGELHLAITKTFKNYFMFGFTGTPIFPKNSNGSSKTLFKTTEQTFGDKLHTYTIVNAINDGNVLPFRIDYINTIKEKENIQDKKVNAIDIEKAMSDPIRIREVVSYIIEHFEQKTMRNKHYELKDQRLSGFNSIFAVSSIPVAKKYYLEFKKQLEEKNKTLTIATIFSYSANEEENTDNLDDESFDTENLDLSSREFLEEAISDYNKKFGTNFDTSSDGFQLYYEDLSKRTKNKEIDILIVVNMFLTGFDATTLNTLWVDKNLRMHGLIQAFSRTNRILNSIKTFGNIICFRDLQKETDEAIALFGNKEAGGIVLLKTYEEYYNGYEDDKGREKEGYSELIEELQNKFPIDEQIIGEQNKKEFIVLFGNILKIKNILSAFDKFAGNEILSEREYQDYQSIYIDLYEEIKKTRNTDKESINDDIIFEIELIKQVEINIDYILMKVAEYYKSNKKDKEILIDIKKAIDSSIELRSKKELIEGFIDRVNSSKNVTDDFKKFVREEKEKDLEKVIEEEKLKPEETKKFIDNSLRDGTLKTTGTDIDKLLPPVSRFGGGNRVEKKLGVIGKLKGFFDKYLGLTI
>NZ_CP013121.1|WP_060496808.1|2486658_2488161_-|flotillin
MFSSNLFVMGLIAIGVIFIVCFFSYVRVPVNKIAFISGIGKNRVAKGKLVIYLRFFERVDYLDLSVFSVDVNTAVAVPTNDFINIKVDAVVNLQVDETAGILEIAAKNFLNRKSSDIAISVKDVLEGNLREIVGQMQLKEIVQNRKNFNEKVQENVAPDLREMGLKVISFNVQNFQEDKQVIENLGAENISKISKEASIARAEADKEIEIAKANANKEAMDIKLKTEQDIAEKENALAIKKAELKVKADTEKAKADVTYELEKERKRKEIEEVTGLSNLVREQKAIETNKAKYEAEIIVPKQADAEARKVEKTKEAEAKKIEEQQAAEAKLYKEQREAEAIKLRALAEAEAIREKALAEAEATRQKGLAEAESKKALLLAEAEGVREKGLAEAEALDKKAEAMAKYGDAAKLEMYYNALPLVAKNLAEPLSKIGNITMYGEGNTTKFMSEMTQNLDKVLKAATDGLGIDAKALLTSYLGGKIAQNKNQNPKDEVIETEEK
>NZ_CP013121.1|WP_060496809.1|2488283_2489606_+|MATE-family-efflux-transporter
MFKKTIFKTIFKYAIPNVISMWIFTLYTMIDGVFISRFVGSTALAGVNLALPLINFIFSISIMIGVGSSTLIAIKFGENKYDEGNRIFTLATFLNLFLGIFISAMILFNIDRVINILGANKSQEVYKYVKEYLTIIVFFSVFYMSGYAFEIYIKIDGKPSYPAICVLVGGFTNLILDYVFVVIFHYGVTGAAIATGISQVISCTMLFLYIVLKAKYIKFKKLIKISFDKIAKIFKTGFSEFLTEISSGILILIYNLVILKKIGVLGVSIFGTVSYITSFITMTMIGFSQGIQPVISYNLGKKNHKNLKDILKISIIFLGILGIFCFFFISLFSEYIGKIFFREQDIILYVKIVLRIYSLSYVVVGINIFISAYFTAIKKVIYSALITFPRGILFNSILLLILPNIFGNKVIWMVSFLSEVLTIFICIYLLKKIKREGILS
>NZ_CP013121.1|WP_005901120.1|2489607_2490201_+|flavin-reductase-family-protein
MKKRNLKGSVVLNPVPVVLVTCKNLEGKDNVFTVAWVGTVCSKPPMLSISIRPERLSYDYIKETMEFTINLPTKKQTKEVDFCGVRSGRQLDKIKESGFTLQEGEKVKSSYIKECPVNIECKVKDIIKLGSHDMFIAEVLCSHIDEDLFDEKDKIHFEKANLISYSHGEYFSLSKEAIGKFGYSVMKKKKKTKISKK
>NZ_CP013121.1|WP_060496810.1|2490385_2490901_+|flavodoxin
MSKKLVVYFSHKGENYSKGKIVNLEKGNTEIVAEIISTITSADIFEIEADEKYPIKYDDCIEIAKKELRENSRPKLKDDIDIKEYDTIFMGYPNWWGTMPMPVWTFLEEKDFTNKRILPFCTHEGSGLGKSESDIKKLTSGAEVLKGLAINGSEVNNSEKQIKKWLEDSLK
>NZ_CP013121.1|WP_005901117.1|2490897_2491278_+|MerR-family-transcriptional-regulator
MTIKEVSEQLEITQDTLRYYEKVGMIPPVTRTEGGIRDYQKEDLEWVKLATCMRSAGLPVKVMIDYLSLYKQGNSTIQARCNLLKEQREKLLEQKKQIEETLEKLNYKIARYEVAVETGKLTWDKE
>NZ_CP013121.1|WP_060496811.1|2491290_2493042_+|1-deoxy-D-xylulose-5-phosphate-synthase
MYLEKINSPEDIKKLNIEEMKILAQEIREAIIKRDAIHGGHFGPNLGMVEATIALHYVFNSPEDKFVFDVSHQTYPHKILTGRRQAFTDEAHYDDVTGYSNQHESEHDHFILGHTSTSISLALGLAKARDVKGEKGNVIAIIGDGSLSGGEALEGLDFAAELNSNLIIIVNDNDMSIAENHGGLYKNLKLLRETDGKAEINLFKAMGLEYIFVKDGNNLVELIEAFKKVKDIDYPIVVHIHTQKGKGYKLAEENKEPWHYVMPFNIEDGKPLNLDDSEDYTDVTKEYLIKKMKEDKTVVTITSGTPGAVGFYKKDRDEVGSQFIDVGIAEETAVAIASGMASKGAKPIYTVVSTFLQRTYDQLSQDLCINNNPATIVVYYAGAIGMTDVTHLGWFDIAMMGNIPNLVYLAPTTKEEHLAMLEWSIEQQEHPVAIRIPGGKMVSAGKKITKDFSKLNTYEVSQRGKKVAIIGLGTFYQLGEKVATLYEEKTGIQVTVINPMYITGVDEKLLEELKKDHSVVITLEDGILNGGFGEKIARFYGNSDMKVLNYGLKKEFLDRYDIGKLLRKNRLKADLIVEDLLKF
>NZ_CP013121.1|WP_060496812.1|2493052_2493544_+|hypothetical-protein
MKKGILIFILAVSASVFGKENLNNVKIVTSSNVVTSNFSTTDSSFEKDRKDIMDLYEKFLKNENNKEELAKITTKDFSLNKVNKTSPKKNEEILKKIEKIDTYSNLEESSSFNIENDKATLTVKKASTSKKEKVNNIEGKELKLEFKKVNNKWLIDKAEETIF
>NZ_CP013121.1|WP_005901114.1|2493560_2494406_+|aldo/keto-reductase
MKNVKLSNGVEMPILGFGVYQIPDLKECERVVSEAIEVGYRSIDTAQVYGNEEAVGNAIKKSGIDRKEFFITTKVWISNSGYEKAKTSIDESLKKLQTDYIDLLLIHQPFGDYYGTYRAMEEYYKAGKLRAIGVSNFFPDRFVDFVHFVEIKPMVNQVETHVFNQQIISQKIMKEYGTQIESWGPFAEGKNNLFTNETLVEVGKKYNKTAAQVALRYLIQRDVVIIPKTVRKERMIQNFDVFNFELSEEDMKEILKLDKKESLFLSHYDPETVKLLVNHKI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	289409-289451	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290168-290210	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290247-290289	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290402-290444	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290481-290523	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290560-290602	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290639-290681	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290794-290836	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290873-290915	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	290952-290994	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291031-291073	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291186-291228	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291265-291307	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291344-291386	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291423-291465	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291578-291620	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291657-291699	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291736-291778	1.0
NZ_CP013121_1	1.1\|289564\|43\|NZ_CP013121\|PILER-CR	289564-289606	43	NZ_CP013121.1	291815-291857	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	289409-289451	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290168-290210	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290247-290289	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290402-290444	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290481-290523	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290560-290602	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290639-290681	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290794-290836	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290873-290915	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	290952-290994	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291031-291073	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291186-291228	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291265-291307	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291344-291386	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291423-291465	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291578-291620	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291657-291699	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291736-291778	1.0
NZ_CP013121_1	1.2\|289643\|43\|NZ_CP013121\|PILER-CR	289643-289685	43	NZ_CP013121.1	291815-291857	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	289409-289451	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290168-290210	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290247-290289	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290402-290444	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290481-290523	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290560-290602	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290639-290681	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290794-290836	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290873-290915	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	290952-290994	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291031-291073	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291186-291228	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291265-291307	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291344-291386	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291423-291465	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291578-291620	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291657-291699	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291736-291778	1.0
NZ_CP013121_1	1.3\|289722\|43\|NZ_CP013121\|PILER-CR	289722-289764	43	NZ_CP013121.1	291815-291857	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	289409-289451	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290168-290210	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290247-290289	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290402-290444	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290481-290523	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290560-290602	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290639-290681	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290794-290836	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290873-290915	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	290952-290994	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291031-291073	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291186-291228	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291265-291307	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291344-291386	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291423-291465	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291578-291620	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291657-291699	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291736-291778	1.0
NZ_CP013121_1	1.8\|290089\|43\|NZ_CP013121\|PILER-CR	290089-290131	43	NZ_CP013121.1	291815-291857	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	289395-289451	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290154-290210	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290233-290289	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290388-290444	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290467-290523	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290546-290602	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290625-290681	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290780-290836	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290859-290915	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	290938-290994	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291017-291073	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291172-291228	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291251-291307	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291330-291386	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291409-291465	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291564-291620	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291643-291699	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291722-291778	1.0
NZ_CP013121_2	2.1\|291956\|57\|NZ_CP013121\|PILER-CR	291956-292012	57	NZ_CP013121.1	291801-291857	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	289395-289451	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290154-290210	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290233-290289	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290388-290444	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290467-290523	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290546-290602	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290625-290681	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290780-290836	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290859-290915	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	290938-290994	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291017-291073	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291172-291228	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291251-291307	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291330-291386	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291409-291465	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291564-291620	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291643-291699	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291722-291778	1.0
NZ_CP013121_2	2.2\|292035\|57\|NZ_CP013121\|PILER-CR	292035-292091	57	NZ_CP013121.1	291801-291857	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	289395-289451	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290154-290210	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290233-290289	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290388-290444	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290467-290523	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290546-290602	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290625-290681	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290780-290836	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290859-290915	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	290938-290994	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291017-291073	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291172-291228	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291251-291307	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291330-291386	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291409-291465	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291564-291620	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291643-291699	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291722-291778	1.0
NZ_CP013121_2	2.3\|292114\|57\|NZ_CP013121\|PILER-CR	292114-292170	57	NZ_CP013121.1	291801-291857	1.0

1. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 289409-289451, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

2. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290168-290210, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

3. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290247-290289, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

4. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290402-290444, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

5. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290481-290523, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

6. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290560-290602, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

7. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290639-290681, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

8. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290794-290836, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

9. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290873-290915, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

10. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 290952-290994, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

11. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291031-291073, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

12. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291186-291228, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

13. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291265-291307, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

14. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291344-291386, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

15. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291423-291465, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

16. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291578-291620, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

17. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291657-291699, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

18. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291736-291778, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

19. spacer 1.1|289564|43|NZ_CP013121|PILER-CR matches to position: 291815-291857, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

20. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 289409-289451, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

21. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290168-290210, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

22. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290247-290289, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

23. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290402-290444, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

24. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290481-290523, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

25. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290560-290602, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

26. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290639-290681, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

27. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290794-290836, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

28. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290873-290915, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

29. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 290952-290994, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

30. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291031-291073, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

31. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291186-291228, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

32. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291265-291307, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

33. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291344-291386, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

34. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291423-291465, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

35. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291578-291620, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

36. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291657-291699, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

37. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291736-291778, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

38. spacer 1.2|289643|43|NZ_CP013121|PILER-CR matches to position: 291815-291857, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

39. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 289409-289451, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

40. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290168-290210, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

41. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290247-290289, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

42. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290402-290444, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

43. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290481-290523, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

44. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290560-290602, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

45. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290639-290681, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

46. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290794-290836, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

47. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290873-290915, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

48. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 290952-290994, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

49. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291031-291073, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

50. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291186-291228, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

51. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291265-291307, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

52. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291344-291386, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

53. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291423-291465, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

54. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291578-291620, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

55. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291657-291699, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

56. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291736-291778, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

57. spacer 1.3|289722|43|NZ_CP013121|PILER-CR matches to position: 291815-291857, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

58. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 289409-289451, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

59. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290168-290210, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

60. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290247-290289, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

61. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290402-290444, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

62. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290481-290523, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

63. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290560-290602, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

64. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290639-290681, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

65. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290794-290836, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

66. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290873-290915, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

67. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 290952-290994, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

68. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291031-291073, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

69. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291186-291228, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

70. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291265-291307, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

71. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291344-291386, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

72. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291423-291465, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

73. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291578-291620, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

74. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291657-291699, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

75. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291736-291778, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

76. spacer 1.8|290089|43|NZ_CP013121|PILER-CR matches to position: 291815-291857, mismatch: 0, identity: 1.0

aaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
aaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*******************************************

77. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 289395-289451, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

78. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290154-290210, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

79. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290233-290289, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

80. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290388-290444, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

81. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290467-290523, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

82. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290546-290602, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

83. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290625-290681, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

84. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290780-290836, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

85. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290859-290915, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

86. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 290938-290994, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

87. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291017-291073, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

88. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291172-291228, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

89. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291251-291307, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

90. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291330-291386, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

91. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291409-291465, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

92. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291564-291620, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

93. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291643-291699, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

94. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291722-291778, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

95. spacer 2.1|291956|57|NZ_CP013121|PILER-CR matches to position: 291801-291857, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

96. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 289395-289451, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

97. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290154-290210, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

98. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290233-290289, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

99. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290388-290444, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

100. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290467-290523, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

101. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290546-290602, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

102. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290625-290681, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

103. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290780-290836, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

104. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290859-290915, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

105. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 290938-290994, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

106. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291017-291073, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

107. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291172-291228, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

108. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291251-291307, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

109. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291330-291386, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

110. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291409-291465, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

111. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291564-291620, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

112. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291643-291699, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

113. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291722-291778, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

114. spacer 2.2|292035|57|NZ_CP013121|PILER-CR matches to position: 291801-291857, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

115. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 289395-289451, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

116. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290154-290210, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

117. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290233-290289, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

118. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290388-290444, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

119. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290467-290523, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

120. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290546-290602, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

121. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290625-290681, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

122. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290780-290836, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

123. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290859-290915, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

124. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 290938-290994, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

125. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291017-291073, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

126. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291172-291228, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

127. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291251-291307, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

128. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291330-291386, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

129. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291409-291465, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

130. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291564-291620, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

131. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291643-291699, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

132. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291722-291778, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

133. spacer 2.3|292114|57|NZ_CP013121|PILER-CR matches to position: 291801-291857, mismatch: 0, identity: 1.0

gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	CRISPR spacer
gaggagacggaaacaaactttatcctgatgctttttagaaaaatcaattttattttc	Protospacer
*********************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013121_3	3.3\|1067960\|38\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1067960-1067997	38	KR131710	Fusobacterium phage Funu1, complete genome	33738-33775	1	0.974
NZ_CP013121_3	3.31\|1069824\|35\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1069824-1069858	35	KR131711	Fusobacterium phage Funu2 supercont1.1, partial genome	22366-22400	2	0.943
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	MN694472	Marine virus AFVG_250M516, complete genome	30146-30172	5	0.815
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	KY794641	Staphylococcus phage vB_Sau_CG, complete genome	93647-93673	6	0.778
NZ_CP013121_3	3.18\|1068954\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1068954-1068990	37	NC_007386	Spiroplasma citri plasmid pSciA strain GII3	7309-7345	6	0.838
NZ_CP013121_3	3.19\|1069021\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1069021-1069057	37	MT939241	Enterococcus phage 9183, complete genome	25374-25410	6	0.838
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794150	Bacteriophage APSE-3 strain HaPetestudinaceus-2671 genome assembly, chromosome: 1	27869-27895	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	EU794051	Bacteriophage APSE-4 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5) gene, complete cds; P7 pseudogene, complete sequence; conserved hypothetical protein (P8), putative Shiga-like toxin alpha subunit (P9), conserved hypothetical protein (P10), lambda-like group I holin (P11), lysozyme (P13), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds	8583-8609	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794146	Bacteriophage APSE-7 strain HaCipinimaritimae-2836 genome assembly, chromosome: 1	21700-21726	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794149	Bacteriophage APSE-7 strain HaCicuneomaculata-2628 genome assembly, chromosome: 1	22603-22629	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794148	Hamiltonella phage APSE-8 strain HaCiwatanabei-3293 genome assembly, chromosome: 1	20002-20028	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794152	Bacteriophage APSE-2 strain HaErgrossulariae-3692 genome assembly, chromosome: 1	24950-24976	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	NC_000935	Acyrthosiphon pisum bacteriophage APSE-1, complete genome	9948-9974	7	0.741
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR794151	Bacteriophage APSE-7 strain HaDrplatanoidis-3702 genome assembly, chromosome: 1	23249-23275	8	0.704
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	NC_011551	Bacteriophage APSE-2, complete genome	12008-12034	8	0.704
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	EU794053	Bacteriophage APSE-3 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5), conserved hypothetical protein (Y), putative YD-repeat toxin (Z), phage 21-like group II holin (E), lysozyme (F), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds	12058-12084	8	0.704
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	LR797923	Bacteriophage APSE-7 strain HaCinara_sp-3046 genome assembly, chromosome: 1	23855-23881	8	0.704
NZ_CP013121_1	1.4\|289801\|27\|NZ_CP013121\|PILER-CR	289801-289827	27	EU794050	Bacteriophage APSE-5 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5), putative Shiga-like toxin beta subunit (P7), conserved hypothetical protein (P8), putative Shiga-like toxin alpha subunit (P9), conserved hypothetical protein (P10), lambda-like group I holin (P11), lysozyme (P13), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds	8595-8621	8	0.704
NZ_CP013121_3	3.2\|1067893\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1067893-1067929	37	MN693145	Marine virus AFVG_25M56, complete genome	37297-37333	8	0.784
NZ_CP013121_3	3.2\|1067893\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1067893-1067929	37	MF360958	Salicola phage SCTP-2, complete genome	111006-111042	8	0.784
NZ_CP013121_3	3.18\|1068954\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1068954-1068990	37	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	137815-137851	9	0.757
NZ_CP013121_3	3.19\|1069021\|37\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1069021-1069057	37	LR214966	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12	33731-33767	9	0.757
NZ_CP013121_3	3.26\|1069491\|35\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1069491-1069525	35	NC_019764	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence	7953-7987	9	0.743
NZ_CP013121_3	3.9\|1068360\|36\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1068360-1068395	36	KX961630	Bacillus phage QCM8, complete genome	9001-9036	10	0.722
NZ_CP013121_3	3.17\|1068888\|36\|NZ_CP013121\|CRISPRCasFinder,CRT,PILER-CR	1068888-1068923	36	NC_029073	Geobacillus virus E3, complete genome	29330-29365	10	0.722

1. spacer 3.3|1067960|38|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 1, identity: 0.974

tcgccatttttcattaaaggaattattttaactacacc	CRISPR spacer
tcaccatttttcattaaaggaattattttaactacacc	Protospacer
**.***********************************

2. spacer 3.31|1069824|35|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to KR131711 (Fusobacterium phage Funu2 supercont1.1, partial genome) position: , mismatch: 2, identity: 0.943

ttaaaaaagataagtaatttatccccctctcccag	CRISPR spacer
ctaagaaagataagtaatttatccccctctcccag	Protospacer
.***.******************************

3. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to MN694472 (Marine virus AFVG_250M516, complete genome) position: , mismatch: 5, identity: 0.815

aaactttatcctgatgaaatctatcag	CRISPR spacer
agactttatactgatgaaatatatcca	Protospacer
*.******* ********** **** .

4. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to KY794641 (Staphylococcus phage vB_Sau_CG, complete genome) position: , mismatch: 6, identity: 0.778

aaactttatcctgatgaaatctatcag	CRISPR spacer
tttatgtatcctgatgaaatctatcat	Protospacer
    * ********************

5. spacer 3.18|1068954|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to NC_007386 (Spiroplasma citri plasmid pSciA strain GII3) position: , mismatch: 6, identity: 0.838

ttaaaaatttttttatactttttttcattgatattat	CRISPR spacer
ttaaaaatttttttatatcttttttcatttgtttttt	Protospacer
*****************..********** .* ** *

6. spacer 3.19|1069021|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to MT939241 (Enterococcus phage 9183, complete genome) position: , mismatch: 6, identity: 0.838

tttaacttc--catttctttttatttattagttttatat	CRISPR spacer
--taatttcctcttttctttttatttattacttatatat	Protospacer
  ***.***  * ***************** ** *****

7. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794150 (Bacteriophage APSE-3 strain HaPetestudinaceus-2671 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

8. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to EU794051 (Bacteriophage APSE-4 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5) gene, complete cds; P7 pseudogene, complete sequence; conserved hypothetical protein (P8), putative Shiga-like toxin alpha subunit (P9), conserved hypothetical protein (P10), lambda-like group I holin (P11), lysozyme (P13), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

9. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794146 (Bacteriophage APSE-7 strain HaCipinimaritimae-2836 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

10. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794149 (Bacteriophage APSE-7 strain HaCicuneomaculata-2628 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

11. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794148 (Hamiltonella phage APSE-8 strain HaCiwatanabei-3293 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

12. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794152 (Bacteriophage APSE-2 strain HaErgrossulariae-3692 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

13. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to NC_000935 (Acyrthosiphon pisum bacteriophage APSE-1, complete genome) position: , mismatch: 7, identity: 0.741

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgtg	Protospacer
     *******************  *

14. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR794151 (Bacteriophage APSE-7 strain HaDrplatanoidis-3702 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.704

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgta	Protospacer
     *******************  .

15. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to NC_011551 (Bacteriophage APSE-2, complete genome) position: , mismatch: 8, identity: 0.704

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgta	Protospacer
     *******************  .

16. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to EU794053 (Bacteriophage APSE-3 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5), conserved hypothetical protein (Y), putative YD-repeat toxin (Z), phage 21-like group II holin (E), lysozyme (F), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds) position: , mismatch: 8, identity: 0.704

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgta	Protospacer
     *******************  .

17. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to LR797923 (Bacteriophage APSE-7 strain HaCinara_sp-3046 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.704

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgta	Protospacer
     *******************  .

18. spacer 1.4|289801|27|NZ_CP013121|PILER-CR matches to EU794050 (Bacteriophage APSE-5 predicted P-loop ATPase (P3) gene, partial cds; P4 pseudogene, complete sequence; Q protein (P5), putative Shiga-like toxin beta subunit (P7), conserved hypothetical protein (P8), putative Shiga-like toxin alpha subunit (P9), conserved hypothetical protein (P10), lambda-like group I holin (P11), lysozyme (P13), conserved hypothetical protein (P14), conserved hypothetical protein (P16), conserved hypothetical protein (P17), terminase (P18), portal protein (P19), and scaffold protein gp8 (P23) genes, complete cds; and head protein (P24) gene, partial cds) position: , mismatch: 8, identity: 0.704

aaactttatcctgatgaaatctatcag	CRISPR spacer
cctgattatcctgatgaaatctatgta	Protospacer
     *******************  .

19. spacer 3.2|1067893|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to MN693145 (Marine virus AFVG_25M56, complete genome) position: , mismatch: 8, identity: 0.784

taaaagatgataataaaataaaacaacttttaaaaat	CRISPR spacer
aagagattgatgataaaataaaagaacttttaaaaac	Protospacer
 *.*.. ****.*********** ************.

20. spacer 3.2|1067893|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.784

taaaagatgataataaaataaaacaacttttaaaaat	CRISPR spacer
ttaaagatgaatataaaataaaacaacttaatgaaaa	Protospacer
* ********  *****************   .***

21. spacer 3.18|1068954|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

ttaaaaatttttttatactttttttcattgatattat	CRISPR spacer
atatcactttttttatacttcttttcatttataaggt	Protospacer
 **  * *************.******** ***  .*

22. spacer 3.19|1069021|37|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to LR214966 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12) position: , mismatch: 9, identity: 0.757

tttaacttccatttctttttatttattagttttatat	CRISPR spacer
tgtcataaatatttctttttatttattaatattatat	Protospacer
* * *.   .******************.* ******

23. spacer 3.26|1069491|35|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to NC_019764 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence) position: , mismatch: 9, identity: 0.743

gaagctgttttaaaaggtcaagaatacacaataga	CRISPR spacer
gaagctcttttaaaaggtcaagcattggcgacaat	Protospacer
****** *************** **  .*.*.*.

24. spacer 3.9|1068360|36|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to KX961630 (Bacillus phage QCM8, complete genome) position: , mismatch: 10, identity: 0.722

tggaagaacttaacaagaatgattataagttttgta	CRISPR spacer
aagaagaacttaagaagaatgattttaaaaagagtt	Protospacer
 .*********** ********** ***.    **

25. spacer 3.17|1068888|36|NZ_CP013121|CRISPRCasFinder,CRT,PILER-CR matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 10, identity: 0.722

taaattattaagagataatgctgagttaacaaatat	CRISPR spacer
agaattattaagagaaaatgctgatttattgtatga	Protospacer
 .************* ******** *** .. **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 7217

Saccharomonospora_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495583.1\|2024_3809_+	hypothetical protein	NA	NA	NA	NA
WP_060495584.1\|3818_7217_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	3.1e-168	32.2

DBSCAN-SWA_2

12327 : 17449

Geobacillus_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495588.1\|12327_13419_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	7.5e-100	51.9
WP_060495590.1\|14255_14546_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_060495591.1\|14520_14775_+	hypothetical protein	NA	NA	NA	NA
WP_060495592.1\|14888_15815_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	2.5e-48	38.9
WP_060495593.1\|15828_16686_+	type II restriction endonuclease	A0A2H4JAL2	uncultured_Caudovirales_phage	1.1e-24	29.5
WP_060495594.1\|16705_17449_+	methyltransferase domain-containing protein	A0A2I7R8J8	Vibrio_phage	2.1e-05	54.9

DBSCAN-SWA_3

25798 : 26986

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037477.1\|25798_26986_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	7.7e-42	30.3

DBSCAN-SWA_4

36248 : 36890

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_187102927.1\|36248_36890_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	9.0e-29	43.2

DBSCAN-SWA_5

41814 : 42576

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495611.1\|41814_42576_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-14	29.3

DBSCAN-SWA_6

51406 : 55134

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005898676.1\|51406_52099_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-30	37.7
WP_032845885.1\|52323_52746_+	FMN-binding protein	NA	NA	NA	NA
WP_023037451.1\|52807_53245_+	DUF4418 family protein	NA	NA	NA	NA
WP_060495617.1\|53248_54454_+	ABC transporter permease	NA	NA	NA	NA
WP_060495618.1\|54462_55134_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-27	33.8

DBSCAN-SWA_7

58602 : 59850

Bacteriophage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495619.1\|58602_59850_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	2.9e-63	39.8

DBSCAN-SWA_8

76883 : 80340

Only_Syngen_Nebraska_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005901204.1\|76883_77774_+	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	9.9e-26	30.0
WP_005898636.1\|77968_79246_+	dihydroorotase	NA	NA	NA	NA
WP_032835453.1\|79263_80340_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.5e-55	35.4

DBSCAN-SWA_9

87721 : 88339

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495633.1\|87721_88339_+	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	2.7e-06	27.3

DBSCAN-SWA_10

108574 : 109765

Clostridium_phage(100.0%)

integrase

attL 105963:105978|attR 111018:111033

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
105963:105978	attL	NA	NA	NA	NA
WP_008701329.1\|108574_109765_-\|integrase	site-specific integrase	A0A0A8WF01	Clostridium_phage	7.5e-29	29.7
WP_008701329.1\|108574_109765_-\|integrase	site-specific integrase	A0A0A8WF01	Clostridium_phage	7.5e-29	29.7
111018:111033	attR	NA	NA	NA	NA

DBSCAN-SWA_11

113085 : 115343

Wolbachia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008797651.1\|113085_114153_+	DUF1016 family protein	Q9JMP5	Wolbachia_phage	1.2e-86	46.5
WP_060495652.1\|114341_115343_+	DNA adenine methylase	A0A2L0UZL7	Agrobacterium_phage	1.4e-57	40.8

DBSCAN-SWA_12

133579 : 138507

Pectobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495666.1\|133579_134590_-	AAA family ATPase	A0A1L2CUT6	Pectobacterium_phage	7.3e-25	36.6
WP_060495667.1\|134586_135663_-	ThiF family adenylyltransferase	A0A1V0SCZ9	Indivirus	5.6e-07	30.9
WP_060495668.1\|136143_137346_+	MFS transporter	NA	NA	NA	NA
WP_060495669.1\|137364_138507_+	U32 family peptidase	A0A218M9Y5	Escherichia_phage	2.1e-28	27.4

DBSCAN-SWA_13

142331 : 155340

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496851.1\|142331_142916_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	2.7e-24	51.3
WP_060495674.1\|142943_143669_-	hypothetical protein	NA	NA	NA	NA
WP_060495675.1\|143759_144302_+	hypothetical protein	NA	NA	NA	NA
WP_060495676.1\|144322_144829_+	signal peptidase I	NA	NA	NA	NA
WP_060495677.1\|144813_146874_+	DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	4.3e-32	29.5
WP_060495678.1\|147102_149211_+	MobA/MobL family protein	NA	NA	NA	NA
WP_060495679.1\|149229_155340_+	DEAD/DEAH box helicase family protein	I3PUW5	Vibrio_phage	7.3e-269	37.8

DBSCAN-SWA_14

159448 : 164964

uncultured_Mediterranean_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032890747.1\|159448_160501_+	HesA/MoeB/ThiF family protein	A0A291ATS8	Pandoravirus	2.2e-08	32.7
WP_032890749.1\|160509_161064_+	hypothetical protein	NA	NA	NA	NA
WP_051429482.1\|161070_162441_+	adenylosuccinate lyase family protein	A0A1B1ISB0	uncultured_Mediterranean_phage	1.1e-12	24.9
WP_032890751.1\|162433_163597_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_032890753.1\|163599_164964_+	hypothetical protein	A0A1B1ISB0	uncultured_Mediterranean_phage	2.5e-12	25.8

DBSCAN-SWA_15

169340 : 171017

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495687.1\|169340_171017_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-15	31.5

DBSCAN-SWA_16

174023 : 181690

Indivirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495691.1\|174023_174743_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.1e-14	30.7
WP_060495692.1\|174909_175953_-	hypothetical protein	A0A0E3U2M6	Fusobacterium_phage	2.1e-14	50.3
WP_060495693.1\|178079_179903_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	1.5e-100	37.4
WP_060495694.1\|179935_181690_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	3.6e-112	40.3

DBSCAN-SWA_17

190097 : 195729

Wolbachia_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495698.1\|190097_192032_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.0e-59	29.6
WP_005898333.1\|192042_192510_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_171487425.1\|192528_192924_+	DUF1934 family protein	NA	NA	NA	NA
WP_060495699.1\|192940_194218_+	hypothetical protein	NA	NA	NA	NA
WP_005900807.1\|194247_195729_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	3.7e-94	43.0

DBSCAN-SWA_18

202770 : 203892

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495701.1\|202770_203892_+	M23 family metallopeptidase	Q8SBN9	Clostridium_phage	8.4e-14	43.6

DBSCAN-SWA_19

208435 : 209446

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005898363.1\|208435_209446_-	lactate dehydrogenase	M1H214	Paramecium_bursaria_Chlorella_virus	2.3e-42	34.7

DBSCAN-SWA_20

216239 : 216959

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005898376.1\|216239_216959_+	3-oxoacyl-[acyl-carrier-protein] reductase	A0A127AWG8	Bacillus_phage	6.0e-05	27.1

DBSCAN-SWA_21

228360 : 230712

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495712.1\|228360_230712_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A1V0SJM8	Klosneuvirus	1.7e-24	27.0

DBSCAN-SWA_22

233815 : 238554

Pseudomonas_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900778.1\|233815_234547_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A2P9FI75	Pseudomonas_phage	3.1e-09	32.4
WP_060495715.1\|234574_236284_-\|tRNA	arginine--tRNA ligase	A0A167RMV2	Powai_lake_megavirus	9.7e-78	35.8
WP_005898395.1\|236579_237425_-	patatin family protein	NA	NA	NA	NA
WP_060495716.1\|237549_238554_+	2-hydroxyacid dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	8.5e-58	39.0

DBSCAN-SWA_23

249351 : 256029

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495725.1\|249351_252117_-	SMC family ATPase	Q58MK7	Prochlorococcus_phage	4.6e-05	26.3
WP_060495726.1\|252106_253273_-	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_060495727.1\|253269_256029_-	ATP-dependent helicase	G3MA40	Bacillus_virus	4.8e-34	27.0

DBSCAN-SWA_24

262405 : 265108

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900759.1\|262405_262606_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.0e-18	73.3
WP_060495732.1\|262660_263716_-	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_060495733.1\|263929_264466_+	hypothetical protein	NA	NA	NA	NA
WP_060495734.1\|264529_265108_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.7e-23	38.1

DBSCAN-SWA_25

275180 : 279173

Mycobacterium_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900747.1\|275180_276320_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	5.6e-106	60.1
WP_060495738.1\|276288_276861_+	regulatory protein RecX	NA	NA	NA	NA
WP_060495739.1\|278069_279173_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	5.1e-104	51.9

DBSCAN-SWA_26

298973 : 303416

Xanthomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900727.1\|298973_299714_-	VWA domain-containing protein	A0A292GAU5	Xanthomonas_phage	8.8e-36	42.4
WP_023036531.1\|299883_300603_+	complement resistance protein TraT	NA	NA	NA	NA
WP_060495753.1\|300640_302329_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	3.1e-121	43.1
WP_060495754.1\|302312_303416_+	radical SAM family heme chaperone HemW	A0A1V0SKT9	Klosneuvirus	5.4e-05	24.8

DBSCAN-SWA_27

309575 : 311396

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495760.1\|309575_311396_+	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.3e-77	36.3

DBSCAN-SWA_28

319932 : 321841

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495764.1\|319932_320610_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-33	35.6
WP_060495765.1\|320624_321101_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_005898547.1\|321166_321841_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-36	37.3

DBSCAN-SWA_29

330593 : 332807

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495769.1\|330593_332807_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.3e-111	37.8

DBSCAN-SWA_30

336769 : 338521

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495774.1\|336769_338521_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-58	31.5

DBSCAN-SWA_31

349014 : 351117

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495781.1\|349014_351117_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.2e-72	37.1

DBSCAN-SWA_32

355255 : 362651

Bacillus_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495783.1\|355255_357169_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.3e-134	40.9
WP_060495784.1\|357181_357697_+	DUF4367 domain-containing protein	NA	NA	NA	NA
WP_060495785.1\|357843_359052_+	FprA family A-type flavoprotein	NA	NA	NA	NA
WP_060495786.1\|359207_360923_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.5e-33	25.8
WP_060495787.1\|360926_362651_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	28.7

DBSCAN-SWA_33

393125 : 396228

Fusobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495810.1\|393125_393485_+	DUF1353 domain-containing protein	A0A0E3Y4V5	Fusobacterium_phage	1.2e-49	76.5
WP_060495811.1\|393542_394508_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_060495812.1\|394504_395470_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_060495813.1\|395486_395858_-	hypothetical protein	NA	NA	NA	NA
WP_060495814.1\|395979_396228_-	hypothetical protein	A0A172JI00	Bacillus_phage	2.1e-10	38.7

DBSCAN-SWA_34

419231 : 420239

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005897741.1\|419231_420239_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-32	35.0

DBSCAN-SWA_35

435950 : 440170

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495841.1\|435950_436634_+	metal ABC transporter ATP-binding protein	M1HQ77	Paramecium_bursaria_Chlorella_virus	3.7e-12	28.7
WP_060495842.1\|436655_437573_+	metal ABC transporter permease	NA	NA	NA	NA
WP_060495843.1\|437569_438418_+	metal ABC transporter permease	NA	NA	NA	NA
WP_060495844.1\|438673_440170_+	SAM-dependent DNA methyltransferase	A0A2H4UVB0	Bodo_saltans_virus	8.3e-25	29.6

DBSCAN-SWA_36

443362 : 447796

uncultured_Caudovirales_phage(50.0%)

integrase

attL 434198:434212|attR 445124:445138

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
434198:434212	attL	NA	NA	NA	NA
WP_005897767.1\|443362_444352_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	4.5e-35	29.4
WP_060495848.1\|444412_447796_+	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	2.2e-17	25.3
445124:445138	attR	NA	NA	NA	NA

DBSCAN-SWA_37

453430 : 463864

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495852.1\|453430_454207_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	2.1e-08	27.4
WP_060495853.1\|454206_455094_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_060495854.1\|455295_456312_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005900566.1\|456876_458496_-	chaperonin GroEL	A0A219YK78	uncultured_virus	2.0e-157	58.5
WP_060495855.1\|458513_458786_-	molecular chaperone GroES	A0A221S4H9	uncultured_virus	3.4e-09	46.1
WP_060495856.1\|458972_461144_+	AAA family ATPase	NA	NA	NA	NA
WP_060495857.1\|461161_463864_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	1.2e-143	37.4

DBSCAN-SWA_38

471945 : 473571

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495864.1\|471945_473571_+	NFACT family protein	M1I5P2	Paramecium_bursaria_Chlorella_virus	1.5e-08	44.4

DBSCAN-SWA_39

479898 : 494597

Fusobacterium_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495868.1\|479898_480411_+	hypothetical protein	A0A0E3Y687	Fusobacterium_phage	2.1e-28	42.1
WP_060495869.1\|480487_481000_+	DUF5105 domain-containing protein	NA	NA	NA	NA
WP_060495870.1\|481018_481537_+	hypothetical protein	A0A0E3Y687	Fusobacterium_phage	1.6e-20	36.6
WP_060495871.1\|481592_482135_-	YadA-like family protein	NA	NA	NA	NA
WP_029491276.1\|482240_483164_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_060495872.1\|483264_485898_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	2.3e-38	26.3
WP_060495873.1\|485890_488596_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_029491279.1\|488609_489335_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.4e-23	28.0
WP_060495874.1\|489346_491950_+\|tRNA	alanine--tRNA ligase	A0A2K9L3D8	Tupanvirus	2.1e-68	36.8
WP_023037598.1\|491966_492383_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_023037597.1\|492405_493644_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_023037596.1\|493643_494597_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	6.2e-42	39.2

DBSCAN-SWA_40

513155 : 521878

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495885.1\|513155_515900_+	DNA polymerase I	A0A218MKQ4	uncultured_virus	3.6e-50	30.2
WP_060495886.1\|515918_516818_+	DNA-binding protein WhiA	NA	NA	NA	NA
WP_032836191.1\|516832_517792_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_023037592.1\|517763_518441_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	5.1e-06	25.0
WP_060495887.1\|518434_519904_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_060495888.1\|519969_520647_+	hypothetical protein	NA	NA	NA	NA
WP_060495889.1\|520663_521878_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.8e-46	33.5

DBSCAN-SWA_41

538956 : 540798

Pandoravirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037577.1\|538956_539661_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	A0A291ATS8	Pandoravirus	7.9e-26	36.7
WP_060495900.1\|539745_540798_-	Fic family protein	D7RWK9	Brochothrix_phage	6.2e-27	26.6

DBSCAN-SWA_42

546513 : 552085

Burkholderia_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032888310.1\|546513_547329_-	prohibitin family protein	Q8W6Q7	Burkholderia_virus	4.7e-06	23.0
WP_023037569.1\|547519_548758_+	peptidase T	NA	NA	NA	NA
WP_023037568.1\|548764_550465_+	YgiQ family radical SAM protein	M1QSD9	Pseudomonas_phage	9.7e-38	41.2
WP_032887488.1\|550609_552085_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	6.0e-44	30.0

DBSCAN-SWA_43

560371 : 566384

Powai_lake_megavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495909.1\|560371_560917_-	NADAR family protein	A0A167RLL2	Powai_lake_megavirus	5.1e-41	56.5
WP_005897887.1\|560925_562167_-	imidazolonepropionase	NA	NA	NA	NA
WP_060495910.1\|562249_563215_-	glutamate formimidoyltransferase	NA	NA	NA	NA
WP_060495911.1\|563429_563900_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.0e-25	41.3
WP_060495912.1\|563921_566384_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	6.9e-85	31.0

DBSCAN-SWA_44

578928 : 579474

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495922.1\|578928_579474_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.9e-13	35.5

DBSCAN-SWA_45

590029 : 590806

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032836117.1\|590029_590806_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.1e-16	30.9

DBSCAN-SWA_46

595299 : 598122

Heterosigma_akashiwo_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495931.1\|595299_596283_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	6.2e-61	43.5
WP_060495932.1\|596319_598122_-	elongation factor 4	A0A1B0RXH7	Streptococcus_phage	4.2e-23	26.4

DBSCAN-SWA_47

606267 : 610127

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495935.1\|606267_607110_-	YitT family protein	M1Q1P6	Streptococcus_phage	8.2e-46	37.4
WP_032836097.1\|607125_608244_-	ROK family protein	NA	NA	NA	NA
WP_060495936.1\|608576_610127_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	7.9e-103	40.2

DBSCAN-SWA_48

620034 : 622590

Stenotrophomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495941.1\|620034_622590_+	pyruvate, phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	2.5e-93	41.8

DBSCAN-SWA_49

627457 : 628186

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005898002.1\|627457_628186_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-36	40.4

DBSCAN-SWA_50

633476 : 640937

Anomala_cuprea_entomopoxvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900388.1\|633476_634316_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.8e-13	27.5
WP_060495945.1\|634340_635084_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_060495946.1\|635096_636653_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	2.1e-07	39.1
WP_060495947.1\|636695_637433_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_005898011.1\|637543_638164_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	7.7e-09	34.5
WP_032888430.1\|638163_638616_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_060495948.1\|638627_639650_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_060495949.1\|639664_640618_+	DUF4299 domain-containing protein	NA	NA	NA	NA
WP_005898015.1\|640661_640937_-	HU family DNA-binding protein	G3M9Y0	Bacillus_virus	1.0e-05	36.7

DBSCAN-SWA_51

644465 : 645845

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495952.1\|644465_645845_+	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	3.4e-97	42.6

DBSCAN-SWA_52

652816 : 653479

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005898026.1\|652816_653479_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-36	40.0

DBSCAN-SWA_53

680852 : 683222

Iris_mild_mosaic_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032888484.1\|680852_683222_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	3.4e-12	47.4

DBSCAN-SWA_54

686414 : 689915

Catovirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495973.1\|686414_688913_-	AMP-binding protein	A0A1V0SBX8	Catovirus	8.7e-35	24.4
WP_005898069.1\|688923_689073_-	hypothetical protein	NA	NA	NA	NA
WP_060495974.1\|689081_689915_-\|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	A0A0U2S5Z2	Escherichia_phage	2.0e-36	34.7

DBSCAN-SWA_55

693737 : 698925

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023036332.1\|693737_694094_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	3.0e-05	41.6
WP_023036333.1\|694108_694930_-	DUF4846 domain-containing protein	NA	NA	NA	NA
WP_060495975.1\|694949_696605_-	signal peptide peptidase SppA	NA	NA	NA	NA
WP_060495976.1\|696782_697301_-	NUDIX hydrolase	A0A1S6L1P8	Vibrio_phage	6.0e-07	34.4
WP_060495977.1\|697302_698073_-	RNA methyltransferase	NA	NA	NA	NA
WP_060495978.1\|698169_698925_-	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	9.7e-14	26.4

DBSCAN-SWA_56

705639 : 706863

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900306.1\|705639_706863_-	uracil-xanthine permease	Q9KX94	Enterobacteria_phage	4.5e-61	38.4

DBSCAN-SWA_57

718915 : 722569

Bacillus_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060495991.1\|718915_720007_+	AAA family ATPase	G3MAX6	Bacillus_virus	8.7e-56	40.0
WP_060495992.1\|720174_720408_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_060495994.1\|721318_722569_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	3.1e-57	40.0

DBSCAN-SWA_58

726859 : 727831

Tetraselmis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032835408.1\|726859_727831_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	3.0e-36	33.6

DBSCAN-SWA_59

731800 : 732526

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496002.1\|731800_732526_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.6e-13	30.2

DBSCAN-SWA_60

756017 : 756482

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032888555.1\|756017_756482_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	A0A0K0KVL9	Prochlorococcus_phage	3.8e-21	40.5

DBSCAN-SWA_61

781372 : 781912

Fusobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032888598.1\|781372_781912_-	methyltransferase	A0A0E3Y4U1	Fusobacterium_phage	1.4e-14	53.3

DBSCAN-SWA_62

791186 : 795153

Cellulophaga_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496035.1\|791186_791933_-	hypothetical protein	A0A0S2MWD3	Cellulophaga_phage	2.8e-05	26.0
WP_060496036.1\|791929_792688_-	hypothetical protein	NA	NA	NA	NA
WP_060496037.1\|792684_793458_-	hypothetical protein	A0A0S2MWD3	Cellulophaga_phage	3.4e-06	28.6
WP_005900196.1\|793482_794133_-	precorrin-8X methylmutase	NA	NA	NA	NA
WP_060496038.1\|794160_795153_-	Fic family protein	A0A1V0E025	Clostridioides_phage	9.1e-12	28.7

DBSCAN-SWA_63

807247 : 813653

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496049.1\|807247_808762_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.8e-59	43.2
WP_060496862.1\|808786_809083_-	hypothetical protein	NA	NA	NA	NA
WP_032835311.1\|809241_809826_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.4e-25	40.2
WP_060496050.1\|809813_810833_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SQF5	Cyanophage	3.3e-65	43.5
WP_060496051.1\|810844_812191_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.1e-52	32.0
WP_005896888.1\|812237_812951_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	1.9e-43	43.2
WP_060496052.1\|813179_813653_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.9e-24	47.6

DBSCAN-SWA_64

827421 : 828762

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023036434.1\|827421_828762_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	7.4e-25	24.9

DBSCAN-SWA_65

840507 : 842658

Rhodococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496066.1\|840507_842658_-	TerD family protein	A0A1I9SAC2	Rhodococcus_phage	1.1e-46	25.1

DBSCAN-SWA_66

860685 : 869348

Paramecium_bursaria_Chlorella_virus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023036456.1\|860685_863274_+	calcium-translocating P-type ATPase, PMCA-type	M1HN09	Paramecium_bursaria_Chlorella_virus	2.7e-79	30.1
WP_023036457.1\|863356_863821_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_005900134.1\|863910_864219_-	HU family DNA-binding protein	C8XUL7	Shigella_phage	4.1e-11	40.2
WP_005896779.1\|864361_865654_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.4e-60	35.4
WP_060496080.1\|865690_866560_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_032888739.1\|866559_867660_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_060496081.1\|867679_868120_-	dUTP diphosphatase	A0A1Q1PNN8	Noumeavirus	8.1e-37	52.5
WP_060496082.1\|868121_869348_-	insulinase family protein	G3MBJ8	Bacillus_virus	1.0e-41	31.2

DBSCAN-SWA_67

876279 : 877041

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496083.1\|876279_877041_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-30	35.9

DBSCAN-SWA_68

885576 : 887187

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032888783.1\|885576_887187_+	DUF2828 family protein	A0A249XZM4	Enterococcus_phage	2.1e-58	33.9

DBSCAN-SWA_69

911455 : 912466

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037982.1\|911455_912466_-	PLP-dependent cysteine synthase family protein	C3U2M1	Lactococcus_phage	1.8e-55	41.8

DBSCAN-SWA_70

919515 : 924693

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496091.1\|919515_920730_+	exodeoxyribonuclease VII large subunit	A0A1V0SC03	Catovirus	5.0e-44	30.8
WP_060496092.1\|920710_921487_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_060496093.1\|921512_922367_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_060496094.1\|922422_924693_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	2.2e-101	36.3

DBSCAN-SWA_71

928744 : 929779

uncultured_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496099.1\|928744_929779_+	signal recognition particle-docking protein FtsY	D6PHS7	uncultured_phage	4.1e-15	36.5

DBSCAN-SWA_72

933326 : 941200

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496103.1\|933326_935021_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-57	32.0
WP_005898919.1\|935068_935278_-	hypothetical protein	NA	NA	NA	NA
WP_060496104.1\|935385_937077_-	gamma-glutamyltransferase	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	1.0e-10	23.7
WP_060496105.1\|937297_937573_+	hypothetical protein	NA	NA	NA	NA
WP_023036921.1\|937569_938166_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_060496106.1\|938277_938526_+	hypothetical protein	NA	NA	NA	NA
WP_060496107.1\|938528_939071_+	cysteine hydrolase	NA	NA	NA	NA
WP_060496108.1\|939089_939638_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_060496109.1\|939850_941200_+	CoA-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	7.5e-09	25.8

DBSCAN-SWA_73

965861 : 969361

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023036941.1\|965861_966401_+	RNA 2'-phosphotransferase	A0A0A8WJJ2	Clostridium_phage	9.8e-53	59.0
WP_060496121.1\|966523_969361_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.2e-287	54.8

DBSCAN-SWA_74

972988 : 974547

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496125.1\|972988_973750_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-17	32.9
WP_060496126.1\|973767_974547_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-16	30.2

DBSCAN-SWA_75

981951 : 987666

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496132.1\|981951_983535_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.5e-152	51.6
WP_005896530.1\|983581_985093_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_060496133.1\|985191_987666_-	AMP-binding protein	A0A1V0SBX8	Catovirus	9.8e-39	29.3

DBSCAN-SWA_76

1005168 : 1005912

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496145.1\|1005168_1005912_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-19	28.3

DBSCAN-SWA_77

1013506 : 1014421

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005896493.1\|1013506_1014421_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.9e-25	43.7

DBSCAN-SWA_78

1021382 : 1024583

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496148.1\|1021382_1024583_-	UvrD-helicase domain-containing protein	A0A1P8CWU5	Bacillus_phage	5.4e-13	23.5

DBSCAN-SWA_79

1036353 : 1045229

Caulobacter_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496155.1\|1036353_1036878_+	peptide deformylase	A0A067XQZ3	Caulobacter_phage	7.7e-18	36.2
WP_023036986.1\|1036870_1037185_+	septum formation initiator family protein	NA	NA	NA	NA
WP_023036987.1\|1037181_1038222_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_060496866.1\|1039382_1040513_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	2.7e-116	60.5
WP_005896453.1\|1040972_1041767_+	glutamate racemase	NA	NA	NA	NA
WP_032887488.1\|1041922_1043398_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	6.0e-44	30.0
WP_060496158.1\|1043660_1044284_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.5e-20	34.7
WP_005898998.1\|1044305_1045229_+	NAD(P)/FAD-dependent oxidoreductase	A0A1V0SIN1	Klosneuvirus	1.0e-33	30.1

DBSCAN-SWA_80

1048664 : 1050167

Organic_Lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496161.1\|1048664_1050167_+	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	9.6e-13	33.7

DBSCAN-SWA_81

1080166 : 1082650

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496176.1\|1080166_1080940_-	NAD-dependent protein deacylase	S5M4R0	Bacillus_phage	2.5e-25	33.1
WP_005918309.1\|1081077_1081854_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.1e-15	28.1
WP_032889038.1\|1081843_1082650_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-15	29.6

DBSCAN-SWA_82

1091210 : 1093418

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496183.1\|1091210_1093418_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.1e-77	32.9

DBSCAN-SWA_83

1100241 : 1107319

Synechococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005899169.1\|1100241_1101018_-	NAD+ synthase	A0A222YW38	Synechococcus_phage	3.8e-21	30.6
WP_005896372.1\|1101029_1101899_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_005896370.1\|1101879_1102587_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.3e-48	45.9
WP_032835596.1\|1102597_1103917_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.2e-24	29.6
WP_032835594.1\|1103930_1104731_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_023037391.1\|1104708_1105533_-	HD domain-containing protein	NA	NA	NA	NA
WP_023037390.1\|1105516_1107319_-	1-deoxy-D-xylulose-5-phosphate synthase	G9E5U1	Micromonas_pusilla_virus	1.5e-07	29.3

DBSCAN-SWA_84

1115478 : 1119440

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037383.1\|1115478_1116495_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	6.3e-08	30.3
WP_023037382.1\|1116611_1117214_-	DUF445 family protein	NA	NA	NA	NA
WP_023037381.1\|1117413_1117869_+	hypothetical protein	NA	NA	NA	NA
WP_005896339.1\|1118519_1119440_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	7.0e-67	47.5

DBSCAN-SWA_85

1125702 : 1134409

Acanthocystis_turfacea_Chlorella_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037376.1\|1125702_1126518_+	hypothetical protein	M1I5Z5	Acanthocystis_turfacea_Chlorella_virus	1.2e-12	27.0
WP_023037375.1\|1126564_1127401_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.4e-58	44.8
WP_005899196.1\|1127390_1128848_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
WP_060496192.1\|1129074_1130235_-\|transposase	transposase	Q331V1	Clostridium_botulinum_C_phage	1.7e-110	58.8
WP_023037372.1\|1130278_1130980_-	uracil-DNA glycosylase	Q9YTL9	Ateline_herpesvirus	3.6e-47	45.4
WP_005899200.1\|1130986_1131664_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_080661864.1\|1131744_1132185_-	phosphohydrolase	NA	NA	NA	NA
WP_005899204.1\|1132168_1132930_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_005899207.1\|1132945_1134409_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.7e-103	42.3

DBSCAN-SWA_86

1139570 : 1143401

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032889112.1\|1139570_1140989_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.9e-16	24.9
WP_032889114.1\|1140994_1141702_+	CAP domain-containing protein	NA	NA	NA	NA
WP_032889116.1\|1141703_1142417_-	metallophosphoesterase	A0A127AVW0	Bacillus_phage	7.2e-11	29.5
WP_032889118.1\|1142543_1143401_+	ADP-ribosylglycohydrolase family protein	A0A2P1EM87	Moumouvirus	1.2e-07	23.5

DBSCAN-SWA_87

1149765 : 1150674

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032835218.1\|1149765_1150674_-	DUF1792 domain-containing protein	A0A1V0SAI7	Catovirus	1.2e-18	31.8

DBSCAN-SWA_88

1160208 : 1162190

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032889130.1\|1160208_1161513_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.9e-27	30.7
WP_032889132.1\|1161515_1162190_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-32	34.6

DBSCAN-SWA_89

1166489 : 1173018

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496869.1\|1166489_1167374_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.6e-76	52.6
WP_032889142.1\|1167385_1168003_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_060496195.1\|1168026_1169937_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	3.6e-97	38.5
WP_032889147.1\|1170160_1170784_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_005896230.1\|1170862_1171213_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_005899254.1\|1171281_1173018_-	signal peptide peptidase SppA	A0A2I6UH21	Salinibacter_virus	5.7e-09	37.2

DBSCAN-SWA_90

1176381 : 1182029

Leptospira_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496197.1\|1176381_1179444_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	5.5e-100	27.2
WP_008821102.1\|1179443_1179857_+	hypothetical protein	NA	NA	NA	NA
WP_060496198.1\|1179899_1181360_-	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
WP_060496199.1\|1181489_1182029_+	metallophosphoesterase	A0A0S2SYB0	Bacillus_phage	4.3e-16	42.6

DBSCAN-SWA_91

1201826 : 1204988

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005896166.1\|1201826_1203446_+	ATP-binding cassette domain-containing protein	A0A1V0SGN0	Hokovirus	9.6e-43	24.6
WP_005896164.1\|1203640_1203859_+	hypothetical protein	NA	NA	NA	NA
WP_005896162.1\|1203930_1204509_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_005896160.1\|1204523_1204988_-	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.0e-18	39.7

DBSCAN-SWA_92

1215567 : 1218664

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005896134.1\|1215567_1216824_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.0e-36	36.2
WP_060496215.1\|1216852_1218664_-	DNA primase	A0A1S5RG58	Helicobacter_phage	2.9e-40	29.1

DBSCAN-SWA_93

1227084 : 1227777

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496221.1\|1227084_1227777_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	5.4e-19	53.5

DBSCAN-SWA_94

1231951 : 1237819

Vibrio_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005896109.1\|1231951_1233025_-	peptide chain release factor 1	W8EDB3	Pseudomonas_phage	8.6e-08	41.2
WP_005899324.1\|1233049_1233484_-	hypothetical protein	NA	NA	NA	NA
WP_005899326.1\|1233488_1234517_-	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	3.4e-17	32.3
WP_005896104.1\|1234612_1234897_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_060496224.1\|1236406_1237819_-	hypothetical protein	R9TRQ8	Vibrio_phage	3.3e-15	26.8

DBSCAN-SWA_95

1241679 : 1243654

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496228.1\|1241679_1242654_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	7.1e-09	33.0
WP_032889244.1\|1242646_1243654_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-18	31.6

DBSCAN-SWA_96

1257775 : 1258891

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032834395.1\|1257775_1258891_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-28	36.1

DBSCAN-SWA_97

1261923 : 1264458

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496229.1\|1261923_1264458_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.1e-64	29.3

DBSCAN-SWA_98

1277378 : 1278527

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496240.1\|1277378_1278527_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.1e-113	56.9

DBSCAN-SWA_99

1282322 : 1283801

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081037914.1\|1282322_1283801_-	recombinase family protein	A0A0A7RTP8	Clostridium_phage	1.2e-63	35.6

DBSCAN-SWA_100

1295610 : 1295856

Fusobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496249.1\|1295610_1295856_-	hypothetical protein	A0A0E3Y4U1	Fusobacterium_phage	5.7e-16	54.5

DBSCAN-SWA_101

1300289 : 1300895

Bacillus_phage(100.0%)

integrase

attL 1295186:1295200|attR 1301193:1301207

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1295186:1295200	attL	NA	NA	NA	NA
WP_032889325.1\|1300289_1300895_+\|integrase	tyrosine-type recombinase/integrase	W8CYP1	Bacillus_phage	1.2e-17	35.0
WP_032889325.1\|1300289_1300895_+\|integrase	tyrosine-type recombinase/integrase	W8CYP1	Bacillus_phage	1.2e-17	35.0
1301193:1301207	attR	NA	NA	NA	NA

DBSCAN-SWA_102

1306985 : 1308179

Fusobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496257.1\|1306985_1308179_-	ParA family protein	A0A0E3Y677	Fusobacterium_phage	2.3e-33	37.4

DBSCAN-SWA_103

1319008 : 1324313

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496265.1\|1319008_1320040_+	hypothetical protein	I3PUW5	Vibrio_phage	1.4e-39	35.2
WP_187102905.1\|1319943_1320903_-	hypothetical protein	NA	NA	NA	NA
WP_081037916.1\|1320788_1321244_-	TnpV protein	NA	NA	NA	NA
WP_032889348.1\|1322171_1324313_-	type IA DNA topoisomerase	A0A2P1ELA0	Moumouvirus	5.2e-12	24.6

DBSCAN-SWA_104

1335090 : 1335993

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032835902.1\|1335090_1335993_+	phosphatidylserine decarboxylase	A0A2K9L169	Tupanvirus	5.0e-25	31.0

DBSCAN-SWA_105

1339320 : 1339824

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496272.1\|1339320_1339824_+	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	3.4e-23	50.4

DBSCAN-SWA_106

1351209 : 1361294

Bacillus_phage(40.0%)

integrase

attL 1343637:1343653|attR 1355844:1355860

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1343637:1343653	attL	NA	NA	NA	NA
WP_143403799.1\|1351209_1351758_+	translation initiation factor IF-3	A0A1L2CV30	Pectobacterium_phage	1.6e-10	31.5
WP_005895942.1\|1351835_1352042_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_005895940.1\|1352066_1352417_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_008799732.1\|1352932_1354150_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	6.5e-28	26.6
WP_008799733.1\|1354215_1354434_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060496278.1\|1354451_1355063_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_008799735.1\|1355172_1355367_-	hypothetical protein	NA	NA	NA	NA
WP_020975278.1\|1355414_1355561_-	hypothetical protein	NA	NA	NA	NA
WP_060496279.1\|1355564_1356017_-	hypothetical protein	NA	NA	NA	NA
1355844:1355860	attR	NA	NA	NA	NA
WP_060496280.1\|1356048_1356291_-	hypothetical protein	NA	NA	NA	NA
WP_187102907.1\|1356461_1356608_-	hypothetical protein	NA	NA	NA	NA
WP_060496281.1\|1356706_1356952_-	hypothetical protein	A0A0E3Y4U1	Fusobacterium_phage	1.3e-15	54.5
WP_060496282.1\|1357004_1357229_-	hypothetical protein	NA	NA	NA	NA
WP_060496283.1\|1357261_1357519_-	hypothetical protein	NA	NA	NA	NA
WP_008799741.1\|1357627_1357966_-	hypothetical protein	NA	NA	NA	NA
WP_187102909.1\|1358042_1358213_-	hypothetical protein	NA	NA	NA	NA
WP_060496284.1\|1358473_1359145_-	hypothetical protein	NA	NA	NA	NA
WP_008799747.1\|1359153_1359855_-	ParA family protein	A0A0E3Y677	Fusobacterium_phage	7.8e-26	33.0
WP_008799748.1\|1360041_1360353_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008799749.1\|1360373_1360682_-	conjugal transfer protein TraD	NA	NA	NA	NA
WP_060496285.1\|1360685_1361294_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	1.0e-29	54.9

DBSCAN-SWA_107

1365264 : 1380417

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020975282.1\|1365264_1365906_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	1.7e-11	30.6
WP_008799755.1\|1365907_1366654_-	Fic family protein	D7RWK9	Brochothrix_phage	2.8e-13	29.6
WP_060496287.1\|1366665_1367565_-	zeta toxin family protein	NA	NA	NA	NA
WP_008802984.1\|1367569_1367809_-	hypothetical protein	NA	NA	NA	NA
WP_060496288.1\|1368058_1368934_-	hypothetical protein	NA	NA	NA	NA
WP_060496289.1\|1368985_1375351_-	DEAD/DEAH box helicase family protein	I3PUW5	Vibrio_phage	6.2e-279	37.7
WP_060496290.1\|1375426_1377100_-	toprim domain-containing protein	NA	NA	NA	NA
WP_060496291.1\|1377483_1377990_-	hypothetical protein	NA	NA	NA	NA
WP_060496292.1\|1378002_1380417_-	DNA topoisomerase I	A0A1X9I6W8	Streptococcus_phage	1.6e-22	24.3

DBSCAN-SWA_108

1405287 : 1407111

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496318.1\|1405287_1407111_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-90	32.6

DBSCAN-SWA_109

1414547 : 1418575

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496326.1\|1414547_1415054_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A2D0YYZ1	Vibrio_phage	2.3e-35	48.7
WP_023037623.1\|1415058_1417245_-	anaerobic ribonucleoside-triphosphate reductase	K4F9T2	Cronobacter_phage	1.3e-156	42.7
WP_060496327.1\|1417504_1418575_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-33	36.9

DBSCAN-SWA_110

1422944 : 1427311

Planktothrix_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496328.1\|1422944_1423709_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-14	29.8
WP_005899413.1\|1423711_1424758_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-17	27.6
WP_005899416.1\|1424767_1425802_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005899418.1\|1425836_1426451_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.9e-20	30.6
WP_005899421.1\|1426480_1427311_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.6e-09	27.1

DBSCAN-SWA_111

1431277 : 1435548

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496329.1\|1431277_1433056_-\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	3.5e-14	26.3
WP_005895853.1\|1433074_1434313_-\|tRNA	histidine--tRNA ligase	A0A2I2L577	Orpheovirus	6.7e-20	27.7
WP_060496330.1\|1434324_1435548_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.3e-81	43.5

DBSCAN-SWA_112

1440516 : 1448955

Moraxella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081037919.1\|1440516_1448955_+	hemagglutinin repeat-containing protein	A0A0R6PJK4	Moraxella_phage	1.3e-21	28.9

DBSCAN-SWA_113

1462226 : 1462754

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496337.1\|1462226_1462754_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	2.6e-13	32.4

DBSCAN-SWA_114

1465877 : 1470227

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496340.1\|1465877_1470227_+	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	9.8e-26	39.4

DBSCAN-SWA_115

1480489 : 1481245

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005895818.1\|1480489_1481245_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.9e-32	39.4

DBSCAN-SWA_116

1484284 : 1485436

Enterococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496875.1\|1484284_1485436_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.0e-115	60.2

DBSCAN-SWA_117

1493597 : 1500941

Tetraselmis_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496354.1\|1493597_1495829_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	3.9e-172	42.3
WP_005899488.1\|1495889_1496621_+	pyruvate formate lyase-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.5e-24	30.0
WP_060496355.1\|1496639_1498274_-	AAA family ATPase	NA	NA	NA	NA
WP_005895802.1\|1498463_1498844_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023038104.1\|1498845_1499067_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_060496356.1\|1499096_1500941_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.1e-110	35.6

DBSCAN-SWA_118

1516825 : 1525506

uncultured_virus(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081037924.1\|1516825_1519135_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.3e-89	33.1
WP_005899519.1\|1519169_1519364_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_060496367.1\|1519510_1520866_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	5.3e-55	33.8
WP_060496368.1\|1520878_1522237_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_060496369.1\|1522252_1522747_-	dihydrofolate reductase	NA	NA	NA	NA
WP_060496370.1\|1522746_1523574_-	thymidylate synthase	S5MA34	Bacillus_phage	2.4e-42	34.4
WP_032834547.1\|1523622_1523976_-	hypothetical protein	NA	NA	NA	NA
WP_060496371.1\|1524354_1525506_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	3.0e-115	59.9

DBSCAN-SWA_119

1528930 : 1529659

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496375.1\|1528930_1529659_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-28	35.6

DBSCAN-SWA_120

1546003 : 1556602

Acidithiobacillus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496386.1\|1546003_1547728_-	AAA family ATPase	K4I1H4	Acidithiobacillus_phage	7.5e-46	35.2
WP_023036768.1\|1547799_1547940_-	hypothetical protein	NA	NA	NA	NA
WP_060496387.1\|1548177_1549602_-	carbon starvation protein A	NA	NA	NA	NA
WP_060496388.1\|1549778_1551455_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	8.7e-47	29.7
WP_060496389.1\|1551447_1552170_+	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	4.7e-18	32.5
WP_005895694.1\|1552192_1553056_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_032847261.1\|1553052_1553706_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_060496390.1\|1553889_1554642_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005895688.1\|1554761_1555514_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	6.9e-20	43.6
WP_060496391.1\|1555513_1556086_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_032889755.1\|1556095_1556602_+	HAD family hydrolase	E3T535	Cafeteria_roenbergensis_virus	3.2e-21	38.4

DBSCAN-SWA_121

1560443 : 1562834

Phormidium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496397.1\|1560443_1562834_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	U5XGM6	Phormidium_phage	3.7e-67	38.0

DBSCAN-SWA_122

1566437 : 1567541

Geobacillus_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496400.1\|1566437_1567541_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	1.4e-101	51.6

DBSCAN-SWA_123

1582671 : 1585102

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496407.1\|1582671_1584330_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.1e-25	34.1
WP_060496408.1\|1584316_1585102_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	5.9e-06	28.8

DBSCAN-SWA_124

1607545 : 1611736

Roseobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005899618.1\|1607545_1608439_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	3.4e-10	31.6
WP_060496415.1\|1608487_1611736_-	homocysteine S-methyltransferase family protein	A0A140XBC7	Dickeya_phage	3.2e-05	37.7

DBSCAN-SWA_125

1617652 : 1622519

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496419.1\|1617652_1618144_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.1e-21	37.7
WP_060496420.1\|1618164_1619406_-	hypothetical protein	NA	NA	NA	NA
WP_060496421.1\|1619430_1620807_-	ribonuclease E/G	NA	NA	NA	NA
WP_060496422.1\|1620781_1621828_-	radical SAM protein	A0A0N7G7K6	Chrysochromulina_ericina_virus	1.5e-09	20.8
WP_060496423.1\|1621814_1622519_-	ribonuclease III	E3T4V2	Cafeteria_roenbergensis_virus	5.5e-19	31.0

DBSCAN-SWA_126

1641634 : 1645052

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496441.1\|1641634_1643392_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	2.6e-17	24.8
WP_060496442.1\|1643369_1645052_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.9e-15	23.6

DBSCAN-SWA_127

1652885 : 1658260

Phage_TP(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496450.1\|1652885_1654109_-	U32 family peptidase	Q6DW11	Phage_TP	1.4e-54	38.2
WP_060496451.1\|1654142_1655483_-	replicative DNA helicase	O80281	Escherichia_phage	3.4e-86	42.2
WP_023036848.1\|1655494_1655944_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_060496452.1\|1655960_1656791_-	hypothetical protein	NA	NA	NA	NA
WP_060496453.1\|1656805_1658260_-	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	9.2e-45	37.8

DBSCAN-SWA_128

1666628 : 1669178

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023036858.1\|1666628_1667300_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.4e-16	27.6
WP_060496456.1\|1667306_1669178_-	response regulator	A0A1V0SGX0	Hokovirus	2.9e-27	25.4

DBSCAN-SWA_129

1691636 : 1692620

Flamingopox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032889887.1\|1691636_1692620_+	NAD(P)-dependent oxidoreductase	A0A2H4X257	Flamingopox_virus	2.0e-11	25.4

DBSCAN-SWA_130

1695786 : 1697094

Cassava_brown_streak_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496458.1\|1695786_1697094_+	ribonuclease PH	E5DUE6	Cassava_brown_streak_virus	7.5e-14	31.4

DBSCAN-SWA_131

1715815 : 1716631

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005899730.1\|1715815_1716631_-	3-keto-5-aminohexanoate cleavage protein	A0A1V0SL81	Klosneuvirus	3.7e-43	39.4

DBSCAN-SWA_132

1726608 : 1732331

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496472.1\|1726608_1727331_-	glycerophosphodiester phosphodiesterase	A0A076G4Q2	Staphylococcus_phage	1.2e-29	35.0
WP_005897177.1\|1727486_1728194_-	glucosaminidase domain-containing protein	M1IDP9	Pelagibacter_phage	1.2e-10	37.1
WP_032889932.1\|1728303_1728633_-	hypothetical protein	NA	NA	NA	NA
WP_005897180.1\|1728648_1729734_-	ABC transporter permease	NA	NA	NA	NA
WP_005899742.1\|1729726_1730746_-	ABC transporter permease	NA	NA	NA	NA
WP_060496473.1\|1730747_1732331_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.0e-14	28.9

DBSCAN-SWA_133

1736339 : 1739264

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496476.1\|1736339_1737443_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	6.8e-101	50.8
WP_005897204.1\|1738115_1738769_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_032889952.1\|1738778_1739264_-	cytidine/deoxycytidylate deaminase family protein	A0A0M4K765	Mollivirus	2.8e-46	58.1

DBSCAN-SWA_134

1748222 : 1750322

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496480.1\|1748222_1749659_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.3e-56	37.5
WP_060496481.1\|1749734_1750322_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	8.3e-29	40.0

DBSCAN-SWA_135

1759671 : 1763276

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496488.1\|1759671_1761855_-	metallophosphoesterase	Q4Z932	Staphylococcus_phage	1.2e-109	36.6
WP_060496489.1\|1761998_1763276_-	adenylosuccinate synthase	L7Y4J5	Megavirus	6.1e-69	35.3

DBSCAN-SWA_136

1807680 : 1811290

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496504.1\|1807680_1808253_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.4e-49	56.1
WP_060496505.1\|1808262_1809105_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_060496506.1\|1809121_1810321_-	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	6.8e-70	38.7
WP_060496507.1\|1810432_1811290_-	dTDP-4-dehydrorhamnose reductase	A0A2P1ELT6	Moumouvirus	3.0e-11	29.5

DBSCAN-SWA_137

1821030 : 1825865

Acanthamoeba_polyphaga_moumouvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496516.1\|1821030_1821894_-	NAD(P)-dependent oxidoreductase	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	3.2e-13	23.9
WP_060496517.1\|1821820_1822639_-	metallophosphoesterase family protein	A0A0A0YRJ8	Escherichia_phage	3.1e-05	31.1
WP_060496518.1\|1822668_1825101_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_060496519.1\|1825127_1825865_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-07	23.5

DBSCAN-SWA_138

1829388 : 1830252

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496524.1\|1829388_1830252_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.0e-103	63.5

DBSCAN-SWA_139

1833577 : 1837042

Lake_Baikal_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496527.1\|1833577_1834576_-	ADP-glyceromanno-heptose 6-epimerase	A0A2H4N7X9	Lake_Baikal_phage	1.3e-18	30.2
WP_060496528.1\|1834759_1837042_+	autotransporter phospholipase A1 FplA	A0A1V0SCG0	Catovirus	4.8e-16	31.8

DBSCAN-SWA_140

1843623 : 1844979

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496534.1\|1843623_1844979_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	3.9e-74	33.8

DBSCAN-SWA_141

1852492 : 1854583

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496538.1\|1852492_1854583_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	9.3e-107	36.0

DBSCAN-SWA_142

1868553 : 1870501

Pandoravirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496548.1\|1868553_1869906_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	7.5e-41	39.4
WP_023037237.1\|1869889_1870501_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-41	42.9

DBSCAN-SWA_143

1890678 : 1891983

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496565.1\|1890678_1891983_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.1e-153	64.9

DBSCAN-SWA_144

1898625 : 1899450

Bathycoccus_sp._RCC1105_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496566.1\|1898625_1899450_+	ethanolamine utilization protein EutJ	E5EQT9	Bathycoccus_sp._RCC1105_virus	4.3e-07	24.5

DBSCAN-SWA_145

1903604 : 1904585

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496569.1\|1903604_1904585_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	9.6e-14	28.6

DBSCAN-SWA_146

1908391 : 1916297

Hokovirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032834203.1\|1908391_1910119_-	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.2e-14	29.8
WP_005888910.1\|1910185_1910449_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_060496572.1\|1910679_1911825_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	3.9e-115	60.2
WP_060496573.1\|1912121_1912361_+	hypothetical protein	NA	NA	NA	NA
WP_060496574.1\|1912662_1913793_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.0e-30	36.0
WP_060496575.1\|1913779_1914634_+	ABC transporter permease	NA	NA	NA	NA
WP_060496576.1\|1914626_1915412_+	ABC transporter permease	NA	NA	NA	NA
WP_005900041.1\|1915472_1916297_+	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	6.4e-19	39.3

DBSCAN-SWA_147

1926045 : 1926735

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037687.1\|1926045_1926735_-	metal ABC transporter ATP-binding protein	M1ID50	Paramecium_bursaria_Chlorella_virus	1.7e-09	28.6

DBSCAN-SWA_148

1938577 : 1939429

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005897665.1\|1938577_1939429_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.6e-07	29.5

DBSCAN-SWA_149

1945060 : 1949223

Cafeteria_roenbergensis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496591.1\|1945060_1946242_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.2e-34	36.0
WP_060496592.1\|1946289_1946802_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2K9L698	Tupanvirus	2.4e-16	32.9
WP_060496593.1\|1946877_1947378_-	hypothetical protein	NA	NA	NA	NA
WP_005900084.1\|1947393_1949223_-	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	2.8e-139	47.5

DBSCAN-SWA_150

1953154 : 1954420

uncultured_Mediterranean_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032890268.1\|1953154_1954420_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.3e-94	54.9

DBSCAN-SWA_151

1968003 : 1971298

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005897713.1\|1968003_1969038_-	ribonucleotide-diphosphate reductase subunit beta	M4QT54	Vibrio_phage	1.2e-78	45.2
WP_060496598.1\|1969030_1971298_-	ribonucleoside-diphosphate reductase subunit alpha	A2PYM7	Cyanophage	3.0e-143	38.8

DBSCAN-SWA_152

1978187 : 1980008

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496601.1\|1978187_1980008_-	acetyltransferase	W6MVL2	Pseudomonas_phage	7.5e-20	28.4

DBSCAN-SWA_153

1983485 : 1992867

Pandoravirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496603.1\|1983485_1984043_-	guanylate kinase	S4W1R9	Pandoravirus	6.2e-10	41.2
WP_060496604.1\|1984245_1985124_-	YicC family protein	NA	NA	NA	NA
WP_060496605.1\|1985317_1989277_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	7.5e-73	27.9
WP_060496606.1\|1989312_1992867_-	DNA-directed RNA polymerase subunit beta	A0A1X6WEN1	Pacmanvirus	2.5e-27	28.4

DBSCAN-SWA_154

2014457 : 2019306

uncultured_Mediterranean_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496613.1\|2014457_2015915_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	6.6e-19	29.6
WP_060496614.1\|2015975_2016575_-	hypothetical protein	NA	NA	NA	NA
WP_060496615.1\|2016922_2017147_-	hypothetical protein	NA	NA	NA	NA
WP_060496616.1\|2018058_2019306_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	2.6e-64	39.8

DBSCAN-SWA_155

2026350 : 2030075

Bacteriophage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496618.1\|2026350_2027598_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	2.4e-62	39.5
WP_005901008.1\|2029298_2030075_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.0e-15	26.8

DBSCAN-SWA_156

2039145 : 2040693

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023037061.1\|2039145_2040693_-	type II secretion system protein GspD	D0U174	Enterobacteria_phage	8.1e-15	25.6

DBSCAN-SWA_157

2049080 : 2049515

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496621.1\|2049080_2049515_-	GNAT family N-acetyltransferase	E3T5G3	Cafeteria_roenbergensis_virus	3.6e-05	31.5

DBSCAN-SWA_158

2053538 : 2055440

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496626.1\|2053538_2055440_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	5.6e-50	28.2

DBSCAN-SWA_159

2059502 : 2060234

Microcystis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496886.1\|2059502_2060234_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	2.6e-11	27.5

DBSCAN-SWA_160

2065070 : 2066060

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496630.1\|2065070_2066060_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.7e-56	39.7

DBSCAN-SWA_161

2069212 : 2077535

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496633.1\|2069212_2071609_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.2e-09	29.0
WP_005895121.1\|2071649_2072666_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L070	Tupanvirus	1.1e-33	38.2
WP_060496634.1\|2072692_2073154_-	metallophosphoesterase	NA	NA	NA	NA
WP_005900945.1\|2073166_2075602_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	7.5e-116	34.6
WP_060496635.1\|2075627_2077535_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	9.3e-146	45.5

DBSCAN-SWA_162

2082240 : 2082489

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005895160.1\|2082240_2082489_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.0e-24	63.2

DBSCAN-SWA_163

2088459 : 2093132

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496640.1\|2088459_2089752_+	L-aspartate oxidase	M1GXT4	Acanthocystis_turfacea_Chlorella_virus	4.1e-28	31.3
WP_060496641.1\|2089729_2090590_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_032890435.1\|2090582_2091092_+	transcription repressor NadR	NA	NA	NA	NA
WP_060496642.1\|2091107_2091371_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_141757152.1\|2091372_2091501_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_008694117.1\|2091502_2092267_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_060496643.1\|2092625_2093132_-	AAA family ATPase	A0A097BYE2	Leuconostoc_phage	6.1e-12	30.5

DBSCAN-SWA_164

2122285 : 2123071

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005895313.1\|2122285_2123071_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.2e-12	26.8

DBSCAN-SWA_165

2126314 : 2130280

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496661.1\|2126314_2127823_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.2e-07	25.5
WP_005895301.1\|2128077_2128566_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_060496662.1\|2128558_2130280_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	2.0e-75	32.9

DBSCAN-SWA_166

2140884 : 2142270

Megavirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005900877.1\|2140884_2142270_-\|tRNA	asparagine--tRNA ligase	A0A2P1EJK5	Megavirus	4.9e-88	38.1

DBSCAN-SWA_167

2145904 : 2156364

Cafeteria_roenbergensis_virus(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032890524.1\|2145904_2146666_+	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	1.3e-63	49.4
WP_023037534.1\|2146726_2147485_-	HAD family hydrolase	NA	NA	NA	NA
WP_032834282.1\|2147805_2148333_+	hypothetical protein	NA	NA	NA	NA
WP_060496666.1\|2148491_2150213_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	1.4e-60	32.1
WP_005895366.1\|2150341_2150704_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.6e-17	46.6
WP_060496667.1\|2150705_2151980_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_060496668.1\|2152178_2153387_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	1.1e-62	35.0
WP_005900864.1\|2153504_2153993_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_060496669.1\|2153989_2154640_+	endonuclease III	NA	NA	NA	NA
WP_005895386.1\|2154718_2155915_+	cysteine desulfurase NifS	NA	NA	NA	NA
WP_005895388.1\|2155977_2156364_+	Fe-S cluster assembly scaffold protein NifU	A0A2H4N7M4	Lake_Baikal_phage	9.3e-29	53.5

DBSCAN-SWA_168

2160784 : 2161144

Fusobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496671.1\|2160784_2161144_+	DUF1353 domain-containing protein	A0A0E3Y4V5	Fusobacterium_phage	9.5e-28	52.5

DBSCAN-SWA_169

2170961 : 2173763

Moumouvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496674.1\|2170961_2173763_+\|tRNA	isoleucine--tRNA ligase	A0A2P1ELB8	Moumouvirus	8.9e-97	28.3

DBSCAN-SWA_170

2177495 : 2180254

Pneumococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496677.1\|2177495_2178047_+	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.8e-30	39.5
WP_060496678.1\|2178096_2179488_+	N-6 DNA methylase	NA	NA	NA	NA
WP_060496679.1\|2179474_2180254_+	methyltransferase domain-containing protein	A0A1D8KJ61	Synechococcus_phage	1.9e-12	37.4

DBSCAN-SWA_171

2183282 : 2184110

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496684.1\|2183282_2184110_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.4e-26	28.4

DBSCAN-SWA_172

2201207 : 2201519

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005895481.1\|2201207_2201519_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	2.8e-12	36.5

DBSCAN-SWA_173

2208854 : 2218832

Bodo_saltans_virus(20.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005894893.1\|2208854_2211098_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	2.1e-24	24.1
WP_005918919.1\|2211113_2211476_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_032835030.1\|2211484_2213149_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.0e-56	28.1
WP_023037753.1\|2213164_2214544_+	trigger factor	NA	NA	NA	NA
WP_032890581.1\|2214651_2215233_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.0e-51	55.6
WP_032890583.1\|2215244_2216516_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.3e-124	56.4
WP_060496694.1\|2216525_2218832_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	4.8e-165	41.9

DBSCAN-SWA_174

2224123 : 2232905

Bacillus_virus(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496698.1\|2224123_2226787_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.2e-171	42.5
WP_023037744.1\|2227277_2227721_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_060496699.1\|2227720_2229262_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_060496700.1\|2229261_2229984_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-26	35.5
WP_060496701.1\|2229997_2230549_+	glutathione peroxidase	NA	NA	NA	NA
WP_060496702.1\|2230493_2231297_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_060496703.1\|2231293_2232127_-	energy-coupling factor transporter ATPase	G3M9Y6	Bacillus_virus	1.8e-16	28.1
WP_060496704.1\|2232110_2232905_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.3e-16	29.5

DBSCAN-SWA_175

2240266 : 2243232

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005894798.1\|2240266_2241217_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	6.0e-45	36.7
WP_032835955.1\|2241218_2242562_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	3.9e-34	35.5
WP_005901342.1\|2242572_2243232_-	J domain-containing protein	A0A2H4UVL7	Bodo_saltans_virus	5.0e-06	49.2

DBSCAN-SWA_176

2249968 : 2263840

Bacillus_virus(25.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496713.1\|2249968_2251606_-	FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	3.3e-51	37.1
WP_005901335.1\|2251894_2252461_-	peroxiredoxin	NA	NA	NA	NA
WP_060496714.1\|2253044_2254157_-	YibE/F family protein	NA	NA	NA	NA
WP_005890045.1\|2254228_2254486_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_060496715.1\|2254599_2256744_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5ESM9	Bathycoccus_sp._RCC1105_virus	4.6e-117	49.6
WP_023037716.1\|2256740_2258087_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_032833931.1\|2258329_2259262_-	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_023038021.1\|2259299_2260889_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.6e-53	33.7
WP_032833929.1\|2261011_2263840_+	DUF3427 domain-containing protein	Q5YA94	Bacillus_phage	1.2e-29	27.8

DBSCAN-SWA_177

2270752 : 2271526

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023038029.1\|2270752_2271526_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.8e-14	28.9

DBSCAN-SWA_178

2276315 : 2280234

Phormidium_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496717.1\|2276315_2277887_+	AAA family ATPase	U5XJW0	Phormidium_phage	5.4e-51	28.9
WP_005901313.1\|2277899_2278391_+	hypothetical protein	NA	NA	NA	NA
WP_060496718.1\|2279130_2280234_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	8.6e-104	52.2

DBSCAN-SWA_179

2284014 : 2290472

Enterococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496892.1\|2284014_2285166_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	3.0e-115	60.2
WP_023038128.1\|2286018_2286228_+	hypothetical protein	NA	NA	NA	NA
WP_005894721.1\|2286264_2286519_+	hypothetical protein	NA	NA	NA	NA
WP_060496719.1\|2286528_2287290_+	hypothetical protein	NA	NA	NA	NA
WP_060496720.1\|2287293_2287668_+	hypothetical protein	NA	NA	NA	NA
WP_060496721.1\|2287830_2288565_+	glycerophosphodiester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	5.3e-17	29.4
WP_005894713.1\|2288570_2289935_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_060496722.1\|2289944_2290472_+	macro domain-containing protein	A0A0K1L687	Scale_drop_disease_virus	1.3e-33	49.4

DBSCAN-SWA_180

2305179 : 2307756

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496729.1\|2305179_2307756_-	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	2.4e-120	37.0

DBSCAN-SWA_181

2313742 : 2320783

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496735.1\|2313742_2315938_+	DUF3656 domain-containing protein	Q6DW11	Phage_TP	2.7e-24	27.3
WP_032887342.1\|2315937_2316453_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_032887344.1\|2316463_2317660_+	CinA family nicotinamide mononucleotide deamidase-related protein	B5TK85	Pseudomonas_phage	1.1e-16	40.7
WP_032834231.1\|2317679_2318234_+	cupin domain-containing protein	A0A1W6JPB6	Staphylococcus_phage	6.0e-05	40.3
WP_060496736.1\|2318245_2320783_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	4.3e-13	35.0

DBSCAN-SWA_182

2324989 : 2325955

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496740.1\|2324989_2325955_+	DNA adenine methylase	E0YIY3	Lactococcus_phage	6.0e-69	47.2

DBSCAN-SWA_183

2345558 : 2347034

Staphylococcus_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496749.1\|2345558_2347034_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	6.0e-44	30.2

DBSCAN-SWA_184

2360633 : 2361707

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496755.1\|2360633_2361707_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	8.6e-08	35.7

DBSCAN-SWA_185

2379273 : 2379933

Fusobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005894562.1\|2379273_2379933_-	helix-turn-helix transcriptional regulator	A0A0E3U270	Fusobacterium_phage	1.4e-37	42.9

DBSCAN-SWA_186

2384523 : 2392565

Bacillus_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496766.1\|2384523_2385627_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	5.4e-106	53.0
WP_060496767.1\|2385976_2386309_+	DUF3870 domain-containing protein	NA	NA	NA	NA
WP_060496768.1\|2386312_2387761_+	hypothetical protein	NA	NA	NA	NA
WP_060496769.1\|2388117_2390454_+	endonuclease MutS2	F2Y0V3	Organic_Lake_phycodnavirus	8.4e-16	28.0
WP_060496770.1\|2390429_2391125_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_060496771.1\|2391143_2392565_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.3e-51	31.2

DBSCAN-SWA_187

2396587 : 2397592

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496773.1\|2396587_2397592_+	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.8e-07	25.2

DBSCAN-SWA_188

2403540 : 2406896

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496776.1\|2403540_2405622_+	elongation factor G	E4ZFJ7	Streptococcus_phage	1.5e-64	26.7
WP_032887443.1\|2405711_2406896_+	elongation factor Tu	A0A2K9KZ60	Tupanvirus	5.8e-13	25.8

DBSCAN-SWA_189

2421410 : 2422295

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032887447.1\|2421410_2422295_-	SPFH/Band 7/PHB domain protein	A0A2K9KZA2	Tupanvirus	6.9e-19	29.7

DBSCAN-SWA_190

2432535 : 2434288

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032836277.1\|2432535_2433522_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-18	29.4
WP_032836278.1\|2433502_2434288_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-20	34.2

DBSCAN-SWA_191

2438510 : 2445089

Vibrio_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032836280.1\|2438510_2439752_-	AAA family ATPase	A0A2I7RNF1	Vibrio_phage	2.7e-05	25.7
WP_060496781.1\|2439891_2441163_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_060496782.1\|2441172_2441877_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_032836285.1\|2441887_2442502_+	sigma-70 family RNA polymerase sigma factor	U5PUF5	Bacillus_phage	1.0e-05	36.0
WP_060496783.1\|2442509_2445089_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	9.8e-191	43.1

DBSCAN-SWA_192

2452804 : 2458976

Staphylococcus_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496789.1\|2452804_2453719_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	2.6e-82	54.8
WP_060496790.1\|2454022_2454748_+	hypothetical protein	NA	NA	NA	NA
WP_060496791.1\|2454813_2455125_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_060496792.1\|2455121_2455415_+	hypothetical protein	NA	NA	NA	NA
WP_060496793.1\|2455479_2456679_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.9e-106	52.3
WP_060496794.1\|2456688_2457345_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.1e-32	39.6
WP_060496795.1\|2457403_2458513_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	3.0e-48	36.6
WP_005898119.1\|2458514_2458976_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.3e-41	55.3

DBSCAN-SWA_193

2466904 : 2486617

Prochlorococcus_phage(11.11%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496801.1\|2466904_2467837_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.7e-13	34.4
WP_005901138.1\|2467830_2468682_+	bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	4.3e-34	38.7
WP_005898133.1\|2468695_2469157_+	ACT domain-containing protein	NA	NA	NA	NA
WP_032834872.1\|2469190_2470471_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_005901135.1\|2470467_2471142_+	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	1.5e-05	26.0
WP_060496802.1\|2471156_2471960_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_005898138.1\|2471974_2472487_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.9e-29	42.3
WP_060496803.1\|2472505_2474683_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
WP_060496804.1\|2474697_2475819_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.5e-92	49.0
WP_005901131.1\|2476056_2477388_+	magnesium transporter	NA	NA	NA	NA
WP_005901130.1\|2477412_2478000_+	hypothetical protein	NA	NA	NA	NA
WP_005901128.1\|2478038_2478389_+	hypothetical protein	NA	NA	NA	NA
WP_005901127.1\|2478506_2480069_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	3.8e-97	42.3
WP_060496805.1\|2480079_2481510_+	putative DNA binding domain-containing protein	A0A1B3AYT3	Gordonia_phage	8.4e-59	32.3
WP_060496806.1\|2481734_2483558_+	restriction endonuclease subunit S	E3T4D5	Cafeteria_roenbergensis_virus	2.6e-36	31.4
WP_060496807.1\|2483575_2486617_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.3e-24	23.4

DBSCAN-SWA_194

2493560 : 2494406

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005901114.1\|2493560_2494406_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-43	38.9

DBSCAN-SWA_195

2526089 : 2532772

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032887557.1\|2526089_2527811_-	NERD domain-containing protein	A0A1V0SET7	Hokovirus	1.5e-09	25.7
WP_187102923.1\|2527813_2532772_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.0e-74	23.0

DBSCAN-SWA_196

2536780 : 2538319

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496823.1\|2536780_2538319_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	6.8e-30	38.2

DBSCAN-SWA_197

2543523 : 2547074

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032834933.1\|2543523_2545323_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-44	30.2
WP_032887569.1\|2545334_2547074_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.9e-29	24.5

DBSCAN-SWA_198

2556179 : 2557675

Cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005901084.1\|2556179_2556962_+	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	4.5e-14	25.0
WP_005898801.1\|2556961_2557675_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.7e-18	28.4

DBSCAN-SWA_199

2575177 : 2576338

Clostridium_botulinum_C_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496836.1\|2575177_2576338_-\|transposase	transposase	Q331V1	Clostridium_botulinum_C_phage	1.9e-109	55.4

DBSCAN-SWA_200

2580892 : 2582428

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060496840.1\|2580892_2582428_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	3.0e-102	43.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013122

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP013121

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection