CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014140	Aneurinibacillus sp. XH2 chromosome, complete genome	6 crisprs	cas14k,cas14j,c2c10_CAS-V-U3,csa3,DEDDh,cas4,DinG,cas3,cas2,cas1,cas5,cas7,cas8b2,cas6	0	5	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014140_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_1

939095-939191

Orphan

Consensus_repeat	Method
ATCACCAATCATCATTTGGATATTAAAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014140_1

>merge|NZ_CP014140|1|939095-939191|CRISPRCasFinder
ATCACCAATCATCATTTGGATATTAAAATCGAGAGTACCTTGCGGACGACACGGGCGGGGATATCAAATCACCAATCATCATTTGGATATTAAAATC

>NZ_CP014140|1|1|939095-939191|CRISPRCasFinder
ATCACCAATCATCATTTGGATATTAAAATC	GAGAGTACCTTGCGGACGACACGGGCGGGGATATCAA
ATCACCAATCATCATTTGGATATTAAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_057897959.1\|930343_930991_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP014140.1\|WP_162264999.1\|939605_940226_-\|DUF1129-family-protein	unknown	unknown	gnl\|CDD\|181074
NZ_CP014140.1\|WP_057900241.1\|935903_936647_+\|heme-dependent-peroxidase	unknown	unknown	gnl\|CDD\|237033
NZ_CP014140.1\|WP_057897966.1\|938426_938795_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057897973.1\|945024_945846_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226953
NZ_CP014140.1\|WP_057897972.1\|944045_945047_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213234
NZ_CP014140.1\|WP_057900240.1\|930987_931914_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP014140.1\|WP_057897969.1\|941221_941551_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057897960.1\|931928_933233_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP014140.1\|WP_057897962.1\|934019_935828_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274573
NZ_CP014140.1\|WP_057897974.1\|945848_946661_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226218
NZ_CP014140.1\|WP_057897975.1\|946686_947694_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274922
NZ_CP014140.1\|WP_139184917.1\|937754_938000_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375595
NZ_CP014140.1\|WP_057897961.1\|933235_933871_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP014140.1\|WP_062731146.1\|939206_939425_-\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP014140.1\|WP_057897964.1\|937302_937743_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP014140.1\|WP_057897970.1\|942082_942829_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238430
NZ_CP014140.1\|WP_057897963.1\|936794_937208_+\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133403
NZ_CP014140.1\|WP_057897971.1\|942841_943975_+\|ketoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|238430
NZ_CP014140.1\|WP_057897968.1\|940263_940605_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_057897959.1\|930343_930991_+\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	3.54447e-63
NZ_CP014140.1\|WP_057897971.1\|942841_943975_+\|ketoacyl-ACP-synthase	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	9.47833e-72
NZ_CP014140.1\|WP_057900241.1\|935903_936647_+\|heme-dependent-peroxidase	gnl\|CDD\|237033	PRK12276, PRK12276, putative heme peroxidase; Provisional.	2.33066e-156
NZ_CP014140.1\|WP_057897962.1\|934019_935828_+\|hypothetical-protein	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	6.72239e-103
NZ_CP014140.1\|WP_057897973.1\|945024_945846_+\|hypothetical-protein	gnl\|CDD\|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.08213e-41
NZ_CP014140.1\|WP_057897972.1\|944045_945047_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	9.81518e-131
NZ_CP014140.1\|WP_057900240.1\|930987_931914_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.00263e-91
NZ_CP014140.1\|WP_057897960.1\|931928_933233_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.04578e-149
NZ_CP014140.1\|WP_162264999.1\|939605_940226_-\|DUF1129-family-protein	gnl\|CDD\|181074	PRK07668, PRK07668, hypothetical protein; Validated.	3.33127e-06
NZ_CP014140.1\|WP_057897974.1\|945848_946661_+\|ABC-transporter-permease	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.70555e-37
NZ_CP014140.1\|WP_057897975.1\|946686_947694_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274922	TIGR04020, non-ribosomal_peptide_synthetase, natural product biosynthesis luciferase-like monooxygenase domain. This model describes a subfamily within the bacterial luciferase-like monooxygenase (LLM) family that regularly occurs within large non-ribosomal protein synthases/polyketide synthases, but also as small proteins. The LLM family includes members that bind either FMN or F420, and FMN is more likely in this case because many members are from species that lack F420 biosynthesis capability. An example member is the MupA protein of mupirocin biosynthesis in Pseudomonas fluorescens NCIMB 10586.	2.66769e-115
NZ_CP014140.1\|WP_139184917.1\|937754_938000_+\|hypothetical-protein	gnl\|CDD\|375595	pfam18158, AidB_N, Adaptive response protein AidB N-terminal domain. This is the N-terminal domain of Adaptive response protein AidB present in E. coli. AidB is upregulated in response to small doses of DNA-methylating agents initiates a response that mitigates the mutagenic and cytotoxic effects of DNA methylation. Tetramer formation is thought to be carried out by the N-terminal domain.	1.15418e-20
NZ_CP014140.1\|WP_057897961.1\|933235_933871_+\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	2.0278e-138
NZ_CP014140.1\|WP_062731146.1\|939206_939425_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.34998e-06
NZ_CP014140.1\|WP_057897964.1\|937302_937743_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	3.01468e-26
NZ_CP014140.1\|WP_057897970.1\|942082_942829_+\|hypothetical-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	3.07484e-07
NZ_CP014140.1\|WP_057897963.1\|936794_937208_+\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|133403	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR. Putative helix-turn-helix (HTH) regulatory protein, GnyR, and other related proteins. GnyR belongs to the gnyRDBHAL cluster, which is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	3.1952e-42
NZ_CP014140.1\|WP_057897968.1\|940263_940605_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.74449e-23

>NZ_CP014140.1|WP_057897966.1|938426_938795_-|hypothetical-protein
MKQKQSSATHENQKMTVYAASNCQGKSGTESTWYGSIVYYNSCQANAIVGLLTSGTGATATAAALAAYHNKPVTALYTGVAAGLMTIGAGVVSAANAWGTGITIRYVDSYITSDLPFWVWAQ
>NZ_CP014140.1|WP_139184917.1|937754_938000_+|hypothetical-protein
MSVMIRETHTVTNQPKPLHPFNPLDIDLSLQDALAREKGAWGINQCREFAVLAGSEEALEHAERAARNQPRLHTHDRFGSK
>NZ_CP014140.1|WP_057897964.1|937302_937743_+|PaaI-family-thioesterase
MESNELFSIGQHALAAQSFSRLLGTKLMVFQPGEVVLELPVHEKLLQQNGFVHGGVLSYAADNALTFVGGSVLGPNVLTSEYKINYLRPAIGEKLVARGTVVYAGKLQAVCRCDVLVIKDGGEETLCATAQGTIVTIASEKSETGC
>NZ_CP014140.1|WP_057897963.1|936794_937208_+|MerR-family-DNA-binding-transcriptional-regulator
MKRQETYSISQLSSELDISTRTIRYYEERGLLHPTRSPGGTRRYTKADRARLKLILRGKRFGFSLDEIKEMLDLFYEDRLGVKQLERTIEYGVEKIKQVEEQIEELTVLRDELLSFKEAFEARLWELKRSNTENEGN
>NZ_CP014140.1|WP_057900241.1|935903_936647_+|heme-dependent-peroxidase
MSEAVNTLEGWFALHDFRSIDWAAWKSASEEERRAALEELIAFMHKWGDVEANKQGSSTMVSVVGHKADIAFMHLRPTLEELDALEAEFNKTQFAMYTIQTYSYVSVVELSSYVSQAENPEADPAIQARLKPILPKTKHICFYPMNKKREGNDNWYMLSMEERRAMMRSHGMIGRSYAGRVTQIITGSVGLDDWEWGVTLFADDPIVFKKLVYEMRFDEASARFGEFGTFIVGNRMTEERVNEYFAI
>NZ_CP014140.1|WP_057897962.1|934019_935828_+|hypothetical-protein
MSLNRKKRRMFIVLLLFTFLYTGIITRLAWIQVIATRSFSVHNVDLVERAVAQRREKIVLNTGRGMIYDRKGNPLTGDEQIGLAIFPLVRYSLGDSGKVGKLGQILGITKEEAGMLLSSVKHAGFWQDKDGNIISLREDQARQIRELNLSGVVPLPVTTRYPKNWLARHVIGYIGQNPKLIQEKYQEDVEAGVLKPTSKVGIAGLERTFQPFLMGVGETSVSYYVDGRGNPLNGLDVRLQKADNSFYPLTLVTTIDTTIQEQLEKAFDSSPVRKGAAVVLDVETKDVLAMVSRPNLDPSKANTASDAWRNRAIKQAIPGSIFKIVVAAAALEEGVVKPDDHFTCKGNLGKYGFSCWKKEGHGDITFEQAFAQSCNIAFAEIVKKVGPEKLQQYAVKLGLNQQIGWEKLPFYKLGKFRQFDSEDRGQVFAHDIPVKDEGILIQTGIGQRDVQLTPMQAANMAAIIASGGKKQKVRVVQSVNYQNGTTFYRFEDRPLDGADISPATASTLRKFMEDVVDQGTATILKRLPWKVAGKSGTAQTIVRDEPKNNHWFVGYVPREKPRYAIAVLVEEQPTTGMNQATKLFGSFITDLAQAEQEKYKQN
>NZ_CP014140.1|WP_057897961.1|933235_933871_+|uridine-kinase
MVTPVIIGVAGGTGSGKTTVAREIYRRFENMNVVMIEQDSYYKDQSHLTFEERTKTNYDHPMAFDTDLLIEHLKCLRRREPIEKPVYDYKRHTRAKEKVWIEPKDVIILEGILILEDERLRNLLDIKVFVDTDADVRIIRRILRDIEERGRTLESVVEQYLTVVRPMHMQFIEPTKRYADIIVPEGGQNRVAIDLLSTKIDTVLQSLSAGM
>NZ_CP014140.1|WP_057897960.1|931928_933233_+|U32-family-peptidase
MTEINVISDKKIVTPRRTILKKPEVLAPAGNLEKLKFAVRYGADAVYIGGQSLGLRANADNFSFDEMQAAVEFAHEHGAKVFVATNIIAHNEDLHQVDDFMRNLQRVGIDAIIVADPALIERTKQAAPDLELHLSTQASTTNWQTVQFWKDEGVSRVVLAREVSIREICEIKKHVDIEIEAFVHGAMCISYSGRCVLSNHFTARDSNRGGCSQSCRWQYDMFEELPKDDESMEQIGKKALPMFSENDPQFTMSSKDMCMLEFLPDMIEAGVDSFKIEGRMKSIHYVATVTNQYRRAVDAYCADPDNYKLNPEWMEEIRKASHRSLTTGFFYGVPTEKDQLYGENEEMPQYDFAGLVLDYDPETGIATLQQRNKFSVGDTVEFFGPTLDRFAQKVKEMWNEDGEEIASAPHAMQTIKLRVARPVSRYDMMRKEKK
>NZ_CP014140.1|WP_057900240.1|930987_931914_+|U32-family-peptidase
MKKPELLCTAADLDELVRVIDAGADAVSIGHERFGLRVAGNFELDDIRQATELAHGRKAKVYISVNALFHNDDLAELPGYLRALEDIGVDAIVFGDTAVLVTARQLGLKTPLHWNAEVLTTNYETINYWGSKGATRAFVARELNMDAIFEIKENADVEIQVQVHGMTCIFHSRRDLVSNYEKFKGQEAKSAGMDRRLFITEEKREDLHYPIYEDRNGTHIMSAEDICILEYLDELMEAEIDSFKIEGIMKDTDYNVKVVSIYRRAIDAYAESPDKFRDIVGGLMEELRAIQPADRELTTGFFFKEQVY
>NZ_CP014140.1|WP_057897959.1|930343_930991_+|O-methyltransferase
MITSNKVNRYMESLIPPRAELLMRMEREAAAERIPIIQLPSIQFIRFLLTMHKPKRILEVGMAIGYSTIWLAQAAPDAHITSIEISEEMVRRARQNFAEAGVSDRITVFHQDARDGLDGEPRFDCIFFDAAKGQYRTYFDTYVPYLVEGGLLICDNVFFRGMIAEADEDVPKSRRGMIKKLRAFNHFLAEHPALETSFVSIGDGLALCIKRGEVM
>NZ_CP014140.1|WP_062731146.1|939206_939425_-|transposase
MIHQQILSDLDVKHIPLALIDSTYDQQAKWGMSTRHKWYKGYKLHLATTPTGIILAQELTTANVYDSDAVSD
>NZ_CP014140.1|WP_162264999.1|939605_940226_-|DUF1129-family-protein
MNKKNKEYYEKMLIYLRLSPIPEKRTEELLLEILDHLLIAQQEGRSAEEVFGENPEAYCEELVQSMGKYSPYSIGRFLFIFGVGLYVGFLYDGIFRLLIDPLLHRFFNLPHKTGMDVSIFLFPMFMVFAVDLVMFFLRKSTFMKLGGRILWGYFLPLAFVYIVPLVIYYFFRDELPVIPLPAWMSLLIGVLLWIIHKALFKRVKVF
>NZ_CP014140.1|WP_057897968.1|940263_940605_-|PadR-family-transcriptional-regulator
MSSKSQLLKGVLEGCILAVIASEEVYGYELSVKLAKYGLSFVSEGSIYPVLLRMEKDKLIAGTLRDSPSGPKRKYYHLTEQGYKALGAFKEIWLDMKNSVDRILNLGSEKNDS
>NZ_CP014140.1|WP_057897969.1|941221_941551_-|hypothetical-protein
MKCNFLKIFLWIGFLFSLSYLIFDLIQTGEKKFITIFITLAFCVLLFLSNKVAENNNKVRVEWKYKEKRMKSSNIVVASANVKNPEFNYSYAFNRVGEIGVDEGVAKLK
>NZ_CP014140.1|WP_057897970.1|942082_942829_+|hypothetical-protein
MDRELITVVTGYHFFINKEQISSNKWFGKINDVTFTSTLTLKPFKIHQKLAPFLLQSVAYVVSLLEQRNLLPEPDRRGVIMNVPNAISIEIDSYLNAFHQPRRRIRPHQSLSIDSSSPTALVTLQFNFKGPSATLTDLYGGLSGLGWAYNLIKEDRTDLMLVVDIDRERSLTDNFVGSISVAALMKETSLGGIVPIGKLVDWSFRHPGNDSLYGSKLEQAMTWLESENSLPRFGYVDHDNWAICFTKS
>NZ_CP014140.1|WP_057897971.1|942841_943975_+|ketoacyl-ACP-synthase
MRVGIAGLGIVSPYGFGLESFSKGLFSGKSALTPLTRFDARGFRSQVGGQVDFQSDKLEESISKFWLNKALEEAMKQAECKIETWRSCKKAIILPVVSGDSSSTYGERAEIWVKDPLDFLPFAWRERTPVLRVSAACSSISSAIAMAKSLVSQEQLDMVMIARAELLNEYEYASLDIVKAISTDTARPFDQNRNGILVGEGAGVILLESEECLRDRGKKPLAWIDGISHIVSGYGTNMVELDKESTMQTMREALEEAKRKKVDCIQAHATGTPQGDLIEAVSIVEAIEEGNMIPVSSHKGAIGHLLRCSGVMGLATGVISLKCQAIPTTIGLINLDRACPIHAVIGRSMKATVESVLINSFGFCGNYVSMVVTSAKS
>NZ_CP014140.1|WP_057897972.1|944045_945047_+|ABC-transporter-ATP-binding-protein
MSFIHVSNLRKEYAYYRKEVGLLNSIKNLFHREKLVKEAVQKISFDIDEGEMIAFLGPNGAGKTTTLKILSGILHPTSGEATVMGYVPWERKKEFKMNFSIVMGQKSQLWWDLPANESLYLNKFIYEVEDREYQKTLDELTELLDVKDVLDVQVRRLSLGERMKLELVAALIHRPKVIFLDEPTIGLDLISQKSIRKFLKYYNEETKATIILTTHYMKDVEDLCKRVIIINQGKIAYDGNLNKVNELLNQKKLVKIQFSSPVPQTAVEAYGIVKEHNEFESLIELDREQLKQNSKLILEHLPVSDINVEDIPIEDSITILYKKDEKNEKVAQL
>NZ_CP014140.1|WP_057897973.1|945024_945846_+|hypothetical-protein
MRRLRSYRKYIHTFQLGIQSAVEYRANFVLGIVGSVFSITILTYLWTAIFNSQSPGSTVFGYTYREMITYTLIAAVTARIIQAGFEYDVAEDIKEGGLNKFIIRPIGYLPYKIYSFLGSKLIYIVVSFILIFIILFMLNRLIQVEIRPVNICYFLITLLLALVLNFFIFFCITTIAFWLENVSYIFEAPKILLVILSGGIFPLDVFSDTILSFLNYLPFKYTVNYPVDVLIGKYQGMELVRGVGIQVFWIVAFALISKLLWGIGIKKYIAIGG
>NZ_CP014140.1|WP_057897974.1|945848_946661_+|ABC-transporter-permease
MAWVREVKKLLKIYYLFGKNCMMAQMEYRFNFFVGVIVESGFVLSKLIYIFVIYQSGLIIEGLSRDSILLFSGTFMLVTGAYVSLFVVNFFKISEEYIQEGKLDLYITKPISLQFLTTMRYIDFGLAIPNLIVGSVLLVMGWVRLGIEVSFANIVGYALFLIGGIVISYTIMLIPHLFSFWFINTSSVNDLSNDIWEFGHMPARIYGKIIQTIGIYIIPLFLASNFGPLYLLNQLSTANIMWGIFAPLALLFLTRLLWKAAVRNYSSASS
>NZ_CP014140.1|WP_057897975.1|946686_947694_+|LLM-class-flavin-dependent-oxidoreductase
MKFSVSFFSNINDSVAQNMQNHYEFLFKVIQFAEEHDWYGVWFPERHYHTFGGLFPSPSVFAAAVARETKKLRIQVGSVILPLHSPIRIAEEWAMVDQLSKGRVSVSFASGWNPNDFIENPENFDNRKELMWEGMKRIENLWNDREKDITIFPKTYQKRIPIYVTVASSKKTCYEAGKRGYHLLTHFIFNDMNDVKQKIELYYAGLRDGGHSIKDKDVTILLHTYLDYDLKTVEQVVKNAFYEYQYAFLSLAEATPHYVSKREEEIAKTLMLRKYSPHYSLLGTPETCKTVLKKLEEIGVTQVAALIDFGLEKQKIMESLERLHLLVKGANVQTI

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Crispr_ID: NZ_CP014140_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_2

1684803-1684964

TypeV

Consensus_repeat	Method
GTTTGTAGCTTACCTATGAGGAATTGAAACT	PILER-CR
GTTTGTAGCTTACCTATGAGGAATTGAAAC	CRISPRCasFinder

2 spacers

cas14k

The CRISPR arrays of NZ_CP014140_2

>merge|NZ_CP014140|2|1684803-1684964|PILER-CR,CRISPRCasFinder
GTTTGTAGCTTACCTATGAGGAATTGAAACCAGATTCTTCTTGCGGCAGACGAAAAACCCGAAAAGTTTGTAGCTTACCTATGAGGAATTGAAACTCGTATACTTCGCCAATTCCGCGACCGCGCTCCCCGGTTTGTAGCTTACCTATGAGGAATTGAAACT

>NZ_CP014140|2|1|1684803-1684964|PILER-CR
GTTTGTAGCTTACCTATGAGGAATTGAAACC	AGATTCTTCTTGCGGCAGACGAAAAACCCGAAAA
GTTTGTAGCTTACCTATGAGGAATTGAAACT	CGTATACTTCGCCAATTCCGCGACCGCGCTCCCCG
GTTTGTAGCTTACCTATGAGGAATTGAAACT

>NZ_CP014140|2|2|1684803-1684963|CRISPRCasFinder
GTTTGTAGCTTACCTATGAGGAATTGAAAC	CAGATTCTTCTTGCGGCAGACGAAAAACCCGAAAA
GTTTGTAGCTTACCTATGAGGAATTGAAAC	TCGTATACTTCGCCAATTCCGCGACCGCGCTCCCCG
GTTTGTAGCTTACCTATGAGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_057898603.1\|1682804_1683197_+\|ArpU-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273725
NZ_CP014140.1\|WP_057898602.1\|1681900_1682266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898607.1\|1686378_1687440_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP014140.1\|WP_057898611.1\|1692260_1693385_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239434
NZ_CP014140.1\|WP_156423980.1\|1696831_1698016_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP014140.1\|WP_057898605.1\|1684038_1684308_+\|2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|379083
NZ_CP014140.1\|WP_162265014.1\|1680108_1680261_+\|transposase	cas14k	-	gnl\|CDD\|284650
NZ_CP014140.1\|WP_057898610.1\|1689969_1691736_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP014140.1\|WP_057898599.1\|1678345_1679656_-\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225827
NZ_CP014140.1\|WP_057898609.1\|1688985_1689309_-\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP014140.1\|WP_057898608.1\|1687812_1688862_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353
NZ_CP014140.1\|WP_057898598.1\|1677711_1678365_-\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP014140.1\|WP_057898612.1\|1693381_1694623_+\|Zn-dependent-hydrolase	unknown	unknown	gnl\|CDD\|236456
NZ_CP014140.1\|WP_057897355.1\|1696079_1696835_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP014140.1\|WP_139184912.1\|1680294_1680462_+\|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase	unknown	unknown	gnl\|CDD\|378175
NZ_CP014140.1\|WP_156424022.1\|1691732_1691903_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_082706174.1\|1680527_1680914_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP014140.1\|WP_057898604.1\|1683345_1683918_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374812
NZ_CP014140.1\|WP_057898601.1\|1681094_1681619_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898613.1\|1694643_1695960_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225330

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_057898603.1\|1682804_1683197_+\|ArpU-family-transcriptional-regulator	gnl\|CDD\|273725	TIGR01637, Putative_autolysin_regulatory_protein_ArpU, phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions].	1.3651e-15
NZ_CP014140.1\|WP_057898612.1\|1693381_1694623_+\|Zn-dependent-hydrolase	gnl\|CDD\|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	1.00565e-156
NZ_CP014140.1\|WP_057898607.1\|1686378_1687440_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	9.63957e-08
NZ_CP014140.1\|WP_156423980.1\|1696831_1698016_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30093e-54
NZ_CP014140.1\|WP_057898605.1\|1684038_1684308_+\|2TM-domain-containing-protein	gnl\|CDD\|379083	pfam13239, 2TM, 2TM domain. This short region contains two transmembrane alpha helices that are found associated with a wide range of other domains. This domain may be involved in cell lysis or peptidoglycan turnover.	1.45237e-27
NZ_CP014140.1\|WP_162265014.1\|1680108_1680261_+\|transposase	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	0.000130295
NZ_CP014140.1\|WP_057898610.1\|1689969_1691736_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP014140.1\|WP_057898599.1\|1678345_1679656_-\|GHKL-domain-containing-protein	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.30396e-24
NZ_CP014140.1\|WP_057898609.1\|1688985_1689309_-\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	6.85136e-29
NZ_CP014140.1\|WP_057898598.1\|1677711_1678365_-\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	3.13034e-17
NZ_CP014140.1\|WP_057897355.1\|1696079_1696835_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	1.00532e-86
NZ_CP014140.1\|WP_139184912.1\|1680294_1680462_+\|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase	gnl\|CDD\|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	1.15505e-08
NZ_CP014140.1\|WP_057898611.1\|1692260_1693385_+\|hypothetical-protein	gnl\|CDD\|239434	cd03318, MLE, Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.	1.61557e-93
NZ_CP014140.1\|WP_082706174.1\|1680527_1680914_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.75588e-19
NZ_CP014140.1\|WP_057898604.1\|1683345_1683918_+\|hypothetical-protein	gnl\|CDD\|374812	pfam16800, Endopep_inhib, IseA DL-endopeptidase inhibitor. This domain functions as a DL-endopeptidase inhibitor.	5.99462e-26
NZ_CP014140.1\|WP_057898608.1\|1687812_1688862_+\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.72874e-36
NZ_CP014140.1\|WP_057898613.1\|1694643_1695960_+\|hypothetical-protein	gnl\|CDD\|225330	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism].	1.25227e-08

>NZ_CP014140.1|WP_057898605.1|1684038_1684308_+|2TM-domain-containing-protein
MEKNEKYLRAKKRVKALKGFYIHLVVFILVNIGLFFIDLLFSRDSTWFYFPLFGWGIGLLAHGITVLGFGGLFGSEWEKKKIQEFMDKE
>NZ_CP014140.1|WP_057898604.1|1683345_1683918_+|hypothetical-protein
MKKQMLIGCLVVSCGLLSVNPVIAEPVAAAVTKQRAVDPTQIKAINEKNIISLIVEAKKRYFYADGGGKGKMEVFNVKNSEYRYLSSDIGTRKKLLDYLMKTFTKEASEAYIKKRFIEYKGRMAQVNADTGNILEFDKATAKLTKSSSTTKEYKLSIPYPDNQSKPEIKTIKVKKVNGVWRIATPPETLF
>NZ_CP014140.1|WP_057898603.1|1682804_1683197_+|ArpU-family-transcriptional-regulator
MQLSFLPKINRRATQRRVEEALKTARIYRQIGFVRREIEMTPAYEARYHGATNKTSDQVAEFATWNVDEEERVRRLTVRVERAVKRLPKRQRQIIEKRYLEDEDVFDYIVCTELGMSESTYGRQKAKAVY
>NZ_CP014140.1|WP_057898602.1|1681900_1682266_+|hypothetical-protein
MWSWIKKIFSLFGKKKQEDEQTEELAEPLTNDKKEENESQTLTDMEHKSGVVVYRKRLPKVPGRKKARKTPVHVIDKELLKLLDHRNDLSVESVSLSGSYSPKIPLRTHQIQLYNALKYIL
>NZ_CP014140.1|WP_057898601.1|1681094_1681619_+|hypothetical-protein
MSSILFIGIVAIFVFLLFKNSLMEKINVDYKMIQKMKHATWFQSHWRTGVFLFFINAVLFFLVGFILYLLAYFIIPFVHVIIMLLAVIVSVCFWMIISKSWQGSKANRFKVGLVGSSFYIILSLVFVYRLMTLKPSYPVEDTFMESIGLIFGIIVTMVAFITCFIIIAFPKSNN
>NZ_CP014140.1|WP_082706174.1|1680527_1680914_-|tyrosine-type-recombinase/integrase
MAKHGVRTLAEVVRQTGLSRTMLTAVCYSRGKGIPFDTMDALCEMFGVGIGELPVIRFHDLRHTHATILLQLSENPKIVSERLGHVNITITLDTYSHILPDMQKNLAQNFDVAMKNPVKRNTKSALVD
>NZ_CP014140.1|WP_139184912.1|1680294_1680462_+|Spo0E-family-sporulation-regulatory-protein-aspartic-acid-phosphatase
MCAIEEAREELNRVASVRKLTDPAVIAMSKKLDKLINQYYSYKIKQKNTPERGNA
>NZ_CP014140.1|WP_162265014.1|1680108_1680261_+|transposase
MFVDKSYSIQTCPVCKRRKKGFTRNYRCHCGYTSHRDITFTVINKSIYRC
>NZ_CP014140.1|WP_057898599.1|1678345_1679656_-|GHKL-domain-containing-protein
MNLLMFFLYSIPEEFLIVALCITLAGYNISACKLRYIIVSLLLAISVKALQLLDLSLPLRSFFQFVILIILVKQGMGIPLLPLITCSVITLLVLQMNELLVMSIFTNFYDKTLQEIQMEPLLWFARTLPNLLLMSLFLYIIKKYKIFFFKENIPSNKLTFRSYWIFSAFYTFGIIGAITLEQGDIGPGYILVCIVIFQAFSLLVIQELVKSNRHETQLAVYKESIKNMTSLFTTIRSQRHDFANHIQVLYILAKQKEHEKLLRYIEQLVGQITSINEVLLSDNPELSALLQTKIAQFAQEKIRLRLHLTSSLTELEIPVIELNQIIGNLLDNAADAIKAADYPSDEILLETIKINNKVQIKVKNYRPIIPIYLQKKIFEYGFSTKQNHSGLGLAIVTSLVEKNKGTLCLISNEKVGTEFTITFPVKELKKIEQKTG
>NZ_CP014140.1|WP_057898598.1|1677711_1678365_-|accessory-gene-regulator-B-family-protein
MSKKLADTIALALIKHSDTRHPLPVLSYGLQILINTLIKIVMITIIGWVLHILLELYIMIFFFGSFRMITGGVHAHTFFKCLTISLVSFVLLILLSSYTLPFFIENKFIILLSLFLFGTMITWLYVPARWGNRRFSKKRITVSKWLSISYLALILLSVWCIPAHSTINKLQEISWIAVMGITWQCILVTPWGYALFDRIERITLLKGGDNNVAKNEG
>NZ_CP014140.1|WP_057898607.1|1686378_1687440_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MKKAWAILSILVTMLILGSVEAYASVASPLTIQVNGSTVATPPGIHVVNGQVMVPIRWAAEQLGARSIKWDPKTRDIFIQTEDVTDKIAKLASYNRALETYEASKEAEMWPLTENAKKAWLFLQNQPLFHRDHELVLNLPDSSLKRVISITVNREYVSYAVNSAENHNGHFYIPMDWLEQLFWADVQYNKETNQLFIQAPNKAEIEQQLAAVEDALVASTPEEAMKLWGRGEQTRSGALQYAVLSPELRKKAEERVREKNWTTGGSSPWVGPITVKEEKKLSETAVEYTVTYPEITSFGSTLGTEKFIIEKLTVDGKEGWFITRLLYANPYYSIIPGETQPIEEEIKWSPLPE
>NZ_CP014140.1|WP_057898608.1|1687812_1688862_+|hypothetical-protein
MKTKKTGIKQLVMTGLFSVSLTSGFAPFFSGTAEASRNFTDVSNVSWAVPSIYNLYEKGIVKGTTANTFSPNKKITRAEFAAILSRAIEKEENIHTFPFIDVAESSWYYKPVKKAYQMGIVKGVSDTRFAPERPITREEAAVIIAHTFNYSHSDRQLPYLDKAKVSNWAIDSVQAVAQRQVFLGDDGYFNPQKELTRAEAAVILQKALFGSVPKTEPVRQVASRTDSRLDELVMRKVEPLLGTPYRWGGTTPKGFDCSGFTQYVYKSLGVDLPRTTSQQFEKGTSVSLKNMQPGDLLFFDTGDGKISHVGIYVGQGRMAHAASGQGEVKINDIDWYLSHYKVVGVKRYL
>NZ_CP014140.1|WP_057898609.1|1688985_1689309_-|multidrug-efflux-SMR-transporter
MHWIYLILAIGFEVAGTTCMKLAQGFTKILPSIMMGIFYVASLSFLTISLKKIDVSLAYAIWSGLGTAIIAIIGVFLFKESLTAAKITGIIFIILGVVLLNLYGEAH
>NZ_CP014140.1|WP_057898610.1|1689969_1691736_+|phosphomethylpyrimidine-synthase-ThiC
MEQVRNLTVEKFPNSKKVYVEGSRPDIRVPVREIALSPSKSGEALQENKPVRVYDTSGPYTDETYSVNIREGLPKIRRTWIEERGDVEEYEGRKVKPEDNGFRSSVDRAVQEEFPGYTRRPLRAKKGKNVTQLHYARRGIITPEMEFVAIRENMAPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFHVKINANIGNSVVTSSIEEEVEKMTWAIRWGADTIMDLSTGKNIHTIREWIIRNSPVPVGTVPIYQALEKVGGKAEELTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMKTYDVAFSLGDGLRPGSIADANDEAQFAELETLGELTKIAWEHDVQVMVEGPGHVPMHKIKENMDKQLEICQEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTSMLCYVTPKEHLGLPNKEDVRQGVVTYKIAAHAADLAKGHPGAQVRDDALSKARFEFRWYDQFNLSLDPERAREYHDETLPAEGAKNAHFCSMCGPKFCSMRITQDIRAYAESKGLDMQDALSEGMKEKAREFRESGSEIYR
>NZ_CP014140.1|WP_156424022.1|1691732_1691903_+|hypothetical-protein
MKQVKEIENRIAVLSREILLLKKQLRTIQDTCKHDFKEDAYVRTCKKCGFSEALYY
>NZ_CP014140.1|WP_057898611.1|1692260_1693385_+|hypothetical-protein
MTNRIKKIVTHIVEVPLKNKWQISLYSANIRQHAIVEVILENGIHGFGEAAPSPAFMGETAETIKLVNDLYLAPALIGLPVDEIAVAHTKMNQVIYAQTAAKSAIDIALHDAWGKTLNQPLYKLMGGEARKTVPLTYVVGIKNNEDAYEEAIRRVNEGFNVIKIKVGNEPKRDITLVNLIRKAISDSGKEAKIRLDANQGYDVPTAIKVIKELEETGEIESVEQPVRKWNIFGIKEIREKVKTPIMIDETVFSPEDAMNAIKLGIADIINLKVCKVGGIYQSRKIAALAEAAGMSCTVGSNLELGIGIAASAQFVTSTPVVKNPSDFICGAYLHEYDITETPMMDLVENGAMKVSDKPGLGIDVNISLLGRESK
>NZ_CP014140.1|WP_057898612.1|1693381_1694623_+|Zn-dependent-hydrolase
MNISIERLQNDLEKYARYGKDPNNGITRPSFSEADFEVRDLFINELKQLGLEVKVDGASNIWGLMKGNGRKKGTIVIGSHLDTVPNGGKYDGALGVLVAKEIIRTLKDHNIMLNHDLEIVSFTAEEPNDFNVSTMGSRSFTGKLLPEHLMDVTDSKGTRLADCFQKAGGGLEYFSEMAQAKKDKKAFIELHIEQGKRLEQQNISVASVDKIVGIYRDQVTVIGQANHAGTTMMEHRFDALTAAAEMVLIAEKLGREDAKDTVCTVGKFNVFPNAANIIPGKVEFILEVRGETEEDIQRLVANIKAEWKKIRKARQVDVKEQNILNQKPVHLDMDIVACIEKAAQERHVPIVRLASMAGHDASHMADISKTAMIFVKSINGKSHCPQEYSTPDDIEIASNVMLQAILNVDEQLD
>NZ_CP014140.1|WP_057898613.1|1694643_1695960_+|hypothetical-protein
MIHSPSLWGLVPLIVFIILIFRKWNPIAAISGAIIVGAVMSGASLMDVAKVIGKNGLTDFIAYIGLVILAGGGLGKIAEKTGVARNIVYFIMNKVGINTPNKAMISTMIASSLLAALLGTLAGANAIVAPVLIPVVAAAGLSSSVVAIIFHGAAAAGILIGPFTPPVVTLMELTGLTYPQVLLHAGLPVAIIIWLCTFVYSKMILKKSLIEHSYPEEDLSGFNQKELEVELKQKKITTQATVAFLVTLIASIVYGIMIKGGSTYTIVVILLTAIITGLAGRMSPNQIADTFVEGAKPLLWIFIQFVLFTPFIYFTEKMGGFEALKNLLLPYVENGGQATMVILSTIVNIAGIPGAAVAHSILMHKMFIPTVMDLHIPMSVWVLALLVGSQMPFFLYPTGDALGAMGLARSKDLKNVIIFGVFVTIIVVLFIVIRVLFL
>NZ_CP014140.1|WP_057897355.1|1696079_1696835_-|ATP-binding-protein
MMEKIEEYCQRLNLPTICDMWSEAAEQAAKNNVPYSAFLFSLLEAEIAQKHQRTTETLLKLAKLPFRKTLDEFDFSVQTSVDERRIRELMTLSFLKHKENLIFLGPPGIGKTHLAVSIALEAIGQGHKVYFITAQELISQLRKADQEGKLEKKLRTFVKPSLLIVDEMGYMHLEHGSAHYLFQVISRRYERGSIIMTSNKSFGEWGEVLGDPVIATAMLDRLLHHSRIFNMKGESYRLREKKAASRKQKGS
>NZ_CP014140.1|WP_156423980.1|1696831_1698016_-|IS21-family-transposase
MIKELYRKGMSISDIARQLGIDRKTVRKYLGENSPPLKKKRTSRGSKLDRYKDYLHKRMIEDGVFNSEKLYGEIQSLGYTGGRTILKDYIKPFRDTHRAKYTVRYETLPGEQMQVDWKEIGTVILHGEPVKLTMFVAVLGYSRMKYAEVTTSQDQEHLMQCLIHSFKYFGGVPQHILFDNMKTVTDGREQGVVKWNERFAEFASYYSFTPKACKPYRAQTKGKVERAIQYIINSFYVGTSYDSVEDLNQQLLRWLDRVGNRKKNDTTGVSPQERWAEEKLQPILQKADYDTSYRSYRKTHFDGTFSYRGVKWIVDPEYSQKEILVKESLDGQVTAYYQGVRISCKQLHENVIFLPQKQNEKQDIGVGRSQPASHFEVHTRSLSEYDELTGGEMS

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Crispr_ID: NZ_CP014140_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_3

1750499-1751850

Orphan

Consensus_repeat	Method
GTTTGTAGCTTACCTATAAGGAATTGAAAC	PILER-CR
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CRISPRCasFinder
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CRT

20 spacers

The CRISPR arrays of NZ_CP014140_3

>merge|NZ_CP014140|3|1750499-1751850|PILER-CR,CRISPRCasFinder,CRT
GTTTGTAGCTTACCTATAAGGAATTGAAACTCAGATCATGTCTGAATGAACGGGCGGGGTCTTGAGTTTGTAGCTTACCTATAAGGAATTGAAACTCATTCGTGGAAGCTGTACGTGCCCTCTATTGAAAGAAGTTTGTAGCTTACCTATAAGGAATTGAAACTCAAATAGTGCAAAGGCTGAAGCGTTGGCATTGCCGTTTGTAGCTTACCTATAAGGAATTGAAACTGCGGCTATAGATGCTTACGAAAAGGAGCCAGAGTTGTTTGTAGCTTACCTATAAGGAATTGAAACAGGAATACAAACATGTACAAGATGGGATTTGCTTCACGTTTGTAGCTTACCTATAAGGAATTGAAACATTTCTGTTTGAAGTTTTAAAATAGTCTCTTCTTGTGTTTGTAGCTTACCTATAAGGAATTGAAACATCGAATCCGCGTCTATGTCTATGATATAGGTATCGGTTTGTAGCTTACCTATAAGGAATTGAAACCAAATAGCAATATCTTCGCCATCGCTGCCTTCTCCGTTTGTAGCTTACCTATAAGGAATTGAAACCGGAATGTACGCCGTTGGCGGAAAACGTCATGGCATGTTTGTAGCTTACCTATAAGGAATTGAAACAGGCGTTCTACAACAGTATTTTCAATCACTACAAAAGTTTGTAGCTTACCTATAAGGAATTGAAACCAAAGTAGATAATGTCTTCAATCGTGATTGTCGGGAGTTTGTAGCTTACCTATAAGGAATTGAAACTCAGGATTGGCGTGAATGAACGCCATAGTGGACGCAGTTTGTAGCTTACCTATAAGGAATTGAAACTTAAATCATGATTGAATGAGCGGGCGGGGTCTTGAGTTTGTAGCTTACCTATAAGGAATTGAAACAAAAAGCGGATCGCCTTCCGAATTCCCCATGTCGCTGGTTTGTAGCTTACCTATAAGGAATTGAAACCAAGTTTTTCCGGTCTGGTTTAGTTTGGTCTTTGGTCTGTTTGTAGCTTACCTATAAGGAATTGAAACTTAGCGTACTGCCCCACAATGTCGCGGGCATGTCGTTTGTAGCTTACCTATAAGGAATTGAAACTGCGGCAATACACTAATGAAGATCCTATATTCTTCAGTTTGTAGCTTACCTATAAGGAATTGAAACGAATACCACTTGAAATATATTCCCGCCCACATTATAATGTTTGTAGCTTACCTATAAGGAATTGAAACTTGGCAATTATCAACCTGAGCCAGAAAAAACAGATAGTTTGTAGCTTACCTATGAGGAATTGAAACCCGAAATAGTAGGCGGTACAGCACCGACGAAGCCGGGTTTGTAGCTTACCTATGAGGAATTGAAAC

>NZ_CP014140|3|2|1750499-1751850|PILER-CR
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGATCATGTCTGAATGAACGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCATTCGTGGAAGCTGTACGTGCCCTCTATTGAAAGAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAAATAGTGCAAAGGCTGAAGCGTTGGCATTGCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCTATAGATGCTTACGAAAAGGAGCCAGAGTT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGAATACAAACATGTACAAGATGGGATTTGCTTCAC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATTTCTGTTTGAAGTTTTAAAATAGTCTCTTCTTGT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATCGAATCCGCGTCTATGTCTATGATATAGGTATCG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAATAGCAATATCTTCGCCATCGCTGCCTTCTCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CGGAATGTACGCCGTTGGCGGAAAACGTCATGGCAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGCGTTCTACAACAGTATTTTCAATCACTACAAAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAAGTAGATAATGTCTTCAATCGTGATTGTCGGGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGGATTGGCGTGAATGAACGCCATAGTGGACGCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAAATCATGATTGAATGAGCGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AAAAAGCGGATCGCCTTCCGAATTCCCCATGTCGCTG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAGTTTTTCCGGTCTGGTTTAGTTTGGTCTTTGGTCT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAGCGTACTGCCCCACAATGTCGCGGGCATGTC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCAATACACTAATGAAGATCCTATATTCTTCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	GAATACCACTTGAAATATATTCCCGCCCACATTATAAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTGGCAATTATCAACCTGAGCCAGAAAAAACAGATA
GTTTGTAGCTTACCTATGAGGAATTGAAAC	CCGAAATAGTAGGCGGTACAGCACCGACGAAGCCGG
GTTTGTAGCTTACCTATGAGGAATTGAAAC

>NZ_CP014140|3|3|1750499-1751850|CRISPRCasFinder
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGATCATGTCTGAATGAACGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCATTCGTGGAAGCTGTACGTGCCCTCTATTGAAAGAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAAATAGTGCAAAGGCTGAAGCGTTGGCATTGCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCTATAGATGCTTACGAAAAGGAGCCAGAGTT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGAATACAAACATGTACAAGATGGGATTTGCTTCAC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATTTCTGTTTGAAGTTTTAAAATAGTCTCTTCTTGT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATCGAATCCGCGTCTATGTCTATGATATAGGTATCG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAATAGCAATATCTTCGCCATCGCTGCCTTCTCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CGGAATGTACGCCGTTGGCGGAAAACGTCATGGCAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGCGTTCTACAACAGTATTTTCAATCACTACAAAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAAGTAGATAATGTCTTCAATCGTGATTGTCGGGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGGATTGGCGTGAATGAACGCCATAGTGGACGCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAAATCATGATTGAATGAGCGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AAAAAGCGGATCGCCTTCCGAATTCCCCATGTCGCTG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAGTTTTTCCGGTCTGGTTTAGTTTGGTCTTTGGTCT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAGCGTACTGCCCCACAATGTCGCGGGCATGTC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCAATACACTAATGAAGATCCTATATTCTTCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	GAATACCACTTGAAATATATTCCCGCCCACATTATAAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTGGCAATTATCAACCTGAGCCAGAAAAAACAGATA
GTTTGTAGCTTACCTATGAGGAATTGAAAC	CCGAAATAGTAGGCGGTACAGCACCGACGAAGCCGG
GTTTGTAGCTTACCTATGAGGAATTGAAAC

>NZ_CP014140|3|1|1750499-1751850|CRT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGATCATGTCTGAATGAACGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCATTCGTGGAAGCTGTACGTGCCCTCTATTGAAAGAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAAATAGTGCAAAGGCTGAAGCGTTGGCATTGCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCTATAGATGCTTACGAAAAGGAGCCAGAGTT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGAATACAAACATGTACAAGATGGGATTTGCTTCAC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATTTCTGTTTGAAGTTTTAAAATAGTCTCTTCTTGT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	ATCGAATCCGCGTCTATGTCTATGATATAGGTATCG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAATAGCAATATCTTCGCCATCGCTGCCTTCTCC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CGGAATGTACGCCGTTGGCGGAAAACGTCATGGCAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AGGCGTTCTACAACAGTATTTTCAATCACTACAAAA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAAGTAGATAATGTCTTCAATCGTGATTGTCGGGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TCAGGATTGGCGTGAATGAACGCCATAGTGGACGCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAAATCATGATTGAATGAGCGGGCGGGGTCTTGA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	AAAAAGCGGATCGCCTTCCGAATTCCCCATGTCGCTG
GTTTGTAGCTTACCTATAAGGAATTGAAAC	CAAGTTTTTCCGGTCTGGTTTAGTTTGGTCTTTGGTCT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTAGCGTACTGCCCCACAATGTCGCGGGCATGTC
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TGCGGCAATACACTAATGAAGATCCTATATTCTTCA
GTTTGTAGCTTACCTATAAGGAATTGAAAC	GAATACCACTTGAAATATATTCCCGCCCACATTATAAT
GTTTGTAGCTTACCTATAAGGAATTGAAAC	TTGGCAATTATCAACCTGAGCCAGAAAAAACAGATA
GTTTGTAGCTTACCTATGAGGAATTGAAAC	CCGAAATAGTAGGCGGTACAGCACCGACGAAGCCGG
GTTTGTAGCTTACCTATGAGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_082705961.1\|1759321_1760098_+\|LamB/YcsF-family-protein	unknown	unknown	gnl\|CDD\|377121
NZ_CP014140.1\|WP_057898684.1\|1757954_1759295_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|180406
NZ_CP014140.1\|WP_057898683.1\|1757641_1757887_+\|biotin-carboxyl-carrier-domain-containing-protein	unknown	unknown	gnl\|CDD\|180811
NZ_CP014140.1\|WP_057898672.1\|1745552_1746635_+\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP014140.1\|WP_162265017.1\|1746657_1747182_+\|DUF2313-domain-containing-protein	unknown	unknown	gnl\|CDD\|378379
NZ_CP014140.1\|WP_082705960.1\|1749460_1750264_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350620
NZ_CP014140.1\|WP_057898686.1\|1762298_1763183_+\|carboxyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214820
NZ_CP014140.1\|WP_057898675.1\|1747683_1748397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898680.1\|1753257_1755477_+\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP014140.1\|WP_156424016.1\|1748768_1748906_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898671.1\|1745095_1745566_+\|DUF2634-domain-containing-protein	unknown	unknown	gnl\|CDD\|378510
NZ_CP014140.1\|WP_057898681.1\|1755786_1756656_+\|carboxyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214820
NZ_CP014140.1\|WP_057898674.1\|1747174_1747684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898682.1\|1756652_1757636_+\|biotin-dependent-carboxyltransferase	unknown	unknown	gnl\|CDD\|214821
NZ_CP014140.1\|WP_057898677.1\|1748976_1749402_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377457
NZ_CP014140.1\|WP_057898676.1\|1748410_1748767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057898679.1\|1752587_1753280_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP014140.1\|WP_057898670.1\|1744655_1745099_+\|DUF2577-domain-containing-protein	unknown	unknown	gnl\|CDD\|378501
NZ_CP014140.1\|WP_057898685.1\|1760217_1762284_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP014140.1\|WP_057898687.1\|1763183_1764167_+\|biotin-dependent-carboxyltransferase	unknown	unknown	gnl\|CDD\|214821

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_082705961.1\|1759321_1760098_+\|LamB/YcsF-family-protein	gnl\|CDD\|377121	pfam03746, LamB_YcsF, LamB/YcsF family. This family includes LamB. The lam locus of Aspergillus nidulans consists of two divergently transcribed genes, lamA and lamB, involved in the utilisation of lactams such as 2-pyrrolidinone. Both genes are under the control of the positive regulatory gene amdR and are subject to carbon and nitrogen metabolite repression. The exact molecular function of the proteins in this family is unknown.	1.57257e-131
NZ_CP014140.1\|WP_057898684.1\|1757954_1759295_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|180406	PRK06111, PRK06111, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP014140.1\|WP_057898683.1\|1757641_1757887_+\|biotin-carboxyl-carrier-domain-containing-protein	gnl\|CDD\|180811	PRK07051, PRK07051, biotin carboxyl carrier domain-containing protein.	9.86977e-32
NZ_CP014140.1\|WP_057898672.1\|1745552_1746635_+\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.80301e-58
NZ_CP014140.1\|WP_082705960.1\|1749460_1750264_+\|hypothetical-protein	gnl\|CDD\|350620	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	4.2914e-46
NZ_CP014140.1\|WP_057898686.1\|1762298_1763183_+\|carboxyltransferase-domain-containing-protein	gnl\|CDD\|214820	smart00796, AHS1, Allophanate hydrolase subunit 1. This domain represents subunit 1 of allophanate hydrolase (AHS1).	7.35068e-51
NZ_CP014140.1\|WP_057898687.1\|1763183_1764167_+\|biotin-dependent-carboxyltransferase	gnl\|CDD\|214821	smart00797, AHS2, Allophanate hydrolase subunit 2. This domain represents subunit 2 of allophanate hydrolase (AHS2).	7.19831e-113
NZ_CP014140.1\|WP_162265017.1\|1746657_1747182_+\|DUF2313-domain-containing-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	1.68211e-35
NZ_CP014140.1\|WP_057898681.1\|1755786_1756656_+\|carboxyltransferase-domain-containing-protein	gnl\|CDD\|214820	smart00796, AHS1, Allophanate hydrolase subunit 1. This domain represents subunit 1 of allophanate hydrolase (AHS1).	4.58536e-55
NZ_CP014140.1\|WP_057898682.1\|1756652_1757636_+\|biotin-dependent-carboxyltransferase	gnl\|CDD\|214821	smart00797, AHS2, Allophanate hydrolase subunit 2. This domain represents subunit 2 of allophanate hydrolase (AHS2).	1.53026e-128
NZ_CP014140.1\|WP_057898677.1\|1748976_1749402_+\|phage-holin-family-protein	gnl\|CDD\|377457	pfam05105, Phage_holin_4_1, Bacteriophage holin family. Phage holins and lytic enzymes are both necessary for bacterial lysis and virus dissemination. This family also includes TcdE/UtxA involved in toxin secretion in Clostridium difficile. The 1.E.10 family is represented by Bacillus subtilis phi29 holin; 1.E.16 represents the Cph1 holin; and the 1.E.19 family is represented by the Clostridium difficile TcdE holin. Toxigenic strains of C. difficile produce two large toxins (TcdA and TcdB) encoded within a pathogenicity locus. tcdE, encoded between tcdA and tcdB, encodes a 166 aa protein which causes death to E. coli when expressed, and the structure of TcdE resembles holins. TcdE acts on the bacterial membrane. Since TcdA and TcdB lack signal peptides, they may be released via TcdE either prior to or subsequent to cell lysis.	5.58546e-37
NZ_CP014140.1\|WP_057898671.1\|1745095_1745566_+\|DUF2634-domain-containing-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	7.4416e-23
NZ_CP014140.1\|WP_057898679.1\|1752587_1753280_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.91786e-79
NZ_CP014140.1\|WP_057898680.1\|1753257_1755477_+\|GHKL-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.37073e-42
NZ_CP014140.1\|WP_057898685.1\|1760217_1762284_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	1.43297e-157
NZ_CP014140.1\|WP_057898670.1\|1744655_1745099_+\|DUF2577-domain-containing-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	1.36763e-17

>NZ_CP014140.1|WP_082705960.1|1749460_1750264_+|hypothetical-protein
MDMAIAWDWLKQKNFRLNDPNLHPVVAQRGWEVVFEAWQRGIYVLITQGYRSIAEQNELYAQGRTKPGKIVTNAKGGTSYHNYGLALDFALYTPDGKQVVWDMNTDFNKNHKKDWMEVVQMFKARGFEWGGDWRSFKDYPHVQMTFGFSIAQLKAGKRPSRPAMVVQVPELKKVVASVTDKKEEEYMIPVSKADKIIALIQAEWKEKDEQIKQYQKMWQEENAKPDKCQQKLDEYHRAAEALRKDKKELGELADEVRKASGRRAANN
>NZ_CP014140.1|WP_057898677.1|1748976_1749402_+|phage-holin-family-protein
MRQETDTFYTFVVGGGAASAAFLLGGFDRLVVALAICMAADYLSGVLVGFFREKKISSERAFHGLLKKGAMILLVIVSHQLDVVAGSTDSQFMRNAMIMFLIAVEGISLVENMGRLGVPVPAFLRQRFEQMKNDNDKEAKF
>NZ_CP014140.1|WP_156424016.1|1748768_1748906_+|hypothetical-protein
MEYIYAYRIYYGKMTIEQVPACKKEATIAVLQNEYGYTVEQQTTT
>NZ_CP014140.1|WP_057898676.1|1748410_1748767_+|hypothetical-protein
MRYYRIALIEGKPDVSFMKINRIVYDGETAVVSTNEELERFESELTQAEWESFLAERIPSKTDEPEMRKPEPQEAATDAIIAGIAEMYAQQTQVMNTLMAGMADLYVQIEALKNGGTV
>NZ_CP014140.1|WP_057898675.1|1747683_1748397_+|hypothetical-protein
MDAVTLSQVLEQLKRTGKNTDAAGNTTLFAYLKQINDYVDTLETKVADLKYHLGNITDLANRNGSLQSKVVDIRNVLDTSVAKWPTTKRLHVNPADTAGVWQWLFDSGVGTKGKLQTFRFLLSSFKSSDRIDFQIWVDGYLISHVKLSGDSNYPNAIGFSTPEILTIAAGYDTGGGGGYAFHHYGGPHGGLESFSYASGTFHPNILLHLPWNNRIEIKYLITGSISFEEAIIVYEQA
>NZ_CP014140.1|WP_057898674.1|1747174_1747684_+|hypothetical-protein
MASNTPNLGLYMKDPVTDGNHTFNIETMLNENWRKIDEKVVLKEEGKGLSTNDYTDADKQKLANMQEGSINQDTADARYLQAGSTNQDVTFSKSIIQQTDTRSVFLTYTNGDLTKVEEKDGTTVVKTTDLTYSSGKLTQVVETVGGKTITQTLNYDESGNLQSVTRSVV
>NZ_CP014140.1|WP_162265017.1|1746657_1747182_+|DUF2313-domain-containing-protein
MPPRYHKDPLTNEIKNAEAIELDRIAAKRQDVFAQFDPETATWGIANWEKIFGIPIDENKPLQERRELVIAKMRFSETVTVATIKNVASAWLGGEVDVEEDYQNFAIIVTFIGKIGVPKNLDDIKKTLRELIPAHLGITYKFRYLLIREIHNVLTLNEMETLTLDKFAGGEIIG
>NZ_CP014140.1|WP_057898672.1|1745552_1746635_+|baseplate-J/gp47-family-protein
MEMDDLVLIPDFEVEEIDDIHNRMLSNINDRYDKTEGNIPFDVTRATAIDIQKEQIATQNMYYNGFLNASMDLLYMKLWARRVGVDWKPAVESQNLVTFKGADGVLIPAGTVLQFIEDDVLEFVSLEDGTITDGQVDILVKCSVGGVVGNIPANSLQLAERIEGITSIEHTAFTNGVDEESKESLLKRTLEKARNPGISGNAAHYRQWAMSRVGVADAKVYPVWDGNNSVKVVLLDENGKAPAQNIIDDVAQYIETVKPAGPIITVVGVTEVAIDISAKVVPTSYSDVDTIKQQFIPAAADYLKQLSFKDPLVRWTRIANILGDIPDVIDYSDLTINSGTANIEIPDGSVAVLGTVNFYE
>NZ_CP014140.1|WP_057898671.1|1745095_1745566_+|DUF2634-domain-containing-protein
MIPEMPNPDDFLQEVEQEQQLDIDLGVGFLFDYEKGEFVIRNGRLVELTDIEAVKMWIIHILRTEKYQYEIYANYPDTPEYEYGTLTEFCIGRVLTDDMRVQLQENIEASATRHPRVAFLSEWKFEKDEDKLTVYFRVNLVDGQSFEMGVPLGGNG
>NZ_CP014140.1|WP_057898670.1|1744655_1745099_+|DUF2577-domain-containing-protein
MQGMTPERFAVWMADEVKKRDNPVFIGVQIGIVSKPFPDIEIKLGEAIVLDKSQLIFGRDVLRHKRTINIKSSTTSLSLSKDEGATSQELSGAYKHAHDISVSNGQFSISESEIEFVDELRPGDEVILLPAQDQQLYYVLDKAVRLE
>NZ_CP014140.1|WP_057898679.1|1752587_1753280_+|response-regulator-transcription-factor
MNHYSILVVDDEKEIRDGIEIYLKNEGMTVIKAKDGIEAIEKLNEHVIHLIILDIMMPRLDGIATTFKIREEKNIPIIILSAKSEDMDKILGLQVGADDYVTKPFNPLELIARVKSQLRRYVTLGTYEGIEKVIHLNGLTLDQSAKEVTVDGEVVKLTPTEYKIVELLMTNAGRVFSINEIYERVWKEPGFNAENTVAVHIRKIREKIEINPKQPKYLKVVWGIGYKIEK
>NZ_CP014140.1|WP_057898680.1|1753257_1755477_+|GHKL-domain-containing-protein
MDTKSKSKMIFVIWILLFTFGLSGIISGLFNGKDYIKKDYFQTQQFEDELNQFVDYLKMFELNNINKEELKKKITVTAEEIEEHRYRYGDLSTQVSNIKGQYEHKIQDALLAGNKEVADAYIAERDKKIEDITNNFKSDEHVRAKIVKEKEQKIDEYFREIENYRSDFMRYKALFTYYLKNTATGEVYTNVNISSGDSIDTFINNKNMIFIQSYPSSKYAYLSTGGQYRFVGDNDVVTPLIEKETSTFEGKIALPKAASSENPILADYYDFQQKQKIFFIYTISGILAFLLSFYLNKKTRVIQCIPTGKWQPYYNCIPIDVTVMALVFTGLLTLLLFIMDNTLSLHQNLYIYIRDTLFRLIVTTLFVALTLIQGKFLLERAKAPANLKADWQKALLHRAYQGIKEAFLIRSIGMQLFILLSVVFAFGVGAAIVLIEPIYIWIYIPLFIVICVPIFIIIIKRSGYFNRIVTNTDELVHGNFEQDIPVIGKSALAVLAANINALKHGIKVSQKEQAKSERLKTELITNVSHDLRTPLTSIITYTELLKTSDVTDEERDAYIEIIDRKSKRLKVLIDDLFEASKMASGNIELEKEKVDLVQLLQQALAEYNETIEESTLQFRITTPDTPVYAVVDGQKLWRVFDNLIGNILKYSLENTRVYISVKKANDKAVIAFKNITKYELSEDIDELFERFKRGDTSRHTEGSGLGLAIAKSIIDLHEGSLDIEVDGDLFKVTVSLNTK
>NZ_CP014140.1|WP_057898681.1|1755786_1756656_+|carboxyltransferase-domain-containing-protein
MVRYEYGGDEFVFVELAEEMSLEVNFQAMAITRKLREKQLPGILDICPSNASYMIRVDPDQLHPDVLIKELKDLEHSVSIDDFEISARIVDVPILFEDPWTHEALMRFRDRHQDPNSTDLEYAARINGFASKEELIQAITDYPYLVSMVGFVPGLPWCYQMVPREQQIEVPKYVRPRTYTPERAFGFGGAFAVIYPVQGAGGYQLFGIAAAPIYDKEQRLPDFADSMTFPRQGDIFRYRSVTKEEFESIREQVEAGTFRYLTTEITFTPHDVIENPKQFSENVLGRLYV
>NZ_CP014140.1|WP_057898682.1|1756652_1757636_+|biotin-dependent-carboxyltransferase
MIKVITPGLQTTVQDQGRIGYYEIGMPPSGAMDKYSYVIANLLVGNDENAAALEITYMGPTLEFQRDSVIAVTGGEIPPKINGQPAPMWETIAVKAGDQLSFDFIRQGARAYLAVAGGINVPVIMDSRSTYTLCGIGGFEGRALQAGDGLCIGSDIRRKISAGTRIPETFIPRFSKSYEIRVLMGLCSYRLTEESKERFLSLDWTVTPEANRVGYRFKGERLNFVPREQPFGAGSNPSNVVDLGYPIGSIQVPDGVEPIALLNDAVTGGGYATIATIISADLNRMAQIKTNEKVRFVSVSLEEALRARREMKDKIAQIKQVISENGR
>NZ_CP014140.1|WP_057898683.1|1757641_1757887_+|biotin-carboxyl-carrier-domain-containing-protein
MAESKSILSPIPGVFYRRPAPDQDVYVKEGDTVKVGDTIGLIEVMKNFYEIKAESDGVLERFCVENEEIVDAGQEIAVIKR
>NZ_CP014140.1|WP_057898684.1|1757954_1759295_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MSYFDKILIANRGEIARRIIRTCKRLKIRTVAVYSEADMDAPFVEEADEAVCIGPAQVKKSYLDIEKVIQVAKETEANAIHPGYGFLSENPRFVRRCEEEGIVFIGPDARTIELMGSKIEARRQMQQAGVPVVPGWDGKIDSVTEALSIADQLGYPLMLKASAGGGGIGMQVIHNPDELQKAFASTMQRAQSYFGDGTLFLEKWISGPRHIEVQVACDAYGHAVHLFERECSVQRRNQKVVEESPSPFLDEETRAKLLETALRGARHIGYSNVGTMEFIFDENRNFYFLEMNTRLQVEHPVTEEITGLDLVELQIRLAAKEKLPFQQEEIRKTGHAIECRLYAEDPKTFFPSPGVLKRLALPKEEVRLDFGVIEGSTVTPFYDPMIGKIITHGRDRSDAIHKMEKALEQIAVEGLTTNVSLLQKIVQDKDFRDGHYTTRFLEKLLV
>NZ_CP014140.1|WP_082705961.1|1759321_1760098_+|LamB/YcsF-family-protein
MHKVDLNCDMGESFGLYELGNDEEMMQYITSANIACGFHGGDPHVMRKTVELAKRYGVGIGAHPAFPDLLGFGRRYMTCTAAEVKDYVTYQLGALREFAVAANIKIQHCKPHGALYMKAMEDKALARAILEAIAEVDPQTVIFALNNSAVLEEAKKMGIPVAREAYADREHTTTGSIILTRKGSQIKDYHEMAQRVVRMVKEGKVMTHDGEEIAIQADTICIHGDTPGASQLAKTIVEALRENGVQIAPIREVLNVGC
>NZ_CP014140.1|WP_057898685.1|1760217_1762284_+|sigma-54-interacting-transcriptional-regulator
MITWKQILRPISAVVNRESTIQDVLREMHERGADIAFVMDKGNIVGFIHTDSLLEQLRHTPDLQQPIQYRKDILKVPYMHPVEYYHNISVVLGVNPGGEIIGYSLVQQARHQMNELQLRHMNQILDGAGVGIIRTNTRFEIEFINETAENILGLSRSFLLSRNYKTLLTMDKDLDRVIQGETFISVNSSINFKQISGNFSPLRIDGRITGLVHVFFLREAFEEAVQELEFVRNLYSDLQAVYSSSHEQILVVNPKGEVIRLAGTFLQEFWGLDQPEKVIGRNVAEFERKGVFRPNIVDLCIKKKKKLTMIQDTVHGRKVWSVATPVYHEGKLEKVVVLSRDITKTNQLQEELKRVTKKSNTYKQELDQLMNRYSADKPLIYRSRIMEDLVEEVKRIAQVDSTVLLEGESGVGKEVFARTLHAASRRKDYPLIRVNCGAIPENLIESELFGYEKGAFTGADQKGKPGLFEMAHRGTIFLDEISELSLNMQVKLLRVLQEKEVTRIGGVQTIPVDVRVIAATNKNIKDMMEQGEFREDLYYRLNVIPIHIPPLRERTEDIFSLVLYFSQQFNRTYQMEKGFSPGALEVLENYDWPGNVRELQNIVERLIVTSREEFIQREDVLRVLYGEAGGKRKKTMVFELMPLKEAVAELESQLIQLGLKKYGTAAKVSEVLGVSPATISRRMNKLFK
>NZ_CP014140.1|WP_057898686.1|1762298_1763183_+|carboxyltransferase-domain-containing-protein
MFTLPETRFDFGGDEYIYAEISRDMSAESNFKALAIVNELRKRNIPGIIEIVPSNASYLVRYNPEIIPARDLLDYLKDIDITKSNPAELNLSVRMVEIPVWYDDPITREYSRRFKSRHQEPDISNFEFAMKVNGFREKEAFIEAHTRMPYLITMVGFLPGTAWGFPLGLHPQEIIQVPKYLSPRTDTPRQAVGVGGAFTVVYPVNGPGSYQLIGISAVPVYDNEKRLVDLEDTYFLARPGDIWKYRSVDEREYSRIVEEVKQGTYRYRMKYIEFSPQEYVTKGKVYILELMEGF
>NZ_CP014140.1|WP_057898687.1|1763183_1764167_+|biotin-dependent-carboxyltransferase
MLRILEPGLWTTVQDIGRQGYYHFGLPPSGAADKYSFMVGNLLLGNPLEFAGLEMTLLGPKVEFLKKTVIAITGAPMEAYLNQQPIPLWEPVQVNEGDILSFKFCKQGVKSYLCVSGGIQVPEVLGSRSTYTLSRLGGFQGRKLDVGDELEIGEPLPGAFKQVGKRPPSEFIPEYKNFQDLRVVMGLSGHRVSDEGIKAFLNSEWTVSTESNQVAYRYTGAKIAFKEHEPPFGAGDGFSNVVDFAYPIGALMVPNEEELIILLNDATSGGGFVTIGTVISTDLDIVAQSRPMSKCRFLAITVDQAMQVRLERKKKLTRLAELLKEHG

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Crispr_ID: NZ_CP014140_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_4

3126037-3126133

Orphan

Consensus_repeat	Method
AGGTCATAATTATATATGCACTATACTGGTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014140_4

>merge|NZ_CP014140|4|3126037-3126133|CRISPRCasFinder
AGGTCATAATTATATATGCACTATACTGGTAGAATGTCTAAATGCAAAGGGCAGCCCAGATAAACAGGTCATAATTATATATGCACTATACTGGTAG

>NZ_CP014140|4|4|3126037-3126133|CRISPRCasFinder
AGGTCATAATTATATATGCACTATACTGGTAG	AATGTCTAAATGCAAAGGGCAGCCCAGATAAAC
AGGTCATAATTATATATGCACTATACTGGTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_057899823.1\|3120101_3121457_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|235885
NZ_CP014140.1\|WP_057899826.1\|3124944_3125478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899819.1\|3115214_3115988_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|235711
NZ_CP014140.1\|WP_057899828.1\|3126318_3127944_+\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_CP014140.1\|WP_057899822.1\|3118277_3119678_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP014140.1\|WP_057899824.1\|3121490_3122927_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143467
NZ_CP014140.1\|WP_057899825.1\|3124627_3124885_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899830.1\|3129217_3130414_+\|Ger(x)C-family-spore-germination-protein	unknown	unknown	gnl\|CDD\|274338
NZ_CP014140.1\|WP_057900427.1\|3136394_3137603_-\|butyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NZ_CP014140.1\|WP_057899820.1\|3116339_3117530_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP014140.1\|WP_057899833.1\|3133365_3133644_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899836.1\|3137633_3138875_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP014140.1\|WP_057899834.1\|3134220_3134712_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|224104
NZ_CP014140.1\|WP_082706101.1\|3122970_3124626_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP014140.1\|WP_057899827.1\|3125489_3125672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899832.1\|3132069_3133350_+\|ArsB/NhaD-family-transporter	unknown	unknown	gnl\|CDD\|238536
NZ_CP014140.1\|WP_057899835.1\|3134906_3136334_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP014140.1\|WP_057899821.1\|3117533_3118262_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP014140.1\|WP_057899831.1\|3130755_3131901_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP014140.1\|WP_057899829.1\|3128087_3129221_+\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_057899823.1\|3120101_3121457_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|235885	PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.	0
NZ_CP014140.1\|WP_057899824.1\|3121490_3122927_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143467	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.	0
NZ_CP014140.1\|WP_057899819.1\|3115214_3115988_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|235711	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase.	4.63014e-138
NZ_CP014140.1\|WP_057899828.1\|3126318_3127944_+\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP014140.1\|WP_057899822.1\|3118277_3119678_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.5655e-32
NZ_CP014140.1\|WP_057899830.1\|3129217_3130414_+\|Ger(x)C-family-spore-germination-protein	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	2.14821e-63
NZ_CP014140.1\|WP_057900427.1\|3136394_3137603_-\|butyryl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.45954e-165
NZ_CP014140.1\|WP_057899820.1\|3116339_3117530_-\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	1.06836e-67
NZ_CP014140.1\|WP_057899836.1\|3137633_3138875_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	1.03388e-177
NZ_CP014140.1\|WP_057899834.1\|3134220_3134712_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	2.5611e-36
NZ_CP014140.1\|WP_082706101.1\|3122970_3124626_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	8.80574e-169
NZ_CP014140.1\|WP_057899832.1\|3132069_3133350_+\|ArsB/NhaD-family-transporter	gnl\|CDD\|238536	cd01116, P_permease, Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.	1.32805e-140
NZ_CP014140.1\|WP_057899835.1\|3134906_3136334_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0
NZ_CP014140.1\|WP_057899821.1\|3117533_3118262_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.81744e-119
NZ_CP014140.1\|WP_057899831.1\|3130755_3131901_-\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	1.1032e-168
NZ_CP014140.1\|WP_057899829.1\|3128087_3129221_+\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	8.58673e-50

>NZ_CP014140.1|WP_057899827.1|3125489_3125672_-|hypothetical-protein
MIMMFITGVIILVVFFGAIITAIVQTARGKWKVDYDALAAKNAVEDEARRKARKLRQKQV
>NZ_CP014140.1|WP_057899826.1|3124944_3125478_-|hypothetical-protein
MFDPTIYENIKVALEGAIYDFDFAGEILVTSRSDTVELASMSRTYTIGFSERHKKAEKGTTALLILSADAADLVGEILELPESEGRKFGCTLRVQFVMEITDIARCRRIEEELNAIWSHRPLIMQELAFRYEPLELDEPALYRNTITLDFGRKINEDNIGDIYNIVEHTVHSLRRLD
>NZ_CP014140.1|WP_057899825.1|3124627_3124885_+|hypothetical-protein
MLVTLYGTQTSETMDIHLDHPHTVGAILEILLTIHPWFFQALPPGRDKSTLAEALLIRDADNTALTVDDIVTNDTKLEIQFHNTI
>NZ_CP014140.1|WP_082706101.1|3122970_3124626_+|sigma-54-interacting-transcriptional-regulator
MDSNIHIAPFLDTFSIGFCYVREEYFEYNKLIEKWFFQKDWTPVRLSECLRKWAADGEFFQRTDGFLWKGKILAETGGFTWLVFPWENAESHIATEYENLYAELKSVFAAAYDEIFVTDGEGYTVRVNGACERNYGLKAEQMVGKHVTELVAGGIFSPSATLDVIAQRKQINLVQQTLNGRKLLVTATPVFTQDGKLIRVVSNSRDITELLHLREQLDQLQERVETYEETLKQHEEASGMILSVRSPAMLKVLSKIEKVAKVDSTVLFLGESGVGKTHLARYLHNMSPRKHAPFLSVNCSAFPEALIESELFGYERGAFSGAHEKGKKGLFEAANGGTLFLDEIGELPLPMQAKLLNVLQEKQFFRIGGTTPIQVDVRIIAATNQDLKKKVEEKTFRNDLYYRLNVIPITIPPLRERKEDIVPLAIQFLEEFKDMYGIEKKLSHAAAEELRRANWPGNIRELRNFLERLVVTIDEDTITTKHIATALRDEDETMTEQEHENLSLKKRLELYEGQIIRRMYEECGSTYKLAEKLGISQSSAMRKVNKYVKEL
>NZ_CP014140.1|WP_057899824.1|3121490_3122927_+|aldehyde-dehydrogenase-family-protein
MNQTIPKKPLYIAGGAKEASSYKQLRSPHTGEVIAEVAIGTREDMKAAIDHAEEAAKVMAKMPAHKRAAILQNVSLLLKERKEEAARILALEAAKPIAVARGEIARTIETYQFSADEARRIHGETIPMDASAMGENRIAYTVRQPLGIVGAITPFNFPFNLVAHKLGPAFAAGNAVILKPADQTPLSAYFIADLFAEAGLPAGALQVIPGPGSEVGDELVCDDRVKIITFTGSPEVGKTIRAKAGLKRVVLELGSNSGLIIDEGFDIEPIIKRTVTGAFTFMGQVCISLQRIYVHRSLYDSFVEKFVAETKKLRIGDPLDETTDIAALISQKDVERIASWIEEAETLGAKVLTGGTEGNIVKPTVIVDVPPHAKVSCQETFAPVVVISPFDTFDEAIEAVNDSRYGLQAGIYTNNMEHAFEAAERLEVGGVMINDFPTFRVDHMPYGGVKESGVGREGIKYATEEMTEMKLVCFNRNK
>NZ_CP014140.1|WP_057899823.1|3120101_3121457_+|4-aminobutyrate--2-oxoglutarate-transaminase
MGYKFAHVKTELPGPKAKEILERRKQYVPKGISNGIPTFVEKAQGAILTDVDGNTYIDFAGAIGTINVGHCTPEVVEALHDQVDKYIHTGFNVMMYEPYIELAERLAKLAPGDHEKQVMFLNSGAEAVENAVKIARKYTKRQGVVVFSRGFHGRTLLTMSMTSKVKPYKFEFGPFAPEIYKAPYHYAYRRPEGMSVEQYDEHVLNEFKNFLLGDVAPETIAAVVMEPVQGEGGFIVPSKKFVQGVAELCKQYGIVFVADEIQTGFSRTGKYFAVEHFDVVPDLITISKSMGAGLPISGVIGRKEIMEMSNPGELGGTYSGSPLGCRAALAVLDVIEKYNLNERGRVIGEKVMKRFAKLAEKYDIIGDVRGLGAMCAMEFVKDKQTKEPNKEVVGTIVNEANKRGLITLSAGLYGNVLRVLMPLVITDEQLEEGLDILEESIAAATSALQVH
>NZ_CP014140.1|WP_057899822.1|3118277_3119678_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MRKKIWIGVITGVIAIGGYIVYSAYVPRSVEGTPVSLATVVQKDMESRIMTTGKVKMEQEMTVYAGASGKIVALHAAEGAPVKKGQILGEIYTEDIKNQLIDIDSQLIDMDEQARDVDNQVADTSAQIAEKKAELAKLQAANDAIEIAKAENGIRQAEQELEQAKREYARIKTLVESGAEKKQELDKASDQIKQAEFKLKTSQYELAEKKKGPKREEVTALLVSIAQLEEKKKRTATKKESIASKKQKIEEKRQQLLAQRNDALIVAPIDGTVLTQKAKAGEYTTKGNELLKVGTTQNIYVEAEIAEADIGKVRVGQKAKLEGGALGKQVAEAHVVSISPVAIEAATQKSGQQSERAKVAVKLALDKPNELLRPGFRIDVTIVHQSAKQALQVPIEAVQKNGGKAFVWINENGLAKKKAVVTGMENELFAEVKQGLKAGTKVITNPGPQLKENEPVMEANVPGEAR
>NZ_CP014140.1|WP_057899821.1|3117533_3118262_-|ABC-transporter-ATP-binding-protein
MVKVENMSKVYRTGGGDIYAMKNVFVTVEKGEFVAIMGPSGSGKSTFMNMIGCLDRPTSGLYHLDGMEVTNLSDKQLAHVRNQKIGFVFQTFHLLPRSTALRNVELPLIYAGVGRKERTERARAALARVGLGERMNHIPNQLSGGQRQRVAIARALVNEPAIVLADEPTGALDSRTSIEIMDIFQQLNEQGTTIILVTHEPDIACYAKRLIRFRDGQVVADDPVRDRLFASQQLASERQQEV
>NZ_CP014140.1|WP_057899820.1|3116339_3117530_-|FtsX-like-permease-family-protein
MRLLESLSMALDGLRANKLRSFLTMLGIIIGIASVIAVMTLGKGGESAVVQQVSKFGQNKFMVYTRYDTEEPEDPNALTLEDAEYLPQVSPYISAAVANSYVGNTELYWLNKKKTVEVRATTAQLPAVQPTLHMVQGRFFTDEDDKNRRPVIVLEDGAAQELFGTENPIGQRVRFNDRSVVVIGVFKQEKVSFDFSKAKSAFVPFRFANELSENQTVSNIEMTAISKEALRPAMKQVKDYLNRKHNHKDYYEVLSMEDNIKEFSQMTGMITLIFSIVAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGAQRKDILLQFLLESMILSLIGGLIGALLGIGISAIGFSYANIPLLISWETVLLAFSVSSSIGIFFGLYPANKAAKLNPIEALRYE
>NZ_CP014140.1|WP_057899819.1|3115214_3115988_-|uroporphyrinogen-III-C-methyltransferase
MVAGKVYLVGAGPGDPKLITVRGLELLQRADVIVYDRLASPKLLDYAKKEAECIYCGKETNHHSLSQTEINEIIVAKAVQGKEVVRLKGGDPFVFGRGGEEAEACIAAGIDYEVVPGITSGIAAPAYAGIPITHRGYSSSVAFVTGHKAVEKEQSGIQWEKLATAVDTLVFYMGVGNLPEIVKNLHKYGRAKETPVALIRWGTCENQETLIGTLETIVEQVQQARFRSPAVIVVGEVVRLREQLAWYEQQLRQVIIA
>NZ_CP014140.1|WP_057899828.1|3126318_3127944_+|spore-germination-protein
MKMSQLWRKKARKSKQWLSQEKAAISSIPLQPLHTSLEKNVQDITEQLGQNTDFTSHHLICAGRRVALFFFQSLVDIQHLSEYVILPLQERWDKDASEKGLLLSEEKAKHELLQIIQRQIVATTETQRIMDWQAAIQQMLDGKALLIVDGEATGLAVGVERVEKRNIANPDTEQSVIGPKESFIEDLDTNITLIRQRLRDPKLTIEVINITKRGKHKVCIFYLEDVANPSIIEEVKRRLFAIDTDIIQGQMHLQELIEDNSFSLFPELRPTERPDVVCSYLLEGNVVVMTGNSSHALILPITFFQLLDTVDDYYSSWQYATLIRFVRMLALLFSIVIPGLYLSLTAFNPELIPTRLVISMDAARTKVALPILMEIFVMEIMIEILREAGVKLPKPIGQAVSIIGGLVIGEAAVNANLVSPVTIVIIALTTISSFTAPVYLLGITYRILRFFVLFCSSILGLYGLILGLFFIHAHTARLVSFGVPYLAPLSPLRIADWKDTLVRFPFKKLTKRPSFLNPLQRSKSKPLPMISRKQHKKENKR
>NZ_CP014140.1|WP_057899829.1|3128087_3129221_+|GerAB/ArcD/ProY-family-transporter
MMSGNEVRPSLTPVQLVFLIFGVIIGTGFITLPRGVMEKAREDAWLTIILAIGFCFFSLWLILRIARVFPGDTVIEYNVKLFGRTVGLLFNLSLAGYYLFFTITGIRVMAEVVRSEMLPFTPIEVIIGSMLLILLYSSWDGLMPIVRIHESGIPSSIFMLVFFLMLAYLEADWYELRVPFLDGMTSVIQSLPNTVYSFLGYEILFLYYPFIAKKEKAYLHTAIGIGVSGIFYIFVVLGALVTLGPDVTIAQTYPVITMAKTIEIVRQFIERAELLLIILWLPLAYTTHLVTFFSTAFALNRTFPRISLRWWMVLSLPLIFVLSLVPENLIEMEGWLNVVGAIGLFLLIGYPLLLLTCVFVRRKLGLLPSPEQKGDSV
>NZ_CP014140.1|WP_057899830.1|3129217_3130414_+|Ger(x)C-family-spore-germination-protein
MKKWKRSFISAITLISFAAILLTGCWDYRELERRAIIVGLGIEELPPERFAGKEMRMYQVIVQVVEAASASGQMGMGTQTGQQPKGYTNFIFKTPSIANGIEQITTQSDRFPILSHLQMIAVGEKVSEKGLNELFDFFSRFPQMRRHTEIIMTTGPITEYFTIPSVSEPTPSLHIAEITDSVQKTLIMPESNLGTVSKSVRSNTPFFLLTASINKRKQIVINQATVFQNFKKMGILSKNDIQNLSILHGEIERGVLNFPCYAGKKVGLQILKGKNNIRPTMKNNRPHITFQIELDTELMEYQCLGASFDKPNQLERAERIYSDILEKRLHKTIETLKKKYKADVFRLTTRLKNHPDMYKQIRKQPKTFFEQLTIDVNVDLKIRNIGDSLKTPHYKLKK
>NZ_CP014140.1|WP_057899831.1|3130755_3131901_-|glycerate-kinase
MKFLLAPDSFKGSVSAKEAAEAMRRGVLKARPSARTFTLPLSDGGEGTLEHLVKATKGTIYETMIEDPLGRPICGYYGVTGDGKTAIVELATASGLTLLKKEELNPRLASTFGTGQLIMRAMERGIASFIICLGGSATVDGGAGILQALGFRLLDHCGEELPRGGVYLRELAHIDDSRVDEGIKQAKFRLACDVTNPLLGPQGAAYVFGPQKGADKEAIRELGEALTVWADQIRHKTGVAVHDMPGAGAAGGTAAGLCGLLGAEIRPGFAIVSEMLGLERLLDEHSITAVLTGEGRLDAQTAGGKVVAGVCAVCAGRGIPVIAVVGGIDGDISPLYGRGLTAAFSLVDGPLSVEEAMGRATVLLEKQTEQIVRVFVKAKGM
>NZ_CP014140.1|WP_057899832.1|3132069_3133350_+|ArsB/NhaD-family-transporter
MEQQALIAIGIFLVTYGLIISEKIHRTIVAMLGGALMVALGIVNQETAIHHIDFNTLGLLTGMMIIVAITAQTGLFKFIAIWAAKKVNGDPIKILIALSIITAVGSAFLDNVTTVLLMVPVTFSITRQLRISPIPYLIAEIFTANIGGTATMIGDPPNIMIGSAVKELTFVAFINNLALISAFILIVTVAILALLYRKQIQTTEELKAGLMDMREQDEITDPALLKKCLAILTLTIAGFFVHQIVHIESATIALLGAFILLLLTGEHYLEDALTKVEWTTIFFFVGLFVLVSGLVETGVIAQLANKAIELTKGDLVATSLLILWMSAIASAFVDNIPFVATMIPMIQEMGRMGVSDLEPLWWSLALGACLGGNGSLIGASANLIVAGMASKEGYHISFLKFLWIGFPLMILSIIISTVYIYVRYLM
>NZ_CP014140.1|WP_057899833.1|3133365_3133644_+|hypothetical-protein
MISYQYDTNALTIEEQKNELDTEFILKVKDVDGIIPSLRKVRAFFDQDKVYTDVIFYPHPNHEYQIIVRQDYYIDFLLALFKNKIIHTLEWS
>NZ_CP014140.1|WP_057899834.1|3134220_3134712_+|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MMSSIRRSIPNSFTLSNLVCGIFSLTFSMNGYYKMAALLILLAALCDVFDGKLARMLKVDSPMGVELDSLADIVSFGVAPAILIHTMHTPSPLLTIAFIAFPIAGAWRLGRFNIKPTVGYYMGVPITLAGLILAVLALFSFSSPLLMLILAVLMVSPIRIPKL
>NZ_CP014140.1|WP_057899835.1|3134906_3136334_+|amino-acid-permease
MKQKQHHELHRGLEERHIALMSLGAAIGVGLFLGSSSAIKLAGPAILLAYALAGAGMFIIMRALGEMAIQNPVAGSFSRYARDYLGPIAGYLTGWNYWFLWVVTCMAEITAVGVYMQFWFPNTDQWVWALAALVIMAAVNLIAVKAYGELEFWFALIKIVTIILMIIVGLGMVIFGIGNGGVATGISNLWSHGGFLPNGINGVLMSMQMVLFAFLGIEMIGVTAGEVKNPEKSLARAIDSVFWRILLFYVGALFVILSIYPWDEIGTKGSPFVMTFDKLGIPYAAGIINFVVLTAALSSCNSGIFSTGRMLFNLAQQGEAPQKFKNISRSGVPNIAILASAGALLIGVTLNYIVPEKVFQWVTSIGTFGAIWTWAIILLAQIRYRKSLSVEQVQNLKYKMPLFPFSSYVTLAFLISVVGLMAYFPDTRIALIVGPAWYLILIIFYFAKGLHKRKITKQAKEEENHKQSVKPSYQR
>NZ_CP014140.1|WP_057900427.1|3136394_3137603_-|butyryl-CoA-dehydrogenase
MNFALTEEQEAVRKMVRSFVDKEIKPYIQEWDAKGHFERSIMTRLADLDLMGVCIPEEYGGSGMDYNTLAIVCEELERGDTAFRTAVSVHTGLNSMTLLQWGSEEQKQKYLVPQAKGEKIGAFGLTEPNAGSDVAAMQTTAVRDGDYYILNGQKTWISLCDIADHFLVFAYTDKSKKHRGISCFIVERTFEGFASKAIKGKLGIRAGNTGEIFFDNMRVPAENLLGEEGEGFKIAMSALDNGRFTVAAGACGLIQACLEESLKYCHERGTFGKEIGKHQLVQQMIAKMVDGLETSRLLVYRAGWLKNQGKRNTRETSLAKWHACDAAFEAACDAVQIHGAYGYSNEYPVERFMRNAKAPVIYEGTREIHTIMQAEYALGYRQDKPLRKMLPAWPFTEEAVEV
>NZ_CP014140.1|WP_057899836.1|3137633_3138875_-|CoA-transferase
MITSSSNREDVADSFEPYSRGALDGIKVIDLTRVLAGPYCTMILGDLGADVIKIEAPGGSDETRGWGPPNIGGESAYYLCTNRNKRALTLDLKNLKARDILRELLKDADVVINNFKTGTMEKWGLGYETMAELNPRLIYVSISGFGQTGPYKHVPGYDYIVQAMGGMMSITGSEETGPMKVGVAIADVATGLYAAIGILAALRERDHSGMGQMIDLALFDSQISLLVNVASNYLVSGQIPKRYGNQHPNIVPYQTFAASDMEMVVAVGNDQQFRRLCVLLGKEEWSRDPKFATNSARLVHREEICELLQEEFKKRPASEWLVRLTDVGVPNAPIYNLAQLFEDPQVQARKMKVEISHPTAGKVSMVGSPLKLSRTPVSIRRHPPLVGEHTKEILLAHGFTEEQIDEWFQDKII

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Crispr_ID: NZ_CP014140_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_5

3202203-3202892

Unclear

I-A

Consensus_repeat	Method
ATTTATATCCCACTACGTTCATATAAAAC	CRISPRCasFinder
ATTTATATCCCACTACGTTCATATAAAAC	CRT
ATTTATATCCCACTACGTTCATATAAAAC	PILER-CR

10 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP014140_5

>merge|NZ_CP014140|5|3202203-3202892|CRISPRCasFinder,CRT,PILER-CR
CTTTATATCCCACTACGTTCATATAAAACTAAAGGTTGTGCACTATCTAATAGATAGTGTGGATGTAATTTATATCCCACTACGTTCATATAAAACTTGGCTTTTTCGCCCGGAATAAGGTGTCACAAATTTTATTTATATCCCACTACGTTCATATAAAACAACCCAGCGTTTTCCTTCTTTTACGCCCGCAACAAAATTTATATCCCACTACGTTCATATAAAACATAATATCGCGTCCAATTTGATGCAAGTTAATGCCGATTTATATCCCACTACGTTCATATAAAACCTTTCGGGCTCTATCGTTTCCATGCCCGCTACGGAACCATTTATATCCCACTACGTTCATATAAAACTTGAAACTGGGCGAGCATCCGAAAATCGTTTCTGAAATTTATATCCCACTACGTTCATATAAAACCACGTAGAAAAGACAACCCCCACCCAGGAGGGTAAGTAATTTATATCCCACTACGTTCATATAAAACTCTTCTTCCGCCTGGATACCGCCGTTGATTACATCCCAATTTATATCCCACTACGTTCATATAAAACCATCACCTTCCGTGGTATACTGGTAACAGCTCCCGAATGATTTATATCCCACTACGTTCATATAAAACGTAAGAAAGCGGACGGAACGCTTGAACGATGGGACATTTATATCCCACTACGTTCATATAAAAC

>NZ_CP014140|5|5|3202203-3202892|CRISPRCasFinder
CTTTATATCCCACTACGTTCATATAAAAC	TAAAGGTTGTGCACTATCTAATAGATAGTGTGGATGTA
ATTTATATCCCACTACGTTCATATAAAAC	TTGGCTTTTTCGCCCGGAATAAGGTGTCACAAATTTT
ATTTATATCCCACTACGTTCATATAAAAC	AACCCAGCGTTTTCCTTCTTTTACGCCCGCAACAAA
ATTTATATCCCACTACGTTCATATAAAAC	ATAATATCGCGTCCAATTTGATGCAAGTTAATGCCG
ATTTATATCCCACTACGTTCATATAAAAC	CTTTCGGGCTCTATCGTTTCCATGCCCGCTACGGAACC
ATTTATATCCCACTACGTTCATATAAAAC	TTGAAACTGGGCGAGCATCCGAAAATCGTTTCTGAA
ATTTATATCCCACTACGTTCATATAAAAC	CACGTAGAAAAGACAACCCCCACCCAGGAGGGTAAGTA
ATTTATATCCCACTACGTTCATATAAAAC	TCTTCTTCCGCCTGGATACCGCCGTTGATTACATCCCA
ATTTATATCCCACTACGTTCATATAAAAC	CATCACCTTCCGTGGTATACTGGTAACAGCTCCCGAATG
ATTTATATCCCACTACGTTCATATAAAAC	GTAAGAAAGCGGACGGAACGCTTGAACGATGGGAC
ATTTATATCCCACTACGTTCATATAAAAC

>NZ_CP014140|5|2|3202203-3202892|CRT
CTTTATATCCCACTACGTTCATATAAAAC	TAAAGGTTGTGCACTATCTAATAGATAGTGTGGATGTA
ATTTATATCCCACTACGTTCATATAAAAC	TTGGCTTTTTCGCCCGGAATAAGGTGTCACAAATTTT
ATTTATATCCCACTACGTTCATATAAAAC	AACCCAGCGTTTTCCTTCTTTTACGCCCGCAACAAA
ATTTATATCCCACTACGTTCATATAAAAC	ATAATATCGCGTCCAATTTGATGCAAGTTAATGCCG
ATTTATATCCCACTACGTTCATATAAAAC	CTTTCGGGCTCTATCGTTTCCATGCCCGCTACGGAACC
ATTTATATCCCACTACGTTCATATAAAAC	TTGAAACTGGGCGAGCATCCGAAAATCGTTTCTGAA
ATTTATATCCCACTACGTTCATATAAAAC	CACGTAGAAAAGACAACCCCCACCCAGGAGGGTAAGTA
ATTTATATCCCACTACGTTCATATAAAAC	TCTTCTTCCGCCTGGATACCGCCGTTGATTACATCCCA
ATTTATATCCCACTACGTTCATATAAAAC	CATCACCTTCCGTGGTATACTGGTAACAGCTCCCGAATG
ATTTATATCCCACTACGTTCATATAAAAC	GTAAGAAAGCGGACGGAACGCTTGAACGATGGGAC
ATTTATATCCCACTACGTTCATATAAAAC

>NZ_CP014140|5|3|3202204-3202892|PILER-CR
TTTATATCCCACTACGTTCATATAAAACT	AAAGGTTGTGCACTATCTAATAGATAGTGTGGATGTAA
TTTATATCCCACTACGTTCATATAAAACT	TGGCTTTTTCGCCCGGAATAAGGTGTCACAAATTTTA
TTTATATCCCACTACGTTCATATAAAACA	ACCCAGCGTTTTCCTTCTTTTACGCCCGCAACAAAA
TTTATATCCCACTACGTTCATATAAAACA	TAATATCGCGTCCAATTTGATGCAAGTTAATGCCGA
TTTATATCCCACTACGTTCATATAAAACC	TTTCGGGCTCTATCGTTTCCATGCCCGCTACGGAACCA
TTTATATCCCACTACGTTCATATAAAACT	TGAAACTGGGCGAGCATCCGAAAATCGTTTCTGAAA
TTTATATCCCACTACGTTCATATAAAACC	ACGTAGAAAAGACAACCCCCACCCAGGAGGGTAAGTAA
TTTATATCCCACTACGTTCATATAAAACT	CTTCTTCCGCCTGGATACCGCCGTTGATTACATCCCAA
TTTATATCCCACTACGTTCATATAAAACC	ATCACCTTCCGTGGTATACTGGTAACAGCTCCCGAATGA
TTTATATCCCACTACGTTCATATAAAACG	TAAGAAAGCGGACGGAACGCTTGAACGATGGGACA
TTTATATCCCACTACGTTCATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_057899888.1\|3200916_3201615_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899882.1\|3193261_3194653_-\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_CP014140.1\|WP_057899884.1\|3196580_3196967_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224662
NZ_CP014140.1\|WP_057899880.1\|3191618_3192017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899887.1\|3200297_3200792_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899894.1\|3207088_3207805_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP014140.1\|WP_057899881.1\|3192044_3192452_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899893.1\|3204873_3207072_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
NZ_CP014140.1\|WP_057899896.1\|3208695_3210522_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP014140.1\|WP_057899895.1\|3207808_3208699_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP014140.1\|WP_057899897.1\|3210529_3211255_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187783
NZ_CP014140.1\|WP_057899891.1\|3203367_3204351_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP014140.1\|WP_082706107.1\|3214297_3214477_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP014140.1\|WP_091261102.1\|3197704_3198346_+\|futalosine-hydrolase	unknown	unknown	gnl\|CDD\|236194
NZ_CP014140.1\|WP_162265050.1\|3201800_3202076_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014140.1\|WP_057899886.1\|3198342_3199182_+\|1,4-dihydroxy-6-naphthoate-synthase	unknown	unknown	gnl\|CDD\|270353
NZ_CP014140.1\|WP_057899898.1\|3212560_3214054_+\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_CP014140.1\|WP_057899892.1\|3204344_3204860_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP014140.1\|WP_057899890.1\|3203100_3203364_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP014140.1\|WP_057899883.1\|3194929_3196261_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_057899894.1\|3207088_3207805_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.04108e-29
NZ_CP014140.1\|WP_057899883.1\|3194929_3196261_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	2.94878e-36
NZ_CP014140.1\|WP_057899882.1\|3193261_3194653_-\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_CP014140.1\|WP_057899893.1\|3204873_3207072_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	6.47429e-70
NZ_CP014140.1\|WP_057899896.1\|3208695_3210522_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	3.85e-10
NZ_CP014140.1\|WP_057899895.1\|3207808_3208699_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.18319e-56
NZ_CP014140.1\|WP_057899897.1\|3210529_3211255_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.82844e-25
NZ_CP014140.1\|WP_057899891.1\|3203367_3204351_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.55524e-166
NZ_CP014140.1\|WP_082706107.1\|3214297_3214477_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	0.00131396
NZ_CP014140.1\|WP_091261102.1\|3197704_3198346_+\|futalosine-hydrolase	gnl\|CDD\|236194	PRK08236, PRK08236, hypothetical protein; Provisional.	4.15609e-96
NZ_CP014140.1\|WP_057899884.1\|3196580_3196967_-\|hypothetical-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	3.68813e-13
NZ_CP014140.1\|WP_057899886.1\|3198342_3199182_+\|1,4-dihydroxy-6-naphthoate-synthase	gnl\|CDD\|270353	cd13635, PBP2_Ttha1568_Mqnd, A menaquinone biosynthetic enzyme exhibits the type 2 periplasmic-binding protein fold. This group includes Ttha1568 (MqnD) from Thermus thermophilies HB8, an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. Ttha1568 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.23069e-129
NZ_CP014140.1\|WP_057899892.1\|3204344_3204860_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.38079e-57
NZ_CP014140.1\|WP_057899890.1\|3203100_3203364_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.5967e-27
NZ_CP014140.1\|WP_057899898.1\|3212560_3214054_+\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	4.67816e-173

>NZ_CP014140.1|WP_162265050.1|3201800_3202076_-|hypothetical-protein
MRLLTVAIRTESDPYTVTFPMPQEIPDDVLQWVKEDENKKMLGRFIYAALTGLQGQMPGTFQQTKPEKSKEKMEADEAARKAAAMFLNDDE
>NZ_CP014140.1|WP_057899888.1|3200916_3201615_+|hypothetical-protein
MAKKSKIIPLVAAISLLGSSMVFADESFQPSSSTSQIQSTENISNTNKPYKVERAIINGNEIPVFYFNSKEGAESYKQELMNQVQQQALNSAPNSSEVVTPTYGTKSGYTYRGVDRYNYGHATTTVYNYSDKRVTLKKTVDRTFSTETFITLEAGFADYFKATTGVKLDKKVEYSHEFMIPDVPAKNKADIITWDIYNRFHFTEHNIFSPDRNFVVLSPTESVEGAIFVSPI
>NZ_CP014140.1|WP_057899887.1|3200297_3200792_-|hypothetical-protein
MRILTLMLVISLFLTSCTEVRDKEKEQKKNQIKEEVWLKGKGENWKIENCSARIFGNSIEFEGGKIQYIGSDLFKNEKNLKDFSLEFYLKDNTPLYRHKLIYTDVNILIKNEKIGLIKTDLPENKIYDTKKYFEEMYCLITWNQEGKEKIEKIKLNIVESEKNP
>NZ_CP014140.1|WP_057899886.1|3198342_3199182_+|1,4-dihydroxy-6-naphthoate-synthase
MRIAFSPCPNDTFVFHAWVHGLVPGAPRLDVLYADIDITNSLAASPNGPDVLKISYAALPWVLSEYALLPCGGALGRGCGPLVLTKSSTSKTKEPAMLSGRRVAVPSERSTAYLLFRLWAAQHVPGGVGEIIVMPFHEIMPAVRDGLVDAGLVIHEARFTYPSYGLNLLVDLGSWWEADTHLPIPLGAIIARRSLDLEAIAGWIRASVEYAWANPESSREYVLCHAQELAPEVAQAHIDLYVNKFTANLGEDGYAAVTALLSRAAEEGLVPKVDLAALR
>NZ_CP014140.1|WP_091261102.1|3197704_3198346_+|futalosine-hydrolase
MRVLVITSVPAEKDAVLRGLHGNSRFNVLVAGVGPAAAAASTATALATAKYGLVVNAGIGGGFANRAEVGSLVVANEIVAADLGAETPEGFCSLDELGFGSTRIPVDASLVTQVTEALHAAGLPVTTGPVLTVSTVTGTAATSFERASRVPGATAEAMEGYGVATAAHNHGIPILEIRAISNLVGPRDRAAWRIEEALNILESASSVLLEVLL
>NZ_CP014140.1|WP_057899884.1|3196580_3196967_-|hypothetical-protein
MKKGYVKKLILADIFAEGAEKFVKKLCEQTSAEIVVRQADASSTESVVAILTDVDVLLYTRIPEYNFKVMQACLDTKTHDIDMASDGPDSLLQQLDWDGKFKQAGIVGIMGLGCNLGFSNVAARYAAD
>NZ_CP014140.1|WP_057899883.1|3194929_3196261_-|APC-family-permease
MKEQTNLKRILTLAPVVMIGLAYMDPLVVFDSFGVVAQLTKGHTATSYIVIVVALLFTAYSYGKMVQAYPFAGSTYTYTQRSFSPYVGFLVGWAVMLDYLFLPMVNYAIGGVYLSSAFPAIPYPIWVIILATILTTVTLLGVKLTANVNTLFVSFQLLVTITFVGFMVKGITNGIGAGVLISSEPFYSTNIDLGLIMSGAAILCFSFLGFDAVTTLSEETLEPKKTIPRAIFLVALIGGVLFTTTSYFLQLVHPDFAAYQDADAASMEIAELIGGAFLQTFFLSGSMVAVCSSSLASQTSASRLLFAMGREDSLPKRFFGYIHPKLGTPVFNILFIGVISLTAIMGELEVIFSFISFGALIGFTFVNLSVIAHYFVRNKQRGGMDTIRYLVIPAIGAVVSMWLFTSLHISALILGVSWIIVGVVYSFFIRKKKLRLDLAIEEA
>NZ_CP014140.1|WP_057899882.1|3193261_3194653_-|L-cystine-transporter
MTTFLVIVNVAFMLLFITGLYIMQKKHISFSKRVFTALGVGVVFGLVMQFFYGTKSEVVKTSIDWFNIVGTGYVKLLQMIVMPLVFISILSAFTKLKLSNNIGKISGIIIGILVGTTAIAAAIGIATSLTFNLEAVQIEQGDAEITRATQLEQKLGDIQNITLPQKMVELLPENPFMDLTGARPTSTIAVVIFAAIIGLAFLGVKRKNPEQADIFAKIVETFYTIIIRVVTLVLRLTPYGILALMTKVTATSDYNAIWKLGKFVVASYVALIIMLIIHLLLLAFAGLNPMTYVKKALPVLIFAFTSRTSAGALPLNVKTQTNELGVPEGIANFAGSFGLSIGQNGCAGIYPAMLAVMIAPTAGIDPFTPSFILTLILVVAISSFGVAGVGGGATFAALLVLSTMNLPVALAGLLISVEPLIDMGRTALNVSGSMTAGLLTSKITKELDANVFAETKQQKAEAL
>NZ_CP014140.1|WP_057899881.1|3192044_3192452_-|hypothetical-protein
MKRLILSAGLSTVILMGSMGSAFAAEPPTNSPDGGLGSILGAVNQLVGSSKVNVQSGVSLNVDDVTVTAKAVNSTEQSGLTGLISGGILGGTSGTSASASYAGYSASTSANGSWGLASSVQSIGGLLNNLGQALK
>NZ_CP014140.1|WP_057899880.1|3191618_3192017_-|hypothetical-protein
MNKWIKTVGLSAMLVAGSLIAGNAIPASAAGLGDILGSVNSLVGSTNVSSGSLVNASGPNFNIQAGSTYTVNQDGVTGLLGGVLGGTYNTSANLSGPNGLSASASTNGGYGLASSVQSLVNGLGGLLGGLLK
>NZ_CP014140.1|WP_057899890.1|3203100_3203364_-|CRISPR-associated-endonuclease-Cas2
MFVIVTYDVGEKRVHKVCKKLKQYLMWTQNSVFEGEITKGKLVKCLTELEKIMDKREDSIYVYEVQNPRNIVKRVYGQEKSFEEMFL
>NZ_CP014140.1|WP_057899891.1|3203367_3204351_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MLKDHYIFSTGRLQRKDNTLYFVDAEGKKKSLPIEQIENLHIFGQVDVNSALLNLLAQYGVCLHFYNYHDYYVGTFYPREKNVSGYTVVQQSVHYLNREKRLYLARSFLYGGIHHMLRNLRRHKEKTEEIIRAIEKEAAKLEDTAKIPELMGIEGRIRQEYYQAFNVMLKPEFAFEKRTKRPPTDPLNALISFGNSRMYTEILSEMYKTMLDPTISFLHEPSSKRFSLSLDLAEIFKPLLVDTLIASLVNNRVITLKHFDEMEGIVFLNEEGRKKFLAEWEKKLETTVQHRTLKRKVSYRYFIRLECYKLIKHFIGDTLYKPLKAWW
>NZ_CP014140.1|WP_057899892.1|3204344_3204860_-|CRISPR-associated-protein-Cas4
MVEADIKGLQVHYYSVCQRKLWLFSKGITMEQTNDRVMEGKMLHERAYPQLEQKEILIDDTFKIDAFDGEYVREVKISSKMGEADRMQMLYYLYQLKQRGVEKKGLISYTKERDTEVVELTEAEEAKVIEALAGIKRILQRPRPPGLKKLRYCSKCAYYEFCFAMERDEEC
>NZ_CP014140.1|WP_057899893.1|3204873_3207072_-|CRISPR-associated-helicase/endonuclease-Cas3
MFYAKTKPVQTIREHTDCLVAELERLKSTYGSRFVHMDERMWKLLRLAVEYHDVGKAWPGFQNRLRKQLGEKKLPNTITYSVPHNYLSVGMIPIKKYKLTKEESRLLIHAVGYHHERSELPDKEKIEEILENEMRPYLPQLIDHMKLDIPETFSYKSIARLSKRYSQFDDDFYKYVLLKGLVHRIDHAASAGVDIELHADKHIGAQVTAYMEHKGYAKNELQQFAEANTDKSIIVIAQTGMGKTEAALLWINEDKGFFTLPLRVSINAIYDRILSPQEINYHPEALGLLHSTSNDYLQEKEELDEKWEDIYRHSRHLSSKLLLTTIDQILKFPFGYRGFEKELAAMANAKVVIDEIQAYEPKIAAMLIKALEMIHKIGGKFMVMTATLPTIYLDELKKRNIITESDVGKFINQDITRHRICLRQEGITEVGEEIIEQAKDTQVLVIVNTVRRAVKMYEQLRKVDPEANVYLLHSQFTQEDRKLLEEEIKSFNKPKPGEPRRSGVWVTTQLVEASLDIDFDYLYTEISTLDSFFQRLGRCYRNGKRSPVQPNVYVFTEDVAGLGYIYDADLVKKGLALLQPYQGRILDEQAKVEMVQRLYSRESLANTAFLREFEEALHEFDFLDFYEVTGQEAQKKLRDIQTVQVIPECFFDEIFDLVKEYEKCQVDWKRRQEIRRKIEAKSIGVYRFQAEDKLSTLSGLDNIFILHCGYEFDRESRQGRGIVSDIEITMFS
>NZ_CP014140.1|WP_057899894.1|3207088_3207805_-|type-I-B-CRISPR-associated-protein-Cas5
MKALRLKLYQETACYKKPLAFKVGETYPLPPYATVKGMLHAMLGANEFIPMRLSIQGTYEAKMVDYQAHYFFKKTDVAEFPLVLDGLASKPYEYEHMTKMPLYMHLLYGVQLLIHVEAVPEVLEAIVAAIENGNTHWSLGRWEDLVRIDEYELVEVKEIEERIRLKYNAYILRDVLNSLETELNAVPYQLNWKYEIKNGIRRWEKIDVGYVLAVSGLEFDADDDVLQDQDGNLIFYNL
>NZ_CP014140.1|WP_057899895.1|3207808_3208699_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MTQALTMTIVFEGNSLNYGEGIANISELKKLHRSNGEVYSFASRQSLRYDIVRLGNQWYGWNLDTVAKEKGGVVQFRKDVTINDSVEMDLFGYLKTSQKSEKRPAVVRLSHAISLEPYRGDLEFLNNMGLASRIDQMPNLANIEQHASLYTYTVTVDLSRVGVDGEVELPNEQKAERMRQFLEILKFLNRDIRGRQESLAPLFVIGGVYKAANPFFLGKVQLKQSSEKWEIDTRPLESTMEQTFAGEPVGERTRIGMVSGIFGNEEEYHTTFGDRVVSIEAFFQHIQKEVAAFYGG
>NZ_CP014140.1|WP_057899896.1|3208695_3210522_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MVLRLYASDWLMSMALVGLQRLYIYGEKHNIIPDEHRGTVRETDSGLEIEPVALGYLPQIFFSYLIDEYSVAERDYERLKNNLKYGKNKERFSDALASIKKTIADSTKKILKYFTDTPAEAALQDIQNRLKEIKHHDQLEELQICIHDYYNVVKQKEINDKLTLNYFKSVILSPFFGQPSFLNVAKNSLDLSGHIDLFYKDYVLPVQNDIQLLEVINKTETGEDVLAFLDEHADYSPFRTLKKAWKKKDIIFIRNYMKEEVPECTLAAGQPAFQNFEEMMFSPLGVSSKNAANFFWDLEKNRALPISSLAKLVLFCVPLGATMYYRKDGFDDQGEVRLYAGFVHTDEKFKEIFQKNEHFKQLKKQSQSFEKIVSRLVRGIRKESEYIMQHLFFLEMSANYQSKRTLLDYYHIPHYLAKYFQEYGEKLEHISPYEYREHFIRNALQGMDTKHVIFKYLRHVIKKGGSGLGVYIAVRERHRIECYKRGEKDMKKQDNRVAAFFNSGRDIRKAFEQAGKARESEDTYSASAGKKVAGIAYRLLNATKANNKDSFMDTLLRVYMSVDKPVPTVFLHAIHEREMDFTTAANAFIAGMLSSENEKQKDREEASV
>NZ_CP014140.1|WP_057899897.1|3210529_3211255_-|CRISPR-associated-endoribonuclease-Cas6
MRIVFSLKTKVIPISYRMIIVSLVKECLQQANEKYYRKLYETNQAVLKPFTFAPYLKNFRFAEDEIYLDELVLTFSSPDFEFMLHFYNGLRKVSWFRYKQYEFIRGRVRMLPEQTIRNRSIIVKTQSPLLIEDENRKPVSPERPEFAKHFAYMADTILREYRGKGLRESLIVTPLAMQKKVIKESNHVFTETHGPNRYLYFTTYQGQLRLEGHPEDLQLLYQLGMGKRRGQGFGLVDVIRG
>NZ_CP014140.1|WP_057899898.1|3212560_3214054_+|peptide-MFS-transporter
MSNSNKQKIVSSVPQQGFFGHPKGLFTLSFTEFWERFSYYGMRAILVFYMYYEVSKGGLGLDETTALAIMSIYGSLVYMSSIIGGWLADRIFGTSKAVFYGGILIMFGHIALAIPGNITMFFVSMVLIVLGTGLLKPNVSSIVGDIYSEEDNRRDAGFSIFYMGINLGGFLAPLIVGTVGMKYNFHLGFSIAAVGMFLGLLAFIFTKKKNLGLAGTFVANPLSPAEKKKVFTLIGVGAALIAVLIVIAISMNLLTFDTFIALVGILGIVIPAIYFIVMYRSPKTTAIERSRVIAYIPLFIASVMFWAIQEQGSTILANYADKRTQLDFAGIHISPAWFQSLNPLFIILFAPVFAWLWVKLGSRQPSIPKKFSLGLLFAGLSYIVILLPAYFGGDDSLVNPLWLVLSYLIVVFGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQIVKFYTPKTEMIYFGFIGGAAILFGILLFALSPKIEGYMKGVK
>NZ_CP014140.1|WP_082706107.1|3214297_3214477_-|IS3-family-transposase
MAFSNESSSTSRHIYRTREKAKKSLFEYTKIFYNNKRIHSATEYFSPSEYERMYFKKTA

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Crispr_ID: NZ_CP014140_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014140_6

3215204-3218530

Unclear

I-A

Consensus_repeat	Method
CTTTATATCCCACTACGTTCAGATAAAAC	CRISPRCasFinder
CTTTATATCCCACTACGTTCAGATAAAAC	CRT
CTTTATATCCCACTACGTTCAGATAAAAC	PILER-CR

50 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of NZ_CP014140_6

>merge|NZ_CP014140|6|3215204-3218530|CRISPRCasFinder,CRT,PILER-CR
ATTTAGATCCCACTACGTTCAGATAAAACAGGTATTTCGTGAATTGCCGTATTTGCTCACAGTTGTTTTATATCCCACTACGTTCAGATAAAACCATACGAATCGCTAGGAGTAGAGTCGGACGAAGTAGCCTTTATATCCCACTACGTTCAGATAAAACTACGTTGTGATTTTATGTTTAAAAAATCCTCTCAACTTTATATCCCACTACGTTCAGATAAAACAGACGCTTTTCACTACGAAGTTTCCGTTCAGTTTGCCTCTTTATATCCCACTACGTTCAGATAAAACTCTTCGTGGGAAATCTCAATATGTTCTTTCAGCTTTTGACTTTATATCCCACTACGTTCAGATAAAACTGCCAGCAGGTGTAAACTTCTTCCCCTTCATATTCTACTTTATATCCCACTACGTTCAGATAAAACTTGTTAAAGGAAATGGGACGGTCAAAGACAATGTAATGACTTTATATCCCACTACGTTCAGATAAAACTCATTTTCCTGACCCGGCAATAGTTGTTGCGAACGGTCTTTATATCCCACTACGTTCAGATAAAACTCCTGAAGAGTGGCGAGAAATGAACCCTGTTATTTCTTTATATCCCACTACGTTCAGATAAAACGTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCCCTTTATATCCCACTACGTTCAGATAAAACTGCTTTCTGCGAAAAACTGCCGAAAGATGCAGTTGACTTTATATCCCACTACGTTCAGATAAAACGAGTTAAAAGTGACCAAACTCAAAACTCAATATCCATCTTTATATCCCACTACGTTCAGATAAAACTTTAGAAATAGAAGTATCTAAACCAGGTTCAGCAGCTTTATATCCCACTACGTTCAGATAAAACGGGTCAGGAAGAAAAATGTTGCCCGCTTCAATCTCCTTTATATCCCACTACGTTCAGATAAAACTTTGAGAGCAGCTTCCCTGCCCCGTCTCGCCGTTCTTCTTTATATCCCACTACGTTCAGATAAAACAAGATTACGGACAAAAAGGAGGAAGAATACATGATTCCCCTTTATATCCCACTACGTTCAGATAAAACTTTTGCAGGATTAGGTGGGTTTCGTTTAGGAATGAAAACTTTATATCCCACTACGTTCAGATAAAACTGAGCCACGTATCGAAATATACAACAAATATGGACAACTTTATATCCCACTACGTTCAGATAAAACTTGCGACCTGCCCGCAAATGTATTTGGGCTATATAAACTTTATATCCCACTACGTTCAGATAAAACTCACAGCATCACGAAACTCAGCAGTCTGGAAGGGCGAATTCTTTATATCCCACTACGTTCAGATAAAACCTCAAAAGAAAATACGCGTCCCAGGGCAAAGAAAACTTTATATCCCACTACGTTCAGATAAAACGGTCAGTTTGCTTCCTTGATACCATATCACTCAAGCCTTTATATCCCACTACGTTCAGATAAAACTACAGTGGAAATTGTATCCGATAGGGCTATGTCTCTTCCTTTATATCCCACTACGTTCAGATAAAACTGCCCAAAAGAAAATAAGCGTCCCAGGGCAAAGAAAACTTTATATCCCACTACGTTCAGATAAAACAGTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCCCTTTATATCCCACTACGTTCAGATAAAACACAATAATACTGCTCACCGGTATGATATACCCTTCCAGCTTTATATCCCACTACGTTCAGATAAAACCGGGCAAGACGCATGAAGCCGCCCGCAGTAAGCACCTTTATATCCCACTACGTTCAGATAAAACGCACATTCTCAAAGATGGACTAAAAAACCAGTTCCCCTTTATATCCCACTACGTTCAGATAAAACTATGCCGTTTGTTTCGTTTATTTGGCTTTTGTCTTTCTTTATATCCCACTACGTTCAGATAAAACAGAATCGAAATGAGCAACAGCAACCCACCGTGAGCACTTTATATCCCACTACGTTCAGATAAAACGGGTGAGTGGGTGAACATAACAGAAAAAGGTTGGCTGACTTTATATCCCACTACGTTCAGATAAAACCTTCCTACCCACACATTCACCTCCTTCCATAAAAAAACCTTTATATCCCACTACGTTCAGATAAAACACAACTAGCCACGATAAATCCCAAGAACCACATAGCCCTTTATATCCCACTACGTTCAGATAAAACTTTTCCCCCAGTCAGTCGGGTCAGGAGAACCATCACCCTTTATATCCCACTACGTTCAGATAAAACCAGACTGACAGACAAATATGAAATCATATCCGAACTTCCTTTATATCCCACTACGTTCAGATAAAACTGTGCAGCGATATTTTTTTTCAATCCAATTCTTTCTACTTTATATCCCACTACGTTCAGATAAAACATAGAGAGCAAGAAATATGCGTCCCAAGGCAAAGAAAACTTTATATCCCACTACGTTCAGATAAAACGGCGCTCGTCAACGGTACCGGAGCGCCAGCGAGGATACTTTATATCCCACTACGTTCAGATAAAACGAAGTCGGTTAAAGTTGGTGAGACGCGCAATATATACTTTATATCCCACTACGTTCAGATAAAACATACGAATCCAAACTAGAAAAATCGTATGAAAAACGAAACTTTATATCCCACTACGTTCAGATAAAACCTCAGAAGTTTGGAAGGGCGAGTTCGGAAGCCACCCAACTTTATATCCCACTACGTTCAGATAAAACATTGATTTCATGACTGTAGTATAGTATAATGATGTCACTTTATATCCCACTACGTTCAGATAAAACTGTAGTCGTAGTTCCCCCCGTTTGCTCAGACGGGAGAGACTTTATATCCCACTACGTTCAGATAAAACAAGTATAACGGCCCAGTTACGAAAAAGACGTTTACAACTTTATATCCCACTACGTTCAGATAAAACGGCGGACACAACGCCCGCCCCAACAATACCACTAATCTTTATATCCCACTACGTTCAGATAAAACTTAAAACGATGGATGCTGAAGCAAAGGCGCTGAAAGCTTTATATCCCACTACGTTCAGATAAAACACATTGAGTACATTGGAATATTTGCACCACGTGAATCCTTTATATCCCACTACGTTCAGATAAAACCGCCGAGCGAAGTGGAGCGGTAGCGGAACGAAGCGACTTTATATCCCACTACGTTCAGATAAAACTAATGCACAGAAGCAGTATGACTTACTTCGTTCACTCTTTATATCCCACTACGTTCAGATAAAACAAGAATTTGTTTAATTATACTTCGCTTGGCAGGGCGTCTTTATATCCCACTACGTTCAGATAAAAC

>NZ_CP014140|6|6|3215204-3218530|CRISPRCasFinder
ATTTAGATCCCACTACGTTCAGATAAAAC	AGGTATTTCGTGAATTGCCGTATTTGCTCACAGTTG
TTTTATATCCCACTACGTTCAGATAAAAC	CATACGAATCGCTAGGAGTAGAGTCGGACGAAGTAGC
CTTTATATCCCACTACGTTCAGATAAAAC	TACGTTGTGATTTTATGTTTAAAAAATCCTCTCAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGACGCTTTTCACTACGAAGTTTCCGTTCAGTTTGCCT
CTTTATATCCCACTACGTTCAGATAAAAC	TCTTCGTGGGAAATCTCAATATGTTCTTTCAGCTTTTGA
CTTTATATCCCACTACGTTCAGATAAAAC	TGCCAGCAGGTGTAAACTTCTTCCCCTTCATATTCTA
CTTTATATCCCACTACGTTCAGATAAAAC	TTGTTAAAGGAAATGGGACGGTCAAAGACAATGTAATGA
CTTTATATCCCACTACGTTCAGATAAAAC	TCATTTTCCTGACCCGGCAATAGTTGTTGCGAACGGT
CTTTATATCCCACTACGTTCAGATAAAAC	TCCTGAAGAGTGGCGAGAAATGAACCCTGTTATTT
CTTTATATCCCACTACGTTCAGATAAAAC	GTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TGCTTTCTGCGAAAAACTGCCGAAAGATGCAGTTGA
CTTTATATCCCACTACGTTCAGATAAAAC	GAGTTAAAAGTGACCAAACTCAAAACTCAATATCCAT
CTTTATATCCCACTACGTTCAGATAAAAC	TTTAGAAATAGAAGTATCTAAACCAGGTTCAGCAG
CTTTATATCCCACTACGTTCAGATAAAAC	GGGTCAGGAAGAAAAATGTTGCCCGCTTCAATCTC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTGAGAGCAGCTTCCCTGCCCCGTCTCGCCGTTCTT
CTTTATATCCCACTACGTTCAGATAAAAC	AAGATTACGGACAAAAAGGAGGAAGAATACATGATTCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTGCAGGATTAGGTGGGTTTCGTTTAGGAATGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	TGAGCCACGTATCGAAATATACAACAAATATGGACAA
CTTTATATCCCACTACGTTCAGATAAAAC	TTGCGACCTGCCCGCAAATGTATTTGGGCTATATAAA
CTTTATATCCCACTACGTTCAGATAAAAC	TCACAGCATCACGAAACTCAGCAGTCTGGAAGGGCGAATT
CTTTATATCCCACTACGTTCAGATAAAAC	CTCAAAAGAAAATACGCGTCCCAGGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGTCAGTTTGCTTCCTTGATACCATATCACTCAAGC
CTTTATATCCCACTACGTTCAGATAAAAC	TACAGTGGAAATTGTATCCGATAGGGCTATGTCTCTTC
CTTTATATCCCACTACGTTCAGATAAAAC	TGCCCAAAAGAAAATAAGCGTCCCAGGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCC
CTTTATATCCCACTACGTTCAGATAAAAC	ACAATAATACTGCTCACCGGTATGATATACCCTTCCAG
CTTTATATCCCACTACGTTCAGATAAAAC	CGGGCAAGACGCATGAAGCCGCCCGCAGTAAGCAC
CTTTATATCCCACTACGTTCAGATAAAAC	GCACATTCTCAAAGATGGACTAAAAAACCAGTTCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TATGCCGTTTGTTTCGTTTATTTGGCTTTTGTCTTT
CTTTATATCCCACTACGTTCAGATAAAAC	AGAATCGAAATGAGCAACAGCAACCCACCGTGAGCA
CTTTATATCCCACTACGTTCAGATAAAAC	GGGTGAGTGGGTGAACATAACAGAAAAAGGTTGGCTGA
CTTTATATCCCACTACGTTCAGATAAAAC	CTTCCTACCCACACATTCACCTCCTTCCATAAAAAAAC
CTTTATATCCCACTACGTTCAGATAAAAC	ACAACTAGCCACGATAAATCCCAAGAACCACATAGCC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTCCCCCAGTCAGTCGGGTCAGGAGAACCATCACC
CTTTATATCCCACTACGTTCAGATAAAAC	CAGACTGACAGACAAATATGAAATCATATCCGAACTTC
CTTTATATCCCACTACGTTCAGATAAAAC	TGTGCAGCGATATTTTTTTTCAATCCAATTCTTTCTA
CTTTATATCCCACTACGTTCAGATAAAAC	ATAGAGAGCAAGAAATATGCGTCCCAAGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGCGCTCGTCAACGGTACCGGAGCGCCAGCGAGGATA
CTTTATATCCCACTACGTTCAGATAAAAC	GAAGTCGGTTAAAGTTGGTGAGACGCGCAATATATA
CTTTATATCCCACTACGTTCAGATAAAAC	ATACGAATCCAAACTAGAAAAATCGTATGAAAAACGAAA
CTTTATATCCCACTACGTTCAGATAAAAC	CTCAGAAGTTTGGAAGGGCGAGTTCGGAAGCCACCCAA
CTTTATATCCCACTACGTTCAGATAAAAC	ATTGATTTCATGACTGTAGTATAGTATAATGATGTCA
CTTTATATCCCACTACGTTCAGATAAAAC	TGTAGTCGTAGTTCCCCCCGTTTGCTCAGACGGGAGAGA
CTTTATATCCCACTACGTTCAGATAAAAC	AAGTATAACGGCCCAGTTACGAAAAAGACGTTTACAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGCGGACACAACGCCCGCCCCAACAATACCACTAAT
CTTTATATCCCACTACGTTCAGATAAAAC	TTAAAACGATGGATGCTGAAGCAAAGGCGCTGAAAG
CTTTATATCCCACTACGTTCAGATAAAAC	ACATTGAGTACATTGGAATATTTGCACCACGTGAATC
CTTTATATCCCACTACGTTCAGATAAAAC	CGCCGAGCGAAGTGGAGCGGTAGCGGAACGAAGCGA
CTTTATATCCCACTACGTTCAGATAAAAC	TAATGCACAGAAGCAGTATGACTTACTTCGTTCACT
CTTTATATCCCACTACGTTCAGATAAAAC	AAGAATTTGTTTAATTATACTTCGCTTGGCAGGGCGT
CTTTATATCCCACTACGTTCAGATAAAAC

>NZ_CP014140|6|3|3215204-3218530|CRT
ATTTAGATCCCACTACGTTCAGATAAAAC	AGGTATTTCGTGAATTGCCGTATTTGCTCACAGTTG
TTTTATATCCCACTACGTTCAGATAAAAC	CATACGAATCGCTAGGAGTAGAGTCGGACGAAGTAGC
CTTTATATCCCACTACGTTCAGATAAAAC	TACGTTGTGATTTTATGTTTAAAAAATCCTCTCAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGACGCTTTTCACTACGAAGTTTCCGTTCAGTTTGCCT
CTTTATATCCCACTACGTTCAGATAAAAC	TCTTCGTGGGAAATCTCAATATGTTCTTTCAGCTTTTGA
CTTTATATCCCACTACGTTCAGATAAAAC	TGCCAGCAGGTGTAAACTTCTTCCCCTTCATATTCTA
CTTTATATCCCACTACGTTCAGATAAAAC	TTGTTAAAGGAAATGGGACGGTCAAAGACAATGTAATGA
CTTTATATCCCACTACGTTCAGATAAAAC	TCATTTTCCTGACCCGGCAATAGTTGTTGCGAACGGT
CTTTATATCCCACTACGTTCAGATAAAAC	TCCTGAAGAGTGGCGAGAAATGAACCCTGTTATTT
CTTTATATCCCACTACGTTCAGATAAAAC	GTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TGCTTTCTGCGAAAAACTGCCGAAAGATGCAGTTGA
CTTTATATCCCACTACGTTCAGATAAAAC	GAGTTAAAAGTGACCAAACTCAAAACTCAATATCCAT
CTTTATATCCCACTACGTTCAGATAAAAC	TTTAGAAATAGAAGTATCTAAACCAGGTTCAGCAG
CTTTATATCCCACTACGTTCAGATAAAAC	GGGTCAGGAAGAAAAATGTTGCCCGCTTCAATCTC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTGAGAGCAGCTTCCCTGCCCCGTCTCGCCGTTCTT
CTTTATATCCCACTACGTTCAGATAAAAC	AAGATTACGGACAAAAAGGAGGAAGAATACATGATTCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTGCAGGATTAGGTGGGTTTCGTTTAGGAATGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	TGAGCCACGTATCGAAATATACAACAAATATGGACAA
CTTTATATCCCACTACGTTCAGATAAAAC	TTGCGACCTGCCCGCAAATGTATTTGGGCTATATAAA
CTTTATATCCCACTACGTTCAGATAAAAC	TCACAGCATCACGAAACTCAGCAGTCTGGAAGGGCGAATT
CTTTATATCCCACTACGTTCAGATAAAAC	CTCAAAAGAAAATACGCGTCCCAGGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGTCAGTTTGCTTCCTTGATACCATATCACTCAAGC
CTTTATATCCCACTACGTTCAGATAAAAC	TACAGTGGAAATTGTATCCGATAGGGCTATGTCTCTTC
CTTTATATCCCACTACGTTCAGATAAAAC	TGCCCAAAAGAAAATAAGCGTCCCAGGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	AGTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCC
CTTTATATCCCACTACGTTCAGATAAAAC	ACAATAATACTGCTCACCGGTATGATATACCCTTCCAG
CTTTATATCCCACTACGTTCAGATAAAAC	CGGGCAAGACGCATGAAGCCGCCCGCAGTAAGCAC
CTTTATATCCCACTACGTTCAGATAAAAC	GCACATTCTCAAAGATGGACTAAAAAACCAGTTCCC
CTTTATATCCCACTACGTTCAGATAAAAC	TATGCCGTTTGTTTCGTTTATTTGGCTTTTGTCTTT
CTTTATATCCCACTACGTTCAGATAAAAC	AGAATCGAAATGAGCAACAGCAACCCACCGTGAGCA
CTTTATATCCCACTACGTTCAGATAAAAC	GGGTGAGTGGGTGAACATAACAGAAAAAGGTTGGCTGA
CTTTATATCCCACTACGTTCAGATAAAAC	CTTCCTACCCACACATTCACCTCCTTCCATAAAAAAAC
CTTTATATCCCACTACGTTCAGATAAAAC	ACAACTAGCCACGATAAATCCCAAGAACCACATAGCC
CTTTATATCCCACTACGTTCAGATAAAAC	TTTTCCCCCAGTCAGTCGGGTCAGGAGAACCATCACC
CTTTATATCCCACTACGTTCAGATAAAAC	CAGACTGACAGACAAATATGAAATCATATCCGAACTTC
CTTTATATCCCACTACGTTCAGATAAAAC	TGTGCAGCGATATTTTTTTTCAATCCAATTCTTTCTA
CTTTATATCCCACTACGTTCAGATAAAAC	ATAGAGAGCAAGAAATATGCGTCCCAAGGCAAAGAAAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGCGCTCGTCAACGGTACCGGAGCGCCAGCGAGGATA
CTTTATATCCCACTACGTTCAGATAAAAC	GAAGTCGGTTAAAGTTGGTGAGACGCGCAATATATA
CTTTATATCCCACTACGTTCAGATAAAAC	ATACGAATCCAAACTAGAAAAATCGTATGAAAAACGAAA
CTTTATATCCCACTACGTTCAGATAAAAC	CTCAGAAGTTTGGAAGGGCGAGTTCGGAAGCCACCCAA
CTTTATATCCCACTACGTTCAGATAAAAC	ATTGATTTCATGACTGTAGTATAGTATAATGATGTCA
CTTTATATCCCACTACGTTCAGATAAAAC	TGTAGTCGTAGTTCCCCCCGTTTGCTCAGACGGGAGAGA
CTTTATATCCCACTACGTTCAGATAAAAC	AAGTATAACGGCCCAGTTACGAAAAAGACGTTTACAA
CTTTATATCCCACTACGTTCAGATAAAAC	GGCGGACACAACGCCCGCCCCAACAATACCACTAAT
CTTTATATCCCACTACGTTCAGATAAAAC	TTAAAACGATGGATGCTGAAGCAAAGGCGCTGAAAG
CTTTATATCCCACTACGTTCAGATAAAAC	ACATTGAGTACATTGGAATATTTGCACCACGTGAATC
CTTTATATCCCACTACGTTCAGATAAAAC	CGCCGAGCGAAGTGGAGCGGTAGCGGAACGAAGCGA
CTTTATATCCCACTACGTTCAGATAAAAC	TAATGCACAGAAGCAGTATGACTTACTTCGTTCACT
CTTTATATCCCACTACGTTCAGATAAAAC	AAGAATTTGTTTAATTATACTTCGCTTGGCAGGGCGT
CTTTATATCCCACTACGTTCAGATAAAAC

>NZ_CP014140|6|4|3215205-3218530|PILER-CR
TTTAGATCCCACTACGTTCAGATAAAACA	GGTATTTCGTGAATTGCCGTATTTGCTCACAGTTGT
TTTATATCCCACTACGTTCAGATAAAACC	ATACGAATCGCTAGGAGTAGAGTCGGACGAAGTAGCC
TTTATATCCCACTACGTTCAGATAAAACT	ACGTTGTGATTTTATGTTTAAAAAATCCTCTCAAC
TTTATATCCCACTACGTTCAGATAAAACA	GACGCTTTTCACTACGAAGTTTCCGTTCAGTTTGCCTC
TTTATATCCCACTACGTTCAGATAAAACT	CTTCGTGGGAAATCTCAATATGTTCTTTCAGCTTTTGAC
TTTATATCCCACTACGTTCAGATAAAACT	GCCAGCAGGTGTAAACTTCTTCCCCTTCATATTCTAC
TTTATATCCCACTACGTTCAGATAAAACT	TGTTAAAGGAAATGGGACGGTCAAAGACAATGTAATGAC
TTTATATCCCACTACGTTCAGATAAAACT	CATTTTCCTGACCCGGCAATAGTTGTTGCGAACGGTC
TTTATATCCCACTACGTTCAGATAAAACT	CCTGAAGAGTGGCGAGAAATGAACCCTGTTATTTC
TTTATATCCCACTACGTTCAGATAAAACG	TTAAAGCCAACTTGCGTATGGACATTTTCAAGCCCC
TTTATATCCCACTACGTTCAGATAAAACT	GCTTTCTGCGAAAAACTGCCGAAAGATGCAGTTGAC
TTTATATCCCACTACGTTCAGATAAAACG	AGTTAAAAGTGACCAAACTCAAAACTCAATATCCATC
TTTATATCCCACTACGTTCAGATAAAACT	TTAGAAATAGAAGTATCTAAACCAGGTTCAGCAGC
TTTATATCCCACTACGTTCAGATAAAACG	GGTCAGGAAGAAAAATGTTGCCCGCTTCAATCTCC
TTTATATCCCACTACGTTCAGATAAAACT	TTGAGAGCAGCTTCCCTGCCCCGTCTCGCCGTTCTTC
TTTATATCCCACTACGTTCAGATAAAACA	AGATTACGGACAAAAAGGAGGAAGAATACATGATTCCCC
TTTATATCCCACTACGTTCAGATAAAACT	TTTGCAGGATTAGGTGGGTTTCGTTTAGGAATGAAAAC
TTTATATCCCACTACGTTCAGATAAAACT	GAGCCACGTATCGAAATATACAACAAATATGGACAAC
TTTATATCCCACTACGTTCAGATAAAACT	TGCGACCTGCCCGCAAATGTATTTGGGCTATATAAAC
TTTATATCCCACTACGTTCAGATAAAACT	CACAGCATCACGAAACTCAGCAGTCTGGAAGGGCGAATTC
TTTATATCCCACTACGTTCAGATAAAACC	TCAAAAGAAAATACGCGTCCCAGGGCAAAGAAAAC
TTTATATCCCACTACGTTCAGATAAAACG	GTCAGTTTGCTTCCTTGATACCATATCACTCAAGCC
TTTATATCCCACTACGTTCAGATAAAACT	ACAGTGGAAATTGTATCCGATAGGGCTATGTCTCTTCC
TTTATATCCCACTACGTTCAGATAAAACT	GCCCAAAAGAAAATAAGCGTCCCAGGGCAAAGAAAAC
TTTATATCCCACTACGTTCAGATAAAACA	GTTAAAGCCAACTTGCGTATGGACATTTTCAAGCCCC
TTTATATCCCACTACGTTCAGATAAAACA	CAATAATACTGCTCACCGGTATGATATACCCTTCCAGC
TTTATATCCCACTACGTTCAGATAAAACC	GGGCAAGACGCATGAAGCCGCCCGCAGTAAGCACC
TTTATATCCCACTACGTTCAGATAAAACG	CACATTCTCAAAGATGGACTAAAAAACCAGTTCCCC
TTTATATCCCACTACGTTCAGATAAAACT	ATGCCGTTTGTTTCGTTTATTTGGCTTTTGTCTTTC
TTTATATCCCACTACGTTCAGATAAAACA	GAATCGAAATGAGCAACAGCAACCCACCGTGAGCAC
TTTATATCCCACTACGTTCAGATAAAACG	GGTGAGTGGGTGAACATAACAGAAAAAGGTTGGCTGAC
TTTATATCCCACTACGTTCAGATAAAACC	TTCCTACCCACACATTCACCTCCTTCCATAAAAAAACC
TTTATATCCCACTACGTTCAGATAAAACA	CAACTAGCCACGATAAATCCCAAGAACCACATAGCCC
TTTATATCCCACTACGTTCAGATAAAACT	TTTCCCCCAGTCAGTCGGGTCAGGAGAACCATCACCC
TTTATATCCCACTACGTTCAGATAAAACC	AGACTGACAGACAAATATGAAATCATATCCGAACTTCC
TTTATATCCCACTACGTTCAGATAAAACT	GTGCAGCGATATTTTTTTTCAATCCAATTCTTTCTAC
TTTATATCCCACTACGTTCAGATAAAACA	TAGAGAGCAAGAAATATGCGTCCCAAGGCAAAGAAAAC
TTTATATCCCACTACGTTCAGATAAAACG	GCGCTCGTCAACGGTACCGGAGCGCCAGCGAGGATAC
TTTATATCCCACTACGTTCAGATAAAACG	AAGTCGGTTAAAGTTGGTGAGACGCGCAATATATAC
TTTATATCCCACTACGTTCAGATAAAACA	TACGAATCCAAACTAGAAAAATCGTATGAAAAACGAAAC
TTTATATCCCACTACGTTCAGATAAAACC	TCAGAAGTTTGGAAGGGCGAGTTCGGAAGCCACCCAAC
TTTATATCCCACTACGTTCAGATAAAACA	TTGATTTCATGACTGTAGTATAGTATAATGATGTCAC
TTTATATCCCACTACGTTCAGATAAAACT	GTAGTCGTAGTTCCCCCCGTTTGCTCAGACGGGAGAGAC
TTTATATCCCACTACGTTCAGATAAAACA	AGTATAACGGCCCAGTTACGAAAAAGACGTTTACAAC
TTTATATCCCACTACGTTCAGATAAAACG	GCGGACACAACGCCCGCCCCAACAATACCACTAATC
TTTATATCCCACTACGTTCAGATAAAACT	TAAAACGATGGATGCTGAAGCAAAGGCGCTGAAAGC
TTTATATCCCACTACGTTCAGATAAAACA	CATTGAGTACATTGGAATATTTGCACCACGTGAATCC
TTTATATCCCACTACGTTCAGATAAAACC	GCCGAGCGAAGTGGAGCGGTAGCGGAACGAAGCGAC
TTTATATCCCACTACGTTCAGATAAAACT	AATGCACAGAAGCAGTATGACTTACTTCGTTCACTC
TTTATATCCCACTACGTTCAGATAAAACA	AGAATTTGTTTAATTATACTTCGCTTGGCAGGGCGTC
TTTATATCCCACTACGTTCAGATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014140.1\|WP_057899894.1\|3207088_3207805_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP014140.1\|WP_057899903.1\|3225177_3228519_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226581
NZ_CP014140.1\|WP_156424101.1\|3218817_3219309_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP014140.1\|WP_057899898.1\|3212560_3214054_+\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_CP014140.1\|WP_057897355.1\|3224252_3225008_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP014140.1\|WP_057899896.1\|3208695_3210522_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP014140.1\|WP_082706109.1\|3219149_3219629_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP014140.1\|WP_057899893.1\|3204873_3207072_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
NZ_CP014140.1\|WP_057899904.1\|3228562_3229723_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341134
NZ_CP014140.1\|WP_057899895.1\|3207808_3208699_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP014140.1\|WP_057899897.1\|3210529_3211255_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187783
NZ_CP014140.1\|WP_057899891.1\|3203367_3204351_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP014140.1\|WP_082706107.1\|3214297_3214477_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP014140.1\|WP_057899900.1\|3220003_3220261_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225822
NZ_CP014140.1\|WP_057899901.1\|3220681_3221716_-\|DUF1835-domain-containing-protein	unknown	unknown	gnl\|CDD\|378075
NZ_CP014140.1\|WP_057899892.1\|3204344_3204860_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP014140.1\|WP_057899905.1\|3229729_3231187_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_CP014140.1\|WP_057899899.1\|3219609_3219933_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP014140.1\|WP_057899890.1\|3203100_3203364_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP014140.1\|WP_156423980.1\|3223071_3224256_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950

Protein	Function_ID	Function_description	E-value
NZ_CP014140.1\|WP_057899894.1\|3207088_3207805_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.04108e-29
NZ_CP014140.1\|WP_057899903.1\|3225177_3228519_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP014140.1\|WP_156424101.1\|3218817_3219309_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.26296e-18
NZ_CP014140.1\|WP_057899898.1\|3212560_3214054_+\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	4.67816e-173
NZ_CP014140.1\|WP_057897355.1\|3224252_3225008_+\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	1.00532e-86
NZ_CP014140.1\|WP_057899896.1\|3208695_3210522_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	3.85e-10
NZ_CP014140.1\|WP_082706109.1\|3219149_3219629_-\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	8.06926e-09
NZ_CP014140.1\|WP_057899893.1\|3204873_3207072_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	6.47429e-70
NZ_CP014140.1\|WP_057899904.1\|3228562_3229723_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341134	cd17245, RMtype1_S_TteMORF1547P-TRD2-CR2_Aco12261I-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Thermoanaerobacter tengcongensis S subunit (S.TteMORF1547P) TRD2-CR2 and Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) TRD1-CR1. The S.Aco12261I S subunit recognizes 5'... GCANNNNNNTGT ... 3', while the recognition sequence is undetermined for S.TteMORF1547P TRD2-CR2. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. S.TteMORF1547P TRD1-CR1 and S.Aco12261I TRD2-CR2 do not belong to this family. This family may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	2.42393e-101
NZ_CP014140.1\|WP_057899895.1\|3207808_3208699_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.18319e-56
NZ_CP014140.1\|WP_057899897.1\|3210529_3211255_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.82844e-25
NZ_CP014140.1\|WP_057899891.1\|3203367_3204351_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.55524e-166
NZ_CP014140.1\|WP_082706107.1\|3214297_3214477_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	0.00131396
NZ_CP014140.1\|WP_057899900.1\|3220003_3220261_-\|hypothetical-protein	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	3.51483e-06
NZ_CP014140.1\|WP_057899901.1\|3220681_3221716_-\|DUF1835-domain-containing-protein	gnl\|CDD\|378075	pfam08874, DUF1835, Domain of unknown function (DUF1835). This family of proteins are functionally uncharacterized.	4.03953e-43
NZ_CP014140.1\|WP_057899892.1\|3204344_3204860_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.38079e-57
NZ_CP014140.1\|WP_057899905.1\|3229729_3231187_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	3.51064e-72
NZ_CP014140.1\|WP_057899899.1\|3219609_3219933_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.41485e-06
NZ_CP014140.1\|WP_057899890.1\|3203100_3203364_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.5967e-27
NZ_CP014140.1\|WP_156423980.1\|3223071_3224256_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30093e-54

>NZ_CP014140.1|WP_082706107.1|3214297_3214477_-|IS3-family-transposase
MAFSNESSSTSRHIYRTREKAKKSLFEYTKIFYNNKRIHSATEYFSPSEYERMYFKKTA
>NZ_CP014140.1|WP_057899898.1|3212560_3214054_+|peptide-MFS-transporter
MSNSNKQKIVSSVPQQGFFGHPKGLFTLSFTEFWERFSYYGMRAILVFYMYYEVSKGGLGLDETTALAIMSIYGSLVYMSSIIGGWLADRIFGTSKAVFYGGILIMFGHIALAIPGNITMFFVSMVLIVLGTGLLKPNVSSIVGDIYSEEDNRRDAGFSIFYMGINLGGFLAPLIVGTVGMKYNFHLGFSIAAVGMFLGLLAFIFTKKKNLGLAGTFVANPLSPAEKKKVFTLIGVGAALIAVLIVIAISMNLLTFDTFIALVGILGIVIPAIYFIVMYRSPKTTAIERSRVIAYIPLFIASVMFWAIQEQGSTILANYADKRTQLDFAGIHISPAWFQSLNPLFIILFAPVFAWLWVKLGSRQPSIPKKFSLGLLFAGLSYIVILLPAYFGGDDSLVNPLWLVLSYLIVVFGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQIVKFYTPKTEMIYFGFIGGAAILFGILLFALSPKIEGYMKGVK
>NZ_CP014140.1|WP_057899897.1|3210529_3211255_-|CRISPR-associated-endoribonuclease-Cas6
MRIVFSLKTKVIPISYRMIIVSLVKECLQQANEKYYRKLYETNQAVLKPFTFAPYLKNFRFAEDEIYLDELVLTFSSPDFEFMLHFYNGLRKVSWFRYKQYEFIRGRVRMLPEQTIRNRSIIVKTQSPLLIEDENRKPVSPERPEFAKHFAYMADTILREYRGKGLRESLIVTPLAMQKKVIKESNHVFTETHGPNRYLYFTTYQGQLRLEGHPEDLQLLYQLGMGKRRGQGFGLVDVIRG
>NZ_CP014140.1|WP_057899896.1|3208695_3210522_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MVLRLYASDWLMSMALVGLQRLYIYGEKHNIIPDEHRGTVRETDSGLEIEPVALGYLPQIFFSYLIDEYSVAERDYERLKNNLKYGKNKERFSDALASIKKTIADSTKKILKYFTDTPAEAALQDIQNRLKEIKHHDQLEELQICIHDYYNVVKQKEINDKLTLNYFKSVILSPFFGQPSFLNVAKNSLDLSGHIDLFYKDYVLPVQNDIQLLEVINKTETGEDVLAFLDEHADYSPFRTLKKAWKKKDIIFIRNYMKEEVPECTLAAGQPAFQNFEEMMFSPLGVSSKNAANFFWDLEKNRALPISSLAKLVLFCVPLGATMYYRKDGFDDQGEVRLYAGFVHTDEKFKEIFQKNEHFKQLKKQSQSFEKIVSRLVRGIRKESEYIMQHLFFLEMSANYQSKRTLLDYYHIPHYLAKYFQEYGEKLEHISPYEYREHFIRNALQGMDTKHVIFKYLRHVIKKGGSGLGVYIAVRERHRIECYKRGEKDMKKQDNRVAAFFNSGRDIRKAFEQAGKARESEDTYSASAGKKVAGIAYRLLNATKANNKDSFMDTLLRVYMSVDKPVPTVFLHAIHEREMDFTTAANAFIAGMLSSENEKQKDREEASV
>NZ_CP014140.1|WP_057899895.1|3207808_3208699_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MTQALTMTIVFEGNSLNYGEGIANISELKKLHRSNGEVYSFASRQSLRYDIVRLGNQWYGWNLDTVAKEKGGVVQFRKDVTINDSVEMDLFGYLKTSQKSEKRPAVVRLSHAISLEPYRGDLEFLNNMGLASRIDQMPNLANIEQHASLYTYTVTVDLSRVGVDGEVELPNEQKAERMRQFLEILKFLNRDIRGRQESLAPLFVIGGVYKAANPFFLGKVQLKQSSEKWEIDTRPLESTMEQTFAGEPVGERTRIGMVSGIFGNEEEYHTTFGDRVVSIEAFFQHIQKEVAAFYGG
>NZ_CP014140.1|WP_057899894.1|3207088_3207805_-|type-I-B-CRISPR-associated-protein-Cas5
MKALRLKLYQETACYKKPLAFKVGETYPLPPYATVKGMLHAMLGANEFIPMRLSIQGTYEAKMVDYQAHYFFKKTDVAEFPLVLDGLASKPYEYEHMTKMPLYMHLLYGVQLLIHVEAVPEVLEAIVAAIENGNTHWSLGRWEDLVRIDEYELVEVKEIEERIRLKYNAYILRDVLNSLETELNAVPYQLNWKYEIKNGIRRWEKIDVGYVLAVSGLEFDADDDVLQDQDGNLIFYNL
>NZ_CP014140.1|WP_057899893.1|3204873_3207072_-|CRISPR-associated-helicase/endonuclease-Cas3
MFYAKTKPVQTIREHTDCLVAELERLKSTYGSRFVHMDERMWKLLRLAVEYHDVGKAWPGFQNRLRKQLGEKKLPNTITYSVPHNYLSVGMIPIKKYKLTKEESRLLIHAVGYHHERSELPDKEKIEEILENEMRPYLPQLIDHMKLDIPETFSYKSIARLSKRYSQFDDDFYKYVLLKGLVHRIDHAASAGVDIELHADKHIGAQVTAYMEHKGYAKNELQQFAEANTDKSIIVIAQTGMGKTEAALLWINEDKGFFTLPLRVSINAIYDRILSPQEINYHPEALGLLHSTSNDYLQEKEELDEKWEDIYRHSRHLSSKLLLTTIDQILKFPFGYRGFEKELAAMANAKVVIDEIQAYEPKIAAMLIKALEMIHKIGGKFMVMTATLPTIYLDELKKRNIITESDVGKFINQDITRHRICLRQEGITEVGEEIIEQAKDTQVLVIVNTVRRAVKMYEQLRKVDPEANVYLLHSQFTQEDRKLLEEEIKSFNKPKPGEPRRSGVWVTTQLVEASLDIDFDYLYTEISTLDSFFQRLGRCYRNGKRSPVQPNVYVFTEDVAGLGYIYDADLVKKGLALLQPYQGRILDEQAKVEMVQRLYSRESLANTAFLREFEEALHEFDFLDFYEVTGQEAQKKLRDIQTVQVIPECFFDEIFDLVKEYEKCQVDWKRRQEIRRKIEAKSIGVYRFQAEDKLSTLSGLDNIFILHCGYEFDRESRQGRGIVSDIEITMFS
>NZ_CP014140.1|WP_057899892.1|3204344_3204860_-|CRISPR-associated-protein-Cas4
MVEADIKGLQVHYYSVCQRKLWLFSKGITMEQTNDRVMEGKMLHERAYPQLEQKEILIDDTFKIDAFDGEYVREVKISSKMGEADRMQMLYYLYQLKQRGVEKKGLISYTKERDTEVVELTEAEEAKVIEALAGIKRILQRPRPPGLKKLRYCSKCAYYEFCFAMERDEEC
>NZ_CP014140.1|WP_057899891.1|3203367_3204351_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MLKDHYIFSTGRLQRKDNTLYFVDAEGKKKSLPIEQIENLHIFGQVDVNSALLNLLAQYGVCLHFYNYHDYYVGTFYPREKNVSGYTVVQQSVHYLNREKRLYLARSFLYGGIHHMLRNLRRHKEKTEEIIRAIEKEAAKLEDTAKIPELMGIEGRIRQEYYQAFNVMLKPEFAFEKRTKRPPTDPLNALISFGNSRMYTEILSEMYKTMLDPTISFLHEPSSKRFSLSLDLAEIFKPLLVDTLIASLVNNRVITLKHFDEMEGIVFLNEEGRKKFLAEWEKKLETTVQHRTLKRKVSYRYFIRLECYKLIKHFIGDTLYKPLKAWW
>NZ_CP014140.1|WP_057899890.1|3203100_3203364_-|CRISPR-associated-endonuclease-Cas2
MFVIVTYDVGEKRVHKVCKKLKQYLMWTQNSVFEGEITKGKLVKCLTELEKIMDKREDSIYVYEVQNPRNIVKRVYGQEKSFEEMFL
>NZ_CP014140.1|WP_156424101.1|3218817_3219309_-|DDE-type-integrase/transposase/recombinase
MRVYREDRFFFIQSVLDVYDRSVIAYHMGLSCEAKDASRTIQQALFKRQLFGIDTLPVLRSDNGPQFTSHHFTQACETFGIVHERIPPRTPNMNGHIEAFHRILEDECLARYEFMSYAESYQVVTDIRFYNERRIHSSICDLAPQEFYALQTERKFVIREVRV
>NZ_CP014140.1|WP_082706109.1|3219149_3219629_-|IS3-family-transposase
MEPVKSEGRAIPGYSLKQDGTKVSDEQIKEWLMEGMEGEAYAYGYRKLTVFLRRTYGLCINKKKVYRLCKEMDILRPQRQKRDSYSKKLARNRIITGSNQLFETDIKYGYIEKTASFSSSPFWTYMTVRSLRIIWVCPVRQRMRVVRYNRHYLNGNYLE
>NZ_CP014140.1|WP_057899899.1|3219609_3219933_-|transposase
MTRRKYSIDFKKQVVKEAKETGNLAAVARRYELSANMVGRWKREFESGKHGEIDFSMVPVLDAEEVVKENEQLKRLLGEQALELAILRDLIILPSKTKRAERGTSEK
>NZ_CP014140.1|WP_057899900.1|3220003_3220261_-|hypothetical-protein
MDHLIALDACASPKLERAKLEYEWEQFISGNNTSPSIRPLIYDSWKRCLEQNVNPFQSKTFIRLSKEQIEEYLSTNLLYRILKPL
>NZ_CP014140.1|WP_057899901.1|3220681_3221716_-|DUF1835-domain-containing-protein
MIENLKKIIDDLPEKEAKTLLYHIFLRMNLVEETQYSQEQFFTDMSKTYKQILNYKVNQMHNKENKPYKKVHIIFGVSASGSLRMVLKESGVSGEEKVITFSDLFSIGPVWQLHTEEGREARKEWFTEHFRYSEGDSTHYMQHFQTALNEIYSIPSDVPVTIWTGENAHEQTGLRFVLYLLREKINTITIINTAEAYKQHFNRQDTRSLYTGEISTERLQTIYDEIDRLIQPLTIQNRDRLVEEWLRLADTREVLRIWKNGCVESVTEEWCDSYIIQAAQKFHNKQKQKNFMKAARVIGEALGSLEQYVGDEFLEYRLRMLISQNVFEAIGSLEAMRYYSVRLQ
>NZ_CP014140.1|WP_156423980.1|3223071_3224256_+|IS21-family-transposase
MIKELYRKGMSISDIARQLGIDRKTVRKYLGENSPPLKKKRTSRGSKLDRYKDYLHKRMIEDGVFNSEKLYGEIQSLGYTGGRTILKDYIKPFRDTHRAKYTVRYETLPGEQMQVDWKEIGTVILHGEPVKLTMFVAVLGYSRMKYAEVTTSQDQEHLMQCLIHSFKYFGGVPQHILFDNMKTVTDGREQGVVKWNERFAEFASYYSFTPKACKPYRAQTKGKVERAIQYIINSFYVGTSYDSVEDLNQQLLRWLDRVGNRKKNDTTGVSPQERWAEEKLQPILQKADYDTSYRSYRKTHFDGTFSYRGVKWIVDPEYSQKEILVKESLDGQVTAYYQGVRISCKQLHENVIFLPQKQNEKQDIGVGRSQPASHFEVHTRSLSEYDELTGGEMS
>NZ_CP014140.1|WP_057897355.1|3224252_3225008_+|ATP-binding-protein
MMEKIEEYCQRLNLPTICDMWSEAAEQAAKNNVPYSAFLFSLLEAEIAQKHQRTTETLLKLAKLPFRKTLDEFDFSVQTSVDERRIRELMTLSFLKHKENLIFLGPPGIGKTHLAVSIALEAIGQGHKVYFITAQELISQLRKADQEGKLEKKLRTFVKPSLLIVDEMGYMHLEHGSAHYLFQVISRRYERGSIIMTSNKSFGEWGEVLGDPVIATAMLDRLLHHSRIFNMKGESYRLREKKAASRKQKGS
>NZ_CP014140.1|WP_057899903.1|3225177_3228519_-|DEAD/DEAH-box-helicase-family-protein
MLSNFHFLVEKPHYESFTNACLEAEKALIVSPATCAILTRRALELAVKWVYSFDSALKAPYQDNLSSLIHHHGFLSIIDEDLLPLLRYIVKLGNVAVHTNSMITREEAILSLHNLHQFVSWIDYCYSDEYTAADFDESLLQIGEEKRERPEELKDLYERLSSKDKRLEEMMKENEQLRALLTAKREANTKEYDFQVDESSEFETRKKYIDLDLKLAGWEFKKDVVIEYPVVGMPNQEGIGYVDYVLFGDNGKPLAVIEAKRTTADPNKGKQQAKLYADCIEKMYGQRPIIFYTNGFETNIWDDLNYPARKISGFYNKEELRLLIDRRTMNLPLKNVKINDNITNRYYQKEAVLAVCDALEKKRRKALLVMATGSGKTRTAISIVDVLTRHNWVKNILFLADRKTLVTQAKNNFSHLLPNLTLCNLLDNKDNPEESRMVFSTYPTMMNAIDEAKRKDGKRLFTVGHFDLIIVDESHRSIYKKYRAIFHYFDAMLLGLTATPKDEIDRNTYEVFDLENGVPTYAYELDQAVQDGYLVDYRTIETKLKFLEEGIHYDDLSEEEKERYEETFDDEVGEDIDSAALNEWLFNDDTIDTVLKNLMEKGIRVEGGDKLGKTIIFAKNHRHAERIVQRFDQLFPEYKGGFARVIDYSVNYYQTLIDDFSDRNKLLQIAVSVDMLDTGVDIPEVVNLVFFKKVRSKSKFWQMIGRGTRLCKDLLGIDQDKTHFLIFDYCGNFEFFRENPKGIEGKAVESLTERLFNSKVEIIKELQHLQYQEEEYIAHRNEFIDEVLAEINKLNEENFRVRQHIQYVHKFKNRAKWDSLAAMDVNEIKKYISPLIVPLNDDEFAKRFDLLMYTIELAKLQTKNATKPIKSVIRTAEALSRLGSIPQVVEQKYIIEKVQTEEFWSEADIFELETVREALRDLVKFLEKETQKIYYTNFKDEILEVKENGPMFDVNDLQSYRKKVHHYLHEHRDQIAIYKLRNNKKLTAQDLKALEEILWNELGTKEDYQKEFGETPVTKLVRQIVGLDPQAANEAFSEFLSSERLNINQSRFVKLIIDYFVRNGVMDKKVLQEEPFKTAGGIVELFKDNMDDARKIIRIIDEINKNSEDIVGA
>NZ_CP014140.1|WP_057899904.1|3228562_3229723_-|restriction-endonuclease-subunit-S
MTAIKYKRVSEVCEIIMGQSPSSDTYNNRKEGLPFFQGKADFGKLYPTPKIYCSAPLKIANKNDILMSVRAPVGDVNIANTKCCIGRGLAAIRANNDMINYKYLFYALNYKKNEIENMGTGSTFKAISKKDIENIKIPVSDIENQIKILKALDKAQELIDKRKAQIEALDQLTQSVFLEMFGDPVQNSLGFKTEPLHELCVHIFGGGTPSKSNPEYYIGNIPWVTPKDMKDIVINDSIDHINEDAIANSSAKLIPPNSLLMVIRSGILKKKLPIAINTREVTVNQDMKAFVVDKNKITVEYLLYFFEFYQKVLLNRVRSVTADNLDFQQIKEILVPVPAINKQKEFSNIFYKVLAEKNKCLQQLNELENNFNSLMQRAFKGELFSD
>NZ_CP014140.1|WP_057899905.1|3229729_3231187_-|SAM-dependent-DNA-methyltransferase
MITGELKNKVDKIWETFWTGGITNPLTVIEQFTYLLFIKGLDEVEAKNEQEAGLLGIDFEPIFPEDKQHLRWSKFKNLEATQMYEIVSKEVFSFIKNLHGNKDSAYAKYMNDAIFMIPTPQMLSKIVDGIDNIPMKDRDTQGDLYEYLLSKIATAGTNGQFRTPRHIIKMIVELVKPTPEDIIVDPAAGSAGFLVAAGEYLRDKRSDLFLVQSLKEHFNNHMFHGFDMDRTMLRIGAMNMMLHGIENPNIEYRDSLSEQNKDKDKYTLVLANPPFKGSLDYDAVSSDLLKISKTKKTELLFLALFLRILKTGGRCACIVPDGVLFGSSKAHKDIRKEIVENHKLEAIISMPSGVFKPYAGVSTAIMIFTKTGAGGTDQVWFYDMKADGYSLDDKRNPIEENDIPDILARFNNLEVEKERKRTEQSFFVPVEEIRENDYDLSINKYKEIEYEEIQYEAPGAILEKVEALEKEIMQGLQELKEMIRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014140_6	6.27\|3216948\|35\|NZ_CP014140\|CRISPRCasFinder,CRT	3216948-3216982	35	NZ_CP013003	Caulobacter henricii strain CB4 plasmid pCB4, complete sequence	89917-89951	9	0.743
NZ_CP014140_6	6.77\|3216949\|35\|NZ_CP014140\|PILER-CR	3216949-3216983	35	NZ_CP013003	Caulobacter henricii strain CB4 plasmid pCB4, complete sequence	89917-89951	9	0.743
NZ_CP014140_6	6.13\|3216023\|35\|NZ_CP014140\|CRISPRCasFinder,CRT	3216023-3216057	35	MK448821	Streptococcus phage Javan623, complete genome	22293-22327	10	0.714
NZ_CP014140_6	6.13\|3216023\|35\|NZ_CP014140\|CRISPRCasFinder,CRT	3216023-3216057	35	MK448822	Streptococcus phage Javan629, complete genome	25197-25231	10	0.714
NZ_CP014140_6	6.63\|3216024\|35\|NZ_CP014140\|PILER-CR	3216024-3216058	35	MK448821	Streptococcus phage Javan623, complete genome	22293-22327	10	0.714
NZ_CP014140_6	6.63\|3216024\|35\|NZ_CP014140\|PILER-CR	3216024-3216058	35	MK448822	Streptococcus phage Javan629, complete genome	25197-25231	10	0.714
NZ_CP014140_3	3.16\|1751521\|34\|NZ_CP014140\|PILER-CR,CRISPRCasFinder,CRT	1751521-1751554	34	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	915335-915368	12	0.647

1. spacer 6.27|3216948|35|NZ_CP014140|CRISPRCasFinder,CRT matches to NZ_CP013003 (Caulobacter henricii strain CB4 plasmid pCB4, complete sequence) position: , mismatch: 9, identity: 0.743

cgggcaagacgcatgaagccgcccgcagtaagcac	CRISPR spacer
tgggcgagacgcgtgaagccgcccgcgagatgatc	Protospacer
.****.******.*************.. * *  *

2. spacer 6.77|3216949|35|NZ_CP014140|PILER-CR matches to NZ_CP013003 (Caulobacter henricii strain CB4 plasmid pCB4, complete sequence) position: , mismatch: 9, identity: 0.743

cgggcaagacgcatgaagccgcccgcagtaagcac	CRISPR spacer
tgggcgagacgcgtgaagccgcccgcgagatgatc	Protospacer
.****.******.*************.. * *  *

3. spacer 6.13|3216023|35|NZ_CP014140|CRISPRCasFinder,CRT matches to MK448821 (Streptococcus phage Javan623, complete genome) position: , mismatch: 10, identity: 0.714

tttagaaatagaagtatctaaaccaggttcagcag	CRISPR spacer
tgcaaaattagaagtatctaaaccaagttcgatga	Protospacer
* .*.** *****************.****.....

4. spacer 6.13|3216023|35|NZ_CP014140|CRISPRCasFinder,CRT matches to MK448822 (Streptococcus phage Javan629, complete genome) position: , mismatch: 10, identity: 0.714

tttagaaatagaagtatctaaaccaggttcagcag	CRISPR spacer
tgcaaaattagaagtatctaaaccaagttcgatga	Protospacer
* .*.** *****************.****.....

5. spacer 6.63|3216024|35|NZ_CP014140|PILER-CR matches to MK448821 (Streptococcus phage Javan623, complete genome) position: , mismatch: 10, identity: 0.714

tttagaaatagaagtatctaaaccaggttcagcag	CRISPR spacer
tgcaaaattagaagtatctaaaccaagttcgatga	Protospacer
* .*.** *****************.****.....

6. spacer 6.63|3216024|35|NZ_CP014140|PILER-CR matches to MK448822 (Streptococcus phage Javan629, complete genome) position: , mismatch: 10, identity: 0.714

tttagaaatagaagtatctaaaccaggttcagcag	CRISPR spacer
tgcaaaattagaagtatctaaaccaagttcgatga	Protospacer
* .*.** *****************.****.....

7. spacer 3.16|1751521|34|NZ_CP014140|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 12, identity: 0.647

ttagcgtactgccccacaatgtcgcgggcatgtc	CRISPR spacer
ccctgaagctgccccagcatgtcgcgggcatggg	Protospacer
..   . .********  **************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

236120 : 248572

Enterobacteria_phage(66.67%)

transposase,integrase,tRNA

attL 237926:237940|attR 252492:252506

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057897354.1\|236120_237791_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
237926:237940	attL	NA	NA	NA	NA
WP_057897355.1\|238194_238950_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	5.8e-59	46.5
WP_156423980.1\|238946_240131_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	7.0e-59	38.1
WP_057897357.1\|240840_241428_-	hypothetical protein	NA	NA	NA	NA
WP_139184971.1\|241517_241796_-	hypothetical protein	NA	NA	NA	NA
WP_057897358.1\|241845_242157_+\|transposase	transposase	NA	NA	NA	NA
WP_082705832.1\|242374_242746_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_057897360.1\|243207_243402_-	hypothetical protein	NA	NA	NA	NA
WP_057897361.1\|243798_245034_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_057897362.1\|245193_245970_-	recombinase family protein	E5DV73	Deep-sea_thermophilic_phage	1.6e-19	30.5
WP_099421478.1\|246478_246838_-\|transposase	transposase	NA	NA	NA	NA
WP_057900201.1\|246834_247134_-	hypothetical protein	NA	NA	NA	NA
WP_057897358.1\|248260_248572_+\|transposase	transposase	NA	NA	NA	NA
252492:252506	attR	NA	NA	NA	NA

DBSCAN-SWA_2

439419 : 499554

Streptococcus_phage(21.05%)

transposase,integrase

attL 437244:437260|attR 506579:506595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
437244:437260	attL	NA	NA	NA	NA
WP_057897530.1\|439419_440376_+\|transposase	transposase	A0A0A8WI33	Clostridium_phage	4.0e-41	30.6
WP_082705849.1\|440595_443082_+	ATP-binding protein	NA	NA	NA	NA
WP_057897531.1\|443221_444475_+	argininosuccinate synthase	NA	NA	NA	NA
WP_057900211.1\|444566_445991_+	argininosuccinate lyase	NA	NA	NA	NA
WP_057900212.1\|446211_446898_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	4.2e-24	35.7
WP_057897532.1\|446887_447781_+	ABC transporter permease	NA	NA	NA	NA
WP_057897533.1\|447808_449026_+	M23 family metallopeptidase	A8ATH6	Listeria_phage	2.3e-17	44.1
WP_091261178.1\|449108_450569_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	5.3e-24	30.5
WP_057897534.1\|450732_452049_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_057897535.1\|452045_452276_+	DUF2198 family protein	NA	NA	NA	NA
WP_057897536.1\|452502_454491_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_057900214.1\|454499_457364_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.2
WP_057897537.1\|457553_458486_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_057897538.1\|458508_459336_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_057897539.1\|459372_460029_+	pyrophosphatase PpaX	NA	NA	NA	NA
WP_057897540.1\|460039_460528_+	acyltransferase	NA	NA	NA	NA
WP_156423987.1\|460721_460934_+	hypothetical protein	NA	NA	NA	NA
WP_082705850.1\|460934_461342_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_057897543.1\|461589_462297_-	hypothetical protein	O64048	Bacillus_phage	1.4e-35	37.1
WP_057897544.1\|464129_465305_+	ATP phosphoribosyltransferase regulatory subunit	A0A1V0SLE3	Klosneuvirus	1.2e-13	22.1
WP_091261164.1\|465292_465940_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_057900216.1\|465946_467221_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_057897545.1\|467235_467820_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_057897546.1\|467819_468443_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_057897547.1\|468469_469207_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_057897548.1\|469207_470005_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_057897549.1\|469985_470642_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA
WP_057897550.1\|471691_473392_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_057897551.1\|473615_474575_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.4e-94	57.0
WP_156423988.1\|474955_475354_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	4.6e-47	69.3
WP_057897553.1\|475365_476472_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	2.6e-84	50.0
WP_057897554.1\|476643_477528_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-05	28.6
WP_057897555.1\|477537_478503_+	YvcK family protein	A1IMD5	Streptococcus_phage	8.7e-60	39.8
WP_057897556.1\|478515_479457_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	6.8e-49	38.6
WP_057897557.1\|479523_479784_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_057897558.1\|479857_480463_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.6e-54	57.9
WP_057897559.1\|480904_481147_+	hypothetical protein	NA	NA	NA	NA
WP_162264988.1\|481181_482024_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_057897561.1\|482166_482499_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_057897562.1\|482804_484208_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_082705851.1\|484176_484545_+	glutaredoxin family protein	NA	NA	NA	NA
WP_057897563.1\|484682_485720_+	hypothetical protein	NA	NA	NA	NA
WP_057897564.1\|485766_486771_+	ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_057897565.1\|486967_488149_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_057897566.1\|488164_488926_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_057897567.1\|488931_490464_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_057897568.1\|490494_491781_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.1e-166	70.0
WP_057897569.1\|491948_492383_+	transcriptional repressor	NA	NA	NA	NA
WP_057897570.1\|492462_492696_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_057897571.1\|492796_493522_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_057897572.1\|493511_494264_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_057897573.1\|494295_496626_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.8e-95	41.2
WP_057897574.1\|496839_497304_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	3.4e-46	61.1
WP_082705853.1\|498043_498460_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	3.4e-21	40.9
WP_057897575.1\|498459_499554_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A068A1P5	Thermus_phage	2.2e-75	41.0
506579:506595	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1545526 : 1611854

Bacillus_phage(22.58%)

protease,plate,portal,holin,transposase,tail,integrase,capsid,terminase

attL 1545444:1545465|attR 1605461:1605482

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1545444:1545465	attL	NA	NA	NA	NA
WP_057900290.1\|1545526_1546678_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	8.8e-91	48.0
WP_162265007.1\|1547062_1547806_-	ORF6N domain-containing protein	Q3HL19	Bacillus_phage	6.8e-28	44.2
WP_156424120.1\|1547814_1548039_-	helix-turn-helix domain-containing protein	A0A0K2CNL9	Brevibacillus_phage	8.3e-14	56.5
WP_057898462.1\|1548203_1548719_+	helix-turn-helix transcriptional regulator	S5MTW4	Brevibacillus_phage	3.2e-16	37.3
WP_057898463.1\|1548978_1549206_+	hypothetical protein	NA	NA	NA	NA
WP_057898465.1\|1549664_1550063_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	4.0e-51	72.0
WP_057898466.1\|1550074_1551187_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.4e-85	51.3
WP_057898467.1\|1551464_1551971_-	hypothetical protein	NA	NA	NA	NA
WP_057898468.1\|1552210_1554697_+	N-6 DNA methylase	A0A096XEP0	Escherichia_phage	6.5e-75	47.1
WP_156424121.1\|1554847_1555036_+	hypothetical protein	NA	NA	NA	NA
WP_162265008.1\|1555181_1556594_-	DUF3578 domain-containing protein	NA	NA	NA	NA
WP_057898469.1\|1556857_1557457_-	hypothetical protein	NA	NA	NA	NA
WP_057898470.1\|1557456_1558113_-	hypothetical protein	NA	NA	NA	NA
WP_057898471.1\|1558072_1559248_-	hypothetical protein	NA	NA	NA	NA
WP_162265009.1\|1559583_1562142_+	hypothetical protein	NA	NA	NA	NA
WP_057898473.1\|1562160_1562640_+	hypothetical protein	NA	NA	NA	NA
WP_057898474.1\|1562806_1563373_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_057898475.1\|1563441_1563783_-	helix-turn-helix transcriptional regulator	A0A1L2JY18	Aeribacillus_phage	1.7e-05	29.9
WP_057898476.1\|1563941_1564181_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_057900292.1\|1564212_1564422_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_057898477.1\|1564458_1564725_+	hypothetical protein	NA	NA	NA	NA
WP_057898478.1\|1564774_1565272_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_057898479.1\|1565401_1565671_+	hypothetical protein	NA	NA	NA	NA
WP_057898480.1\|1565838_1566069_+	hypothetical protein	NA	NA	NA	NA
WP_057898481.1\|1566065_1566434_-	hypothetical protein	NA	NA	NA	NA
WP_057898482.1\|1566732_1566981_-	hypothetical protein	NA	NA	NA	NA
WP_156424009.1\|1567070_1567406_+	hypothetical protein	NA	NA	NA	NA
WP_057898484.1\|1567506_1568262_+	PD-(D/E)XK nuclease family protein	A0A1U9WQL2	Geobacillus_phage	1.2e-64	49.8
WP_057898485.1\|1568413_1569355_+	hypothetical protein	A6M982	Geobacillus_virus	6.2e-26	43.4
WP_057898486.1\|1569412_1570399_+	hypothetical protein	NA	NA	NA	NA
WP_156424010.1\|1570337_1571204_+	ATP-binding protein	D2XQ17	Bacillus_virus	6.2e-57	43.0
WP_057898487.1\|1571301_1571481_+	hypothetical protein	NA	NA	NA	NA
WP_057898488.1\|1571473_1571956_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_057898489.1\|1571952_1572309_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_082705948.1\|1572305_1573070_+	hypothetical protein	A0A290FZK7	Caldibacillus_phage	4.4e-30	46.5
WP_162265010.1\|1573045_1573207_+	hypothetical protein	NA	NA	NA	NA
WP_057898491.1\|1573285_1573807_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_156424122.1\|1573908_1573962_+	hypothetical protein	NA	NA	NA	NA
WP_057898492.1\|1573958_1574231_+	hypothetical protein	NA	NA	NA	NA
WP_156424013.1\|1574227_1574386_+	hypothetical protein	NA	NA	NA	NA
WP_057898493.1\|1574567_1575026_+	ArpU family transcriptional regulator	D2XR57	Bacillus_phage	7.1e-28	48.0
WP_057898494.1\|1575265_1575463_+	hypothetical protein	NA	NA	NA	NA
WP_156424014.1\|1575510_1576386_+	hypothetical protein	A0A0S2GLF7	Bacillus_phage	3.5e-31	29.6
WP_057898496.1\|1576480_1577263_+	hypothetical protein	NA	NA	NA	NA
WP_057898497.1\|1577383_1577911_+	hypothetical protein	NA	NA	NA	NA
WP_156424015.1\|1578085_1578262_+	hypothetical protein	NA	NA	NA	NA
WP_057898498.1\|1578345_1579002_+	hypothetical protein	NA	NA	NA	NA
WP_057898499.1\|1579058_1580354_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	6.8e-92	44.9
WP_057898500.1\|1580500_1580737_+	hypothetical protein	NA	NA	NA	NA
WP_057898501.1\|1580782_1581670_+	hypothetical protein	D2IZ90	Enterococcus_phage	3.6e-36	42.4
WP_057898502.1\|1581650_1583042_+\|terminase	terminase	G1JWB7	Mycobacterium_phage	2.6e-28	26.5
WP_057898503.1\|1583057_1584584_+\|portal	phage portal protein	I1TJV4	Clostridium_phage	1.3e-33	24.8
WP_057898504.1\|1584580_1585489_+\|capsid	minor capsid protein	S5M601	Brevibacillus_phage	2.3e-14	26.6
WP_156424123.1\|1585564_1585774_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_057898506.1\|1585751_1586417_+	hypothetical protein	NA	NA	NA	NA
WP_057898507.1\|1586431_1587388_+\|capsid	phage major capsid protein	A0A2H4JCG0	uncultured_Caudovirales_phage	6.4e-55	41.8
WP_057900294.1\|1587541_1587877_+	hypothetical protein	NA	NA	NA	NA
WP_057898508.1\|1587864_1588257_+	hypothetical protein	NA	NA	NA	NA
WP_057898509.1\|1588256_1588802_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_057898510.1\|1588794_1589256_+	hypothetical protein	NA	NA	NA	NA
WP_057898511.1\|1589252_1589450_+	hypothetical protein	NA	NA	NA	NA
WP_057898512.1\|1589450_1590887_+\|tail	phage tail protein	A0A0A8WI77	Clostridium_phage	7.4e-31	28.0
WP_057898513.1\|1590898_1591300_+	hypothetical protein	NA	NA	NA	NA
WP_057898514.1\|1591321_1591750_+	hypothetical protein	NA	NA	NA	NA
WP_057898516.1\|1591949_1594478_+\|tail	phage tail protein	W0LIX1	Mycobacterium_phage	2.2e-14	28.9
WP_057898517.1\|1594498_1595125_+	hypothetical protein	A0A2H4J2N2	uncultured_Caudovirales_phage	5.7e-28	39.6
WP_057898518.1\|1595133_1596126_+	hypothetical protein	NA	NA	NA	NA
WP_057898519.1\|1596122_1596590_+	DUF2577 family protein	NA	NA	NA	NA
WP_057898520.1\|1596586_1597021_+	DUF2634 domain-containing protein	A0A0N7ACH4	Bacillus_phage	3.0e-12	33.8
WP_057898521.1\|1597017_1598127_+\|plate	baseplate J/gp47 family protein	A0A090D841	Clostridium_phage	2.0e-36	28.7
WP_057898522.1\|1598123_1598774_+	DUF2313 domain-containing protein	J9QE20	Clostridium_phage	9.9e-07	25.3
WP_057900295.1\|1598792_1599098_+	hypothetical protein	NA	NA	NA	NA
WP_057898523.1\|1599097_1599859_+	hypothetical protein	NA	NA	NA	NA
WP_057898524.1\|1599858_1600734_+	hypothetical protein	NA	NA	NA	NA
WP_057898525.1\|1600747_1601104_+	hypothetical protein	NA	NA	NA	NA
WP_156424016.1\|1601105_1601243_+	hypothetical protein	NA	NA	NA	NA
WP_057898526.1\|1601563_1601989_+\|holin	phage holin family protein	S6AVT9	Thermus_phage	1.5e-32	54.7
WP_082705949.1\|1602047_1602860_+	hypothetical protein	A0A127AWA8	Bacillus_phage	1.5e-44	60.0
WP_156424017.1\|1602998_1603154_+	hypothetical protein	NA	NA	NA	NA
WP_057898528.1\|1603390_1603624_+	helix-turn-helix domain-containing protein	A0A1Z1LZP5	Bacillus_phage	1.2e-15	62.5
WP_057898532.1\|1606063_1606684_+	hypothetical protein	NA	NA	NA	NA
1605461:1605482	attR	NA	NA	NA	NA
WP_057898533.1\|1606779_1607250_-	hypothetical protein	NA	NA	NA	NA
WP_162265011.1\|1607730_1608255_+	hypothetical protein	NA	NA	NA	NA
WP_156424018.1\|1608324_1608462_-	hypothetical protein	NA	NA	NA	NA
WP_057898535.1\|1608797_1609082_+\|transposase	transposase	NA	NA	NA	NA
WP_082706172.1\|1610663_1611179_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_082705950.1\|1611318_1611492_+	DUF3850 domain-containing protein	C1KFE1	Lactobacillus_virus	4.9e-06	49.0
WP_057898538.1\|1611473_1611854_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	2.4e-21	49.0

DBSCAN-SWA_4

1680108 : 1782459

114

Bacillus_phage(19.44%)

protease,plate,tRNA,portal,holin,coat,transposase,integrase,capsid,terminase

attL 1684801:1684832|attR 1751819:1751850

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162265014.1\|1680108_1680261_+\|transposase	transposase	NA	NA	NA	NA
WP_139184912.1\|1680294_1680462_+	Spo0E family sporulation regulatory protein-aspartic acid phosphatase	NA	NA	NA	NA
WP_082706174.1\|1680527_1680914_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0T6A8	Bacillus_phage	4.0e-16	51.6
WP_057898601.1\|1681094_1681619_+	hypothetical protein	NA	NA	NA	NA
WP_057898602.1\|1681900_1682266_+	hypothetical protein	NA	NA	NA	NA
WP_057898603.1\|1682804_1683197_+	ArpU family transcriptional regulator	A0A0K2CYZ6	Paenibacillus_phage	4.7e-28	51.5
WP_057898604.1\|1683345_1683918_+	hypothetical protein	NA	NA	NA	NA
WP_057898605.1\|1684038_1684308_+	2TM domain-containing protein	NA	NA	NA	NA
1684801:1684832	attL	NA	NA	NA	NA
WP_057898607.1\|1686378_1687440_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_057898608.1\|1687812_1688862_+	hypothetical protein	A0A0A8WF62	Clostridium_phage	1.4e-18	42.5
WP_057898609.1\|1688985_1689309_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_057898610.1\|1689969_1691736_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_156424022.1\|1691732_1691903_+	hypothetical protein	NA	NA	NA	NA
WP_057898611.1\|1692260_1693385_+	hypothetical protein	NA	NA	NA	NA
WP_057898612.1\|1693381_1694623_+	Zn-dependent hydrolase	NA	NA	NA	NA
WP_057898613.1\|1694643_1695960_+	hypothetical protein	NA	NA	NA	NA
WP_057897355.1\|1696079_1696835_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	5.8e-59	46.5
WP_156423980.1\|1696831_1698016_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	7.0e-59	38.1
WP_057898614.1\|1698146_1698899_+	serine hydrolase	NA	NA	NA	NA
WP_057898615.1\|1699044_1700343_+	hypothetical protein	NA	NA	NA	NA
WP_057898616.1\|1700662_1702369_+	chemoreceptor protein	A0A2H4J162	uncultured_Caudovirales_phage	2.7e-19	41.2
WP_156424024.1\|1702648_1702858_-	hypothetical protein	NA	NA	NA	NA
WP_057898618.1\|1703138_1703573_+	DUF2935 domain-containing protein	NA	NA	NA	NA
WP_057898619.1\|1703611_1705327_-	PucR family transcriptional regulator	NA	NA	NA	NA
WP_057898620.1\|1705497_1706967_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_057898621.1\|1706983_1708342_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	2.8e-19	25.3
WP_139184910.1\|1708626_1709274_+	hypothetical protein	NA	NA	NA	NA
WP_057898623.1\|1709441_1710437_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_057898624.1\|1710658_1711042_+	hypothetical protein	NA	NA	NA	NA
WP_057898625.1\|1711413_1712391_+	glutaminase	NA	NA	NA	NA
WP_057898626.1\|1712468_1713056_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_082706175.1\|1713147_1713546_+	DUF5367 family protein	NA	NA	NA	NA
WP_057898628.1\|1714122_1715289_-\|integrase	site-specific integrase	A0A1Q1PVS7	Staphylococcus_phage	1.6e-36	33.1
WP_057898629.1\|1715562_1715988_-	ImmA/IrrE family metallo-endopeptidase	Q9T201	Bacillus_phage	4.7e-34	54.0
WP_057898630.1\|1716238_1717207_-	hypothetical protein	NA	NA	NA	NA
WP_057898631.1\|1717226_1717679_-	helix-turn-helix transcriptional regulator	A6XML9	Bacillus_virus	7.0e-28	48.1
WP_057898632.1\|1717803_1718040_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_057898633.1\|1718053_1718290_+	hypothetical protein	NA	NA	NA	NA
WP_057898634.1\|1718273_1718534_-	hypothetical protein	NA	NA	NA	NA
WP_162265015.1\|1718609_1719341_+	hypothetical protein	O48505	Lactococcus_phage	3.9e-52	44.8
WP_057898635.1\|1719369_1719708_+	hypothetical protein	NA	NA	NA	NA
WP_057898636.1\|1719834_1720119_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_057898637.1\|1720115_1720439_+	hypothetical protein	NA	NA	NA	NA
WP_057898638.1\|1720804_1721002_+	hypothetical protein	NA	NA	NA	NA
WP_057898639.1\|1721121_1722072_+	hypothetical protein	A0A2H4JA52	uncultured_Caudovirales_phage	1.3e-121	67.9
WP_082705959.1\|1722087_1722975_+	recombinase RecT	A0A2H4JCY8	uncultured_Caudovirales_phage	5.5e-93	64.8
WP_057898640.1\|1723032_1724112_+	hypothetical protein	NA	NA	NA	NA
WP_156424025.1\|1724108_1724303_+	hypothetical protein	NA	NA	NA	NA
WP_057898642.1\|1724286_1724472_+	hypothetical protein	NA	NA	NA	NA
WP_057898643.1\|1724468_1724828_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_091261651.1\|1724824_1725583_+	hypothetical protein	M4ZRI7	Bacillus_phage	3.8e-34	61.8
WP_162265016.1\|1725558_1725720_+	hypothetical protein	NA	NA	NA	NA
WP_057898645.1\|1726293_1726581_+	hypothetical protein	NA	NA	NA	NA
WP_057898646.1\|1726706_1726886_+	hypothetical protein	NA	NA	NA	NA
WP_057898647.1\|1726976_1727360_+	ArpU family transcriptional regulator	A0A2H4J748	uncultured_Caudovirales_phage	1.3e-30	58.9
WP_057898648.1\|1727367_1727736_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_057898649.1\|1728414_1728609_-	hypothetical protein	NA	NA	NA	NA
WP_057898650.1\|1728690_1729293_+	hypothetical protein	NA	NA	NA	NA
WP_057898651.1\|1729362_1729863_+\|terminase	terminase small subunit	A0A2K9V3C4	Faecalibacterium_phage	7.8e-28	52.6
WP_057898652.1\|1729846_1731103_+\|terminase	PBSX family phage terminase large subunit	A0A0K2CP71	Brevibacillus_phage	1.2e-162	68.5
WP_057898653.1\|1731117_1732560_+\|portal	phage portal protein	X5J9Z4	Clostridium_phage	1.2e-108	45.4
WP_057898654.1\|1732556_1733939_+\|capsid	minor capsid protein	A0A090D822	Clostridium_phage	6.9e-66	39.6
WP_057898655.1\|1733931_1734210_+	hypothetical protein	NA	NA	NA	NA
WP_057898656.1\|1734255_1734498_+	hypothetical protein	NA	NA	NA	NA
WP_057898657.1\|1734583_1735177_+	hypothetical protein	Q4ZCE9	Staphylococcus_virus	2.4e-15	60.6
WP_057898658.1\|1735190_1736150_+	hypothetical protein	D2J006	Enterococcus_phage	1.2e-98	57.5
WP_156424027.1\|1736163_1736337_+	hypothetical protein	NA	NA	NA	NA
WP_057898659.1\|1736380_1736722_+	hypothetical protein	NA	NA	NA	NA
WP_057898660.1\|1736718_1737069_+	hypothetical protein	A0A1V0DZW2	Clostridioides_phage	3.0e-10	33.6
WP_057898661.1\|1737068_1737467_+	HK97 gp10 family phage protein	S6B9X8	Thermus_phage	1.9e-08	35.1
WP_057898662.1\|1737463_1737904_+	hypothetical protein	NA	NA	NA	NA
WP_057898663.1\|1737906_1738962_+	hypothetical protein	A0A0A8WJL8	Clostridium_phage	6.4e-72	46.1
WP_057898664.1\|1738975_1739404_+	hypothetical protein	A0A0A7RVT1	Clostridium_phage	6.9e-09	28.4
WP_057898665.1\|1739464_1739872_+	hypothetical protein	NA	NA	NA	NA
WP_057898666.1\|1740027_1742232_+	hypothetical protein	Q9MBI9	Corynebacterium_phage	2.3e-07	24.2
WP_057898667.1\|1742259_1742772_+	hypothetical protein	NA	NA	NA	NA
WP_057898668.1\|1742825_1743659_+	hypothetical protein	A0A2H4J2N2	uncultured_Caudovirales_phage	4.6e-09	28.6
WP_156424028.1\|1743643_1744642_+	hypothetical protein	NA	NA	NA	NA
WP_057898670.1\|1744655_1745099_+	DUF2577 domain-containing protein	NA	NA	NA	NA
WP_057898671.1\|1745095_1745566_+	DUF2634 domain-containing protein	NA	NA	NA	NA
WP_057898672.1\|1745552_1746635_+\|plate	baseplate J/gp47 family protein	A0A2H4J4A0	uncultured_Caudovirales_phage	4.7e-46	35.5
WP_162265017.1\|1746657_1747182_+	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_057898674.1\|1747174_1747684_+	hypothetical protein	NA	NA	NA	NA
WP_057898675.1\|1747683_1748397_+	hypothetical protein	NA	NA	NA	NA
WP_057898676.1\|1748410_1748767_+	hypothetical protein	NA	NA	NA	NA
WP_156424016.1\|1748768_1748906_+	hypothetical protein	NA	NA	NA	NA
WP_057898677.1\|1748976_1749402_+\|holin	phage holin family protein	S6AVT9	Thermus_phage	2.0e-32	54.7
WP_082705960.1\|1749460_1750264_+	hypothetical protein	A0A127AWA8	Bacillus_phage	3.0e-45	60.7
WP_057898679.1\|1752587_1753280_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.3e-37	35.1
1751819:1751850	attR	NA	NA	NA	NA
WP_057898680.1\|1753257_1755477_+	GHKL domain-containing protein	W8CYF6	Bacillus_phage	1.1e-17	26.8
WP_057898681.1\|1755786_1756656_+	carboxyltransferase domain-containing protein	NA	NA	NA	NA
WP_057898682.1\|1756652_1757636_+	biotin-dependent carboxyltransferase	NA	NA	NA	NA
WP_057898683.1\|1757641_1757887_+	biotin carboxyl carrier domain-containing protein	NA	NA	NA	NA
WP_057898684.1\|1757954_1759295_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_082705961.1\|1759321_1760098_+	LamB/YcsF family protein	NA	NA	NA	NA
WP_057898685.1\|1760217_1762284_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_057898686.1\|1762298_1763183_+	carboxyltransferase domain-containing protein	NA	NA	NA	NA
WP_057898687.1\|1763183_1764167_+	biotin-dependent carboxyltransferase	NA	NA	NA	NA
WP_057898688.1\|1764242_1765277_-	NTP transferase domain-containing protein	A0A1D7XFC1	Escherichia_phage	1.0e-29	32.2
WP_057898689.1\|1765293_1766601_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.0e-82	38.6
WP_057898690.1\|1766808_1767906_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_057898691.1\|1768035_1768866_+	hypothetical protein	NA	NA	NA	NA
WP_057898692.1\|1768862_1770110_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_057900303.1\|1770396_1771548_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_057898693.1\|1771547_1772492_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	2.5e-27	30.4
WP_057898694.1\|1772775_1773498_+	glucosaminidase domain-containing protein	G3MB92	Bacillus_virus	1.4e-41	51.2
WP_082705962.1\|1773789_1774359_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_057898696.1\|1774362_1775061_+\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_057898697.1\|1775382_1776396_-	cytochrome D ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_057898698.1\|1776392_1777754_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_057898699.1\|1778373_1778961_+	DUF1641 domain-containing protein	NA	NA	NA	NA
WP_057898700.1\|1779522_1780113_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_057900304.1\|1780184_1781438_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_057898701.1\|1781724_1782459_+\|tRNA	alanyl-tRNA editing protein	NA	NA	NA	NA

DBSCAN-SWA_5

2029908 : 2070077

uncultured_Caudovirales_phage(25.0%)

transposase,integrase

attL 2031795:2031811|attR 2036369:2036385

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057898899.1\|2029908_2030211_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_057898900.1\|2030264_2030552_-\|transposase	transposase	NA	NA	NA	NA
WP_139184927.1\|2030816_2031848_-	hypothetical protein	NA	NA	NA	NA
2031795:2031811	attL	NA	NA	NA	NA
WP_057898902.1\|2031902_2032682_-	hypothetical protein	NA	NA	NA	NA
WP_156424042.1\|2032803_2032956_-	hypothetical protein	NA	NA	NA	NA
WP_162265022.1\|2033151_2033268_+	hypothetical protein	NA	NA	NA	NA
WP_162265023.1\|2033291_2033957_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0T6A8	Bacillus_phage	5.1e-35	41.6
WP_156424044.1\|2034000_2034144_-	hypothetical protein	NA	NA	NA	NA
WP_057898904.1\|2034845_2036012_+	bis-aminopropyl spermidine synthase family protein	NA	NA	NA	NA
WP_057898905.1\|2036606_2037284_+	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	3.1e-11	28.8
2036369:2036385	attR	NA	NA	NA	NA
WP_057898906.1\|2037396_2038995_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	6.8e-17	25.2
WP_057898907.1\|2039350_2040262_-	DMT family transporter	NA	NA	NA	NA
WP_057898908.1\|2040443_2040935_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_082705993.1\|2040818_2041298_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_057898909.1\|2041364_2041736_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_057898910.1\|2041807_2043055_-	MFS transporter	NA	NA	NA	NA
WP_057898911.1\|2043051_2043747_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_082705994.1\|2044049_2044439_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	2.5e-21	44.9
WP_057898913.1\|2044446_2044827_-	hypothetical protein	NA	NA	NA	NA
WP_057898914.1\|2045095_2047063_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
WP_057900330.1\|2047062_2049111_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_057898915.1\|2049437_2050217_+	hypothetical protein	NA	NA	NA	NA
WP_057898916.1\|2050355_2050556_-	copper chaperone CopZ	NA	NA	NA	NA
WP_091260247.1\|2050588_2050909_-	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_057898918.1\|2050934_2053346_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	7.6e-121	38.7
WP_082706183.1\|2053572_2054610_-	CapA family protein	NA	NA	NA	NA
WP_057898920.1\|2055057_2056230_+	MFS transporter	A0A2H4UVM2	Bodo_saltans_virus	5.3e-11	30.8
WP_057898921.1\|2056559_2057792_-	hypothetical protein	NA	NA	NA	NA
WP_057898922.1\|2057778_2059734_-	AAA domain-containing protein	K4I1H4	Acidithiobacillus_phage	9.8e-26	29.8
WP_057898923.1\|2059746_2062842_-	SMC family ATPase	A8ASU9	Listeria_phage	7.3e-07	27.3
WP_057898924.1\|2062838_2064005_-	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_057898925.1\|2064236_2064443_+	YrzA family protein	NA	NA	NA	NA
WP_156424046.1\|2064552_2064708_-	hypothetical protein	NA	NA	NA	NA
WP_057898926.1\|2064993_2065416_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_057898928.1\|2065633_2066290_-\|transposase	transposase	NA	NA	NA	NA
WP_162265024.1\|2066398_2066722_-\|transposase	transposase	NA	NA	NA	NA
WP_082705997.1\|2066756_2066939_-	hypothetical protein	NA	NA	NA	NA
WP_057898929.1\|2067653_2067842_-	hypothetical protein	NA	NA	NA	NA
WP_057898930.1\|2067854_2068493_-	hypothetical protein	NA	NA	NA	NA
WP_082705998.1\|2068916_2070077_-\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2583516 : 2594454

Staphylococcus_phage(44.44%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057899365.1\|2583516_2584968_-	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	6.0e-12	49.3
WP_057899366.1\|2585236_2585770_-	hypothetical protein	NA	NA	NA	NA
WP_057899367.1\|2585769_2586354_-	nucleoside recognition protein	NA	NA	NA	NA
WP_156424130.1\|2586354_2587422_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	5.9e-25	30.9
WP_057900377.1\|2587609_2588200_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.1e-19	35.4
WP_057899369.1\|2588199_2588955_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.9e-09	42.3
WP_057899370.1\|2588970_2589612_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_057899371.1\|2589754_2590222_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-41	57.0
WP_057899372.1\|2590273_2591467_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.5e-112	52.3
WP_057899373.1\|2591493_2592150_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.7e-38	42.5
WP_057899374.1\|2592154_2593249_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.7e-57	37.6
WP_057899376.1\|2594010_2594454_+	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	7.2e-17	45.0

DBSCAN-SWA_7

2758723 : 2816801

Bacillus_phage(37.5%)

protease,tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057899524.1\|2758723_2759929_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_057899525.1\|2759932_2761087_-	cysteine desulfurase	NA	NA	NA	NA
WP_156424079.1\|2761400_2761553_+	hypothetical protein	NA	NA	NA	NA
WP_139184923.1\|2761610_2762609_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_139184921.1\|2762949_2763297_-	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_057899528.1\|2763335_2763554_-	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_057900389.1\|2763681_2764848_-	amidohydrolase	NA	NA	NA	NA
WP_057899529.1\|2764964_2765705_-	3-oxoacyl-ACP reductase FabG	W8CYX9	Bacillus_phage	2.3e-07	38.0
WP_057899530.1\|2765865_2766654_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	5.2e-10	42.7
WP_057899531.1\|2766745_2766943_+	DUF378 domain-containing protein	NA	NA	NA	NA
WP_156424080.1\|2767003_2767141_-	hypothetical protein	NA	NA	NA	NA
WP_057899532.1\|2767330_2767876_-	glutathione peroxidase	Q70H87	Fowlpox_virus	6.1e-26	38.7
WP_057899533.1\|2768264_2768672_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_057899534.1\|2768802_2769303_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_057900390.1\|2769340_2770186_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_082706066.1\|2770575_2770890_-	4Fe-4S ferredoxin	NA	NA	NA	NA
WP_057899536.1\|2770871_2772167_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_057899537.1\|2772159_2773512_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
WP_057899538.1\|2773513_2774338_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_057899540.1\|2774808_2774988_-	hypothetical protein	NA	NA	NA	NA
WP_057900391.1\|2775189_2776503_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.8e-23	53.5
WP_057899541.1\|2776762_2777122_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_057899542.1\|2777121_2778651_+	cation acetate symporter	NA	NA	NA	NA
WP_057899543.1\|2778913_2781154_-	hypothetical protein	NA	NA	NA	NA
WP_057899544.1\|2781257_2781884_-	forespore capture DNA-binding protein RefZ	NA	NA	NA	NA
WP_057899545.1\|2781916_2782579_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_057899546.1\|2782701_2783694_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_057899547.1\|2783780_2786090_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.3e-20	36.1
WP_057899548.1\|2786121_2786727_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_057899549.1\|2786945_2788142_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_156424081.1\|2788311_2788479_+	hypothetical protein	NA	NA	NA	NA
WP_057899551.1\|2788718_2789315_+	30S ribosomal protein S4	NA	NA	NA	NA
WP_057899552.1\|2789363_2790623_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_057899553.1\|2791028_2793440_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_057900392.1\|2793459_2795175_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	7.2e-206	73.2
WP_057899554.1\|2795461_2796094_+	hypothetical protein	NA	NA	NA	NA
WP_057899555.1\|2796175_2796823_+	CBS domain-containing protein	NA	NA	NA	NA
WP_057899556.1\|2796819_2797977_+	acetoin utilization protein AcuC	NA	NA	NA	NA
WP_057899557.1\|2798009_2798702_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_057899558.1\|2798714_2799749_-	catabolite control protein A	NA	NA	NA	NA
WP_139184920.1\|2799925_2800561_-	hypothetical protein	NA	NA	NA	NA
WP_057899560.1\|2800679_2801771_-	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_057899561.1\|2801965_2804122_+	cell division protein FtsA	NA	NA	NA	NA
WP_057899562.1\|2804239_2804560_-	bacillithiol system redox-active protein YtxJ	NA	NA	NA	NA
WP_082706069.1\|2804674_2805022_-\|coat	spore coat protein	NA	NA	NA	NA
WP_057899564.1\|2805035_2805269_-	hypothetical protein	NA	NA	NA	NA
WP_057899565.1\|2805452_2806532_+	isocitrate dehydrogenase	NA	NA	NA	NA
WP_057899566.1\|2806648_2808181_+	hypothetical protein	NA	NA	NA	NA
WP_057899567.1\|2808446_2808827_-	hypothetical protein	NA	NA	NA	NA
WP_057899568.1\|2808901_2809111_-	hypothetical protein	NA	NA	NA	NA
WP_082706071.1\|2809260_2810064_+\|protease	trypsin-like serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	7.9e-14	31.0
WP_057899569.1\|2810077_2811658_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	3.0e-33	27.3
WP_057899570.1\|2811831_2812458_-	hypothetical protein	NA	NA	NA	NA
WP_057899571.1\|2812561_2812993_-	CBS domain-containing protein	NA	NA	NA	NA
WP_162265040.1\|2813128_2814637_+	DUF4127 family protein	NA	NA	NA	NA
WP_057899573.1\|2814792_2815239_-	hypothetical protein	NA	NA	NA	NA
WP_057899574.1\|2815231_2815465_-	hypothetical protein	NA	NA	NA	NA
WP_057899575.1\|2815710_2815947_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_057899576.1\|2815943_2816204_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_057899577.1\|2816231_2816801_+\|coat	spore coat protein CotJC	NA	NA	NA	NA

DBSCAN-SWA_8

3027898 : 3042004

uncultured_Caudovirales_phage(18.18%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057899749.1\|3027898_3029260_-\|tail	phage tail sheath protein	A0A2H4J187	uncultured_Caudovirales_phage	7.8e-22	29.5
WP_057899750.1\|3029240_3029501_-	hypothetical protein	NA	NA	NA	NA
WP_057899751.1\|3029497_3029980_-	hypothetical protein	NA	NA	NA	NA
WP_057899752.1\|3029976_3030471_-	HK97 gp10 family phage protein	A0A1L6BY07	Clostridium_phage	2.7e-17	35.3
WP_162265046.1\|3030647_3030887_-	hypothetical protein	NA	NA	NA	NA
WP_057899754.1\|3030937_3031159_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_057899755.1\|3031548_3032007_-	ArpU family transcriptional regulator	D2XR57	Bacillus_phage	1.5e-33	52.7
WP_156424095.1\|3032188_3032383_-	hypothetical protein	NA	NA	NA	NA
WP_057899757.1\|3032379_3033324_-	DnaD domain protein	A0A1L2JY26	Aeribacillus_phage	2.1e-26	39.2
WP_057899758.1\|3033328_3033610_-	hypothetical protein	A0A139ZPJ9	Marinitoga_camini_virus	2.0e-12	42.9
WP_057899759.1\|3033724_3033925_-	hypothetical protein	NA	NA	NA	NA
WP_057899760.1\|3034014_3034275_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156424096.1\|3034241_3034454_-	hypothetical protein	NA	NA	NA	NA
WP_057899761.1\|3034509_3034707_-	hypothetical protein	S5M5P9	Brevibacillus_phage	1.3e-10	48.4
WP_057899762.1\|3035233_3035563_-	hypothetical protein	NA	NA	NA	NA
WP_057899763.1\|3035577_3035817_-	helix-turn-helix transcriptional regulator	A8ATX6	Listeria_phage	3.5e-10	47.6
WP_057899764.1\|3035981_3036353_+	helix-turn-helix transcriptional regulator	A0A1L2JY18	Aeribacillus_phage	1.0e-08	37.5
WP_057899765.1\|3036366_3036672_+	hypothetical protein	NA	NA	NA	NA
WP_057899766.1\|3036870_3037404_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	2.5e-08	27.7
WP_057899767.1\|3037486_3039043_+	recombinase family protein	A0A0K2CNN5	Brevibacillus_phage	2.6e-186	64.4
WP_062731162.1\|3040105_3042004_-	PrkA family serine protein kinase	A0MN77	Thermus_phage	1.6e-105	36.2

DBSCAN-SWA_9

3189445 : 3224256

Acinetobacter_phage(50.0%)

bacteriocin,integrase,transposase

attL 3187208:3187224|attR 3222665:3222681

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3187208:3187224	attL	NA	NA	NA	NA
WP_139184999.1\|3189445_3189577_-\|bacteriocin	subtilosin A family bacteriocin	NA	NA	NA	NA
WP_057899879.1\|3190195_3190582_-	DoxX family protein	NA	NA	NA	NA
WP_139184998.1\|3191262_3191523_-	hypothetical protein	NA	NA	NA	NA
WP_057899880.1\|3191618_3192017_-	hypothetical protein	NA	NA	NA	NA
WP_057899881.1\|3192044_3192452_-	hypothetical protein	NA	NA	NA	NA
WP_057899882.1\|3193261_3194653_-	L-cystine transporter	NA	NA	NA	NA
WP_057899883.1\|3194929_3196261_-	APC family permease	NA	NA	NA	NA
WP_057899884.1\|3196580_3196967_-	hypothetical protein	NA	NA	NA	NA
WP_091261102.1\|3197704_3198346_+	futalosine hydrolase	NA	NA	NA	NA
WP_057899886.1\|3198342_3199182_+	1,4-dihydroxy-6-naphthoate synthase	NA	NA	NA	NA
WP_057899887.1\|3200297_3200792_-	hypothetical protein	NA	NA	NA	NA
WP_057899888.1\|3200916_3201615_+	hypothetical protein	NA	NA	NA	NA
WP_162265050.1\|3201800_3202076_-	hypothetical protein	NA	NA	NA	NA
WP_057899890.1\|3203100_3203364_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_057899891.1\|3203367_3204351_-	type I-B CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_057899892.1\|3204344_3204860_-	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_057899893.1\|3204873_3207072_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_057899894.1\|3207088_3207805_-	type I-B CRISPR-associated protein Cas5	NA	NA	NA	NA
WP_057899895.1\|3207808_3208699_-	type I-B CRISPR-associated protein Cas7/Cst2/DevR	NA	NA	NA	NA
WP_057899896.1\|3208695_3210522_-	type I-B CRISPR-associated protein Cas8b1/Cst1	NA	NA	NA	NA
WP_057899897.1\|3210529_3211255_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA
WP_057899898.1\|3212560_3214054_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	3.2e-85	41.4
WP_082706107.1\|3214297_3214477_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_156424101.1\|3218817_3219309_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_082706109.1\|3219149_3219629_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_057899899.1\|3219609_3219933_-\|transposase	transposase	NA	NA	NA	NA
WP_057899900.1\|3220003_3220261_-	hypothetical protein	NA	NA	NA	NA
WP_057899901.1\|3220681_3221716_-	DUF1835 domain-containing protein	NA	NA	NA	NA
WP_156423980.1\|3223071_3224256_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	7.0e-59	38.1
3222665:3222681	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3287563 : 3297693

Prochlorococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057899949.1\|3287563_3289114_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.7e-73	52.6
WP_057899950.1\|3289110_3289758_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.3e-29	39.0
WP_057899951.1\|3289751_3290792_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	9.4e-68	44.1
WP_057900435.1\|3290803_3292219_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.7e-51	31.1
WP_082706211.1\|3292215_3294390_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.0e-174	43.7
WP_057899953.1\|3294427_3295120_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_057899954.1\|3295123_3295372_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A1D7SRI3	Cyanophage	1.5e-08	40.0
WP_057899955.1\|3295364_3296084_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3ELR0	Synechococcus_phage	3.1e-46	42.6
WP_057899956.1\|3296397_3297693_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.7e-18	31.0

DBSCAN-SWA_11

3301970 : 3311752

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057899959.1\|3301970_3303347_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.2e-47	33.3
WP_057900437.1\|3303382_3304921_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.0e-22	31.2
WP_057899960.1\|3305387_3307013_-	chaperonin GroEL	A0A219YK78	uncultured_virus	8.1e-159	59.3
WP_057899961.1\|3307102_3307384_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	3.1e-18	50.0
WP_057899962.1\|3307698_3308490_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	2.4e-15	26.6
WP_057899963.1\|3308548_3309040_-	MogA/MoaB family molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
WP_057899964.1\|3309138_3309732_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_057899965.1\|3309814_3311752_+	ABC-F type ribosomal protection protein	A0A2K9L3Z8	Tupanvirus	3.1e-56	29.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014140

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection