CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013137	Staphylococcus aureus strain XQ chromosome, complete genome	10 crisprs	cas3,DEDDh,DinG,csa3,WYL	4	2	11	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013137_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_1

305580-305719

Orphan

Consensus_repeat	Method
TATGTTGGGGCCCACCCCAACTTGCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP013137_1

>merge|NZ_CP013137|1|305580-305719|CRISPRCasFinder
TATGTTGGGGCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCACCCCAACTTGCATTGTTTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCGCTATAATTGAA

>NZ_CP013137|1|1|305580-305719|CRISPRCasFinder
TATGTTGGGGCCCACCCCAACTTGCA	CATTATTGTAAGCTGACTTTCCGCCAGCTTC
TATGTTGGGGCCCCACCCCAACTTGC	ATTGTTTGTAGAATTTCTTTTCGAAATTCTC
TGTGTTGGGGCCCCGCTATAATTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_001018959.1\|305962_306349_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224572
NZ_CP013137.1\|WP_000569881.1\|300009_300504_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_CP013137.1\|WP_000290491.1\|303936_304317_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP013137.1\|WP_001140691.1\|298581_299163_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP013137.1\|WP_001183850.1\|310574_311426_-\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_CP013137.1\|WP_000168845.1\|311753_312515_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP013137.1\|WP_058007937.1\|302269_302809_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_CP013137.1\|WP_001065801.1\|306341_306638_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP013137.1\|WP_000520233.1\|307905_308601_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP013137.1\|WP_000205572.1\|312612_313920_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP013137.1\|WP_001147955.1\|302958_303279_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP013137.1\|WP_001006454.1\|314025_315276_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP013137.1\|WP_000752917.1\|310146_310341_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP013137.1\|WP_000571211.1\|306887_307913_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP013137.1\|WP_031927536.1\|301470_302187_+\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_CP013137.1\|WP_058007936.1\|300900_301323_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP013137.1\|WP_000932224.1\|304494_305373_+\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|226395
NZ_CP013137.1\|WP_000732334.1\|308618_309440_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP013137.1\|WP_000589549.1\|303422_303779_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP013137.1\|WP_000954354.1\|299235_299853_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_001018959.1\|305962_306349_+\|hypothetical-protein	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	4.28448e-37
NZ_CP013137.1\|WP_000569881.1\|300009_300504_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	4.38838e-47
NZ_CP013137.1\|WP_000290491.1\|303936_304317_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	9.01516e-70
NZ_CP013137.1\|WP_001140691.1\|298581_299163_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.77036e-48
NZ_CP013137.1\|WP_001183850.1\|310574_311426_-\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	1.31099e-76
NZ_CP013137.1\|WP_000168845.1\|311753_312515_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.29081e-150
NZ_CP013137.1\|WP_058007937.1\|302269_302809_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	4.43176e-49
NZ_CP013137.1\|WP_001065801.1\|306341_306638_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	7.01368e-14
NZ_CP013137.1\|WP_000520233.1\|307905_308601_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.67625e-100
NZ_CP013137.1\|WP_000205572.1\|312612_313920_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	8.11734e-136
NZ_CP013137.1\|WP_001147955.1\|302958_303279_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.63533e-24
NZ_CP013137.1\|WP_001006454.1\|314025_315276_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP013137.1\|WP_000752917.1\|310146_310341_+\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	5.95583e-07
NZ_CP013137.1\|WP_000571211.1\|306887_307913_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	3.61125e-170
NZ_CP013137.1\|WP_031927536.1\|301470_302187_+\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	2.15062e-147
NZ_CP013137.1\|WP_058007936.1\|300900_301323_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	9.35263e-60
NZ_CP013137.1\|WP_000932224.1\|304494_305373_+\|DUF1963-domain-containing-protein	gnl\|CDD\|226395	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown].	1.06148e-76
NZ_CP013137.1\|WP_000732334.1\|308618_309440_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	9.86321e-113
NZ_CP013137.1\|WP_000589549.1\|303422_303779_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.06191e-56
NZ_CP013137.1\|WP_000954354.1\|299235_299853_-\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	1.56125e-61

>NZ_CP013137.1|WP_000932224.1|304494_305373_+|DUF1963-domain-containing-protein
MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMQEETLSQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLNDLPEQQELFPVNEGILQFWISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQVHLKSLDADNEDIPFSGAFSIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEPFNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGKSSIIWGDLGIANILVKSTDLEAMKFDDYMYSWDCS
>NZ_CP013137.1|WP_000290491.1|303936_304317_+|glycine-cleavage-system-protein-GcvH
MAVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE
>NZ_CP013137.1|WP_000589549.1|303422_303779_+|arsenate-reductase-family-protein
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
>NZ_CP013137.1|WP_001147955.1|302958_303279_-|thioredoxin-family-protein
MQAIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
>NZ_CP013137.1|WP_058007937.1|302269_302809_+|nitroreductase
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKGRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEEDMPKAPRKNRNLITLY
>NZ_CP013137.1|WP_031927536.1|301470_302187_+|type-I-3-dehydroquinate-dehydratase
MTHVEVVATIAPQLYIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDLYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
>NZ_CP013137.1|WP_058007936.1|300900_301323_-|organic-hydroperoxide-resistance-protein
MAIHYETKAMNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDPDSESPKLSVSIDATIKNVISQEEAEKYLQMSHEFCPYSKATQGNINVDLNVNVVD
>NZ_CP013137.1|WP_000569881.1|300009_300504_-|GNAT-family-N-acetyltransferase
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENEALIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
>NZ_CP013137.1|WP_000954354.1|299235_299853_-|amino-acid-transporter
MLTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGEAQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLIF
>NZ_CP013137.1|WP_001140691.1|298581_299163_+|histidine-phosphatase-family-protein
MAKTLYLMRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYYETKGINFDLYASSTQERASDTLENVAPNHSYQRFKGLKEWHFGLFEGESVYLFDNLYKPEDLFGDRIVPFKGEARQQVEDRIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKLDEALKHNIGNCNILKFEYDNGTFKFVELIDPNL
>NZ_CP013137.1|WP_001018959.1|305962_306349_+|hypothetical-protein
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSECEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPSLPNINNERLVLVNE
>NZ_CP013137.1|WP_001065801.1|306341_306638_+|thioredoxin-family-protein
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
>NZ_CP013137.1|WP_000571211.1|306887_307913_+|methionine-ABC-transporter-ATP-binding-protein
MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGKVIEHGPVTQVFENPQHTVTKRFVKEDLNDDFETSLTELEPLEKDAYIVKLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVLRHG
>NZ_CP013137.1|WP_000520233.1|307905_308601_+|ABC-transporter-permease
MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
>NZ_CP013137.1|WP_000732334.1|308618_309440_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGLILVLTFAVVLAACGNGSKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
>NZ_CP013137.1|WP_000752917.1|310146_310341_+|CsbD-family-protein
MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
>NZ_CP013137.1|WP_001183850.1|310574_311426_-|DUF368-domain-containing-protein
MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTGLIIKYFIAGMCASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIMMWFVSLVVFIIGFIVSLTLGRITAENE
>NZ_CP013137.1|WP_000168845.1|311753_312515_+|Fe-S-cluster-assembly-ATPase-SufC
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE
>NZ_CP013137.1|WP_000205572.1|312612_313920_+|Fe-S-cluster-assembly-protein-SufD
MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK
>NZ_CP013137.1|WP_001006454.1|314025_315276_+|cysteine-desulfurase
MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_2

490515-490611

Orphan

Consensus_repeat	Method
GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013137_2

>merge|NZ_CP013137|2|490515-490611|CRISPRCasFinder
GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGGTAAAAGAGGGATACTTGCGCTGAGCGCATGCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG

>NZ_CP013137|2|2|490515-490611|CRISPRCasFinder
GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG	TAAAAGAGGGATACTTGCGCTGAGCGCAT
GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_031927757.1\|494817_496536_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP013137.1\|WP_000033477.1\|489461_490037_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227065
NZ_CP013137.1\|WP_000483713.1\|481144_482629_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
NZ_CP013137.1\|WP_000273259.1\|487246_488053_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP013137.1\|WP_000505962.1\|493852_494395_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368297
NZ_CP013137.1\|WP_000064214.1\|490620_490755_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000009069.1\|490906_492202_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000921977.1\|488045_489446_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP013137.1\|WP_000685058.1\|492626_493799_+\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP013137.1\|WP_000709282.1\|484233_485712_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP013137.1\|WP_000437472.1\|494548_494815_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NZ_CP013137.1\|WP_000666799.1\|478312_478984_+\|phosphoribosylformylglycinamidine-synthase-I	unknown	unknown	gnl\|CDD\|235140
NZ_CP013137.1\|WP_000030808.1\|482621_483650_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP013137.1\|WP_000514290.1\|499713_500376_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP013137.1\|WP_000032747.1\|478976_481166_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP013137.1\|WP_058007963.1\|485733_486981_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|237507
NZ_CP013137.1\|WP_031927753.1\|483652_484219_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|223376
NZ_CP013137.1\|WP_000381852.1\|497203_498565_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP013137.1\|WP_001289618.1\|496772_497006_-\|glutaredoxin-like-protein-NrdH	unknown	unknown	gnl\|CDD\|239274
NZ_CP013137.1\|WP_000638453.1\|498561_499581_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_000032747.1\|478976_481166_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP013137.1\|WP_031927757.1\|494817_496536_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP013137.1\|WP_000033477.1\|489461_490037_-\|ECF-transporter-S-component	gnl\|CDD\|227065	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism].	4.34592e-70
NZ_CP013137.1\|WP_000483713.1\|481144_482629_+\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
NZ_CP013137.1\|WP_000273259.1\|487246_488053_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.09792e-29
NZ_CP013137.1\|WP_000505962.1\|493852_494395_+\|hypothetical-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	0.00760449
NZ_CP013137.1\|WP_000921977.1\|488045_489446_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	9.64258e-65
NZ_CP013137.1\|WP_000709282.1\|484233_485712_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP013137.1\|WP_000437472.1\|494548_494815_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	2.44795e-51
NZ_CP013137.1\|WP_000666799.1\|478312_478984_+\|phosphoribosylformylglycinamidine-synthase-I	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	1.77638e-140
NZ_CP013137.1\|WP_000030808.1\|482621_483650_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP013137.1\|WP_000514290.1\|499713_500376_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	4.35421e-66
NZ_CP013137.1\|WP_000685058.1\|492626_493799_+\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	3.91211e-146
NZ_CP013137.1\|WP_058007963.1\|485733_486981_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|237507	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP013137.1\|WP_031927753.1\|483652_484219_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|223376	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism].	1.64347e-91
NZ_CP013137.1\|WP_000381852.1\|497203_498565_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	1.81103e-165
NZ_CP013137.1\|WP_001289618.1\|496772_497006_-\|glutaredoxin-like-protein-NrdH	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	1.21197e-16
NZ_CP013137.1\|WP_000638453.1\|498561_499581_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	1.67944e-76

>NZ_CP013137.1|WP_000033477.1|489461_490037_-|ECF-transporter-S-component
MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQLTNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELVFAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVAGVLSYLLVKALDKTGVTKLFRPAAKEDYDNL
>NZ_CP013137.1|WP_000921977.1|488045_489446_-|ABC-transporter-ATP-binding-protein
MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQVPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWENQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHLLSEYGVWHPRAWEFAPSRVDFPTANSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETMQLLKLLDLENVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV
>NZ_CP013137.1|WP_000273259.1|487246_488053_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRYQMIDASNYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDVIFIIVLIAIITLAYYCSINLPITGIDDVRLGRVG
>NZ_CP013137.1|WP_058007963.1|485733_486981_+|phosphoribosylamine--glycine-ligase
MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQGILDFAKQQDVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVVFETFSEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVHDAQRDAYEKVSQIQSDHLFYRHDIANKALQLK
>NZ_CP013137.1|WP_000709282.1|484233_485712_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVPVRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLYPFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDSLDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIAGAKQLHGKQLSYNNIKDADATLALVKKFDTPAAVAVKHMNPCGVGIGDTIEQAFQHAYEADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEIDMTIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVELAAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH
>NZ_CP013137.1|WP_031927753.1|483652_484219_+|phosphoribosylglycinamide-formyltransferase
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKKFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
>NZ_CP013137.1|WP_000030808.1|482621_483650_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGATFDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGAVEKDDYVDGSEVEEGQVVIGLASSGIHSNGYSLVRKLINESGIELASNFDNRPFIDVFLEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIFDWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDVSRALKILAEQNVEAYQIGHIVKNESTAIELLGV
>NZ_CP013137.1|WP_000483713.1|481144_482629_+|amidophosphoribosyltransferase
MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV
>NZ_CP013137.1|WP_000032747.1|478976_481166_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTETGIFSVMWSEHCSYKHSKPFLKQFPTSGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKNYNTSKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTNKAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDFEPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGVLSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSGKTLNIDNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD
>NZ_CP013137.1|WP_000666799.1|478312_478984_+|phosphoribosylformylglycinamidine-synthase-I
MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEELEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKANNQIILKYVNNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSWREQHV
>NZ_CP013137.1|WP_000064214.1|490620_490755_-|hypothetical-protein
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
>NZ_CP013137.1|WP_000009069.1|490906_492202_+|hypothetical-protein
MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP
>NZ_CP013137.1|WP_000685058.1|492626_493799_+|class-I-SAM-dependent-rRNA-methyltransferase
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKLFKTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHVLNLFSYTGAFSVIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>NZ_CP013137.1|WP_000505962.1|493852_494395_+|hypothetical-protein
MGFKNNLTSNLTNKIGNSVFKIENINEKGAMPTTIKELNERRQRAEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVKERVMSAAAIQGSQFIGKRISSAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYFMNKIGKDHIQKCENVIKNVM
>NZ_CP013137.1|WP_000437472.1|494548_494815_+|phosphocarrier-protein-HPr
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
>NZ_CP013137.1|WP_031927757.1|494817_496536_+|phosphoenolpyruvate--protein-phosphotransferase
MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAKFNGAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMNGKRVVVRTLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIELVNNYVK
>NZ_CP013137.1|WP_001289618.1|496772_497006_-|glutaredoxin-like-protein-NrdH
MSEIIVYTQNDCPPCTFVKNYLNEHQIDFEERNINNQQYRNEMIDFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD
>NZ_CP013137.1|WP_000381852.1|497203_498565_+|cytochrome-ubiquinol-oxidase-subunit-I
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGVLYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
>NZ_CP013137.1|WP_000638453.1|498561_499581_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFAISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS
>NZ_CP013137.1|WP_000514290.1|499713_500376_+|TrkA-family-potassium-uptake-protein
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_3

650420-650512

Unclear

Consensus_repeat	Method
TAAGAAACAGTAATCAATAAATTGATAACT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP013137_3

>merge|NZ_CP013137|3|650420-650512|CRISPRCasFinder
TAAGAAACAGTAATCAATAAATTGATAACTAATAAGCGGAACGCCTGAGCTAAAGCTCATGCATAAGAAACAGTAATCAATAAATTGATAACT

>NZ_CP013137|3|3|650420-650512|CRISPRCasFinder
TAAGAAACAGTAATCAATAAATTGATAACT	AATAAGCGGAACGCCTGAGCTAAAGCTCATGCA
TAAGAAACAGTAATCAATAAATTGATAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_000007684.1\|655394_656645_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP013137.1\|WP_000164332.1\|640294_640939_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_CP013137.1\|WP_000181404.1\|660504_660855_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP013137.1\|WP_001548538.1\|647086_647659_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP013137.1\|WP_000517908.1\|641967_642156_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP013137.1\|WP_000426914.1\|650601_650835_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP013137.1\|WP_058007993.1\|651828_655395_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP013137.1\|WP_000623911.1\|642987_644634_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|224378
NZ_CP013137.1\|WP_000239738.1\|647663_648650_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP013137.1\|WP_000687328.1\|659664_660402_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP013137.1\|WP_000043237.1\|650950_651682_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP013137.1\|WP_000167264.1\|649561_650296_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP013137.1\|WP_000531320.1\|656631_656964_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP013137.1\|WP_000547905.1\|640945_641587_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|224480
NZ_CP013137.1\|WP_047213386.1\|644823_646884_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP013137.1\|WP_000268754.1\|658698_658974_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP013137.1\|WP_001261992.1\|659161_659665_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP013137.1\|WP_000171418.1\|642598_642973_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP013137.1\|WP_058007995.1\|656989_658357_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP013137.1\|WP_000047362.1\|648642_649569_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_000007684.1\|655394_656645_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP013137.1\|WP_000164332.1\|640294_640939_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	1.52718e-114
NZ_CP013137.1\|WP_000181404.1\|660504_660855_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	6.77895e-70
NZ_CP013137.1\|WP_001548538.1\|647086_647659_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	2.37773e-98
NZ_CP013137.1\|WP_000517908.1\|641967_642156_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_CP013137.1\|WP_000426914.1\|650601_650835_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	5.23888e-31
NZ_CP013137.1\|WP_058007993.1\|651828_655395_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP013137.1\|WP_000623911.1\|642987_644634_+\|DAK2-domain-containing-protein	gnl\|CDD\|224378	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only].	0
NZ_CP013137.1\|WP_000239738.1\|647663_648650_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	6.04516e-178
NZ_CP013137.1\|WP_000687328.1\|659664_660402_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.98496e-164
NZ_CP013137.1\|WP_000043237.1\|650950_651682_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	4.78039e-115
NZ_CP013137.1\|WP_000167264.1\|649561_650296_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	2.42527e-140
NZ_CP013137.1\|WP_000531320.1\|656631_656964_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	5.84113e-47
NZ_CP013137.1\|WP_000547905.1\|640945_641587_+\|thiamine-diphosphokinase	gnl\|CDD\|224480	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism].	1.16343e-81
NZ_CP013137.1\|WP_047213386.1\|644823_646884_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP013137.1\|WP_000268754.1\|658698_658974_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	3.01687e-41
NZ_CP013137.1\|WP_001261992.1\|659161_659665_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	3.15868e-68
NZ_CP013137.1\|WP_000171418.1\|642598_642973_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	4.1554e-37
NZ_CP013137.1\|WP_058007995.1\|656989_658357_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP013137.1\|WP_000047362.1\|648642_649569_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	4.04404e-134

>NZ_CP013137.1|WP_000167264.1|649561_650296_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADDVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP013137.1|WP_000047362.1|648642_649569_+|ACP-S-malonyltransferase
MSKTAIIFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDVLETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVNEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLEDVKGWNEND
>NZ_CP013137.1|WP_000239738.1|647663_648650_+|phosphate-acyltransferase-PlsX
MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYKLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQKIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNQDHSLNFVGNIEAKTLMDGDTDVVVTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKLAGAILKKDLAEFAKKMDYSEYGGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE
>NZ_CP013137.1|WP_001548538.1|647086_647659_+|transcription-factor-FapR
MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
>NZ_CP013137.1|WP_047213386.1|644823_646884_+|ATP-dependent-DNA-helicase-RecG
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVRQEITGNRVFFNSQGTQTQENADVQLEPVYRIKEGIKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKSSDEAIEIDYDLDQVKSFIDRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD
>NZ_CP013137.1|WP_000623911.1|642987_644634_+|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESESEINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAVEKANNTEDCIELMEYIIVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKLDKDEFVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDEEIVKVHVHTENPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETAIITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNILMASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLTYAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLIEMLAEDSEILTVIIGQDAEQAVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE
>NZ_CP013137.1|WP_000171418.1|642598_642973_+|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRDGIAEILGHENYAKGIKVTENNGVVDIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLNVSVNSINIYVQGVRVNNTGKKA
>NZ_CP013137.1|WP_000517908.1|641967_642156_-|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_CP013137.1|WP_000547905.1|640945_641587_+|thiamine-diphosphokinase
MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFFSVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGRLDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTDDVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDGLILQIRSTDLN
>NZ_CP013137.1|WP_000164332.1|640294_640939_+|ribulose-phosphate-3-epimerase
MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
>NZ_CP013137.1|WP_000426914.1|650601_650835_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
>NZ_CP013137.1|WP_000043237.1|650950_651682_+|ribonuclease-III
MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQIK
>NZ_CP013137.1|WP_058007993.1|651828_655395_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVTRRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQIIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKTLSHQMKHSDIVVTVHDIDQYTNDNRQLDQRLNDLKGQQANKEADKQRLSQQIQQYKGKRHQLDNDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLIELLENISNEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSEQSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKKTKKEYQQTNKELSAVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGVKHILKAKNKELKGIHGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFLKERNLGRATFLPLNVIQSRVVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLGNTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTTMRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLTTQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETHLESIKASLKRLEDEIERYTKLSKEGKESVTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQSQQTKHQLNDVKEKIAFFNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEATLQVCHQDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKTEYTSDESIDALRKKVKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRRAKETLEQIISEMDQEVTERFKETFHAIQGHFTAVFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLLSGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVITHRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ
>NZ_CP013137.1|WP_000007684.1|655394_656645_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFATNKENEEVKSLTEEQGQDKLEDTHSEGSTQDVNDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREVIVEKIVEIYHQEDDNSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVMLAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDTAGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVTGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQNEEITTVENDQIVTEEKDDNHGTK
>NZ_CP013137.1|WP_000531320.1|656631_656964_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
>NZ_CP013137.1|WP_058007995.1|656989_658357_+|signal-recognition-particle-protein
MAFEGLSERLQATMQKMRGKAKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMAGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKGMNLPF
>NZ_CP013137.1|WP_000268754.1|658698_658974_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
>NZ_CP013137.1|WP_001261992.1|659161_659665_+|ribosome-maturation-factor-RimM
MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNNDLEYTVKSHRVHKGLHMLTFEGINNINDIEYLKGSSIYQERDHEDIVLEENEFYYSDIIGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDIENKKIIITPMEGLLD
>NZ_CP013137.1|WP_000687328.1|659664_660402_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNADKQILERYKIGLKKG
>NZ_CP013137.1|WP_000181404.1|660504_660855_+|50S-ribosomal-protein-L19
MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_4

1459809-1459891

Orphan

Consensus_repeat	Method
CCCCAACTTGCATTGTCTGTAGAA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP013137_4

>merge|NZ_CP013137|4|1459809-1459891|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCACACCCCAACTTGCATTGCCTGTAGAA

>NZ_CP013137|4|4|1459809-1459891|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAA	ATTGGTGTTCCAATTTCTCTATGTTGGGGCCCACA
CCCCAACTTGCATTGCCTGTAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_000949467.1\|1464351_1464852_+\|H-type-ferritin-FtnA	unknown	unknown	gnl\|CDD\|224445
NZ_CP013137.1\|WP_000180462.1\|1453237_1453438_-\|DUF1128-family-protein	unknown	unknown	gnl\|CDD\|227177
NZ_CP013137.1\|WP_000037088.1\|1454608_1455826_+\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|224214
NZ_CP013137.1\|WP_000153530.1\|1455938_1456568_-\|two-component-system-response-regulator-VraR	unknown	unknown	gnl\|CDD\|225107
NZ_CP013137.1\|WP_001793428.1\|1451978_1453235_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_CP013137.1\|WP_000548781.1\|1467179_1467710_-\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP013137.1\|WP_000636142.1\|1458916_1459675_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP013137.1\|WP_001790679.1\|1464933_1465026_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_025174475.1\|1461375_1461789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000149068.1\|1457597_1458299_-\|cell-wall-active-antibiotics-response-protein	unknown	unknown	gnl\|CDD\|227100
NZ_CP013137.1\|WP_000428172.1\|1454055_1454331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_058008143.1\|1462746_1464060_-\|lipid-II-isoglutaminyl-synthase-subunit-MurT	unknown	unknown	gnl\|CDD\|223840
NZ_CP013137.1\|WP_001110179.1\|1458313_1458700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000544973.1\|1462013_1462745_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP013137.1\|WP_000228666.1\|1453584_1454049_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
NZ_CP013137.1\|WP_000613738.1\|1465242_1465797_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834
NZ_CP013137.1\|WP_000999713.1\|1460200_1461187_+\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP013137.1\|WP_001017131.1\|1456557_1457601_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP013137.1\|WP_001790257.1\|1461817_1461928_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_058008145.1\|1465863_1466934_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_000949467.1\|1464351_1464852_+\|H-type-ferritin-FtnA	gnl\|CDD\|224445	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism].	4.6035e-74
NZ_CP013137.1\|WP_000180462.1\|1453237_1453438_-\|DUF1128-family-protein	gnl\|CDD\|227177	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown].	1.31339e-24
NZ_CP013137.1\|WP_000037088.1\|1454608_1455826_+\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	3.09765e-85
NZ_CP013137.1\|WP_000153530.1\|1455938_1456568_-\|two-component-system-response-regulator-VraR	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.91794e-79
NZ_CP013137.1\|WP_001793428.1\|1451978_1453235_-\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_CP013137.1\|WP_000548781.1\|1467179_1467710_-\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	1.4991e-11
NZ_CP013137.1\|WP_000636142.1\|1458916_1459675_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.9498e-126
NZ_CP013137.1\|WP_000149068.1\|1457597_1458299_-\|cell-wall-active-antibiotics-response-protein	gnl\|CDD\|227100	COG4758, COG4758, Predicted membrane protein [Function unknown].	2.96574e-79
NZ_CP013137.1\|WP_000999713.1\|1460200_1461187_+\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	6.20478e-76
NZ_CP013137.1\|WP_058008143.1\|1462746_1464060_-\|lipid-II-isoglutaminyl-synthase-subunit-MurT	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	2.65498e-98
NZ_CP013137.1\|WP_000544973.1\|1462013_1462745_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.79354e-120
NZ_CP013137.1\|WP_000228666.1\|1453584_1454049_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	3.39151e-65
NZ_CP013137.1\|WP_000613738.1\|1465242_1465797_+\|3'-5'-exonuclease	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	4.39188e-75
NZ_CP013137.1\|WP_001017131.1\|1456557_1457601_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.78722e-72
NZ_CP013137.1\|WP_058008145.1\|1465863_1466934_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0

>NZ_CP013137.1|WP_000636142.1|1458916_1459675_-|type-I-methionyl-aminopeptidase
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
>NZ_CP013137.1|WP_001110179.1|1458313_1458700_-|hypothetical-protein
MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITKKEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIETQIQQTSTEKIATEKTSYLINYMNAVA
>NZ_CP013137.1|WP_000149068.1|1457597_1458299_-|cell-wall-active-antibiotics-response-protein
MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVTTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
>NZ_CP013137.1|WP_001017131.1|1456557_1457601_-|sensor-histidine-kinase
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD
>NZ_CP013137.1|WP_000153530.1|1455938_1456568_-|two-component-system-response-regulator-VraR
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
>NZ_CP013137.1|WP_000037088.1|1454608_1455826_+|YihY/virulence-factor-BrkB-family-protein
MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKEDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNENTRYEYDEDTNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
>NZ_CP013137.1|WP_000428172.1|1454055_1454331_+|hypothetical-protein
MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTRKPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR
>NZ_CP013137.1|WP_000228666.1|1453584_1454049_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
>NZ_CP013137.1|WP_000180462.1|1453237_1453438_-|DUF1128-family-protein
MTNEEKVLAIREKLNIVNQGLLDPEKYTNANEEELTDIYDFVQSRERLSPSEVTAIADALGQLRHD
>NZ_CP013137.1|WP_001793428.1|1451978_1453235_-|aminopeptidase
MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
>NZ_CP013137.1|WP_000999713.1|1460200_1461187_+|aromatic-acid-exporter-family-protein
MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA
>NZ_CP013137.1|WP_025174475.1|1461375_1461789_-|hypothetical-protein
MKPTKVILRDASYVHSKTSITFILKDVVIEEDNKIYYFDTSATFEDQEIKFEFALFDSDMDNLKHMEYDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDSGLRHSNMATESGISLRINVTKSDFNIFINELASLH
>NZ_CP013137.1|WP_001790257.1|1461817_1461928_-|hypothetical-protein
MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT
>NZ_CP013137.1|WP_000544973.1|1462013_1462745_-|type-1-glutamine-amidotransferase
MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHNFGTLGHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEKQAKQVLIDRANRQKKSR
>NZ_CP013137.1|WP_058008143.1|1462746_1464060_-|lipid-II-isoglutaminyl-synthase-subunit-MurT
MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLAEQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKTKIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKLLLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQIGHYHCQCGFKREQAKYEISSFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYTVLRELGLNEQAIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEKVYIISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPIIVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS
>NZ_CP013137.1|WP_000949467.1|1464351_1464852_+|H-type-ferritin-FtnA
MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFIQQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSEIARQDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGARTFDEE
>NZ_CP013137.1|WP_001790679.1|1464933_1465026_-|hypothetical-protein
MTKNTIISLENEKTQINDSENESSDLRKAK
>NZ_CP013137.1|WP_000613738.1|1465242_1465797_+|3'-5'-exonuclease
MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNPQDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQNIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITFRLLKNYENLTYVTNIYGKNLKDKG
>NZ_CP013137.1|WP_058008145.1|1465863_1466934_-|DNA-polymerase-IV
MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPMSLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKPDGMTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDKGIFNGRDLYEKTEFELIRLFGKRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERLNKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRLIGITVGNLEQSTYKNMTIYDFI
>NZ_CP013137.1|WP_000548781.1|1467179_1467710_-|DUF3267-domain-containing-protein
MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_5

1574190-1574269

Orphan

Consensus_repeat	Method
GGCCCCACCCCAACTTACATTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013137_5

>merge|NZ_CP013137|5|1574190-1574269|CRISPRCasFinder
GGCCCCACCCCAACTTACATTGTTTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCACCCCAACTTGCATTGT

>NZ_CP013137|5|5|1574190-1574269|CRISPRCasFinder
GGCCCCACCCCAACTTACATTGT	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG
GGCCCCACCCCAACTTGCATTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_001105716.1\|1584638_1585202_+\|accessory-gene-regulator-AgrB	unknown	unknown	gnl\|CDD\|214819
NZ_CP013137.1\|WP_001108473.1\|1571702_1572572_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP013137.1\|WP_001566740.1\|1562671_1563403_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP013137.1\|WP_178136400.1\|1563414_1563579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_058008167.1\|1565023_1566049_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP013137.1\|WP_000867953.1\|1582885_1583671_+\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
NZ_CP013137.1\|WP_000120321.1\|1580553_1581702_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP013137.1\|WP_000216892.1\|1576288_1576915_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000240648.1\|1577634_1579251_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP013137.1\|WP_000046023.1\|1584267_1584348_-\|delta-hemolysin	unknown	unknown	gnl\|CDD\|173213
NZ_CP013137.1\|WP_000197641.1\|1579785_1580529_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP013137.1\|WP_000201394.1\|1576911_1577091_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000595397.1\|1567453_1568470_-\|bi-component-leukocidin-LukGH-subunit-G	unknown	unknown	gnl\|CDD\|369625
NZ_CP013137.1\|WP_000791409.1\|1568491_1569547_-\|bi-component-leukocidin-LukGH-subunit-H	unknown	unknown	gnl\|CDD\|369625
NZ_CP013137.1\|WP_000206632.1\|1569982_1571206_+\|ArgE/DapE-family-deacylase	unknown	unknown	gnl\|CDD\|181490
NZ_CP013137.1\|WP_001013104.1\|1564159_1564306_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000705240.1\|1563941_1564124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000917289.1\|1579326_1579611_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP013137.1\|WP_001045081.1\|1574409_1575717_+\|TrkH-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|273349
NZ_CP013137.1\|WP_001089804.1\|1563556_1563742_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_001105716.1\|1584638_1585202_+\|accessory-gene-regulator-AgrB	gnl\|CDD\|214819	smart00793, AgrB, Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein. AgrB is involved in the proteolytic processing of AgrD and may have both proteolytic enzyme activity and a transporter facilitating the export of the processed AgrD peptide.	1.92602e-45
NZ_CP013137.1\|WP_001108473.1\|1571702_1572572_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.86916e-09
NZ_CP013137.1\|WP_001566740.1\|1562671_1563403_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	6.36013e-22
NZ_CP013137.1\|WP_001045081.1\|1574409_1575717_+\|TrkH-family-potassium-uptake-protein	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	9.80292e-81
NZ_CP013137.1\|WP_058008167.1\|1565023_1566049_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.94437e-25
NZ_CP013137.1\|WP_000867953.1\|1582885_1583671_+\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	2.11308e-126
NZ_CP013137.1\|WP_000120321.1\|1580553_1581702_-\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	1.67862e-06
NZ_CP013137.1\|WP_000240648.1\|1577634_1579251_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP013137.1\|WP_000595397.1\|1567453_1568470_-\|bi-component-leukocidin-LukGH-subunit-G	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	3.80776e-99
NZ_CP013137.1\|WP_000791409.1\|1568491_1569547_-\|bi-component-leukocidin-LukGH-subunit-H	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	1.31423e-77
NZ_CP013137.1\|WP_000206632.1\|1569982_1571206_+\|ArgE/DapE-family-deacylase	gnl\|CDD\|181490	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed.	0
NZ_CP013137.1\|WP_000197641.1\|1579785_1580529_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.23687e-11
NZ_CP013137.1\|WP_000046023.1\|1584267_1584348_-\|delta-hemolysin	gnl\|CDD\|173213	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin.	2.50854e-06
NZ_CP013137.1\|WP_000917289.1\|1579326_1579611_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	5.94304e-45

>NZ_CP013137.1|WP_001108473.1|1571702_1572572_-|DMT-family-transporter
MNYLMYLFCMFIWGLNFIAVKIQGDSLPLEVALLYRSLIAFSLFGVMFIFIFKKLKLNNTNWFTIIGFGLCNFTISYLLLYYGTFYSSAAIVTLIFSMKAILTPIFISMVFKRKISNRIYIGGGLGVVSVVVILYPDLNSLTNEFIIGVAFALLGTIITSIGDVLSLYNSESKVHPVLSNTIGMLSAVIFLLIYTSFKGYRYSFPLELNFWFGLLYLSILASFLAWFFYLKLINNIGAAESGYMVAMFPAIGGIASVIMGETHLSINLVVGIILACMGAYLALYKPKPS
>NZ_CP013137.1|WP_000206632.1|1569982_1571206_+|ArgE/DapE-family-deacylase
MTTFSEKEKIQLLADIVELQTENNNEIDVCNYLKDLFDKYDIKSEILKVNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWTYPPFQLTEKDGKLYGRGTTDMKGGLMALVITLIELKEQNQLPQGTIRLLATAGEEKEQEGAKLLADKGYLDDVDGLIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNQFKEKYSELKKHDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLEFNVRPVPEYDNDFIESFFQNIINNVNSNKLSLDIPSNHRPVTSDKNSKLITTIKDVASSYVNKDDIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKYIDIFKEASIQYLKEK
>NZ_CP013137.1|WP_000791409.1|1568491_1569547_-|bi-component-leukocidin-LukGH-subunit-H
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
>NZ_CP013137.1|WP_000595397.1|1567453_1568470_-|bi-component-leukocidin-LukGH-subunit-G
MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILEPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHDVKFVKVLNDNEKK
>NZ_CP013137.1|WP_058008167.1|1565023_1566049_+|site-specific-integrase
MKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNELRSGFNIDNYITLAEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKINRQVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVNYKAGKPTKSEQEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSGARNIKIEHINQVKNTIFIDERKTDTSPRYISIAKSDMKHIMDVISTFAISYDGYIFKEAGSIINLHAINNALKSACRVNNIPIITSHALRHTHCSYLLAKGVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEEDKKQLKF
>NZ_CP013137.1|WP_001013104.1|1564159_1564306_+|hypothetical-protein
MNGGENFMADKNKKQEATRSNPINKSFEKPGASENLKSTLSEKAKKKD
>NZ_CP013137.1|WP_000705240.1|1563941_1564124_+|hypothetical-protein
MKITNCKIKKETIVYEVLTSGNQPFTYELPKDLSSHNARKYLEFISQKIDGDKLTKEDSL
>NZ_CP013137.1|WP_001089804.1|1563556_1563742_+|hypothetical-protein
MNSYKEIEHLHINTGGKELTQEQIEEAKSFIDSQGFKDMIREAKESRQRVMESKITDRTKM
>NZ_CP013137.1|WP_178136400.1|1563414_1563579_+|hypothetical-protein
MNLKEVDINIEEWEMVEIPFYTEEELTYRLKNDLPITKSEFEEQESKNEFLQRN
>NZ_CP013137.1|WP_001566740.1|1562671_1563403_+|helix-turn-helix-transcriptional-regulator
MGIGEGLKKLRKNKNMTMEQLATDLNNKYPDLMKLTKGKISKWENEKEEPRLSTAKILAEYFNVKINDLYSESNTTYKDDNDITSIYNKLTPPRQSNVLKYATNQLEEQNNDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFVRGYVPAHDIALKVNGDSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKDLHFYDNESVRLVGKVIL
>NZ_CP013137.1|WP_001045081.1|1574409_1575717_+|TrkH-family-potassium-uptake-protein
MNKVHKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFIASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNRFLIMVTWNIDEPGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTSVSAFNNAGFALFKNNLIDYSSDPIVIITISILIIFGGIGHFVVIDFINCKKLSKLSLHSKLVLTTTSILIIIGAITFFLLEQFNTMQNMGLVEKIGNSFFQSVTTRTAGFNSIDIASINKSTALMLMLLMFIGGAPLSASGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISDKHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYHGITKIIIIFVMLCGKVGLLTLLRTFIPPKSPKNYRYTKGQIYL
>NZ_CP013137.1|WP_000216892.1|1576288_1576915_-|hypothetical-protein
MTVKVISLSELLTGDKQEVKRKIPSVLNILNSFETISISGSESAHDVDLFLKNKSIAFDRQNLSRTHLVFSQFKSKQILVGYFTISNKPLVFTKRMLDKISNTLKKKLYQKGETHSGNDNLIIQGYLIAQIGKNYSEEALATKSINGNDLLTLAYEKVLEGANIFGGSYIWIEYEDVDRLREFYRKFGFTEIKDHTSENNLKMAILKI
>NZ_CP013137.1|WP_000201394.1|1576911_1577091_-|hypothetical-protein
MATISITTDYKFTKKSAQKLIDAMEINENKSNVNKTNIKATKIKSTCEIENLLKDYRSN
>NZ_CP013137.1|WP_000240648.1|1577634_1579251_-|chaperonin-GroEL
MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYISEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIKAEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEKNNDQPNMGGMPGMM
>NZ_CP013137.1|WP_000917289.1|1579326_1579611_-|co-chaperone-GroES
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
>NZ_CP013137.1|WP_000197641.1|1579785_1580529_+|CPBP-family-intramembrane-metalloprotease
MTRLWASLLTVIIYILSQFLPLLIVTKLPFVQYSGIELTKAVIYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNRIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP
>NZ_CP013137.1|WP_000120321.1|1580553_1581702_-|hypothetical-protein
MSYHWFKKMLLSTSILILSSSSLGLATHTVEAKDNLNGEKPTTNLNHNVTSPSVNSEINNNETGTPHESNQTGNEGTNSNSRDANPDSNNVKPDSNNQNPSSDSKPDPNNPNPGPNPKPDPDKPKPNPDPDPKPDPDKPKPNPNPKPDPNKPNPNPSPDPNQPGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGNDFVSQRFLALANGAYKYNPYILNQINQLGKEFGEVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQRR
>NZ_CP013137.1|WP_000867953.1|1582885_1583671_+|carbon-nitrogen-family-hydrolase
MKVQIYQLPIIFGDSSKNETQITQWFEKNMNDEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK
>NZ_CP013137.1|WP_000046023.1|1584267_1584348_-|delta-hemolysin
MAQDIISTISDLVKWIIDTVNKFTKK
>NZ_CP013137.1|WP_001105716.1|1584638_1585202_+|accessory-gene-regulator-AgrB
MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAVNIGKLIVMYTIAYILNIFLFTLITNLTFYLIRRHAHGAHAPSSFWCYVESIFLFTLLPLILVNYHINFLIMTIMTVIAIGMIIRYAPAATKKKPIPVRLIKRKRNYAIIVSLIFFIITLIIKEPFAQFMQLGIIIEAITLLPIFFVRRT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_6

1702656-1702741

Orphan

Consensus_repeat	Method
CAACTTTAGTTGTTAGGGGCTCTTATGCA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP013137_6

>merge|NZ_CP013137|6|1702656-1702741|CRISPRCasFinder
CAACTTTAGTTGTTAGGGGCTCTTATGCATGCGCTTAGCGCAGGCGCTCCTATTTTTCAACTTTAGTTGTTAGGGGCTCTTATGCA

>NZ_CP013137|6|6|1702656-1702741|CRISPRCasFinder
CAACTTTAGTTGTTAGGGGCTCTTATGCA	TGCGCTTAGCGCAGGCGCTCCTATTTTT
CAACTTTAGTTGTTAGGGGCTCTTATGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_000070865.1\|1693967_1694411_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP013137.1\|WP_001292149.1\|1714274_1714709_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|227014
NZ_CP013137.1\|WP_000808822.1\|1697528_1697759_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000370936.1\|1706132_1706990_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP013137.1\|WP_000019739.1\|1700301_1701282_+\|CDF-family-zinc-efflux-transporter-CzrB	unknown	unknown	gnl\|CDD\|224151
NZ_CP013137.1\|WP_001127957.1\|1697789_1698728_-\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
NZ_CP013137.1\|WP_000648717.1\|1714708_1715815_+\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP013137.1\|WP_000115558.1\|1703956_1705084_-\|SAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366887
NZ_CP013137.1\|WP_000083812.1\|1710557_1712096_+\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP013137.1\|WP_000927349.1\|1712130_1714263_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP013137.1\|WP_001123308.1\|1694610_1695024_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NZ_CP013137.1\|WP_001802298.1\|1703144_1703249_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_001024091.1\|1699162_1699828_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_CP013137.1\|WP_058008186.1\|1716133_1723567_-\|DUF1542-domain-containing-protein	unknown	unknown	gnl\|CDD\|275089
NZ_CP013137.1\|WP_031927658.1\|1708071_1709877_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP013137.1\|WP_000160304.1\|1693136_1693847_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP013137.1\|WP_000495694.1\|1701547_1702639_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000003759.1\|1699979_1700300_+\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP013137.1\|WP_000123394.1\|1695481_1696855_-\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_CP013137.1\|WP_000908193.1\|1707057_1707840_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_000070865.1\|1693967_1694411_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.87929e-68
NZ_CP013137.1\|WP_001292149.1\|1714274_1714709_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_CP013137.1\|WP_031927658.1\|1708071_1709877_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP013137.1\|WP_000370936.1\|1706132_1706990_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	2.43638e-59
NZ_CP013137.1\|WP_000019739.1\|1700301_1701282_+\|CDF-family-zinc-efflux-transporter-CzrB	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	8.62765e-109
NZ_CP013137.1\|WP_001127957.1\|1697789_1698728_-\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	2.06018e-128
NZ_CP013137.1\|WP_000648717.1\|1714708_1715815_+\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP013137.1\|WP_000115558.1\|1703956_1705084_-\|SAP-domain-containing-protein	gnl\|CDD\|366887	pfam02037, SAP, SAP domain. The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.	6.16106e-06
NZ_CP013137.1\|WP_000083812.1\|1710557_1712096_+\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP013137.1\|WP_000927349.1\|1712130_1714263_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	5.9991e-68
NZ_CP013137.1\|WP_001123308.1\|1694610_1695024_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	2.52292e-44
NZ_CP013137.1\|WP_001024091.1\|1699162_1699828_-\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.86209e-48
NZ_CP013137.1\|WP_058008186.1\|1716133_1723567_-\|DUF1542-domain-containing-protein	gnl\|CDD\|275089	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain. This domain, about 375 amino acids long on average, occurs only in Staphylococcus and Streptococcus. It occurs as a non-repetitive N-terminal domain of LPXTG-anchored surface proteins, including SasC, Mrp, and FmtB. This region in SasC was shown to be involved in cell aggregation and biofilm formation, which may explain the methicillin resistance seen for Mrp and FmtB.	1.71788e-108
NZ_CP013137.1\|WP_000160304.1\|1693136_1693847_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
NZ_CP013137.1\|WP_000003759.1\|1699979_1700300_+\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
NZ_CP013137.1\|WP_000123394.1\|1695481_1696855_-\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.92966e-06
NZ_CP013137.1\|WP_000908193.1\|1707057_1707840_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	1.56485e-106

>NZ_CP013137.1|WP_000495694.1|1701547_1702639_+|hypothetical-protein
MFTYFKSALKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYVQNIAIYSQFGQKPPGDVYLKVIAVLLIAAIVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGIYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKDNKVVTEPKNTKVETDKVTTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>NZ_CP013137.1|WP_000019739.1|1700301_1701282_+|CDF-family-zinc-efflux-transporter-CzrB
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALIAFIYAEKNATATKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH
>NZ_CP013137.1|WP_000003759.1|1699979_1700300_+|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>NZ_CP013137.1|WP_001024091.1|1699162_1699828_-|SDR-family-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSIIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFEGKGEIPREDVATVLKEIVTSNHFNHQEFQVISGEQDIKDALTQFENETD
>NZ_CP013137.1|WP_001127957.1|1697789_1698728_-|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGKSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQRGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>NZ_CP013137.1|WP_000808822.1|1697528_1697759_-|hypothetical-protein
MKQFLYIALVCSVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>NZ_CP013137.1|WP_000123394.1|1695481_1696855_-|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRMSNMKETLFNQINAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>NZ_CP013137.1|WP_001123308.1|1694610_1695024_-|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIQLITSLPNRTKLLGIGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>NZ_CP013137.1|WP_000070865.1|1693967_1694411_-|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLEKAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>NZ_CP013137.1|WP_000160304.1|1693136_1693847_+|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
>NZ_CP013137.1|WP_001802298.1|1703144_1703249_-|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_CP013137.1|WP_000115558.1|1703956_1705084_-|SAP-domain-containing-protein
MSVNARDLLVLHNNVNRLVGEEIFANKCLANNDVQIMNSIKKLIEAELLTTTNDFEVSIYKKTRPELQSILKSFGIKTTGNKPDLIKRIDDNFHIINNLDLPYVYIPTKKGEEILKKTEYLTSFIYSYKISLERAYYMVENYIDENCDDKVAEIYKFEFQRKYDNGEFDFNHGYNFELNMLIDHYKRDVKDYDNARKYSNIYLYFGLRDFLKKLMSNYSYYDSKGNIDLNEIQNDLNRFINSSASGMYERLIYNENLSNNIMFELFKKDTQDYSDLEEQLIEKFINYVVSYVKKESRSNTLIELSKMLEKGYTIDKEKFKKEDEYLSRYIITDINYLKNLESKIGVAIDSRNGEIHLVLDDDSLDKLIKNQKNRQ
>NZ_CP013137.1|WP_000370936.1|1706132_1706990_-|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINRLREKGYKVFLATGRSHSEIHQLVPEDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQIINLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
>NZ_CP013137.1|WP_000908193.1|1707057_1707840_-|ABC-transporter-ATP-binding-protein
MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNVYEPPTTGDVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_CP013137.1|WP_031927658.1|1708071_1709877_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKSEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_CP013137.1|WP_000083812.1|1710557_1712096_+|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIVGFKVLAPIMKFIMYILSVAVESLVHAHLLPVVSILVEPAKILFLNNAINHGVFTPLGTDQAAKVGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKTPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_CP013137.1|WP_000927349.1|1712130_1714263_+|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGEDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVKKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHIETKDIDGNTSFENEQTSNLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLALPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_CP013137.1|WP_001292149.1|1714274_1714709_+|PTS-sugar-transporter-subunit-IIA
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_CP013137.1|WP_000648717.1|1714708_1715815_+|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFADKATVLDAVKDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKVFLSEYAKVDDGLADEIIEAYNSLS
>NZ_CP013137.1|WP_058008186.1|1716133_1723567_-|DUF1542-domain-containing-protein
MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPTAQPAAPANQGQPAAQPANQGGQANPAGGAAQPNTQPAGQGNQADPNNAAQAQPGNQAAPANQAGQGNNQATPNNNATPANQTQPANAPAAAQPAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQARGNVAALGRVNANDSTDHGNFNGISKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEFTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLKNMTVNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADNILNEDANHVETANRASQAAIDGLVTKLQAALIDNQAAIAELDAKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTSQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTAPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNDVKQAATARKAQNATVSNATNEEVAEADAAVEAAQKQGLHDIQVVKSKQEVADTKSKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVTTAKDNSIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANTDIDNAAANTDVDNAKTTNEATIAAITPDANVKPTAKQAIADKVQAQETAIDAYNGATTEEKAAAKQQVQTEKTTADAAIDGAHSNAEVEAAKNAEIAKIEAIQPATTTKDDAKQAITTKANERKAAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGETSIDQVTPTVNKKATARNEITTILNNKLQAIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDEAKANAEVAINAVTPKVVKKQAAKDEIDQLQVAQTSVINNDQNATNEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKSNAKNEVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQIKDQAVADVQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKTNARAELLTEMQNKITEILSDNTTTNEEKGKDIEPVRATYEEGLNNINTANTTGDVTTAKDTAVQKVQQLHANPVKKPAGKTALDQAAADRKTQIEQTPNASQQEINDAKQEVDATLNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIEAAYNSKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKETATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTVLESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKANQAIEAKAEDTKESIDHSDQLTAEEKTEALAMIKQITDQAKKGINDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADASAKEIARTDLGRYFDRFADNLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTNNGTDNNDATANSNANATPENTGQPNVSETTDNGKADASPTTPNNSDAATGETTATSTNNPSTDDANNKPTANNNSSVDASTDNSATGNGTIDKPEVESTNNGTTDKPATETDNVTPAESTTNNNSTTATNENAPTGSTATAPTTASTEAASSADSKDNAFVNDSKQNAEVNNSAESQSTNGMVVQPKSENKAKTEKDGRDSTNQSMVESTTETLPSADITEPKVPSNTSKDKEESTTNQTDAGHLKSETNVASNEVDKSEGNVDTDVSNKPSTSKPSEAKDKATSTEDSQKADMATADTKDNQAAIGATADVNNKATQNDGANASPATVSNGSNSTNQDMLNVTKTEENKANVKSAQQGKVNKPKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_7

1973321-1973412

Orphan

Consensus_repeat	Method
TGCGTTCCTTTATTTTCTGCGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013137_7

>merge|NZ_CP013137|7|1973321-1973412|CRISPRCasFinder
TGCGTTCCTTTATTTTCTGCGAATTTTATGAGCTAGAAAGGCTTATGCAGTTGACGTTTTACGTCCAACTGCGTTCCTTTATTTTCTGCGAA

>NZ_CP013137|7|7|1973321-1973412|CRISPRCasFinder
TGCGTTCCTTTATTTTCTGCGAA	TTTTATGAGCTAGAAAGGCTTATGCAGTTGACGTTTTACGTCCAAC
TGCGTTCCTTTATTTTCTGCGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_031927724.1\|1979576_1980269_-\|6-carboxyhexanoate--CoA-ligase	unknown	unknown	gnl\|CDD\|224342
NZ_CP013137.1\|WP_000594519.1\|1975622_1976552_+\|bi-component-gamma-hemolysin-HlgAB-subunit-A	unknown	unknown	gnl\|CDD\|369625
NZ_CP013137.1\|WP_001046645.1\|1981372_1982380_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|235755
NZ_CP013137.1\|WP_058008220.1\|1965084_1965447_-\|DUF4467-domain-containing-protein	unknown	unknown	gnl\|CDD\|291399
NZ_CP013137.1\|WP_000762708.1\|1970989_1971094_+\|putative-metal-homeostasis-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000162805.1\|1964466_1965066_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|224565
NZ_CP013137.1\|WP_001807148.1\|1973608_1973728_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000783428.1\|1978069_1979047_+\|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B	unknown	unknown	gnl\|CDD\|273388
NZ_CP013137.1\|WP_058008222.1\|1969376_1970816_-\|multidrug-efflux-MFS-transporter-MdeA	unknown	unknown	gnl\|CDD\|129794
NZ_CP013137.1\|WP_000479576.1\|1967776_1968496_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP013137.1\|WP_000792566.1\|1973822_1975133_+\|B-domain-containing-protein	unknown	unknown	gnl\|CDD\|288473
NZ_CP013137.1\|WP_000200954.1\|1979098_1979566_-\|QueT-transporter-family-protein	unknown	unknown	gnl\|CDD\|377623
NZ_CP013137.1\|WP_000019122.1\|1972259_1973126_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP013137.1\|WP_031927725.1\|1982381_1983740_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|273109
NZ_CP013137.1\|WP_000971544.1\|1980279_1981395_-\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223234
NZ_CP013137.1\|WP_000615459.1\|1967048_1967780_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP013137.1\|WP_000825931.1\|1968476_1969256_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270429
NZ_CP013137.1\|WP_001012216.1\|1965701_1966952_+\|FemA/FemB-family-glycyltransferase-FmhA	unknown	unknown	gnl\|CDD\|367067
NZ_CP013137.1\|WP_001125208.1\|1971247_1971934_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184518
NZ_CP013137.1\|WP_058008224.1\|1977120_1978068_+\|bi-component-gamma-hemolysin-HlgCB-subunit-C	unknown	unknown	gnl\|CDD\|369625

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_031927724.1\|1979576_1980269_-\|6-carboxyhexanoate--CoA-ligase	gnl\|CDD\|224342	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism].	2.10153e-129
NZ_CP013137.1\|WP_000594519.1\|1975622_1976552_+\|bi-component-gamma-hemolysin-HlgAB-subunit-A	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	4.31899e-97
NZ_CP013137.1\|WP_001046645.1\|1981372_1982380_-\|biotin-synthase-BioB	gnl\|CDD\|235755	PRK06256, PRK06256, biotin synthase; Validated.	0
NZ_CP013137.1\|WP_058008220.1\|1965084_1965447_-\|DUF4467-domain-containing-protein	gnl\|CDD\|291399	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467). Large family of predicted lipoproteins from Gram-positive bacteria Experimentally determined structure shows a cystatitin-like fold, allowing us to classify this family in the NFT2 clan, despite lack of any detectable sequence similarity between members of this family and other families in this clan.	2.16804e-31
NZ_CP013137.1\|WP_000200954.1\|1979098_1979566_-\|QueT-transporter-family-protein	gnl\|CDD\|377623	pfam06177, QueT, QueT transporter. This family includes the queT gene encoding a hypothetical integral membrane protein with 5 predicted transmembrane regions. The queT genes in Firmicutes are often preceded by the PreQ1 (7-aminomethyl-7-deazaguanine) riboswitches of two distinct classes, suggesting involvement of the QueT transporters in uptake of a queuosine biosynthetic intermediate.	0.00118414
NZ_CP013137.1\|WP_000162805.1\|1964466_1965066_-\|DsbA-family-protein	gnl\|CDD\|224565	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones].	6.8825e-31
NZ_CP013137.1\|WP_000783428.1\|1978069_1979047_+\|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	5.50766e-128
NZ_CP013137.1\|WP_058008222.1\|1969376_1970816_-\|multidrug-efflux-MFS-transporter-MdeA	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.67025e-92
NZ_CP013137.1\|WP_000019122.1\|1972259_1973126_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	6.48457e-90
NZ_CP013137.1\|WP_000792566.1\|1973822_1975133_+\|B-domain-containing-protein	gnl\|CDD\|288473	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI. This family of proteins represents Sbi domain IV which binds the central complement protein C3. Sbi-IV interacts with Sbi-III to induce a consumption of complement via alternative pathway activation. When not interacting with Sbi-III, Sbi-IV inhibits the alternative pathway without complement consumption. The structure of Sbi-IV consists of a three-helix bundle fold.	1.01337e-26
NZ_CP013137.1\|WP_031927725.1\|1982381_1983740_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|273109	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	0
NZ_CP013137.1\|WP_000971544.1\|1980279_1981395_-\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	gnl\|CDD\|223234	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism].	9.08937e-138
NZ_CP013137.1\|WP_000615459.1\|1967048_1967780_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.20318e-144
NZ_CP013137.1\|WP_000825931.1\|1968476_1969256_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270429	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold. This subgroup includes cystine-binding domain of periplasmic receptor-dependent ATP-binding cassette transporters from Neisseria gonorrhoeae and Bacillus subtilis and their related proteins. Cystine is an oxidized dimeric form of cysteine that is required for optimal bacterial growth. In Bacillus subtilis, three ABC transporters, TcyJKLMN (YtmJKLMN), TcyABC (YckKJI), and YxeMNO are involved in uptake of cystine. Likewise, three uptake systems were identified in Salmonella enterica serovar Typhimurium, while in Escherichia coli, two transport systems seem to be involved in cystine uptake. Moreover, L-cystine limitation was shown to prevent virulence of Neisseria gonorrhoeae; thus, its L-cystine solute receptor (Ngo0372) may be suited as target for an antimicrobial vaccine. The cystine receptor belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.35689e-100
NZ_CP013137.1\|WP_001012216.1\|1965701_1966952_+\|FemA/FemB-family-glycyltransferase-FmhA	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	0
NZ_CP013137.1\|WP_000479576.1\|1967776_1968496_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.98247e-78
NZ_CP013137.1\|WP_001125208.1\|1971247_1971934_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184518	PRK14119, gpmA, phosphoglyceromutase; Provisional.	3.52864e-167
NZ_CP013137.1\|WP_058008224.1\|1977120_1978068_+\|bi-component-gamma-hemolysin-HlgCB-subunit-C	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	9.93427e-93

>NZ_CP013137.1|WP_000019122.1|1972259_1973126_-|cation-transporter
MSHNENLKLAQRGAYLSLIVYIILSIVKYVTGFVFNSAAVRADALNNMTDIIVSLAVIIGLKISIKPADRNHPYGHLKSENISSLLVSFVIMFVGIQVVIQNAPRLFKEDDIVPNAITIIVSLISGLVMLIVFAVNQRLAKRTKSSSLNSAAKDNLSDSLVSIGTAIGLIFTQIGFPIVDIILATLLGLLIVYTGFGIFKEAIFMLSDGFNETELEAYRNDILEVDEVQEVKSIKGRYHGSSVFIDVTIVVDANLSLVEAHQICDNVEHHLHKKGISSVYVHPEPDHL
>NZ_CP013137.1|WP_001125208.1|1971247_1971934_-|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL
>NZ_CP013137.1|WP_000762708.1|1970989_1971094_+|putative-metal-homeostasis-protein
MKLDLQTARRNLNSPNIKTRKRALKIIKQHKRAK
>NZ_CP013137.1|WP_058008222.1|1969376_1970816_-|multidrug-efflux-MFS-transporter-MdeA
MSKKQKLTMIITMLMGGFFGLLNETLLVTALPSIMKDFEISYTQVQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFLVGITIFFLGTLLGGLSPHFATLLVARIIQALGAGIMMPLMMTTILDVFQPYERGKYMGIFGLVIGLAPAIGPTLSGYLVEYFNWRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDFISVIFSVLGFGGLLYGTSSISEKGFDNPIVLVSMIGGIALVALFVLRQYRLSTPLLNFAVFKNKQFTVGIIIMGVTMVSMIGSETILPIFVQNLLHRSALDSGLTLLPGAIVMAFMSMTSGALYEKFGPRKLALVGMAIVVITTAYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMTHTMNQLKPEMNAHGSSMTNTVQQIAGSIGTAALITILSHASKNFSPTMSDYNGMNKIDMMNQIKVDTMLHGYHAGFLFALLITVVSFFCSFMLQGKKKEVDSRQ
>NZ_CP013137.1|WP_000825931.1|1968476_1969256_-|transporter-substrate-binding-domain-containing-protein
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKVDDETVQKFNDGLKKIEENGELAKIGKKWFGQDVSKSK
>NZ_CP013137.1|WP_000479576.1|1967776_1968496_-|amino-acid-ABC-transporter-permease
MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGYRS
>NZ_CP013137.1|WP_000615459.1|1967048_1967780_-|amino-acid-ABC-transporter-ATP-binding-protein
MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLLRMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLITVKKLKKDEARGKSLELLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQGAPEEMFNRPKTEELKRFLNVINEE
>NZ_CP013137.1|WP_001012216.1|1965701_1966952_+|FemA/FemB-family-glycyltransferase-FmhA
MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHKVDLKGDVHLVGVKDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKQNCLYVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDTLGYKHQGFPVGYDSMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKFRELPYFEEMQKLYDDHAMLKLAYIDLNEYLKTLQLKQQQLTAELSGVEEALEESPNSKKNKTKRTQLEQQLNSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPKYNAYMGAYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEYIGDFIKPIKPLLYKVKTYLNHKRR
>NZ_CP013137.1|WP_058008220.1|1965084_1965447_-|DUF4467-domain-containing-protein
MKRFVATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDGEVHYYAYNFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN
>NZ_CP013137.1|WP_000162805.1|1964466_1965066_-|DsbA-family-protein
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDDHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK
>NZ_CP013137.1|WP_001807148.1|1973608_1973728_-|hypothetical-protein
MLTNRLTSVNYVKKRLIQNIQRILSKEVLYGEMQWFANK
>NZ_CP013137.1|WP_000792566.1|1973822_1975133_+|B-domain-containing-protein
MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLHLKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKAPMDVQKHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVLSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKVLYAFYQNPKVVKAAITTAETASSIKNIFSSFTSFFK
>NZ_CP013137.1|WP_000594519.1|1975622_1976552_+|bi-component-gamma-hemolysin-HlgAB-subunit-A
MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK
>NZ_CP013137.1|WP_058008224.1|1977120_1978068_+|bi-component-gamma-hemolysin-HlgCB-subunit-C
MLRNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNTFVNRNYTVKYEVNWKTHEIKVKGQN
>NZ_CP013137.1|WP_000783428.1|1978069_1979047_+|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B
MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK
>NZ_CP013137.1|WP_000200954.1|1979098_1979566_-|QueT-transporter-family-protein
MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPAALLILAFFGIKKYFLGGLLSSVLLLIFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLVLASVLGSLVSRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR
>NZ_CP013137.1|WP_031927724.1|1979576_1980269_-|6-carboxyhexanoate--CoA-ligase
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQKLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSFGQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLHHYISFLESTPKQVVYETV
>NZ_CP013137.1|WP_000971544.1|1980279_1981395_-|pyridoxal-phosphate-dependent-aminotransferase-family-protein
MMFQEQIDLLQQKGLYRSLKSVGYIDRQYIEVENKRCTNYTSNDYLGLGQIAFDKDDFERFMRKYSYHLSSSRLISGSSTAYEEIETMLAGWLGYSACTILNSGYDANLALFNIFKNTNCVVFSDQENHASIIDGIKLSGLEKVIYKHLDIADLEKRLAEYPNQNIQKIIISDSVFSTNGDLVDIGQLVSLKHKYNATLILDVSHSFGIENYSNYQGIDILTSSLSKACGAYGGVILSSNDVKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLINADDRRTKLNSLSKYFNQKLKALNVNYNSSNSPIKFIEFDDIEAAENIHQTLLKHHVFTSYLRYPTVTKPMLRISLSYFHTEQDVDRLFEILHQED
>NZ_CP013137.1|WP_001046645.1|1981372_1982380_-|biotin-synthase-BioB
MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGICPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHISNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYKDRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFGSMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGGQPNQLDYDMINDLGFEIDYDTCENKENKNDVSRAN
>NZ_CP013137.1|WP_031927725.1|1982381_1983740_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLTSQKIYDAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRNLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_8

2034224-2034319

Orphan

Consensus_repeat	Method
CAACTGTATTCCTCTATACCTGTAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013137_8

>merge|NZ_CP013137|8|2034224-2034319|CRISPRCasFinder
CAACTGTATTCCTCTATACCTGTAATTTTAATTACTAGAGGCTCTTATGCAGTTGTTGCGAAGCAAGCAACTGTATTCCTCTATACCTGTAATTTT

>NZ_CP013137|8|8|2034224-2034319|CRISPRCasFinder
CAACTGTATTCCTCTATACCTGTAATTTT	AATTACTAGAGGCTCTTATGCAGTTGTTGCGAAGCAAG
CAACTGTATTCCTCTATACCTGTAATTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_000590515.1\|2025956_2026706_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224049
NZ_CP013137.1\|WP_000072454.1\|2023778_2024528_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	unknown
NZ_CP013137.1\|WP_001058842.1\|2032359_2033178_-\|D-histidine-(S)-2-aminobutanoyltransferase-CntL	unknown	unknown	gnl\|CDD\|176222
NZ_CP013137.1\|WP_000217469.1\|2040566_2041262_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP013137.1\|WP_058008232.1\|2031065_2032367_-\|staphylopine-dehydrogenase-CntM	unknown	unknown	gnl\|CDD\|226839
NZ_CP013137.1\|WP_001026116.1\|2034774_2035542_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP013137.1\|WP_001146762.1\|2038345_2038768_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP013137.1\|WP_001081678.1\|2033188_2034010_-\|histidine-racemase-CntK	unknown	unknown	gnl\|CDD\|223331
NZ_CP013137.1\|WP_000824927.1\|2035642_2036461_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181491
NZ_CP013137.1\|WP_000162200.1\|2039890_2040316_-\|DUF1433-domain-containing-protein	unknown	unknown	gnl\|CDD\|284628
NZ_CP013137.1\|WP_031927735.1\|2029324_2030923_-\|staphylopine-dependent-metal-ABC-transporter-substrate-binding-protein-CntA	unknown	unknown	gnl\|CDD\|274072
NZ_CP013137.1\|WP_001224379.1\|2042102_2042294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000202041.1\|2036695_2038234_+\|AbgT-family-transporter	unknown	unknown	gnl\|CDD\|367668
NZ_CP013137.1\|WP_031788452.1\|2042728_2042851_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_000472235.1\|2028376_2029312_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP013137.1\|WP_000584765.1\|2027510_2028380_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP013137.1\|WP_000220934.1\|2041561_2041843_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|377790
NZ_CP013137.1\|WP_000675402.1\|2024751_2025945_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP013137.1\|WP_000038226.1\|2039225_2039639_-\|DUF1433-domain-containing-protein	unknown	unknown	gnl\|CDD\|284628
NZ_CP013137.1\|WP_000173873.1\|2026698_2027514_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_000590515.1\|2025956_2026706_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.955e-107
NZ_CP013137.1\|WP_001026116.1\|2034774_2035542_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	7.05212e-25
NZ_CP013137.1\|WP_001058842.1\|2032359_2033178_-\|D-histidine-(S)-2-aminobutanoyltransferase-CntL	gnl\|CDD\|176222	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0.000230915
NZ_CP013137.1\|WP_000217469.1\|2040566_2041262_-\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	9.67028e-99
NZ_CP013137.1\|WP_058008232.1\|2031065_2032367_-\|staphylopine-dehydrogenase-CntM	gnl\|CDD\|226839	COG4408, COG4408, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP013137.1\|WP_000824927.1\|2035642_2036461_-\|SDR-family-oxidoreductase	gnl\|CDD\|181491	PRK08589, PRK08589, SDR family oxidoreductase.	0
NZ_CP013137.1\|WP_001146762.1\|2038345_2038768_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.64055e-29
NZ_CP013137.1\|WP_001081678.1\|2033188_2034010_-\|histidine-racemase-CntK	gnl\|CDD\|223331	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism].	5.02392e-73
NZ_CP013137.1\|WP_000162200.1\|2039890_2040316_-\|DUF1433-domain-containing-protein	gnl\|CDD\|284628	pfam07252, DUF1433, Protein of unknown function (DUF1433). This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.	3.48584e-33
NZ_CP013137.1\|WP_031927735.1\|2029324_2030923_-\|staphylopine-dependent-metal-ABC-transporter-substrate-binding-protein-CntA	gnl\|CDD\|274072	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein. Members of this family are periplasmic nickel-binding proteins of nickel ABC transporters. Most appear to be lipoproteins. This protein was previously (circa 2003) thought to mediate binding to nickel through water molecules, but is now thought to involve a chelating organic molecule, perhaps butane-1,2,4-tricarboxylate, acting as a metallophore. [Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP013137.1\|WP_000202041.1\|2036695_2038234_+\|AbgT-family-transporter	gnl\|CDD\|367668	pfam03806, ABG_transport, AbgT putative transporter family.	0
NZ_CP013137.1\|WP_000472235.1\|2028376_2029312_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.46808e-99
NZ_CP013137.1\|WP_000584765.1\|2027510_2028380_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.26003e-84
NZ_CP013137.1\|WP_000220934.1\|2041561_2041843_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|377790	pfam07205, DUF1413, Domain of unknown function (DUF1413). This family consists of several hypothetical bacterial proteins which seem to be specific to firmicute species. Members of this family are typically around 100 residues in length. The function of this family is unknown.	2.36664e-16
NZ_CP013137.1\|WP_000675402.1\|2024751_2025945_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.36995e-79
NZ_CP013137.1\|WP_000038226.1\|2039225_2039639_-\|DUF1433-domain-containing-protein	gnl\|CDD\|284628	pfam07252, DUF1433, Protein of unknown function (DUF1433). This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.	7.4923e-35
NZ_CP013137.1\|WP_000173873.1\|2026698_2027514_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	6.55691e-118

>NZ_CP013137.1|WP_001081678.1|2033188_2034010_-|histidine-racemase-CntK
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMPQAHRVVETTINMGNHSWKAIEIIYETYVHYVIPVKQVTTEIQHLVETYVREQQWNHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGGSILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE
>NZ_CP013137.1|WP_001058842.1|2032359_2033178_-|D-histidine-(S)-2-aminobutanoyltransferase-CntL
MNNFNNEIKLILQQYLEKFEAHYERVLQDDQYIEALETLMDDYSEFILNPIYEQQFNAWRDVEEKAQLIKSLQYITAQCVKQVEVIRARRLLDGQASTTGYFDNIEHCIDEEFGQCSIASNDKLLLVGSGAYPMTLIQVAKETGASVIGIDIDPLAVDLGRRIVNVLAPNEDITITDQKVSELKDIKDVTHIIFSSTIPLKYSILEELYDLTNENVVVAMRFGDGIKAIFNYPSQETAEDKWQCVNKHMRPQQIFDIALYKKAAIKVGITDV
>NZ_CP013137.1|WP_058008232.1|2031065_2032367_-|staphylopine-dehydrogenase-CntM
MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLYQAYKKEKQFEVKIQNEAHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISPTFGSQMIVEQFMSKFSQDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNSTMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVYKLFPEGPITMTLIREMRLMWKEMMAILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEHFEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPSEDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKAMHQDQQLSSQFNTNLFEGDKALITKFLEINRTLS
>NZ_CP013137.1|WP_031927735.1|2029324_2030923_-|staphylopine-dependent-metal-ABC-transporter-substrate-binding-protein-CntA
MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAESMIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTTKDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKGETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQAIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKGKDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTSGDYDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFKIQNGKERSDAYKNILKQVDDEGIFIPISYGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
>NZ_CP013137.1|WP_000472235.1|2028376_2029312_-|ABC-transporter-permease
MFKFILKRIALMFPLMIVVSFMTFLLTYITNENPAVTILHAQGTPNVTPELIAETNEKYGFNDPLLIQYKNWLLEAMQFNFGTSYITGDPVAERIGPAFMNTLKLTIISSVMVMITSIILGVVSALKRGKFTDRAIRSVAFFLTALPSYWIASILIIYVSVKLNILPTSGLTGPESYILPVIVITIAYAGIYFRNVRRSMVEQLNEDYVLYLRASGVKSITLMLHVLRNALQVAVSIFCMSIPMIMGGLVVIEYIFAWPGLGQLSLKAILEHDFPVIQAYVLIVAVLFIVFNTLADIINALLNPRLREGAR
>NZ_CP013137.1|WP_000584765.1|2027510_2028380_-|ABC-transporter-permease
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGMSFQHLLGTDHLGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVMQYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTHPEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS
>NZ_CP013137.1|WP_000173873.1|2026698_2027514_-|ABC-transporter-ATP-binding-protein
MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGKSITCKSIVGLNPERLRVTGDITFDGKPMLSLSEAQLKKYRGKDIAMVMQQGSRAFDPSTTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLMIALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIADRVVVMKNGQLIEHGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD
>NZ_CP013137.1|WP_000590515.1|2025956_2026706_-|ABC-transporter-ATP-binding-protein
MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEKPDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKDVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTRELIEKQLSF
>NZ_CP013137.1|WP_000675402.1|2024751_2025945_-|MFS-transporter
MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRPWAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGIIDALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRVTFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVSLGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVGAIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPISDLVGFKWMYLICGMLVIVIMIMSLLKKPTPRPANSL
>NZ_CP013137.1|WP_000072454.1|2023778_2024528_+|CPBP-family-intramembrane-metalloprotease
MSNTNKHYIEEEYATEQSRFFKRDIGFIFLYIFLVNILPIIIVFLTFGLVAVFTQQAPWGFSFPISMNISYLLAVIISLAIFRRMHEDAFVPMIRSQIVASAKYKWHILISFTLSIVLFLLLNHFDIFALNVDSFTVFDIYPLIREYGSISLIAIFSLTIILNTLICQLIFRHILIQELSRLMPLKITIVLSVILETLYYYPYINTWWEFIPALILASSATYLYLKSNRNFMVSYFYQLAVILVLHIFM
>NZ_CP013137.1|WP_001026116.1|2034774_2035542_-|MBL-fold-metallo-hydrolase
MNIRHIRNATAVIEYGGKRILIDPMLSDKGAFEPFPNSPRQDENNPLVELPLAIEDIINNIDLVILTHLHIDHFDPKAIEVLPKDIKIYTQNEADASEVEGYDFTNVSVFNDVTHIGEIELIKTDAQHGHGEILKMTGHVHGLVLKHSEEPTLYLAADTVWFDGVEKTLKAHHPDVVVLNGGANQFFEGGPLVMDEHDVLKVAHTLPLAQIVVVHMEAVNHWHLSREELNEFINSNDLGNRVVVPNDGELLTFEK
>NZ_CP013137.1|WP_000824927.1|2035642_2036461_-|SDR-family-oxidoreductase
MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGDKAKAYIVDIASEQQIDNFASEIREQFEHVDVLFNNAGVDNAAGRIHEYPTDVYDKIMNVDMRGTFLMTKMMLPLMMTKGGSIVNTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDNLTGTCEDKEGKAFRENQKWMTPLGRLGKPEEVGKLVVFLASDESSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE
>NZ_CP013137.1|WP_000202041.1|2036695_2038234_+|AbgT-family-transporter
MTSKHQQKGSIVNRFLNSVEKIGNKLPDPSVLFFLMCVGLAIMTWVISLFNVSVKHPGTHQTIYIKNIISHDGFTMIMNDTIKNFSEFPALGLVLAVMIGIGVAEKTGYFDKLMISVVNRAPRFLILPTIILIGILGSTAGDAATIILPPLAAMLFIKIGYHPIAGLTMAYASAVGGFAANIVVGMQDALVYSFTEPSTRIVSDSIKTNVAMNWYFIAASVVVLLPTILLVTTKLIIPRLGQYDNRLMHDDHEETSSHITDKEAHALKWANISFIVTIILLIITAIPEHSFLRNAKTGSLLDDAPLINGVGLIILVVFLVPGLVYGILSKEIKNTKDLGKMFGDAVGSMGTFIVIVFFAAQLLAYLKWSNLGIIAAVKGAKLLEHQNGIVLILGIIVLSAMVNMLIGSASAKWGILGPIFVPMLILIGFHPAFTQVIYRVGDSITNPITPMMPYLPLLLTYAQKYDKRMKLGALLSSLMPYSIALSIMWTVFVIIWFLLGIPVGPGGPIFVK
>NZ_CP013137.1|WP_001146762.1|2038345_2038768_-|carboxymuconolactone-decarboxylase-family-protein
MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKELGVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDLVFVVNQINGWNRLNIISDKL
>NZ_CP013137.1|WP_000038226.1|2039225_2039639_-|DUF1433-domain-containing-protein
MSKKKILILTSIMLIILISVAGIHLKMKYDEKEKQKAIYYKEQQERITLYLKHNTKEPNTIKSVHFTNLETSPMGSAVIEGYINENKKDDFVAYASPENNFQFVGDIVLSKNLSEIIKIKTKSPDEIKEELDKKEGH
>NZ_CP013137.1|WP_000162200.1|2039890_2040316_-|DUF1433-domain-containing-protein
MTKKHVFIIIGVILCICIVATVIYLKVKYDEKEKQKALYYKEQQERITLYLKHNTKEPNTIKTVHFTSLKTGPMGDAVIEGYINENKKADFVAYGSPEENYQFTGGLTGSNEVLGKLKNAENLKSPEKIKEEINKKKNTKQ
>NZ_CP013137.1|WP_000217469.1|2040566_2041262_-|SDR-family-oxidoreductase
MTVLTDKVAVVTGAGSGIGEAIATLLHEEGVKVILAGRNKDKLQNVANQLAQDSVKVVPTDVTKKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQDIAEAVLYALTQPKHVNVNEITVRPV
>NZ_CP013137.1|WP_000220934.1|2041561_2041843_+|single-stranded-DNA-binding-protein
MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAEKAFRHEVKKLDDVRMPFSSAHDAQVKLYNVVYSYNGIKRNFKQVENEGF
>NZ_CP013137.1|WP_001224379.1|2042102_2042294_-|hypothetical-protein
MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPYIDAERLYHFAMERKSLVTN
>NZ_CP013137.1|WP_031788452.1|2042728_2042851_+|hypothetical-protein
MSYIIKFTFKFFEMTTYISQLTLDIELVSSELLVILSGFI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_9

2507425-2507542

Orphan

Consensus_repeat	Method
GGCCAAGTATCATATGGGCTCGCCCAACACAAAACAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013137_9

>merge|NZ_CP013137|9|2507425-2507542|CRISPRCasFinder
GGCCAAGTATCATATGGGCTCGCCCAACACAAAACAAGCCAAGCAATACAAACGCATATAACGTAACAACACATGCAAACGGCCAAGTATCATATGGGCTCGCCCGACACAAAACAAG

>NZ_CP013137|9|9|2507425-2507542|CRISPRCasFinder
GGCCAAGTATCATATGGGCTCGCCCAACACAAAACAAG	CCAAGCAATACAAACGCATATAACGTAACAACACATGCAAAC
GGCCAAGTATCATATGGGCTCGCCCGACACAAAACAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_001008389.1\|2513351_2514857_-\|acyl--CoA-ligase	unknown	unknown	gnl\|CDD\|223395
NZ_CP013137.1\|WP_000215216.1\|2520028_2520385_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|225730
NZ_CP013137.1\|WP_031927850.1\|2522040_2522148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_072357665.1\|2516900_2518043_+\|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|225217
NZ_CP013137.1\|WP_000911657.1\|2502055_2502811_+\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_CP013137.1\|WP_000154527.1\|2509580_2511842_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP013137.1\|WP_000773989.1\|2520541_2520715_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_058008318.1\|2508366_2509551_-\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP013137.1\|WP_000837098.1\|2498227_2499196_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270264
NZ_CP013137.1\|WP_000894660.1\|2499783_2502033_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP013137.1\|WP_000211600.1\|2505072_2505417_-\|complement-inhibitor-SCIN-family-protein	unknown	unknown	gnl\|CDD\|371594
NZ_CP013137.1\|WP_000822609.1\|2503145_2504909_+\|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein	unknown	unknown	gnl\|CDD\|227120
NZ_CP013137.1\|WP_000127994.1\|2496674_2498231_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP013137.1\|WP_001008722.1\|2494185_2495565_+\|hexose-6-phosphate:phosphate-antiporter	unknown	unknown	gnl\|CDD\|236564
NZ_CP013137.1\|WP_000954801.1\|2520740_2521886_-\|nitric-oxide-dioxygenase	unknown	unknown	gnl\|CDD\|237337
NZ_CP013137.1\|WP_000766048.1\|2492133_2493102_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP013137.1\|WP_000603755.1\|2493458_2493953_-\|isoprenylcysteine-carboxyl-methyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224669
NZ_CP013137.1\|WP_000477521.1\|2495923_2496682_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|227095
NZ_CP013137.1\|WP_000142183.1\|2512028_2513240_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173840
NZ_CP013137.1\|WP_001803661.1\|2514882_2516460_-\|acyl-CoA:acetate/3-ketoacid-CoA-transferase	unknown	unknown	gnl\|CDD\|227016

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_001008389.1\|2513351_2514857_-\|acyl--CoA-ligase	gnl\|CDD\|223395	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	7.37356e-152
NZ_CP013137.1\|WP_000215216.1\|2520028_2520385_-\|DUF488-domain-containing-protein	gnl\|CDD\|225730	COG3189, COG3189, Uncharacterized conserved protein [Function unknown].	1.31733e-56
NZ_CP013137.1\|WP_072357665.1\|2516900_2518043_+\|PrsW-family-intramembrane-metalloprotease	gnl\|CDD\|225217	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones].	5.25467e-71
NZ_CP013137.1\|WP_000911657.1\|2502055_2502811_+\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	1.12318e-115
NZ_CP013137.1\|WP_000154527.1\|2509580_2511842_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	2.64368e-91
NZ_CP013137.1\|WP_058008318.1\|2508366_2509551_-\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	1.19747e-179
NZ_CP013137.1\|WP_000837098.1\|2498227_2499196_-\|extracellular-solute-binding-protein	gnl\|CDD\|270264	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily. The substrate domain of this group shows a high homology to the periplasmic component of ferric iron transporter (Fbp), but its biochemical characterization has not been performed. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99186e-107
NZ_CP013137.1\|WP_000894660.1\|2499783_2502033_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP013137.1\|WP_000211600.1\|2505072_2505417_-\|complement-inhibitor-SCIN-family-protein	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	8.03531e-42
NZ_CP013137.1\|WP_000822609.1\|2503145_2504909_+\|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein	gnl\|CDD\|227120	COG4781, COG4781, Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase [Energy production and conversion].	1.26036e-130
NZ_CP013137.1\|WP_000127994.1\|2496674_2498231_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	8.4789e-75
NZ_CP013137.1\|WP_001008722.1\|2494185_2495565_+\|hexose-6-phosphate:phosphate-antiporter	gnl\|CDD\|236564	PRK09556, uhpT, hexose-6-phosphate:phosphate antiporter.	0
NZ_CP013137.1\|WP_000954801.1\|2520740_2521886_-\|nitric-oxide-dioxygenase	gnl\|CDD\|237337	PRK13289, PRK13289, NO-inducible flavohemoprotein.	1.57688e-123
NZ_CP013137.1\|WP_000766048.1\|2492133_2493102_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.16798e-48
NZ_CP013137.1\|WP_000603755.1\|2493458_2493953_-\|isoprenylcysteine-carboxyl-methyltransferase-family-protein	gnl\|CDD\|224669	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown].	1.56746e-67
NZ_CP013137.1\|WP_000477521.1\|2495923_2496682_-\|response-regulator-transcription-factor	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.32682e-86
NZ_CP013137.1\|WP_000142183.1\|2512028_2513240_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	4.83434e-96
NZ_CP013137.1\|WP_001803661.1\|2514882_2516460_-\|acyl-CoA:acetate/3-ketoacid-CoA-transferase	gnl\|CDD\|227016	COG4670, COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism].	0

>NZ_CP013137.1|WP_000211600.1|2505072_2505417_-|complement-inhibitor-SCIN-family-protein
MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAYQKRDILAAHYIAKSAIRTKNLDQMTKAKHRLESIYDSISNPLHSQNN
>NZ_CP013137.1|WP_000822609.1|2503145_2504909_+|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIRILFE
>NZ_CP013137.1|WP_000911657.1|2502055_2502811_+|pyruvate-formate-lyase-activating-protein
MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKISEPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHTCLDTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARKLSDMKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLGIAYELEDVEAPDDEAVKAAYRYVNFKGKIPVEL
>NZ_CP013137.1|WP_000894660.1|2499783_2502033_+|formate-C-acetyltransferase
MLETNKNHATAWQGFKNGRWNRHVDVREFIQLNYTLYEGNDSFLAGPTEATSKLWEQVMQLSKEERERGGMWDMDTKVASTITSHDAGYLDKDLETIVGVQTEKPFKRSMQPFGGIRMAKAACEAYGYELDEETEKIFTDYRKTHNQGVFDAYSREMLNCRKAGVITGLPDAYGRGRIIGDYRRVALYGVDFLMEEKMHDFNTMSTEMSEDVIRLREELSEQYRALKELKELGQKYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTSTFLDIYAERDLKAGVITESEVQEIIDHFIMKLRIVKFARTPDYNELFSGDPTWVTESIGGVGIDGRPLVTKNSFRFLHSLDNLGPAPEPNLTVLWSVRLPDNFKTYCAKMSIKTSSIQYENDDIMRESYGDDYGIACCVSAMTIGKQMQFFGARANLAKTLLYAINGGKDEKSGAQVGPNFEGINSEVLEYDEVFKKFDQMMDWLAGVYINSLNVIHYMHDKYSYERIEMALHDTEIVRTMATGIAGLSVAADSLSAIKYAQVKPIRNEEGLVVDFEIEGDFPKYGNNDDRVDDIAVDLVERFMTKLRSHKTYRDSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSSLSSVAKIPYDCCKDGISNTFSIVPKSLGKEPEDQNRNLTSMLDGYAMQCGHHLNINVFNRETLIDAMEHPEEYPQLTIRVSGYAVNFIKLTREQQLDVISRTFHESM
>NZ_CP013137.1|WP_000837098.1|2498227_2499196_-|extracellular-solute-binding-protein
MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRPILNDFEKQEHVKIEIKHGSTQVLLSNLHNEDLSERGDVFMGGVLSETIDHPEDFVPYQDISVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVHQFQDHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ
>NZ_CP013137.1|WP_000127994.1|2496674_2498231_-|sensor-histidine-kinase
MTAYKPYRHQLRRSLFASTIFPVFLVIIIGLVSFYAIYIWIEHRTIHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPATLYYELSGPNQFITNNYEHLNTKNMYLFSTHRLKFKNSTYMLKIYMANTPRLSEIKKDSRQFALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHENIEDGITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPLKNNSELEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITLSPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIKLHIESSEEARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGIGMSSSRLQYVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYKIPLSRGNVDV
>NZ_CP013137.1|WP_000477521.1|2495923_2496682_-|response-regulator-transcription-factor
MFKVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLIQQHQPELVITDIRMPRKNGVDLLNDIAHLDCNVIILSSYDDFEYMKAGIQHHVLDYLLKPVDHAQLEVILGRLVRTLLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIKQSYQTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSLQLLDRHYKHYEIADKVGFSEYKMFSYHFKKYLQMSPSDYCKQAK
>NZ_CP013137.1|WP_001008722.1|2494185_2495565_+|hexose-6-phosphate:phosphate-antiporter
MNFFDIHKIPNKGIPLSVQRKLWLRNFMQAFFVVFFVYMAMYLIRNNFKAAQPFLKEEIGLSTLELGYIGLAFSITYGLGKTLLGYFVDGRNTKRIISFLLILSAITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYSTISRWAPRTKRGRYLGFWNTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGIATLFIGKDDPEELGWNRAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNVFVYIVRIGIDNWAPLYVSEHLHFSKGDAVNTIFYFEIGALVASLLWGYVSDLLKGRRAIVAIGCMFMITFVVLFYTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVANGMTGSFAYLFGDSMAKVGLAAIADPTRNGLNIFGYTLSGWTDVFIVFYVALFLGMILLGIVAFYEEKKIRSLKI
>NZ_CP013137.1|WP_000603755.1|2493458_2493953_-|isoprenylcysteine-carboxyl-methyltransferase-family-protein
MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLAITHVLIYVLAGVEAFINKDTFSFANGIGLVILIFAYIMLFMVIKTLGGIWTLKLFILPNHPIIKSGLYKITKHPNYFLNIIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEKLMNI
>NZ_CP013137.1|WP_000766048.1|2492133_2493102_+|sugar-phosphate-isomerase/epimerase
MKLGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMKSITDRGLQISGFSCHNNPISPDPTEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKEQDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYGLTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMWWA
>NZ_CP013137.1|WP_058008318.1|2508366_2509551_-|thiolase-family-protein
MQEAYIVAYGRSAAAKAKQGALFHERPDDVAAKVLQGVLKRIDGKFNKNMIEDVIVGTAFPEGLQGQNIARTIALRTGLSDTVPGQTVNRYCSSGLQTIAIAANQIMAGQGDILVAGGVELMSAVPMGGNEPTNNPTLQYDDIGASYPMGLTAENVASQFDVSREDQDAYAVRSHQRVYDAQRDGRFKDEIIPIQVNSVEYTNAGPKVHTNIFDQDEFIRPDTTMEALAKLRTVFKADGTVTAGTSAPLSDGAGFVVLMSGDKVKELDVTPIARFVGYKAVGVDPKIMGIGPAYAIPEVLSLSNLSVEDIDLIELNEAFASQTIASIKEVGLDISRTNVNGGAIALGHPLGATGAMLTARLLNEMGRRPDSRYGMVTMCIGVGMGAAAIFEYVR
>NZ_CP013137.1|WP_000154527.1|2509580_2511842_-|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDIVVDKNDPNLIAKKSYDKITDKKRPLLFDLNLASHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQQVLQHAKEDALFATNTSGIPINAIAQAFNEKDQERFFGLHFFNPPRIMKLVELIPTSHTKESIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVDALTGQAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLFENGALGRKTKQGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLVHNLDVIFNAQDEAGLFLWETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVKTRMEDELGDLPQWISDLDGGFYKQDETIEYATPVSHFVKDELWDKGDAKLSVTHDDQLLLKLQSKNNVITDEFNDALVDAIDLLENDHYTSMVIYADGNNFSVGANLFLMKKAHEDGLVDDVVAQSIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYIGLVEAGVGLLPSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARRYGYLRDTDTIIFNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKALIQGQLDAQRRGHFISDHDYHIALNIATILAGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYERIAHMLKTGKPLRN
>NZ_CP013137.1|WP_000142183.1|2512028_2513240_-|acyl-CoA-dehydrogenase-family-protein
MTFEKETVLKTLFPEDVLSIAKGLTDGEVEFLQQVDSLLESKYRENINQHWIDATVPEDYFKDLGELNYFNNPLLYEDRPNAKMPSQLFQFFMSYLLARFDISLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHELRTCFALTEPEHGSDVAGGLETVAERQGDTWVINGEKKWIGGAHVSDVIPVFAVNKETGKPHCFVVKPEQDGVDIEVIDNKIALRIVPNALIKLTNVKVNEADRLQNITSFKDIAKILYSTRAGVAYMATGGMAGALRATLDYVTERKQFGKPISKYQLIQEKLAMMQGNLAQAMATCAQLANMQAHGEYDEVATSTAKMMNALRLRETVAMGRGITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVIGRALTGDSAFV
>NZ_CP013137.1|WP_001008389.1|2513351_2514857_-|acyl--CoA-ligase
MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNLLHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHPTFIIMIPTMYYSTLRASNFNPENFKAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTEAPLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPSGEIGELAIKAKNVTPGYWNKPAETAKAFHGRYLLTGDLAKMDDDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYAEILDQHMRSRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL
>NZ_CP013137.1|WP_001803661.1|2514882_2516460_-|acyl-CoA:acetate/3-ketoacid-CoA-transferase
MEVTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLAQHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNNDIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVTINDETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNTKANHGKVIVQVKALVDDYQLKPNEVVIPGNLVDYVYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEPALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDVQPILDVGIFGGFVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLNGCGGFIDITQSVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQYSQSLEQEVYFVTDRAVFELTNQGLKLIEIAPGLDLHKDILNQMAFKPIIADHLKLIDTSIYKEKWGQLKQSIHKV
>NZ_CP013137.1|WP_072357665.1|2516900_2518043_+|PrsW-family-intramembrane-metalloprotease
MSSAITQSTKTSDIHNESIDKQMEDKAHETAQNADLKNEARSLFDNATKSIGRLAGNDESLNLNLKDMFSEVFKPHTKNEADEIFIAGTAKTTPAICDISEEWGKPWLFSRVFIAFTVTFIGLWVMAAIFNNTNAIPGLIFIGALTVPLSGLFFFYESNAFKNISIFEVIIMFFIGGVFSLLSTMVLYRFVVFSDQFERFGSLTFFDAFLVGLVEETGKALIIVYFVNKLKTNKILNGLLIGAAIGAGFAVFESAGYILNFALGENVPLLDIVFTRAWTAIGGHLVWSAIVGAAIVIVKEQHGFEFKDIFDKRFLIFFLSAVGLHGIWDTSLTILGSDTLKIFILIVIVWILVFILMGAGLKQVNLLQKEFKEQQKKVDE
>NZ_CP013137.1|WP_000215216.1|2520028_2520385_-|DUF488-domain-containing-protein
MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDIAPSTELRQWFQHDPKLFGAFKEKYEKELRDQDAQKDAFEKLKDIVNQHNHVLLLYAAKDTKHNQAVVLQQLLNT
>NZ_CP013137.1|WP_000773989.1|2520541_2520715_-|hypothetical-protein
MKLNQRYVKVFALYFVSIVTANIIVKNNNLIKTLIQTIAGYTVFAVGLKYLTKRKNK
>NZ_CP013137.1|WP_000954801.1|2520740_2521886_-|nitric-oxide-dioxygenase
MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETDAYDFSQYIPGQYITVDVSSDKLPYRAKRHYSIVSGDKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPFKDNFNSIANHYDNAKLYTHLKGEQGYIGAEELKAFLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV
>NZ_CP013137.1|WP_031927850.1|2522040_2522148_+|hypothetical-protein
MYVCTPTIARIYLTNSKNIVVFLEKSKHDNKNVKV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013137_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013137_10

2795951-2796040

Unclear

Consensus_repeat	Method
AGTTGGGGTGTGGGCCCCAACACAGAAGCTG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP013137_10

>merge|NZ_CP013137|10|2795951-2796040|CRISPRCasFinder
AGTTGGGGTGTGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACGATAAAGTGCAAGTTGGGGTGTGGGCCCCAACATAGAAGCTG

>NZ_CP013137|10|10|2795951-2796040|CRISPRCasFinder
AGTTGGGGTGTGGGCCCCAACACAGAAGCTG	ACGAAAAGTCAGCTTACGATAAAGTGCA
AGTTGGGGTGTGGGCCCCAACATAGAAGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013137.1\|WP_001176701.1\|2791537_2792833_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|366502
NZ_CP013137.1\|WP_000649791.1\|2783394_2783967_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
NZ_CP013137.1\|WP_000167928.1\|2798522_2799326_+\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|238380
NZ_CP013137.1\|WP_000951460.1\|2788988_2790182_+\|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|226465
NZ_CP013137.1\|WP_000551283.1\|2792837_2793377_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP013137.1\|WP_001154302.1\|2799303_2799669_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|238298
NZ_CP013137.1\|WP_000154242.1\|2783966_2787473_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP013137.1\|WP_000148607.1\|2796314_2797196_+\|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl\|CDD\|234643
NZ_CP013137.1\|WP_001790128.1\|2800535_2800628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013137.1\|WP_058008363.1\|2793634_2795728_+\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|273520
NZ_CP013137.1\|WP_001234988.1\|2790178_2790442_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP013137.1\|WP_000057597.1\|2797374_2798307_+\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_CP013137.1\|WP_031927781.1\|2787462_2788989_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_CP013137.1\|WP_000792417.1\|2790459_2790852_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|225471
NZ_CP013137.1\|WP_000021445.1\|2790956_2791358_+\|RNA-binding-protein-S1	unknown	unknown	gnl\|CDD\|236305
NZ_CP013137.1\|WP_001288202.1\|2800680_2802168_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP013137.1\|WP_000613714.1\|2799665_2800142_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872

Protein	Function_ID	Function_description	E-value
NZ_CP013137.1\|WP_001176701.1\|2791537_2792833_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|366502	pfam01171, ATP_bind_3, PP-loop family. This family of proteins belongs to the PP-loop superfamily.	3.10271e-78
NZ_CP013137.1\|WP_000649791.1\|2783394_2783967_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	5.81135e-97
NZ_CP013137.1\|WP_000167928.1\|2798522_2799326_+\|dihydropteroate-synthase	gnl\|CDD\|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	1.16187e-122
NZ_CP013137.1\|WP_000951460.1\|2788988_2790182_+\|nucleotide-pyrophosphohydrolase	gnl\|CDD\|226465	COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only].	0
NZ_CP013137.1\|WP_000551283.1\|2792837_2793377_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	4.50006e-94
NZ_CP013137.1\|WP_001154302.1\|2799303_2799669_+\|dihydroneopterin-aldolase	gnl\|CDD\|238298	cd00534, DHNA_DHNTPE, Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenotype and the fact that folX is not present in H. influenza. In addition both enzymes have been shown to be able to compensate for the other's activity albeit at slower reaction rates. The functional enzyme for both is an octamer of identical subunits. Mammals lack many of the enzymes in the folate pathway including, DHNA and DHNTPE.	1.74147e-48
NZ_CP013137.1\|WP_000154242.1\|2783966_2787473_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP013137.1\|WP_000148607.1\|2796314_2797196_+\|Hsp33-family-molecular-chaperone-HslO	gnl\|CDD\|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	1.29884e-159
NZ_CP013137.1\|WP_058008363.1\|2793634_2795728_+\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP013137.1\|WP_001234988.1\|2790178_2790442_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	2.63429e-32
NZ_CP013137.1\|WP_000057597.1\|2797374_2798307_+\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	8.67288e-168
NZ_CP013137.1\|WP_031927781.1\|2787462_2788989_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	7.21495e-87
NZ_CP013137.1\|WP_000792417.1\|2790459_2790852_+\|septum-formation-initiator-family-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	3.2193e-21
NZ_CP013137.1\|WP_000021445.1\|2790956_2791358_+\|RNA-binding-protein-S1	gnl\|CDD\|236305	PRK08582, PRK08582, RNA-binding protein S1.	4.42227e-78
NZ_CP013137.1\|WP_001288202.1\|2800680_2802168_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP013137.1\|WP_000613714.1\|2799665_2800142_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	9.12434e-73

>NZ_CP013137.1|WP_058008363.1|2793634_2795728_+|ATP-dependent-zinc-metalloprotease-FtsH
MQKAFRNVLVIVIIGVIIFGLFSYLNGNGNMPKQLTYNQFTEKLEKGDLKTLEIQPQQNVYMVSGKTKNDEDYSSTILYNNEKELQKITDAAKKQNGVKLTIKEEEKQSVFVSILSTLIPVVVIALLFIFFLSQAQGGGSGGRMMNFGKSKAKMYDNNKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKEMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFDNAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAVREGKKKIDMRDIEEATDRVIAGPAKKSRVISKKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIVPRGQAGGYAMMLPKQDRFLMTEQELLDKICGLLGGRVSEDINFNEVSTGASNDFERATQIARSMVTQYGMSKKLGPLQFGHSNGQVFLGKDMQGEPNYSSQIAYEIDKEVQRIVKEQYERCKQILLEHKEQLILIAETLLTEETLVAEQIQSLFYEGKLPEIDYDAAKVVKDVDSEFNDGKFGKSYEEIRKEQLEDGQRDESEDRKEEKDIAEDKKEADKSDEKDEPAHRQAPNIEKPYDPNHPDNK
>NZ_CP013137.1|WP_000551283.1|2792837_2793377_+|hypoxanthine-phosphoribosyltransferase
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
>NZ_CP013137.1|WP_001176701.1|2791537_2792833_+|tRNA-lysidine(34)-synthetase-TilS
MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLKDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLDDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERYHIPYFEDESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQWHDEQYDILQYSAKQFIQEFVKFDEQSKYLEVSRQSFNDLPNSLKMVVLDCLLSKYYELFNISAKTYEEWFKQFSSKKAQFSINLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIEKPGNYIFNKYRLEIHSNLPKCLFPLSVRTRQSGDTFKLNGRDGYKKVNRLFIDCKVQQWVRDQMPIVLDKQQRIIAVGDLYQQQTIKQWIIISKNGDE
>NZ_CP013137.1|WP_000021445.1|2790956_2791358_+|RNA-binding-protein-S1
MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVENVEEHLSVGDEVDVKVLSIADDGKISLSIKKAKDRPRRQHTSKPSHQKPVQKAEDFEKKLSNFLKDSEDKLTSIKRQTESRRGGKGSRR
>NZ_CP013137.1|WP_000792417.1|2790459_2790852_+|septum-formation-initiator-family-protein
MKNKVEHIENQYTSQENKKKQRQKMKMRVVRRRITVFAGVLLAIIVVLSILLVVQKHRNDIDAQERKAKEAQFQKQQNEEIALKEKLNNLNDKDYIEKIARDDYYLSNKGEVIFRLPEDKDSSSSKSSKK
>NZ_CP013137.1|WP_001234988.1|2790178_2790442_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRLIKRRTLAKEVSDQGRITINGNVAKAGSDVKVEDVLTIRFGQKLVTVKVTALNEHASKDNAKGMYEIIEERRLEEA
>NZ_CP013137.1|WP_000951460.1|2788988_2790182_+|nucleotide-pyrophosphohydrolase
MAHTITIVGLGNYGIDDLPLGIYKFLKTQNKVYARTLDHPVIESLQDELTFQSFDHVYETHDQFEDVYNDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLITQVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATEVIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT
>NZ_CP013137.1|WP_031927781.1|2787462_2788989_+|polysaccharide-biosynthesis-protein
MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNAIPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAYMMGDSHLTPMIQAASLSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTIAILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDSVTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVLMNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMDMALLQAQHAVRPIFVGMMAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVTRKYHLHAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRITGLIELLCAAVLGIIALFFYIFRFNVLTYKELTYLPFGSKLYQIKKGRR
>NZ_CP013137.1|WP_000154242.1|2783966_2787473_+|transcription-repair-coupling-factor
MTILTTLIKEDNHFQDLNQVFGQANTLVTGLSPSAKVTMIAEKYAQSNQQLLLITNNLYQADKLETDLLQFVDAEELYKYPVQDIMTEEFSTQSPQLMSERIRTLTALAQGKKGLFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGYKRESVVSHIGEFSLRGGIIDIFPLIGEPIRIELFDTEIDSIRDFDVETQRSKDNIEEVDITTASDYIITEEVISHLKEELKTAYENTRPKIDKSVRNDLKETYESFKLFESTYFDHQILRRLVAFMYETPSTIIDYFQKDAIIAVDEFNRIKETEESLTVESDTFISNIIESGNGFIGQSFIKYDDFETLIEGYPVTYFSLFATTMPIKLNHIIKFSCKPVQQFYGQYDIMRSEFQRYVNQNYHIVVLVETETKVERMQAMLSEMHIPSITKLHRSMSSGQAVIIEGSLSEGFELPDMGLVVITERELFKSKQKKQRKRTKAISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGSEWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIKEPESEVPEVEVDLNLDAYLPTEYIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHSGITLIKDKGKIIDIHLSVKATENIDGEVLFKATQPLGRTMKVGVQNNAMTITLTKQNQWLDSLKFLVKCIEESMRISDEA
>NZ_CP013137.1|WP_000649791.1|2783394_2783967_+|aminoacyl-tRNA-hydrolase
MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDHVMNEFNGEVK
>NZ_CP013137.1|WP_000148607.1|2796314_2797196_+|Hsp33-family-molecular-chaperone-HslO
MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAMGRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNEQGKLDVRRAVGTNGSIMVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQTPSSVGLGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMTPVSKLIEQGLTPEGLLNEILGKDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGNKYKYTEEELNVLLESLV
>NZ_CP013137.1|WP_000057597.1|2797374_2798307_+|cysteine-synthase-A
MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEVVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD
>NZ_CP013137.1|WP_000167928.1|2798522_2799326_+|dihydropteroate-synthase
MTKTKIMGILNVTPDSFSDGGKFNNVESAVTRVKAMMDEGADIIDVGGASTRPGHEMISLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDIINDQWAGLYDHRMFQVVAKYDAEIVLMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGISSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS
>NZ_CP013137.1|WP_001154302.1|2799303_2799669_+|dihydroneopterin-aldolase
MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRENK
>NZ_CP013137.1|WP_000613714.1|2799665_2800142_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGINVFNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRVRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVIEPRSKLKVKDLVFVDDSVKRYK
>NZ_CP013137.1|WP_001790128.1|2800535_2800628_+|hypothetical-protein
MVNDKVLETSKEMYVEQKCLIFYKTLKENV
>NZ_CP013137.1|WP_001288202.1|2800680_2802168_+|lysine--tRNA-ligase
MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	575331-575361	0	1.0
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	661330-661360	0	1.0
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1599519-1599549	0	1.0
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	2441474-2441504	0	1.0
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	2441530-2441560	0	1.0
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	213838-213868	0	1.0
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2630586-2630616	0	1.0
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2630641-2630671	0	1.0
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	261459-261492	0	1.0
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1599574-1599604	1	0.968
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1823619-1823649	1	0.968
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	261454-261484	1	0.968
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	571190-571220	1	0.968
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1256729-1256759	1	0.968
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	213830-213863	1	0.971
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	571182-571215	1	0.971
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	2630578-2630611	1	0.971
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	2630633-2630666	1	0.971
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	NZ_CP013137.1	261336-261363	1	0.964
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	NZ_CP013137.1	1459931-1459958	1	0.964
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	661155-661185	2	0.935
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1134605-1134635	2	0.935
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1823445-1823475	2	0.935
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	1959727-1959757	2	0.935
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	2537700-2537730	2	0.935
NZ_CP013137_1	1.1\|305606\|31\|NZ_CP013137\|CRISPRCasFinder	305606-305636	31	NZ_CP013137.1	2796034-2796064	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	88167-88197	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	88225-88255	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	376417-376447	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	474241-474271	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	825620-825650	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1134719-1134749	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1134777-1134807	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1459879-1459909	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1470383-1470413	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1823500-1823530	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	1959672-1959702	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2260640-2260670	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2294308-2294338	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2340870-2340900	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2537758-2537788	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2537816-2537846	2	0.935
NZ_CP013137_1	1.2\|305663\|31\|NZ_CP013137\|CRISPRCasFinder	305663-305693	31	NZ_CP013137.1	2796089-2796119	2	0.935
NZ_CP013137_5	5.1\|1574213\|34\|NZ_CP013137\|CRISPRCasFinder	1574213-1574246	34	NZ_CP013137.1	825625-825658	2	0.941
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	NZ_CP013137.1	661162-661189	2	0.929

1. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 575331-575361, mismatch: 0, identity: 1.0

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
*******************************

2. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 661330-661360, mismatch: 0, identity: 1.0

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
*******************************

3. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1599519-1599549, mismatch: 0, identity: 1.0

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
*******************************

4. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 2441474-2441504, mismatch: 0, identity: 1.0

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
*******************************

5. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 2441530-2441560, mismatch: 0, identity: 1.0

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgccagcttc	Protospacer
*******************************

6. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 213838-213868, mismatch: 0, identity: 1.0

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtttgtagaatttcttttcgaaattctc	Protospacer
*******************************

7. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2630586-2630616, mismatch: 0, identity: 1.0

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtttgtagaatttcttttcgaaattctc	Protospacer
*******************************

8. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2630641-2630671, mismatch: 0, identity: 1.0

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtttgtagaatttcttttcgaaattctc	Protospacer
*******************************

9. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 261459-261492, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

10. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1599574-1599604, mismatch: 1, identity: 0.968

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttcggccagcttc	Protospacer
********************* *********

11. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1823619-1823649, mismatch: 1, identity: 0.968

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttccgtcagcttc	Protospacer
***********************.*******

12. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 261454-261484, mismatch: 1, identity: 0.968

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcttgtagaatttcttttcgaaattctc	Protospacer
****.**************************

13. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 571190-571220, mismatch: 1, identity: 0.968

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtttgtagaatttcttttcgaaattatc	Protospacer
**************************** **

14. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1256729-1256759, mismatch: 1, identity: 0.968

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttcttttcgaaattctc	Protospacer
*****.*************************

15. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 213830-213863, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctttgttgg	Protospacer
*************************** ******

16. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 571182-571215, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattatctgtgttgg	Protospacer
*********************** **********

17. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 2630578-2630611, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctttgttgg	Protospacer
*************************** ******

18. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 2630633-2630666, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctatgttgg	Protospacer
***************************.******

19. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to position: 261336-261363, mismatch: 1, identity: 0.964

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
acgaaaagtcagcttacgataatgtgca	Protospacer
********************** *****

20. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to position: 1459931-1459958, mismatch: 1, identity: 0.964

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
acgaaaagtcagcttacgataatgtgca	Protospacer
********************** *****

21. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 661155-661185, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgacttttcgtcagcttc	Protospacer
********************.**.*******

22. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1134605-1134635, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgacttttcgtcagcttc	Protospacer
********************.**.*******

23. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1823445-1823475, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttctgtcagcttc	Protospacer
*********************.*.*******

24. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 1959727-1959757, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctggctttccgtcagcttc	Protospacer
***************.*******.*******

25. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 2537700-2537730, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtaagctgactttacgtcagcttc	Protospacer
******************** **.*******

26. spacer 1.1|305606|31|NZ_CP013137|CRISPRCasFinder matches to position: 2796034-2796064, mismatch: 2, identity: 0.935

cattattgtaagctgactttccgccagcttc	CRISPR spacer
cattattgtatgctgactttccgacagcttc	Protospacer
********** ************ *******

27. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 88167-88197, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

28. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 88225-88255, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

29. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 376417-376447, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

30. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 474241-474271, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

31. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 825620-825650, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtttgtgggatttcttttcgaaattctc	Protospacer
*********.*.*******************

32. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1134719-1134749, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

33. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1134777-1134807, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

34. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1459879-1459909, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

35. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1470383-1470413, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttcctttcgaaattctc	Protospacer
*****.***********.*************

36. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1823500-1823530, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttctttttgaaattctc	Protospacer
*****.***************.*********

37. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 1959672-1959702, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttctttttgaaattctc	Protospacer
*****.***************.*********

38. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2260640-2260670, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

39. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2294308-2294338, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

40. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2340870-2340900, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttcatttcgaaattctc	Protospacer
*****.*********** *************

41. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2537758-2537788, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

42. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2537816-2537846, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgcctgtagaatttcttttcgaaattctc	Protospacer
****..*************************

43. spacer 1.2|305663|31|NZ_CP013137|CRISPRCasFinder matches to position: 2796089-2796119, mismatch: 2, identity: 0.935

attgtttgtagaatttcttttcgaaattctc	CRISPR spacer
attgtctgtagaatttcttttcgaaatcctc	Protospacer
*****.*********************.***

44. spacer 5.1|1574213|34|NZ_CP013137|CRISPRCasFinder matches to position: 825625-825658, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtgggatttcttttcgaaattctctgtgttgg	Protospacer
****.*.***************************

45. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to position: 661162-661189, mismatch: 2, identity: 0.929

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
acgaaaagtcagcttacaataatgtgca	Protospacer
*****************.**** *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	NC_021536	Synechococcus phage S-IOM18 genomic sequence	159754-159781	5	0.821
NZ_CP013137_2	2.1\|490549\|29\|NZ_CP013137\|CRISPRCasFinder	490549-490577	29	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	703321-703349	6	0.793
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	LN846932	Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome	10627-10654	6	0.786
NZ_CP013137_10	10.1\|2795982\|28\|NZ_CP013137\|CRISPRCasFinder	2795982-2796009	28	NZ_CP015319	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123a	9464-9491	7	0.75

1. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 5, identity: 0.821

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
acgaaaactcaccttacgataaaattta	Protospacer
******* *** ***********.* .*

2. spacer 2.1|490549|29|NZ_CP013137|CRISPRCasFinder matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 6, identity: 0.793

taaaagagggatacttgcgctgagcgcat	CRISPR spacer
gatcaaagggttccttgcgctgagcgcat	Protospacer
 *  *.**** * ****************

3. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 6, identity: 0.786

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
acgaaaaatcagattacgataaattagt	Protospacer
*******.**** ********** *.

4. spacer 10.1|2795982|28|NZ_CP013137|CRISPRCasFinder matches to NZ_CP015319 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123a) position: , mismatch: 7, identity: 0.75

acgaaaagtcagcttacgataaagtgca	CRISPR spacer
tcgaaatgtcagcttacgaaaaagcttt	Protospacer
 ***** ************ ****. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

192224 : 200044

Hokovirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000244415.1\|192224_193280_-	two-component system sensor histidine kinase SaeS	A0A1V0SGX0	Hokovirus	3.6e-14	29.8
WP_000149344.1\|193279_193966_-	response regulator transcription factor	NA	NA	NA	NA
WP_001037811.1\|193940_194414_-	DoxX family protein	NA	NA	NA	NA
WP_001093557.1\|194755_195196_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_000637683.1\|195475_196060_-	hypothetical protein	NA	NA	NA	NA
WP_001062968.1\|196158_196872_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000941334.1\|196875_197295_-	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_000446721.1\|197296_197965_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.1
WP_000604509.1\|198315_198909_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.5e-38	44.0
WP_001217797.1\|198892_200044_+	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	2.1e-23	36.1

DBSCAN-SWA_2

212016 : 226022

uncultured_Caudovirales_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000663031.1\|212016_213075_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.3e-21	26.4
WP_000197262.1\|213232_213775_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000429016.1\|214379_215297_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	2.1e-07	22.4
WP_000193751.1\|215578_217084_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_058007915.1\|217433_217922_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.2e-51	70.8
WP_001068497.1\|217941_218808_-	DMT family transporter	NA	NA	NA	NA
WP_000692523.1\|219608_220007_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	4.3e-53	72.7
WP_000855505.1\|219969_222075_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000562498.1\|222192_223164_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
WP_001807150.1\|223298_224618_+\|transposase	ISL3-like element IS1181 family transposase	NA	NA	NA	NA
WP_000499194.1\|224859_225015_+	hypothetical protein	NA	NA	NA	NA
WP_001807234.1\|225053_226022_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	9.5e-139	79.4

DBSCAN-SWA_3

408066 : 455715

Streptococcus_phage(20.0%)

bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000896694.1\|408066_408873_-\|protease	protease adaptor protein YjbH	NA	NA	NA	NA
WP_000214067.1\|408895_409261_-	truncated hemoglobin	NA	NA	NA	NA
WP_000224616.1\|409364_409958_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_001242107.1\|410143_410491_+	hypothetical protein	NA	NA	NA	NA
WP_001077683.1\|410507_411143_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_001270834.1\|411159_411969_+	NAD kinase	NA	NA	NA	NA
WP_031927829.1\|411965_412820_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_000062408.1\|412840_414226_+	magnesium transporter	NA	NA	NA	NA
WP_000395153.1\|414235_416080_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_000933195.1\|416357_417128_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_000933105.1\|417323_418409_-	AI-2E family transporter	NA	NA	NA	NA
WP_000570704.1\|418750_420319_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_000889177.1\|420461_421220_+	esterase family protein	NA	NA	NA	NA
WP_000600387.1\|421413_421923_+	YjcG family protein	NA	NA	NA	NA
WP_001154217.1\|422035_423226_-	MFS transporter	NA	NA	NA	NA
WP_000258650.1\|423203_424379_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA
WP_000340127.1\|424811_426296_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_001798480.1\|426276_426537_+	YueH family protein	NA	NA	NA	NA
WP_001049957.1\|426536_428099_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	2.2e-36	28.2
WP_000928413.1\|428400_429204_+	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_072357901.1\|429422_431747_+\|protease	serine protease	W5SAB9	Pithovirus	2.1e-11	27.4
WP_000021872.1\|431763_433122_+	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_000414179.1\|433260_434772_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_000876826.1\|436038_436257_+	IDEAL domain-containing protein	NA	NA	NA	NA
WP_000668813.1\|436337_437324_-	lipoate--protein ligase	NA	NA	NA	NA
WP_000214898.1\|437522_437699_+	YkvS family protein	NA	NA	NA	NA
WP_001033867.1\|437713_438316_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_029693138.1\|439341_439608_+\|bacteriocin	bacteriocin transporter	NA	NA	NA	NA
WP_000870824.1\|439651_441616_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000668628.1\|441618_441939_+	YxeA family protein	NA	NA	NA	NA
WP_000571186.1\|441935_442577_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-19	33.7
WP_072357895.1\|442664_442955_-	hypothetical protein	NA	NA	NA	NA
WP_000415394.1\|443296_443584_+	hypothetical protein	NA	NA	NA	NA
WP_000719188.1\|443589_445071_+	glycosyltransferase	NA	NA	NA	NA
WP_000766009.1\|445159_445516_-	DoxX family protein	NA	NA	NA	NA
WP_058007957.1\|446002_446962_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_020978112.1\|447007_447139_-	hypothetical protein	NA	NA	NA	NA
WP_000867357.1\|447202_447418_-	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	1.5e-07	49.1
WP_000620941.1\|447582_448134_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000070966.1\|448184_449123_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000190613.1\|449304_450666_+	isochorismate synthase MenF	NA	NA	NA	NA
WP_000526687.1\|450652_452326_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_000150207.1\|452312_453116_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_000184945.1\|453108_453930_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_000284457.1\|454166_454496_-	staphostatin B	NA	NA	NA	NA
WP_042908123.1\|454533_455715_-\|protease	cysteine protease staphopain B	NA	NA	NA	NA

DBSCAN-SWA_4

475746 : 484219

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001807178.1\|475746_476229_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.4e-20	43.3
WP_001010403.1\|476215_477340_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000174052.1\|477343_478048_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	2.8e-47	42.1
WP_000848351.1\|478047_478311_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666799.1\|478312_478984_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_000032747.1\|478976_481166_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.8e-140	39.7
WP_000483713.1\|481144_482629_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
WP_000030808.1\|482621_483650_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.8e-61	41.4
WP_031927753.1\|483652_484219_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.0e-29	40.1

DBSCAN-SWA_5

722324 : 769179

Staphylococcus_phage(24.14%)

integrase,portal,capsid,protease,tRNA,transposase,terminase

attL 737447:737506|attR 747988:749500

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001001521.1\|722324_723869_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_000282386.1\|723869_724235_+	YlbF family regulator	NA	NA	NA	NA
WP_000842277.1\|724261_724753_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_000073332.1\|725055_727674_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	5.0e-41	23.7
WP_000516257.1\|727686_729696_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.3e-59	29.5
WP_001077635.1\|729701_730244_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_001103747.1\|730718_731537_+	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	3.1e-26	35.1
WP_000417379.1\|731665_733162_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_001218598.1\|733319_734993_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_000136955.1\|735142_736057_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001798536.1\|736074_737010_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_000561359.1\|737024_737258_+	RNA chaperone Hfq	NA	NA	NA	NA
737447:737506	attL	NA	NA	NA	NA
WP_001807150.1\|737519_738839_-\|transposase	ISL3-like element IS1181 family transposase	NA	NA	NA	NA
WP_000448078.1\|739000_739477_-	glutathione peroxidase	Q70H87	Fowlpox_virus	1.2e-22	38.0
WP_031927515.1\|739588_740827_+	GTPase HflX	NA	NA	NA	NA
WP_000652044.1\|740845_742084_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000624945.1\|742326_742695_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001126603.1\|742713_744054_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_058008001.1\|744193_745321_-\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	1.1e-32	31.2
WP_001183751.1\|745373_746069_-	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	1.8e-06	42.1
WP_000554410.1\|746080_746464_-	hypothetical protein	NA	NA	NA	NA
WP_001807150.1\|746654_747974_+\|transposase	ISL3-like element IS1181 family transposase	NA	NA	NA	NA
WP_000664916.1\|748130_748523_-	helix-turn-helix domain-containing protein	A0A2I6PE55	Staphylococcus_phage	2.7e-28	53.6
WP_001209962.1\|748690_748909_+	DUF739 family protein	A0A2I6PE94	Staphylococcus_phage	4.9e-19	62.5
WP_058008002.1\|748935_749211_+	hypothetical protein	NA	NA	NA	NA
WP_000662665.1\|749475_749646_+	hypothetical protein	Q4ZDZ8	Staphylococcus_virus	1.8e-21	89.3
747988:749500	attR	NA	NA	NA	NA
WP_000800340.1\|749634_749841_-	hypothetical protein	A1BTY8	Staphylococcus_virus	4.3e-25	75.0
WP_001157026.1\|749900_750584_+	phage repressor protein	A9CR56	Staphylococcus_phage	8.0e-108	86.0
WP_000072840.1\|750682_750844_+	DUF1270 family protein	R4IH12	Staphylococcus_phage	1.1e-12	69.8
WP_042908107.1\|750931_751207_+	DUF2482 family protein	W5RAK4	Staphylococcus_phage	7.0e-39	92.2
WP_000786635.1\|751237_751504_+	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	3.9e-18	53.6
WP_001002734.1\|751508_752759_+	helicase SNF2	A0A1B1P7L4	Bacillus_phage	1.8e-134	57.8
WP_025174483.1\|752749_753067_+	hypothetical protein	A0A2P0ZLA7	Lactobacillus_phage	7.1e-19	43.2
WP_000160835.1\|753059_753365_+	hypothetical protein	A0A1B1P7M6	Bacillus_phage	5.8e-26	59.3
WP_031927619.1\|753354_755181_+	AAA family ATPase	A0A1B1P7N0	Bacillus_phage	2.6e-166	56.3
WP_001250666.1\|755198_755405_+	hypothetical protein	NA	NA	NA	NA
WP_000140895.1\|755450_755933_+	DUF669 domain-containing protein	A0A2H4J1S8	uncultured_Caudovirales_phage	2.9e-19	37.3
WP_000394569.1\|758240_758630_+	hypothetical protein	U3PG42	Staphylococcus_phage	4.5e-07	51.9
WP_000792984.1\|758705_759011_+	MazG-like family protein	A0A2H4JF73	uncultured_Caudovirales_phage	6.2e-36	73.7
WP_000231299.1\|759033_759504_-	hypothetical protein	NA	NA	NA	NA
WP_000584491.1\|759924_760116_+	hypothetical protein	NA	NA	NA	NA
WP_000276481.1\|760147_762022_+	DNA primase family protein	A0A1B1P7L5	Bacillus_phage	1.1e-210	57.6
WP_000933402.1\|762326_762818_+	hypothetical protein	S5MAA9	Brevibacillus_phage	7.4e-07	30.0
WP_000870118.1\|763249_763540_+	HNH endonuclease	D2XR61	Bacillus_phage	1.3e-19	43.2
WP_000868798.1\|763858_764191_+	hypothetical protein	NA	NA	NA	NA
WP_058008006.1\|764174_765818_+\|terminase	terminase large subunit	A0A0U4B089	Bacillus_phage	7.1e-179	57.1
WP_000523761.1\|765833_766970_+\|portal	phage portal protein	A0A2H4JBZ5	uncultured_Caudovirales_phage	7.8e-84	41.4
WP_000394245.1\|766969_767656_+\|protease	Clp protease ClpP	A0A2H4J8Y7	uncultured_Caudovirales_phage	1.4e-43	49.5
WP_058008008.1\|767682_768852_+\|capsid	phage major capsid protein	A0A0U4JIF4	Bacillus_phage	9.8e-98	50.3
WP_000406284.1\|768873_769179_+	hypothetical protein	A0A059T7R0	Listeria_phage	6.0e-15	44.8

DBSCAN-SWA_6

780022 : 786469

Staphylococcus_phage(83.33%)

capsid,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569801.1\|780022_780433_+	hypothetical protein	A0A1I9KKA6	Lactobacillus_phage	3.9e-09	32.8
WP_000665466.1\|780467_780782_+	hypothetical protein	NA	NA	NA	NA
WP_000435147.1\|780765_781149_+\|holin	phage holin family protein	H9A0W5	Staphylococcus_phage	3.3e-18	40.0
WP_058008014.1\|781213_782134_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JQL2	Staphylococcus_phage	2.0e-66	50.2
WP_001793526.1\|782611_782809_+	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	9.9e-11	50.0
WP_001019311.1\|783002_783506_+	hypothetical protein	NA	NA	NA	NA
WP_000459699.1\|783518_783833_+	hypothetical protein	NA	NA	NA	NA
WP_000907423.1\|783832_784261_+	protein-export chaperone SecB	NA	NA	NA	NA
WP_000997672.1\|784664_784874_+	helix-turn-helix domain-containing protein	A0A1W6JNK0	Staphylococcus_phage	1.9e-12	59.4
WP_052724874.1\|785128_786469_+\|capsid	minor capsid protein	A0A1J0MFV1	Staphylococcus_phage	7.0e-140	58.7

DBSCAN-SWA_7

962931 : 1045400

Staphylococcus_phage(80.28%)

integrase,tail,portal,capsid,protease,holin,tRNA,transposase,head,terminase

attL 973133:973150|attR 1047169:1047186

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000858797.1\|962931_964224_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.5e-54	30.0
WP_000525073.1\|964546_967240_-	ATP-dependent DNA helicase DinG	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000049912.1\|967263_968235_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_058008040.1\|968221_969424_-\|tRNA	CCA tRNA nucleotidyltransferase	G3MAR3	Bacillus_virus	3.4e-29	27.9
WP_058008041.1\|969428_970571_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA
WP_000839926.1\|970814_971132_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_001827022.1\|971467_972148_-	zinc metallopeptidase	NA	NA	NA	NA
WP_000154688.1\|972219_972807_-	DUF1405 domain-containing protein	NA	NA	NA	NA
WP_000005212.1\|972796_973372_-	YpiB family protein	G3MAV7	Bacillus_virus	2.1e-08	27.2
973133:973150	attL	NA	NA	NA	NA
WP_000389525.1\|973385_974630_-	hypothetical protein	NA	NA	NA	NA
WP_000245910.1\|974636_975935_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000776332.1\|975944_977009_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_001269935.1\|977034_978201_-	chorismate synthase	A0A291AU41	Pandoravirus	2.0e-34	32.3
WP_001807150.1\|978626_979946_+\|transposase	ISL3-like element IS1181 family transposase	NA	NA	NA	NA
WP_058008043.1\|980189_980639_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_001096479.1\|980730_981690_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	1.3e-10	24.4
WP_000774684.1\|981691_982417_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_058008044.1\|982419_982992_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_001043863.1\|983422_983695_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	4.2e-28	73.3
WP_058008046.1\|983865_984864_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_058008048.1\|986413_987589_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_031844926.1\|988154_988259_-	hypothetical protein	NA	NA	NA	NA
WP_000644392.1\|988301_988961_-	(d)CMP kinase	NA	NA	NA	NA
WP_029549671.1\|989037_990006_+	asparaginase	NA	NA	NA	NA
WP_001174260.1\|990120_991107_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA
WP_031927468.1\|991300_991384_-	hypothetical protein	NA	NA	NA	NA
WP_000069302.1\|991508_992792_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_000902112.1\|992944_994324_-	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.8e-56	33.6
WP_058008050.1\|994313_995267_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001151998.1\|995374_995623_+	ferredoxin	A0A127AYY7	Bacillus_phage	1.9e-14	46.7
WP_001186910.1\|995728_996274_-	ECF transporter S component	NA	NA	NA	NA
WP_001033755.1\|997868_998015_-	hypothetical protein	NA	NA	NA	NA
WP_031927470.1\|998007_998934_-	DUF1672 domain-containing protein	NA	NA	NA	NA
WP_058008054.1\|999292_1000312_-	Panton-Valentine bi-component leukocidin subunit F	A0A2I6PEU3	Staphylococcus_phage	1.7e-183	100.0
WP_000239544.1\|1000307_1001246_-	Panton-Valentine bi-component leukocidin subunit S	A0A2I6PF61	Staphylococcus_phage	1.7e-180	100.0
WP_000909207.1\|1001635_1003090_-	N-acetylmuramoyl-L-alanine amidase	M1TB12	Staphylococcus_phage	3.4e-289	100.0
WP_000339141.1\|1003100_1003403_-\|holin	phage holin	A0A2I6PF56	Staphylococcus_phage	3.1e-48	100.0
WP_031887865.1\|1003538_1003838_-	DUF2951 family protein	A0A2I6PER2	Staphylococcus_phage	5.9e-31	99.0
WP_000916020.1\|1003883_1004048_-	XkdX family protein	A0A2I6PES4	Staphylococcus_phage	4.9e-24	100.0
WP_001166599.1\|1004040_1004430_-	DUF2977 domain-containing protein	A0A2I6PER1	Staphylococcus_phage	2.2e-62	100.0
WP_000179860.1\|1007819_1008110_-	hypothetical protein	A0A2I6PF46	Staphylococcus_phage	2.1e-49	100.0
WP_000384462.1\|1008109_1009693_-\|tail	phage tail protein	Q8SDP1	Staphylococcus_virus	7.1e-309	100.0
WP_001190533.1\|1009701_1010526_-\|tail	phage tail family protein	A0A2I6PER3	Staphylococcus_phage	4.1e-159	100.0
WP_058008056.1\|1010525_1016726_-\|tail	phage tail tape measure protein	A0A2I6PF36	Staphylococcus_phage	0.0e+00	99.7
WP_000438833.1\|1016739_1016898_-	hypothetical protein	A0A2I6PES8	Staphylococcus_phage	1.2e-19	100.0
WP_000589166.1\|1016948_1017290_-	hypothetical protein	A0A2I6PEQ2	Staphylococcus_phage	1.5e-54	100.0
WP_000169128.1\|1017347_1017803_-	Ig domain-containing protein	A0A2I6PF45	Staphylococcus_phage	1.3e-77	100.0
WP_000807536.1\|1017894_1018536_-\|tail	tail protein	A0A2I6PEP6	Staphylococcus_phage	5.9e-121	100.0
WP_001023806.1\|1018570_1018966_-	DUF3168 domain-containing protein	A0A2I6PEQ4	Staphylococcus_phage	8.8e-67	100.0
WP_000110023.1\|1018966_1019368_-	hypothetical protein	A0A2I6PF54	Staphylococcus_phage	8.1e-68	100.0
WP_000395498.1\|1019364_1019697_-	hypothetical protein	A0A2I6PES3	Staphylococcus_phage	4.1e-57	100.0
WP_000050973.1\|1019708_1019987_-\|head,tail	phage gp6-like head-tail connector protein	A0A2I6PEQ1	Staphylococcus_phage	2.1e-46	100.0
WP_001142734.1\|1020055_1021219_-\|capsid	phage major capsid protein	A0A2I6PEQ3	Staphylococcus_phage	1.2e-217	100.0
WP_058008059.1\|1021230_1022004_-\|protease	Clp protease ClpP	A0A2I6PEQ7	Staphylococcus_phage	1.2e-136	99.6
WP_001100665.1\|1021987_1023226_-\|portal	phage portal protein	A0A2I6PF26	Staphylococcus_phage	1.2e-234	100.0
WP_000778933.1\|1024910_1025216_-\|terminase	P27 family phage terminase small subunit	A0A2I6PEQ6	Staphylococcus_phage	2.9e-49	100.0
WP_000160693.1\|1025343_1025658_-	HNH endonuclease	A0A2I6PF37	Staphylococcus_phage	2.5e-56	100.0
WP_000528512.1\|1025814_1026252_-	transcriptional regulator	A0A2I6PEN3	Staphylococcus_phage	7.9e-77	100.0
WP_001793488.1\|1026264_1027632_-	DEAD/DEAH box helicase	A0A2I6PE95	Staphylococcus_phage	1.7e-263	100.0
WP_000665203.1\|1027612_1027903_-	VRR-NUC domain-containing protein	A0A2I6PEN7	Staphylococcus_phage	6.5e-51	100.0
WP_072357819.1\|1028036_1028141_+	hypothetical protein	A0A2I6PDP6	Staphylococcus_phage	8.0e-12	97.1
WP_058008061.1\|1028243_1030691_-	virulence-associated E family protein	Q4ZCN2	Staphylococcus_virus	0.0e+00	99.3
WP_000265258.1\|1030742_1030943_-	DUF1514 family protein	A0A2I6PF41	Staphylococcus_phage	2.9e-26	100.0
WP_000237866.1\|1031010_1031163_-	transcriptional activator RinB	A0A2I6PF16	Staphylococcus_phage	5.8e-19	98.0
WP_001125015.1\|1031165_1031366_-	hypothetical protein	A0A2I6PF22	Staphylococcus_phage	1.8e-28	100.0
WP_058008063.1\|1031340_1031529_-	DUF1381 domain-containing protein	A0A2I6PF34	Staphylococcus_phage	2.0e-24	96.8
WP_033858013.1\|1031545_1031719_-	hypothetical protein	A0A1W6JQ45	Staphylococcus_phage	6.2e-25	98.2
WP_000700108.1\|1032274_1032517_-	hypothetical protein	A0A2I6PF40	Staphylococcus_phage	3.7e-36	100.0
WP_000370296.1\|1032506_1032743_-	DUF1024 family protein	A0A2I6PF11	Staphylococcus_phage	4.0e-35	100.0
WP_001813803.1\|1032735_1032903_-	hypothetical protein	A0A2I6PF20	Staphylococcus_phage	3.5e-25	100.0
WP_000178883.1\|1032914_1033163_-	hypothetical protein	A0A2I6PF06	Staphylococcus_phage	3.6e-42	100.0
WP_000235381.1\|1033171_1033372_-	hypothetical protein	A0A2I6PF32	Staphylococcus_phage	1.3e-29	100.0
WP_000111488.1\|1033374_1033632_-	DUF3310 domain-containing protein	A0A2I6PF10	Staphylococcus_phage	5.7e-43	100.0
WP_000113977.1\|1033631_1034033_-	PVL family protein	A7TWG8	Staphylococcus_phage	9.5e-69	100.0
WP_001164629.1\|1034032_1034218_-	DUF3113 family protein	A0A2I6PEM8	Staphylococcus_phage	7.0e-27	100.0
WP_072357865.1\|1034230_1036183_-	DNA polymerase	A0A2I6PF18	Staphylococcus_phage	0.0e+00	99.4
WP_058008067.1\|1036251_1036809_-	DUF2815 family protein	A0A2I6PF05	Staphylococcus_phage	6.7e-97	99.5
WP_058008068.1\|1036834_1038001_-	DUF2800 domain-containing protein	A7TWG4	Staphylococcus_phage	2.7e-217	98.7
WP_000985984.1\|1037997_1038360_-	hypothetical protein	Q4ZCP8	Staphylococcus_virus	1.4e-55	99.2
WP_031773431.1\|1038374_1038698_-	hypothetical protein	A0A2I6PF12	Staphylococcus_phage	2.2e-52	99.1
WP_001285955.1\|1038776_1038938_-	DUF1270 family protein	O80077	Staphylococcus_phage	6.6e-21	100.0
WP_001124160.1\|1038950_1039214_-	helix-turn-helix domain-containing protein	A7TWG0	Staphylococcus_phage	5.7e-46	100.0
WP_001097552.1\|1039238_1039454_-	hypothetical protein	A0A2I6PF01	Staphylococcus_phage	1.9e-31	100.0
WP_001128433.1\|1039508_1039874_+	hypothetical protein	A0A2I6PF07	Staphylococcus_phage	2.4e-63	100.0
WP_001025401.1\|1039842_1040088_-	DUF2829 domain-containing protein	A0A2I6PF15	Staphylococcus_phage	5.1e-41	100.0
WP_000642492.1\|1040143_1040353_+	hypothetical protein	W5R9J5	Staphylococcus_phage	1.2e-30	100.0
WP_000939498.1\|1040342_1040486_-	hypothetical protein	W5R8I6	Staphylococcus_phage	2.5e-16	100.0
WP_001148544.1\|1040514_1041291_-	Rha family transcriptional regulator	A0A2I6PD87	Staphylococcus_phage	1.1e-140	100.0
WP_001121027.1\|1041304_1041541_-	helix-turn-helix transcriptional regulator	A0A2I6PD81	Staphylococcus_phage	1.5e-37	100.0
WP_058008071.1\|1041692_1042007_+	helix-turn-helix transcriptional regulator	A0A0N9BAW4	Staphylococcus_phage	2.2e-52	99.0
WP_000525004.1\|1042019_1042481_+	hypothetical protein	A0A2K9VBR7	Staphylococcus_phage	1.2e-83	100.0
WP_000825948.1\|1042498_1043083_+	hypothetical protein	A0A2I6PD77	Staphylococcus_phage	1.4e-68	100.0
WP_001013104.1\|1043312_1043459_+	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
WP_000264748.1\|1044194_1045400_+\|integrase	site-specific integrase	Q8SDS6	Staphylococcus_virus	5.9e-223	100.0
1047169:1047186	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1106223 : 1114535

Staphylococcus_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001213908.1\|1106223_1107009_-	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-19	28.3
WP_000924216.1\|1107134_1108025_-	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.0e-26	33.1
WP_001062177.1\|1108034_1109381_-	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	2.4e-55	34.0
WP_000683926.1\|1109494_1110595_-	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	2.3e-08	30.6
WP_058008082.1\|1110597_1111275_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_001283055.1\|1111405_1112512_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_001217266.1\|1112735_1114535_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.3e-53	36.3

DBSCAN-SWA_9

1307285 : 1373978

Staphylococcus_phage(93.33%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001266157.1\|1307285_1307930_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_000434769.1\|1307944_1308736_-	phosphotransferase family protein	NA	NA	NA	NA
WP_000411088.1\|1309286_1310135_-	D-amino-acid transaminase	NA	NA	NA	NA
WP_031927453.1\|1310138_1311548_-	Mn(2+)-dependent dipeptidase Sapep	NA	NA	NA	NA
WP_001051855.1\|1312046_1312469_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_001217117.1\|1312485_1313181_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000004344.1\|1313177_1314839_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_031927455.1\|1315245_1316514_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	2.0e-56	99.1
WP_058008115.1\|1316630_1323170_-	LPXTG-anchored repetitive surface protein SasC	A0A2H4PQU6	Staphylococcus_phage	3.3e-291	92.5
WP_000836469.1\|1323495_1323807_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.5e-50	96.1
WP_141767132.1\|1323828_1326246_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.2
WP_001025061.1\|1326533_1327715_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.6e-218	100.0
WP_000526539.1\|1327824_1328778_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
WP_000764419.1\|1328774_1329338_+	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
WP_000757543.1\|1329457_1329859_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000266089.1\|1330430_1331258_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_072357767.1\|1331260_1331380_-	hypothetical protein	NA	NA	NA	NA
WP_001196354.1\|1331491_1332493_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7
WP_001008551.1\|1332614_1333079_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
WP_001159035.1\|1333091_1334273_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.7e-227	100.0
WP_000493884.1\|1334283_1334916_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-111	98.6
WP_000077341.1\|1334922_1335966_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	9.1e-196	98.8
WP_001261666.1\|1336446_1337949_-	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	8.6e-30	98.6
WP_000221188.1\|1338469_1338784_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	2.8e-52	97.1
WP_000989112.1\|1338783_1340076_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	8.8e-225	97.7
WP_000163240.1\|1340093_1340489_+	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	2.4e-72	99.2
WP_001032833.1\|1340838_1341693_-	glucosaminidase domain-containing protein	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000384171.1\|1341968_1342193_-	hypothetical protein	NA	NA	NA	NA
WP_000671048.1\|1342391_1342862_+	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	4.8e-80	96.8
WP_001153740.1\|1342974_1343418_+	competence protein ComK	NA	NA	NA	NA
WP_001030469.1\|1343404_1343848_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-57	98.6
WP_001168909.1\|1344145_1344781_+\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001096494.1\|1345217_1345931_-	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_000091445.1\|1346188_1346491_+	hypothetical protein	NA	NA	NA	NA
WP_001200550.1\|1346746_1347112_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	6.2e-59	98.3
WP_000623473.1\|1347108_1347462_+	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	4.2e-20	77.8
WP_058008119.1\|1347711_1348545_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	3.5e-158	99.3
WP_000366163.1\|1348756_1349665_-	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
WP_000933822.1\|1349789_1350983_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
WP_000109907.1\|1351354_1352947_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	99.8
WP_072357842.1\|1353241_1353988_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	1.3e-140	97.6
WP_000672018.1\|1353992_1354466_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	1.0e-82	97.5
WP_000718107.1\|1354531_1354789_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000778513.1\|1354785_1355787_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	8.2e-186	97.3
WP_000348367.1\|1355791_1357270_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.9e-282	96.7
WP_072357839.1\|1357428_1357884_-	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	1.4e-79	98.6
WP_072357764.1\|1358186_1358837_+	excalibur calcium-binding domain-containing protein	A0A2H4PQM8	Staphylococcus_phage	9.5e-34	67.6
WP_000070657.1\|1358918_1359914_+	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	2.9e-74	96.8
WP_000669043.1\|1359988_1360615_+	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	2.8e-75	93.0
WP_000627546.1\|1360655_1360997_+	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	3.0e-55	94.7
WP_000414223.1\|1361097_1361670_+	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	7.1e-25	93.1
WP_000864137.1\|1361867_1362425_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	2.0e-77	96.2
WP_058008370.1\|1362610_1363051_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_103225775.1\|1363058_1364625_+\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.7e-49	51.8
WP_000742593.1\|1365038_1365488_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_058008121.1\|1366123_1367314_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	8.9e-46	34.7
WP_001038741.1\|1369226_1369946_-\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	4.0e-126	95.8
WP_001038864.1\|1370071_1370791_-\|protease	serine protease	A0A2H4PQP7	Staphylococcus_phage	2.4e-123	92.9
WP_001039451.1\|1370848_1371571_-\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	8.1e-127	95.8
WP_031927812.1\|1371695_1372403_-\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	1.7e-124	95.7
WP_058008123.1\|1373357_1373978_+	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	2.4e-63	67.5

DBSCAN-SWA_10

1486740 : 1569547

107

Staphylococcus_phage(89.33%)

integrase,tail,portal,capsid,protease,holin,head,terminase

attL 1527628:1527645|attR 1582341:1582358

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000827765.1\|1486740_1487907_+\|protease	cysteine protease staphopain A	NA	NA	NA	NA
WP_000434533.1\|1487937_1488264_+	staphostatin A	NA	NA	NA	NA
WP_000669861.1\|1488554_1488728_-	NETI motif-containing protein	NA	NA	NA	NA
WP_000011539.1\|1488708_1489311_-	DUF2179 domain-containing protein	NA	NA	NA	NA
WP_058008148.1\|1489579_1490401_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	7.9e-70	53.1
WP_000284433.1\|1490393_1491863_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	3.5e-108	45.1
WP_058008150.1\|1492046_1493123_+	nitric oxide synthase oxygenase	NA	NA	NA	NA
WP_001177828.1\|1493142_1493937_+	prephenate dehydratase	NA	NA	NA	NA
WP_001802312.1\|1494008_1494116_+	hypothetical protein	NA	NA	NA	NA
WP_000323164.1\|1494126_1495689_-	SLC13 family permease	NA	NA	NA	NA
WP_000275712.1\|1495893_1496991_-	pectate lyase	U5PWM6	Bacillus_phage	1.5e-47	34.6
WP_000149686.1\|1497362_1497923_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_001140871.1\|1497975_1498905_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_001790680.1\|1499097_1499271_-	hypothetical protein	NA	NA	NA	NA
WP_042908133.1\|1499322_1500702_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_000181312.1\|1500821_1501850_-	lactonase family protein	NA	NA	NA	NA
WP_001284658.1\|1502309_1502690_-	penicillinase repressor BlaI	NA	NA	NA	NA
WP_001096369.1\|1502679_1504437_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA
WP_000612780.1\|1505703_1506114_+	YolD-like family protein	U3PG23	Staphylococcus_phage	1.4e-30	54.2
WP_000514485.1\|1506142_1506508_-	hypothetical protein	NA	NA	NA	NA
WP_058008153.1\|1506516_1508580_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000706211.1\|1508582_1509695_-\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	8.7e-11	31.0
WP_000267034.1\|1510240_1510414_-	hypothetical protein	NA	NA	NA	NA
WP_001188066.1\|1510864_1511905_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_000713075.1\|1511961_1512804_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_001033968.1\|1512800_1513358_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_000966288.1\|1513417_1513942_-	membrane protein	NA	NA	NA	NA
WP_000182842.1\|1514062_1514626_+	thioredoxin family protein	NA	NA	NA	NA
WP_001221656.1\|1514691_1515432_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
WP_000763047.1\|1515431_1516304_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_000645730.1\|1516300_1516981_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000991298.1\|1516981_1517878_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000691584.1\|1517874_1518255_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000681972.1\|1518512_1518689_-	hypothetical protein	NA	NA	NA	NA
WP_000990056.1\|1518931_1519030_-	hypothetical protein	NA	NA	NA	NA
WP_001068524.1\|1519229_1520516_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_058008155.1\|1520786_1521077_-	MAP domain-containing protein	NA	NA	NA	NA
WP_031927804.1\|1521087_1522527_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA
WP_000669791.1\|1523484_1523664_+	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	1.4e-24	98.3
WP_001791826.1\|1523974_1524235_+	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000702263.1\|1524286_1524637_-	complement inhibitor SCIN-A	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
WP_000920038.1\|1526131_1526623_-	staphylokinase	A0A1W6JQ12	Staphylococcus_phage	4.7e-86	99.4
WP_000861038.1\|1526813_1527569_-	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000611512.1\|1527580_1527835_-\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
1527628:1527645	attL	NA	NA	NA	NA
WP_031762631.1\|1527886_1527994_+	hypothetical protein	NA	NA	NA	NA
WP_078157113.1\|1528036_1528222_-\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.0e-21	96.5
WP_000340977.1\|1528364_1528739_-	hypothetical protein	G4KNR3	Staphylococcus_phage	3.3e-39	100.0
WP_001040255.1\|1528794_1529082_-	hypothetical protein	A0A075LZJ6	Staphylococcus_phage	5.8e-44	100.0
WP_000654329.1\|1529128_1529281_-	hypothetical protein	D2JLG0	Staphylococcus_phage	1.2e-19	98.0
WP_031927805.1\|1529270_1533056_-	phage minor structural protein	D2JLF9	Staphylococcus_phage	0.0e+00	99.4
WP_058008156.1\|1533071_1534562_-\|tail	phage tail family protein	D2JLF8	Staphylococcus_phage	9.0e-298	99.6
WP_042908137.1\|1534561_1539211_-\|tail	phage tail tape measure protein	A0A1V0E5H1	Staphylococcus_phage	0.0e+00	98.2
WP_000570353.1\|1539266_1539389_-	hypothetical protein	D2JLF6	Staphylococcus_phage	6.9e-15	100.0
WP_058008158.1\|1539448_1539895_-	hypothetical protein	O80053	Staphylococcus_phage	4.2e-73	95.9
WP_000570652.1\|1539959_1540913_-	Ig-like domain-containing protein	A7TWD0	Staphylococcus_phage	6.2e-175	100.0
WP_000611452.1\|1540913_1541294_-	hypothetical protein	D2JLF3	Staphylococcus_phage	5.8e-68	100.0
WP_000501244.1\|1541290_1541668_-	HK97 gp10 family phage protein	D2JLF2	Staphylococcus_phage	1.1e-61	100.0
WP_000975314.1\|1541667_1542003_-\|head,tail	head-tail adaptor protein	A7TWC7	Staphylococcus_phage	1.1e-59	100.0
WP_001177483.1\|1541989_1542322_-\|head,tail	phage head-tail connector protein	D2JLF0	Staphylococcus_phage	2.1e-58	100.0
WP_001252099.1\|1542330_1542489_-	hypothetical protein	D2JLE9	Staphylococcus_phage	3.2e-20	100.0
WP_000849950.1\|1542524_1543772_-\|capsid	phage major capsid protein	A7TWC4	Staphylococcus_phage	5.0e-209	100.0
WP_000032525.1\|1543859_1544444_-\|head,protease	HK97 family phage prohead protease	D2JLE7	Staphylococcus_phage	9.8e-107	100.0
WP_000511067.1\|1544436_1545687_-\|portal	phage portal protein	D2JLE6	Staphylococcus_phage	4.4e-237	100.0
WP_000133304.1\|1545906_1547601_-\|terminase	phage terminase large subunit	D2JLE4	Staphylococcus_phage	0.0e+00	100.0
WP_000919026.1\|1547603_1548071_-\|terminase	phage terminase small subunit P27 family	D2JLE3	Staphylococcus_phage	1.1e-81	100.0
WP_000817289.1\|1548200_1548545_-	HNH endonuclease	D2JLE2	Staphylococcus_phage	4.2e-65	100.0
WP_000406191.1\|1548560_1549013_-	nucleoside triphosphate pyrophosphohydrolase family protein	D2JLE1	Staphylococcus_phage	1.4e-79	100.0
WP_000282745.1\|1549127_1549589_-	hypothetical protein	A7TWB6	Staphylococcus_phage	1.6e-72	100.0
WP_047213617.1\|1549611_1549812_-	DUF1514 family protein	A0A2I6PDV9	Staphylococcus_phage	3.1e-28	98.5
WP_000595240.1\|1549811_1549961_-	hypothetical protein	A0A1W6JPZ2	Staphylococcus_phage	4.1e-17	98.0
WP_000573772.1\|1549953_1550154_-	hypothetical protein	NA	NA	NA	NA
WP_058008160.1\|1550150_1550357_-	DUF1381 domain-containing protein	A0A2I6PDB6	Staphylococcus_phage	2.4e-23	80.9
WP_057520733.1\|1550353_1550599_-	hypothetical protein	A0A0H4ITX2	Staphylococcus_phage	3.2e-35	97.5
WP_000185680.1\|1550635_1551172_-	dUTP diphosphatase	A0A1P8L6E0	Staphylococcus_phage	2.1e-95	100.0
WP_000714406.1\|1551164_1551335_-	hypothetical protein	A0A1W6JQ22	Staphylococcus_phage	9.7e-23	98.2
WP_001065063.1\|1551321_1551576_-	DUF1024 family protein	B5WZN0	Staphylococcus_phage	3.8e-39	100.0
WP_058008163.1\|1551568_1551832_-	hypothetical protein	A0A2I6PDB3	Staphylococcus_phage	2.4e-36	89.7
WP_031927916.1\|1551828_1552230_-	hypothetical protein	A0A0H4IPW3	Staphylococcus_phage	2.1e-55	79.9
WP_000131379.1\|1552244_1552487_-	hypothetical protein	A0A0F6N3E1	Staphylococcus_phage	1.9e-40	98.8
WP_047213626.1\|1552490_1552859_-	phage protein	I1W656	Staphylococcus_phage	3.1e-50	99.2
WP_001662398.1\|1552871_1553276_-	RusA family crossover junction endodeoxyribonuclease	O80087	Staphylococcus_phage	8.4e-73	100.0
WP_000338528.1\|1553284_1553503_-	hypothetical protein	A0A1P8L6E4	Staphylococcus_phage	1.4e-37	100.0
WP_058008165.1\|1553509_1554427_-	DnaD domain protein	S4V6D4	Staphylococcus_phage	4.2e-136	95.1
WP_000934769.1\|1554456_1554927_-	single-stranded DNA-binding protein	A0A0E3T9H6	Staphylococcus_phage	5.7e-81	100.0
WP_076692545.1\|1554927_1555530_-	MBL fold metallo-hydrolase	S4SWA4	Staphylococcus_phage	8.9e-87	100.0
WP_000138475.1\|1555625_1556546_-	recombinase RecT	A0A2I6PDH5	Staphylococcus_phage	2.3e-166	100.0
WP_047213630.1\|1556547_1558503_-	AAA family ATPase	R9QT82	Staphylococcus_phage	0.0e+00	99.8
WP_001205732.1\|1558499_1558763_-	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
WP_000291489.1\|1558771_1559032_-	DUF1108 family protein	A0A1W6JQ03	Staphylococcus_phage	7.6e-43	100.0
WP_000066020.1\|1559123_1559285_-	DUF1270 domain-containing protein	A0A2I6PDF7	Staphylococcus_phage	1.9e-20	100.0
WP_001120935.1\|1559281_1559602_-	DUF771 domain-containing protein	Q4ZDR7	Staphylococcus_virus	1.5e-56	100.0
WP_047213632.1\|1559660_1559888_+	hypothetical protein	A7TWL9	Staphylococcus_phage	1.1e-37	98.7
WP_000389906.1\|1559889_1560081_-	hypothetical protein	A7TWL8	Staphylococcus_phage	2.8e-26	100.0
WP_000768245.1\|1560130_1560487_+	DUF2513 domain-containing protein	A0A1P8L6H1	Staphylococcus_phage	6.1e-59	100.0
WP_001148853.1\|1560481_1560676_-	hypothetical protein	Q4ZDS1	Staphylococcus_virus	2.9e-23	98.4
WP_047213634.1\|1560691_1561441_-	phage antirepressor KilAC domain-containing protein	Q8SDM9	Staphylococcus_phage	1.7e-135	99.2
WP_047213263.1\|1561497_1561710_+	hypothetical protein	A0A2H4JBA9	uncultured_Caudovirales_phage	1.6e-14	55.1
WP_000435357.1\|1561816_1562260_-	hypothetical protein	A7TWF2	Staphylococcus_phage	8.9e-76	100.0
WP_000213811.1\|1562307_1562520_-	helix-turn-helix transcriptional regulator	A7TWF1	Staphylococcus_phage	1.6e-30	100.0
WP_001566740.1\|1562671_1563403_+	helix-turn-helix transcriptional regulator	A0A075LYE4	Staphylococcus_phage	9.8e-88	75.8
WP_178136400.1\|1563414_1563579_+	hypothetical protein	A0A2I6PDR9	Staphylococcus_phage	8.7e-21	100.0
WP_001089804.1\|1563556_1563742_+	hypothetical protein	A0A2I6PDS4	Staphylococcus_phage	2.3e-25	100.0
WP_000705240.1\|1563941_1564124_+	hypothetical protein	A0A2I6PDR4	Staphylococcus_phage	5.3e-27	100.0
WP_001013104.1\|1564159_1564306_+	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
WP_058008167.1\|1565023_1566049_+\|integrase	site-specific integrase	A0A0H3U2W9	Staphylococcus_phage	1.8e-175	99.1
WP_000595397.1\|1567453_1568470_-	bi-component leukocidin LukGH subunit G	A0A1X9IGW5	Staphylococcus_phage	8.7e-26	30.2
WP_000791409.1\|1568491_1569547_-	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	1.9e-36	34.6
1582341:1582358	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2654858 : 2670458

Staphylococcus_phage(95.24%)

integrase,coat,terminase

attL 2656533:2656547|attR 2659068:2659082

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000934799.1\|2654858_2655362_+	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_000897044.1\|2655413_2655656_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_000281092.1\|2655987_2656614_-	hypothetical protein	NA	NA	NA	NA
2656533:2656547	attL	NA	NA	NA	NA
WP_000270126.1\|2657300_2658515_-\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	8.0e-220	96.8
WP_000142630.1\|2658813_2659548_-	helix-turn-helix transcriptional regulator	Q4ZE79	Staphylococcus_phage	8.5e-132	98.4
2659068:2659082	attR	NA	NA	NA	NA
WP_001063624.1\|2659697_2659910_+	helix-turn-helix transcriptional regulator	Q4ZE78	Staphylococcus_phage	3.4e-33	98.6
WP_001138298.1\|2659910_2660183_+	winged helix-turn-helix domain-containing protein	Q4ZE77	Staphylococcus_phage	3.4e-46	100.0
WP_000784887.1\|2660194_2660341_+	hypothetical protein	NA	NA	NA	NA
WP_001058495.1\|2660333_2660543_+	hypothetical protein	Q4ZE76	Staphylococcus_phage	2.9e-29	94.2
WP_000383747.1\|2660545_2660872_+	DUF1474 family protein	Q4ZE75	Staphylococcus_phage	3.7e-47	88.0
WP_058008337.1\|2660936_2661806_+	primase C-terminal domain-containing protein	Q4ZE74	Staphylococcus_phage	1.2e-164	95.8
WP_000447469.1\|2661819_2663529_+	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	1.4e-302	92.8
WP_058008339.1\|2663838_2664219_+	hypothetical protein	Q4ZE71	Staphylococcus_phage	4.9e-67	96.0
WP_001047698.1\|2664215_2664857_+	hypothetical protein	Q4ZE67	Staphylococcus_phage	7.2e-111	93.0
WP_001190614.1\|2665306_2665648_+	hypothetical protein	Q4ZE66	Staphylococcus_phage	2.9e-58	100.0
WP_000214172.1\|2665678_2666332_+	hypothetical protein	Q4ZE82	Staphylococcus_phage	2.6e-116	99.5
WP_000771368.1\|2666384_2666912_+\|coat	spore coat protein	A0A1W6JQH7	Staphylococcus_phage	3.5e-87	97.1
WP_000358778.1\|2666914_2667256_+	hypothetical protein	A0A1W6JQM3	Staphylococcus_phage	1.7e-58	100.0
WP_058008341.1\|2667252_2667822_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	6.0e-101	97.4
WP_000278086.1\|2668128_2668929_+	staphylococcal enterotoxin type B	A0A097PAT7	Streptococcus_pyogenes_phage	1.9e-52	46.5
WP_001035615.1\|2669006_2669564_-	DUF4888 domain-containing protein	A0A1W6JQE5	Staphylococcus_phage	3.6e-66	71.6
WP_001788502.1\|2669937_2670090_+	hypothetical protein	A0A0F6N3H2	Staphylococcus_phage	3.1e-20	100.0
WP_000139423.1\|2670160_2670271_+	hypothetical protein	W5R8J7	Staphylococcus_phage	1.7e-12	100.0
WP_001286805.1\|2670272_2670458_+	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.7e-26	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013137

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection