CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013287	Listeria monocytogenes strain WSLC 1020 chromosome, complete genome	2 crisprs	DinG,WYL,csa3,casR,RT,cas3,DEDDh	0	3	3	0

1. NZ_CP013287

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013287_1

• CRISPR_ID: NZ_CP013287_1
• CRISPR_location: 1612335-1612493
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP013287_1

Consensus_repeat	Method
GCTTCTTGGTTTTAATGCTCCTGTTACATCGGAACCGAGCTCATTCGAATTTCC	CRISPRCasFinder

spacers of NZ_CP013287_1

>1.1|1612389|51|NZ_CP013287|CRISPRCasFinder
ACCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGACGCCAAA

CRISPR arrays and Neighbor proteins around NZ_CP013287_1

CRISPR arrays

The CRISPR arrays of NZ_CP013287_1

>merge|NZ_CP013287|1|1612335-1612493|CRISPRCasFinder
GCTTCTTGGTTTTAATGCTCCTGTTACATCGGAACCGAGCTCATTCGAATTTCCACCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGACGCCAAAGCTTCTTGGTTTTAATGCTCCTGTTACATCAGAACCGAGCTCATTCGAATTTCC

>NZ_CP013287|1|1|1612335-1612493|CRISPRCasFinder
GCTTCTTGGTTTTAATGCTCCTGTTACATCGGAACCGAGCTCATTCGAATTTCC	ACCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGACGCCAAA
GCTTCTTGGTTTTAATGCTCCTGTTACATCAGAACCGAGCTCATTCGAATTTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013287.1|WP_003728887.1|1599531_1600224_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP013287.1|WP_003730484.1|1606648_1607602_-|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl|CDD|176497
NZ_CP013287.1|WP_003730481.1|1613442_1614312_+|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl|CDD|214813
NZ_CP013287.1|WP_003730479.1|1614842_1615298_+|YehR-family-lipoprotein	unknown	unknown	gnl|CDD|227145
NZ_CP013287.1|WP_003722740.1|1617732_1618356_+|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl|CDD|235534
NZ_CP013287.1|WP_014930313.1|1609755_1611288_+|zinc-metalloproteinase-Mpl	unknown	unknown	gnl|CDD|225768
NZ_CP013287.1|WP_003722726.1|1602541_1602850_+|septation-protein-SpoVG	unknown	unknown	gnl|CDD|237321
NZ_CP013287.1|WP_003722724.1|1600220_1601429_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NZ_CP013287.1|WP_003728886.1|1602114_1602423_+|septation-protein-SpoVG	unknown	unknown	gnl|CDD|237321
NZ_CP013287.1|WP_003725735.1|1615348_1615681_-|putative-heavy-metal-binding-protein	unknown	unknown	gnl|CDD|179228
NZ_CP013287.1|WP_003730474.1|1619811_1623351_+|transcription-repair-coupling-factor	unknown	unknown	gnl|CDD|224118
NZ_CP013287.1|WP_003730483.1|1607844_1609434_+|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl|CDD|366559
NZ_CP013287.1|WP_003730478.1|1615746_1616421_-|DNA-alkylation-repair-protein	unknown	unknown	gnl|CDD|378033
NZ_CP013287.1|WP_003730480.1|1614383_1614707_+|DUF5502-family-protein	unknown	unknown	gnl|CDD|340321
NZ_CP013287.1|WP_003730485.1|1605661_1606375_-|listeriolysin-transcriptional-regulator-PrfA	unknown	unknown	gnl|CDD|223736
NZ_CP013287.1|WP_014930315.1|1616497_1617439_-|L-lactate-dehydrogenase	unknown	unknown	gnl|CDD|178836
NZ_CP013287.1|WP_003730476.1|1618445_1619030_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NZ_CP013287.1|WP_012582098.1|1603237_1604611_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl|CDD|184643
NZ_CP013287.1|WP_003722728.1|1604661_1605618_+|ribose-phosphate-diphosphokinase	unknown	unknown	gnl|CDD|234929
NZ_CP013287.1|WP_003730475.1|1619136_1619697_+|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl|CDD|235457

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013287.1|WP_003728887.1|1599531_1600224_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.3223e-121
NZ_CP013287.1|WP_003730484.1|1606648_1607602_-|phosphatidylinositol-specific-phospholipase-C	gnl|CDD|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	1.24732e-111
NZ_CP013287.1|WP_003730481.1|1613442_1614312_+|phosphatidylcholine-phospholipase-C	gnl|CDD|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	1.45492e-85
NZ_CP013287.1|WP_003730479.1|1614842_1615298_+|YehR-family-lipoprotein	gnl|CDD|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	8.76604e-54
NZ_CP013287.1|WP_003722740.1|1617732_1618356_+|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl|CDD|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_CP013287.1|WP_014930313.1|1609755_1611288_+|zinc-metalloproteinase-Mpl	gnl|CDD|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	7.43513e-136
NZ_CP013287.1|WP_003722726.1|1602541_1602850_+|septation-protein-SpoVG	gnl|CDD|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_CP013287.1|WP_003722724.1|1600220_1601429_+|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	4.34799e-62
NZ_CP013287.1|WP_003728886.1|1602114_1602423_+|septation-protein-SpoVG	gnl|CDD|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.2807e-53
NZ_CP013287.1|WP_003725735.1|1615348_1615681_-|putative-heavy-metal-binding-protein	gnl|CDD|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_CP013287.1|WP_003730474.1|1619811_1623351_+|transcription-repair-coupling-factor	gnl|CDD|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP013287.1|WP_003730483.1|1607844_1609434_+|cholesterol-dependent-cytolysin-listeriolysin-O	gnl|CDD|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	2.18653e-179
NZ_CP013287.1|WP_003730478.1|1615746_1616421_-|DNA-alkylation-repair-protein	gnl|CDD|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	9.72852e-22
NZ_CP013287.1|WP_003730480.1|1614383_1614707_+|DUF5502-family-protein	gnl|CDD|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	1.96971e-44
NZ_CP013287.1|WP_003730485.1|1605661_1606375_-|listeriolysin-transcriptional-regulator-PrfA	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.58438e-12
NZ_CP013287.1|WP_014930315.1|1616497_1617439_-|L-lactate-dehydrogenase	gnl|CDD|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_CP013287.1|WP_003730476.1|1618445_1619030_+|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.31075e-09
NZ_CP013287.1|WP_012582098.1|1603237_1604611_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl|CDD|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP013287.1|WP_003722728.1|1604661_1605618_+|ribose-phosphate-diphosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP013287.1|WP_003730475.1|1619136_1619697_+|aminoacyl-tRNA-hydrolase	gnl|CDD|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	3.85727e-108

Protein sequences

>NZ_CP013287.1|WP_014930313.1|1609755_1611288_+|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFTMTVKADSVGEERLQNNIQAKRNPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLKITNQIKMTEKNAIEKAFEAIGQSEAHVKSYIGNPVKEKEIIINSRTKRLVYNIKLIFAEPEVASWIIQVDAETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLNHKTDASFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYASLPITEEGDWGGVHFNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYGEDASIKVAEAWEAVGVN
>NZ_CP013287.1|WP_003730483.1|1607844_1609434_+|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILISLPIAQQTEAKDASAFHKEDLISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEINYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNSVDNPIE
>NZ_CP013287.1|WP_003730484.1|1606648_1607602_-|phosphatidylinositol-specific-phospholipase-C
MYKNYLQRTLVLLLCFVLYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAAISIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDIRGKILLLSENHTKKPLVINSHKFGMQFGASNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_CP013287.1|WP_003730485.1|1605661_1606375_-|listeriolysin-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGEETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQENVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_CP013287.1|WP_003722728.1|1604661_1605618_+|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_CP013287.1|WP_012582098.1|1603237_1604611_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQEEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDNVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPDDALGIARAKQDNKLGYAKHLNHGK
>NZ_CP013287.1|WP_003722726.1|1602541_1602850_+|septation-protein-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_CP013287.1|WP_003728886.1|1602114_1602423_+|septation-protein-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESVVEEN
>NZ_CP013287.1|WP_003722724.1|1600220_1601429_+|FtsX-like-permease-family-protein
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_CP013287.1|WP_003728887.1|1599531_1600224_+|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDNVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA
>NZ_CP013287.1|WP_003730481.1|1613442_1614312_+|phosphatidylcholine-phospholipase-C
MKFKKVVLGMCLTASVLVFPVTIKANACCDEYLKPPTAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVDHMRANLMNELKNFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDKDNTYLPGFANAKITGAKYFNQSVADYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVVKRFCSNDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_CP013287.1|WP_003730480.1|1614383_1614707_+|DUF5502-family-protein
MYIKGRLIFFFVVLVIALCSVLILLIIKMSVWKEEPFNLSDAKEIECLGSCKIKNTNQKIHFFSIKKNLFEERGNIAGISNEHEQKVADKSIFIVILDDEKGVANEE
>NZ_CP013287.1|WP_003730479.1|1614842_1615298_+|YehR-family-lipoprotein
MKMLKKGTAVLFVMVMAMMLVACGGKEETRTFTLSQNGVESKLVYTYKGDKVTKQTAENTMSYTALSVSSKEDAEKLLKETSDKFQNIDGLKEKIEYKDDKAIETIEVDYTKIASEDMNKIPGMASGDASKGISMKESAKLLESQGYKENK
>NZ_CP013287.1|WP_003725735.1|1615348_1615681_-|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_CP013287.1|WP_003730478.1|1615746_1616421_-|DNA-alkylation-repair-protein
MITFDELNAELQALENPNTIKIFRNHGCPETLELYGLKIGDLKKIISREKLKKNHELAIELIESNNSDLIYLGLLAIDPNKITIEQIEKWNVAFRETWSQLTFGLASVVSKRDDALLFAKKWIESDYDLTKSMGWQIYSEHINDLPEAEALLQRAKDTLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
>NZ_CP013287.1|WP_014930315.1|1616497_1617439_-|L-lactate-dehydrogenase
MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIGDAMDLSHAVPFSTPKKIYSANYSDCHDANLVVVTAGTAQKPGETRLDLVNRNIKIMKGIVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADYLKVDARNVHGYILGEHGDTEFPAWSHTTVGDLPIAEWITEDEQGAMDTIFVSVRDAAYEIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQGVRHIVEMNLNEKEKEQMKNSADTLKKVLDDAMKQVD
>NZ_CP013287.1|WP_003722740.1|1617732_1618356_+|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_CP013287.1|WP_003730476.1|1618445_1619030_+|GNAT-family-N-acetyltransferase
MLDKSVPHISAIMVNHDATNYPEFHLPEGYSFCFYKDGLEEDWCRLQLETGQVPSMDSIRARFETEFGNEKEKLAKRCVFVEAPNGGIIGTAMLWDGNTFGEMESRIHWVAVLDSHGGKGIAKALLSKILGLNKNDFVYLTTQTGSYQAIYLYQKFGFEKYVGKTPKNWKTVNFQEEKEAAWQIIENKIAEHQA
>NZ_CP013287.1|WP_003730475.1|1619136_1619697_+|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVIHYVLGDFPKTEQPDIIAAIQKSADAIEDYAQTPFIEVMNKYNQK
>NZ_CP013287.1|WP_003730474.1|1619811_1623351_+|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMTHTLNELKENEDKQALVENLEEDLEMLRSGVKPDMFFKYIGLAYPDPASLFDYLPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEANHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAIVILAPNIERAEKMQQTLADYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELEAVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKEKASTEN

Crispr_ID: NZ_CP013287_2

• CRISPR_ID: NZ_CP013287_2
• CRISPR_location: 1947367-1948037
• CRISPR_type: Orphan
• Repeat_type: I-A
• Spacer_info: 10 spacers

Consensus repeat of NZ_CP013287_2

Consensus_repeat	Method
GTTTTAGTTACTTAATGTGAAATGTAAAT	PILER-CR
GTTTTAGTTACTTAATGTGAAATGTAAAT	CRISPRCasFinder
GTTTTAGTTACTTANTGTGAAATGTAAAT	CRT

spacers of NZ_CP013287_2

>2.1|1947396|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
ACGATTGAAAAACTGCAAAAGGTCGCAGACTTCTT
>2.2|1947460|37|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
TTTCCCACTACTGCCTTAAAATGCGTGCCTGGCGTGA
>2.3|1947526|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
ACATGCGACACAGTTCGCGGTGAAATTCCGCAGC
>2.4|1947589|36|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
ATCTCTATCAATTGGCAAAAGTGAATTTGTGGTAGT
>2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
TTGTCATCATATTTAAAAACTTTTATTAACTCACT
>2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
ATTTTTAACATAAAAAATAAGCCTACTCGGCTTT
>2.7|1947781|36|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
ATGTGTAATTTTATTGGCTTCATTGATTAGTGTTTC
>2.8|1947846|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT
TTATGACTTCATCACCTTCCATGTAACACTATTTT
>2.9|1947910|38|NZ_CP013287|PILER-CR
GATATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTT
>2.10|1947910|35|NZ_CP013287|CRISPRCasFinder,CRT
ATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTT
>2.11|1947974|35|NZ_CP013287|CRISPRCasFinder,CRT
GGAATCACGGATAGTCAGGCGAAGATAACTAAACC

CRISPR arrays and Neighbor proteins around NZ_CP013287_2

CRISPR arrays

The CRISPR arrays of NZ_CP013287_2

>merge|NZ_CP013287|2|1947367-1948037|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGTTACTTAATGTGAAATGTAAATACGATTGAAAAACTGCAAAAGGTCGCAGACTTCTTGTTTTAGTTACTTAATGTGAAATGTAAATTTTCCCACTACTGCCTTAAAATGCGTGCCTGGCGTGAGTTTTAGTTACTTAATGTGAAATGTAAATACATGCGACACAGTTCGCGGTGAAATTCCGCAGCGTTTTAGTTACTTAATGTGAAATGTAAATATCTCTATCAATTGGCAAAAGTGAATTTGTGGTAGTGTTTTAGTTACTTAATGTGAAATGTAAATTTGTCATCATATTTAAAAACTTTTATTAACTCACTGTTTTAGTTACTTATTGTGAAATGTAAATATTTTTAACATAAAAAATAAGCCTACTCGGCTTTGTTTTAGTTACTTATTGTAAAATGTAAATATGTGTAATTTTATTGGCTTCATTGATTAGTGTTTCGTTTTAGTTACTTATTGTGAAATGTAAATTTATGACTTCATCACCTTCCATGTAACACTATTTTGTTTTAGTTACTTATTGTGAAATGTAGATATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTTGTTTTATTTACTTAATGTGAAATGTAAATGGAATCACGGATAGTCAGGCGAAGATAACTAAACCGTTTTAATTACTTATCATAAAATATAAAT

>NZ_CP013287|2|1|1947367-1947973|PILER-CR
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACGATTGAAAAACTGCAAAAGGTCGCAGACTTCTT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTTCCCACTACTGCCTTAAAATGCGTGCCTGGCGTGA
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACATGCGACACAGTTCGCGGTGAAATTCCGCAGC
GTTTTAGTTACTTAATGTGAAATGTAAAT	ATCTCTATCAATTGGCAAAAGTGAATTTGTGGTAGT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTGTCATCATATTTAAAAACTTTTATTAACTCACT
GTTTTAGTTACTTATTGTGAAATGTAAAT	ATTTTTAACATAAAAAATAAGCCTACTCGGCTTT
GTTTTAGTTACTTATTGTAAAATGTAAAT	ATGTGTAATTTTATTGGCTTCATTGATTAGTGTTTC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTATGACTTCATCACCTTCCATGTAACACTATTTT
GTTTTAGTTACTTATTGTGAAATGTAGAT	ATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTTGTT
TTATTTACTTAATGTGAAATGTAAAT

>NZ_CP013287|2|2|1947367-1948037|CRISPRCasFinder
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACGATTGAAAAACTGCAAAAGGTCGCAGACTTCTT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTTCCCACTACTGCCTTAAAATGCGTGCCTGGCGTGA
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACATGCGACACAGTTCGCGGTGAAATTCCGCAGC
GTTTTAGTTACTTAATGTGAAATGTAAAT	ATCTCTATCAATTGGCAAAAGTGAATTTGTGGTAGT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTGTCATCATATTTAAAAACTTTTATTAACTCACT
GTTTTAGTTACTTATTGTGAAATGTAAAT	ATTTTTAACATAAAAAATAAGCCTACTCGGCTTT
GTTTTAGTTACTTATTGTAAAATGTAAAT	ATGTGTAATTTTATTGGCTTCATTGATTAGTGTTTC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTATGACTTCATCACCTTCCATGTAACACTATTTT
GTTTTAGTTACTTATTGTGAAATGTAGAT	ATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTT
GTTTTATTTACTTAATGTGAAATGTAAAT	GGAATCACGGATAGTCAGGCGAAGATAACTAAACC
GTTTTAATTACTTATCATAAAATATAAAT

>NZ_CP013287|2|1|1947367-1948037|CRT
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACGATTGAAAAACTGCAAAAGGTCGCAGACTTCTT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTTCCCACTACTGCCTTAAAATGCGTGCCTGGCGTGA
GTTTTAGTTACTTAATGTGAAATGTAAAT	ACATGCGACACAGTTCGCGGTGAAATTCCGCAGC
GTTTTAGTTACTTAATGTGAAATGTAAAT	ATCTCTATCAATTGGCAAAAGTGAATTTGTGGTAGT
GTTTTAGTTACTTAATGTGAAATGTAAAT	TTGTCATCATATTTAAAAACTTTTATTAACTCACT
GTTTTAGTTACTTATTGTGAAATGTAAAT	ATTTTTAACATAAAAAATAAGCCTACTCGGCTTT
GTTTTAGTTACTTATTGTAAAATGTAAAT	ATGTGTAATTTTATTGGCTTCATTGATTAGTGTTTC
GTTTTAGTTACTTATTGTGAAATGTAAAT	TTATGACTTCATCACCTTCCATGTAACACTATTTT
GTTTTAGTTACTTATTGTGAAATGTAGAT	ATCACTCCCGGCTTATCTAGCGGATTCCCTTGTTT
GTTTTATTTACTTAATGTGAAATGTAAAT	GGAATCACGGATAGTCAGGCGAAGATAACTAAACC
GTTTTAATTACTTATCATAAAATATAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013287.1|WP_003725724.1|1950597_1951056_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224759
NZ_CP013287.1|WP_077906970.1|1949526_1950207_+|type-1-glutamine-amidotransferase	unknown	unknown	gnl|CDD|153212
NZ_CP013287.1|WP_003730559.1|1943413_1944460_+|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl|CDD|176198
NZ_CP013287.1|WP_014930368.1|1948114_1948756_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP013287.1|WP_003730178.1|1953845_1955276_-|CapA-family-protein	unknown	unknown	gnl|CDD|225399
NZ_CP013287.1|WP_014930367.1|1938420_1939071_+|transaldolase	unknown	unknown	gnl|CDD|223254
NZ_CP013287.1|WP_003725720.1|1946194_1947130_+|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NZ_CP013287.1|WP_003730558.1|1942357_1942756_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013287.1|WP_003730176.1|1950231_1950591_-|hypothetical-protein	unknown	unknown	gnl|CDD|131113
NZ_CP013287.1|WP_003727301.1|1944475_1944769_+|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl|CDD|99908
NZ_CP013287.1|WP_003721289.1|1941873_1942341_+|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl|CDD|238129
NZ_CP013287.1|WP_003730179.1|1955396_1956212_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|223483
NZ_CP013287.1|WP_003730177.1|1951437_1953267_+|LapB-repeat-containing-protein	unknown	unknown	gnl|CDD|380190
NZ_CP013287.1|WP_014930372.1|1956492_1956861_-|DUF1304-domain-containing-protein	unknown	unknown	gnl|CDD|226282
NZ_CP013287.1|WP_014930369.1|1948766_1949303_-|hypothetical-protein	unknown	unknown	gnl|CDD|213029
NZ_CP013287.1|WP_003730557.1|1941243_1941846_+|SIS-domain-containing-protein	unknown	unknown	gnl|CDD|223865
NZ_CP013287.1|WP_003730556.1|1939179_1941240_+|BglG-family-transcription-antiterminator	unknown	unknown	gnl|CDD|226234
NZ_CP013287.1|WP_003721301.1|1953367_1953799_+|universal-stress-protein	unknown	unknown	gnl|CDD|366180
NZ_CP013287.1|WP_003725716.1|1942766_1943417_+|ribulose-phosphate-3-epimerase	unknown	unknown	gnl|CDD|223114
NZ_CP013287.1|WP_003725719.1|1944783_1946055_+|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl|CDD|226298

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013287.1|WP_077906970.1|1949526_1950207_+|type-1-glutamine-amidotransferase	gnl|CDD|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	5.70954e-61
NZ_CP013287.1|WP_003730559.1|1943413_1944460_+|galactitol-1-phosphate-5-dehydrogenase	gnl|CDD|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0
NZ_CP013287.1|WP_003730177.1|1951437_1953267_+|LapB-repeat-containing-protein	gnl|CDD|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	1.25629e-121
NZ_CP013287.1|WP_014930367.1|1938420_1939071_+|transaldolase	gnl|CDD|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	2.41593e-64
NZ_CP013287.1|WP_003725720.1|1946194_1947130_+|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	6.72103e-154
NZ_CP013287.1|WP_003730176.1|1950231_1950591_-|hypothetical-protein	gnl|CDD|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	5.41157e-66
NZ_CP013287.1|WP_003730178.1|1953845_1955276_-|CapA-family-protein	gnl|CDD|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	2.36344e-102
NZ_CP013287.1|WP_003727301.1|1944475_1944769_+|PTS-sugar-transporter-subunit-IIB	gnl|CDD|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.39912e-27
NZ_CP013287.1|WP_003721289.1|1941873_1942341_+|PTS-sugar-transporter-subunit-IIA	gnl|CDD|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	3.45565e-37
NZ_CP013287.1|WP_003730179.1|1955396_1956212_-|histidine-phosphatase-family-protein	gnl|CDD|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	1.99041e-49
NZ_CP013287.1|WP_014930372.1|1956492_1956861_-|DUF1304-domain-containing-protein	gnl|CDD|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	7.0667e-40
NZ_CP013287.1|WP_003725724.1|1950597_1951056_-|MarR-family-transcriptional-regulator	gnl|CDD|224759	COG1846, MarR, Transcriptional regulators [Transcription].	9.49445e-13
NZ_CP013287.1|WP_003730557.1|1941243_1941846_+|SIS-domain-containing-protein	gnl|CDD|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	4.97357e-76
NZ_CP013287.1|WP_003730556.1|1939179_1941240_+|BglG-family-transcription-antiterminator	gnl|CDD|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	2.96435e-80
NZ_CP013287.1|WP_014930369.1|1948766_1949303_-|hypothetical-protein	gnl|CDD|213029	cd11375, Peptidase_M54, Peptidase family M54, also called archaemetzincins or archaelysins. Peptidase M54 (archaemetzincin or archaelysin) is a zinc-dependent aminopeptidase that contains the consensus zinc-binding sequence HEXXHXXGXXH/D and a conserved Met residue at the active site, and is thus classified as a metzincin. Archaemetzincins, first identified in archaea, are also found in bacteria and eukaryotes, including two human members, archaemetzincin-1 and -2 (AMZ1 and AMZ2). AMZ1 is mainly found in the liver and heart while AMZ2 is primarily expressed in testis and heart; both have been reported to degrade synthetic substrates and peptides. The Peptidase M54 family contains an extended metzincin concensus sequence of HEXXHXXGX3CX4CXMX17CXXC such that a second zinc ion is bound to four cysteines, thus resembling a zinc finger. Phylogenetic analysis of this family reveals a complex evolutionary process involving a series of lateral gene transfer, gene loss and genetic duplication events.	0.000163511
NZ_CP013287.1|WP_003721301.1|1953367_1953799_+|universal-stress-protein	gnl|CDD|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_CP013287.1|WP_003725716.1|1942766_1943417_+|ribulose-phosphate-3-epimerase	gnl|CDD|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	5.23266e-109
NZ_CP013287.1|WP_003725719.1|1944783_1946055_+|PTS-galactitol-transporter-subunit-IIC	gnl|CDD|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	1.81393e-177

Protein sequences

>NZ_CP013287.1|WP_003725720.1|1946194_1947130_+|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGADRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NZ_CP013287.1|WP_003725719.1|1944783_1946055_+|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIFKIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NZ_CP013287.1|WP_003727301.1|1944475_1944769_+|PTS-sugar-transporter-subunit-IIB
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NZ_CP013287.1|WP_003730559.1|1943413_1944460_+|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEQPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE
>NZ_CP013287.1|WP_003725716.1|1942766_1943417_+|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLSKGVLTE
>NZ_CP013287.1|WP_003730558.1|1942357_1942756_+|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMFVVMIYATIILYAKWTLAYYLPKKMNQLVEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NZ_CP013287.1|WP_003721289.1|1941873_1942341_+|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQDKEKLLTEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NZ_CP013287.1|WP_003730557.1|1941243_1941846_+|SIS-domain-containing-protein
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NZ_CP013287.1|WP_003730556.1|1939179_1941240_+|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTAKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDSNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLESVTKEKIMQTINQLVIREDE
>NZ_CP013287.1|WP_014930367.1|1938420_1939071_+|transaldolase
MHLDSANLEDVKKIQTNSIFKGITTNPTILVKEKCNRQTAINRILELTDKQVFVQTVGFSYEEILADTRMLLAMFGKEKIAIKIPAHEAGINVIDTLKKEDKTIQILGTAIYSADQAIAAALAGADFVAPYVNRMSAANIDPFKEIAGMRHFFDKKALNTKIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNKDATLYEK
>NZ_CP013287.1|WP_014930368.1|1948114_1948756_-|hypothetical-protein
MKKFVTAMLFLTFLLLVGCSAQNEKAAPPSEKEVKVTKETKISKNGSIDADYDIPEDSKELENKSEDIVKVKLVKNKKIGDYDKEKMEYSSTISEVEVLETYKGTFKKGDKIDVSEPWYLNEGAYESIENYIALEQEQEYTLFLRGGHDSEKLSSIISMGYGKFNEDLKETDATLTDFENLGEVEAYNFISEEKEDVTNYTEIKEDVLKEFND
>NZ_CP013287.1|WP_014930369.1|1948766_1949303_-|hypothetical-protein
MKQSKKSWKVMAAIVIILSITFTTTVTSNAADLRNGSAFSFKLSDPKGKFNNGATISAHKKAFDTAYAKINASSSRIKLVRSGSGPTIRTRSTNKRDEWYGQMSGNSKGSTITINKYTTTRDKFNQANYNKTALHEMGHAFGMKHQSSSSITVMKQGKYAYNDYTTLDKNNIKYKYGK
>NZ_CP013287.1|WP_077906970.1|1949526_1950207_+|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLSFFPESLNVFHWHQDTFALPAGATRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILQIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NZ_CP013287.1|WP_003730176.1|1950231_1950591_-|hypothetical-protein
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADKLDEDAIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NZ_CP013287.1|WP_003725724.1|1950597_1951056_-|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE
>NZ_CP013287.1|WP_003730177.1|1951437_1953267_+|LapB-repeat-containing-protein
MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLNYNEANQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSARLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMNSYTISSGTYDQYFDISHTLDLTADESFDYNQYDATSEEQFLKDIHAETDDGTAVQSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITADSQISYKKESTKSVDEFLQEIHSSVTGNAVLTSNFDKVVDLNTPGEYTVTLHATNDRGQQADPVTVIVTVTASDGGHVNPIPPTPEVKPTPQEETDPTIIPEPQSENSEDQVKENNTKTEEKANKTSLTTKENKVEKADKAEKANQAKAKALPQTGDTNKNALPIAGVMLSLAALLIIRKSKS
>NZ_CP013287.1|WP_003721301.1|1953367_1953799_+|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_CP013287.1|WP_003730178.1|1953845_1955276_-|CapA-family-protein
MKKLTYIIITGLVLVFIVGAFWITNSTNKTEQKATPTETPKKAKPANVKTISSQAKKTLNSLASSGADKASISDLNQLIKELKSYPVEKNDSGAYLQNLTACLEAVKSYTTGKADEKALGKVYPDFLASEQKLSAIEKTSQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFKKNNGNNTYVFKNCLPWFKSDDYTVINAESAFTNATKAENKMWRIKSDPAHVAFLPASGVDAANLANNHTMDYFQVGYDETLKAFKDNNIPVFNADAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_CP013287.1|WP_003730179.1|1955396_1956212_-|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDQRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGISPKGFADSVAALDKTRVKEGENWPAEDYATIQARLKEGITDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_CP013287.1|WP_014930372.1|1956492_1956861_-|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEIFFANTKLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAEFAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVVVLLV

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	MH341451	Listeria phage PSU-VKH-LP019, complete genome	18040-18074	1	0.971
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	KJ094022	Listeria phage LP-030-3, complete genome	27251-27285	1	0.971
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	AJ312240	Bacteriophage PSA complete genome	14984-15018	1	0.971
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	NC_021539	Listeria phage LP-030-2, complete genome	15479-15512	1	0.971
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	MH341452	Listeria phage PSU-VKH-LP040, complete genome	19343-19376	1	0.971
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	DQ003637	Listeria phage A500, complete genome	19308-19341	1	0.971
NZ_CP013287_2	2.8|1947846|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947846-1947880	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	9170-9204	1	0.971
NZ_CP013287_2	2.8|1947846|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947846-1947880	35	NC_009813	Listeria phage B054, complete genome	9170-9204	1	0.971
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	NC_021539	Listeria phage LP-030-2, complete genome	15006-15040	2	0.943
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	MH341451	Listeria phage PSU-VKH-LP019, complete genome	18514-18547	2	0.941
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	MH341452	Listeria phage PSU-VKH-LP040, complete genome	18869-18903	4	0.886
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	DQ003637	Listeria phage A500, complete genome	18834-18868	4	0.886
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	KP399677	Listeria phage vB_LmoS_188, complete genome	18049-18083	4	0.886
NZ_CP013287_2	2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947654-1947688	35	KP399678	Listeria phage vB_LmoS_293, complete genome	18854-18888	4	0.886
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	KP399677	Listeria phage vB_LmoS_188, complete genome	18523-18556	8	0.765
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	KJ094022	Listeria phage LP-030-3, complete genome	27725-27758	8	0.765
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	KP399678	Listeria phage vB_LmoS_293, complete genome	19328-19361	8	0.765
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	NC_003216	Listeria phage A118, complete genome	19363-19396	9	0.735
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	AJ242593	Bacteriophage A118 complete genome	19363-19396	9	0.735
NZ_CP013287_2	2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT	1947718-1947751	34	NZ_CP017081	Bacillus muralis strain G25-68 plasmid pG25-68, complete sequence	79132-79165	10	0.706

1. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.971

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
ttgtcatcatatttaaaaacttttattaactcgct	Protospacer
********************************.**

2. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 1, identity: 0.971

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
ttgtcatcatatttaaaaacttttattaactcgct	Protospacer
********************************.**

3. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 1, identity: 0.971

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
ttgtcatcatatttaaaaacttttattaactcgct	Protospacer
********************************.**

4. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
attttcaacataaaaaataagcctactcggcttt	Protospacer
*****.****************************

5. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.971

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
attttcaacataaaaaataagcctactcggcttt	Protospacer
*****.****************************

6. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.971

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
attttcaacataaaaaataagcctactcggcttt	Protospacer
*****.****************************

7. spacer 2.8|1947846|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

ttatgacttcatcaccttccatgtaacactatttt	CRISPR spacer
ttatgacttcatcaccttccaagtaacactatttt	Protospacer
********************* *************

8. spacer 2.8|1947846|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 1, identity: 0.971

ttatgacttcatcaccttccatgtaacactatttt	CRISPR spacer
ttatgacttcatcaccttccaagtaacactatttt	Protospacer
********************* *************

9. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 2, identity: 0.943

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
ttgtcgtcatatttaaaaacttttattaactcgct	Protospacer
*****.**************************.**

10. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 2, identity: 0.941

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
attttcaacataaaaaataagcctattcggcttt	Protospacer
*****.*******************.********

11. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 4, identity: 0.886

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
tctgcatcatatttaaaaacttttattaactcgct	Protospacer
*.  ****************************.**

12. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 4, identity: 0.886

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
tctgcatcatatttaaaaacttttattaactcgct	Protospacer
*.  ****************************.**

13. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 4, identity: 0.886

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
tctgcatcatatttaaaaacttttattaactcgct	Protospacer
*.  ****************************.**

14. spacer 2.5|1947654|35|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 4, identity: 0.886

ttgtcatcatatttaaaaacttttattaactcact	CRISPR spacer
tctgcatcatatttaaaaacttttattaactcgct	Protospacer
*.  ****************************.**

15. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 8, identity: 0.765

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
tgtcggtccataaaaaataagcctattcggcttt	Protospacer
  *.    *****************.********

16. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 8, identity: 0.765

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
tgtcggtccataaaaaataagcctattcggcttt	Protospacer
  *.    *****************.********

17. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 8, identity: 0.765

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
tgtcggtccataaaaaataagcctattcggcttt	Protospacer
  *.    *****************.********

18. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 9, identity: 0.735

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
tcatcccccataaaaaataagcctattcggcttc	Protospacer
 . *..  *****************.*******.

19. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 9, identity: 0.735

atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
tcatcccccataaaaaataagcctattcggcttc	Protospacer
 . *..  *****************.*******.

20. spacer 2.6|1947718|34|NZ_CP013287|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017081 (Bacillus muralis strain G25-68 plasmid pG25-68, complete sequence) position: , mismatch: 10, identity: 0.706

-----atttttaacataaaaaataagcctactcggcttt	CRISPR spacer
aaaagat-----gaataaaaaataagcctatttggctta	Protospacer
     **     . ****************.*.***** 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	353198 : 361484	8	Prochlorococcus_phage(33.33%)	NA	NA
DBSCAN-SWA_2	1018606 : 1026434	7	Streptococcus_phage(50.0%)	NA	NA
DBSCAN-SWA_3	1305491 : 1315523	7	Tupanvirus(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP013287|353198:361484|DBSCAN-SWA
ATTAATCGTTCCCTCCATTTTGAATTAATCCTCGAATCACTTTTGGATAAAAAATATGTTCTACTTGATGAATTTTTCCAGCTAAAGTATCTACAGTTTCCGCATGTTCAATCGGTACTTTCACTTGATCAATAATTGGCCCAGTATCCATTCCTGCATCCACAAAGTGCGCGGTGACACCGGTTTCTGAAACATTCGCTTGAATCGCTTGACCAATTGCATCTTTTCCTTTGAATTCAGGCAACAACGACGGGTGCAGGTTCACAATTTGCTCAGGGAATTCCGCTAATAAGGTTGGTCCAATCAAACGCATATATCCTGCTAGCACTAACAAATCAATTTCCAACCCGCGAAGTTCTAGTAAAATTTCTGTTTCAAAAGCTTCTTTATCCGGATAATTTTTCGCTTCAAAAAGAAAAACTGGAATATCATGTTTGTTTGCCCGCTCTAAAACATAAGCATTCGGTTTATCACACACCAGTAATTTCACATGAGGCTTAATAAACTCATCATCCACTAAAGCTTGAAAATTCGAACCGTTACCCGAAGCAAAAATGGCTATATTCATCCTTTTGTTCCTCCTGTGAAAATAACCGCATCATTTTCACGTGTCGTAACTTCGCCAATAACATAAGCTGCTTCTCCGTTTTGAACGAGTACTTCTAATGTTCTTTCCACATCCGCTTTCGCAACTGCCAACACCATACCAATGCCCATGTTGAAAATTTCATACATTTCCATTTCGTTTAATTGGCCGTATTTCTTCATAACGTCAAAAATTGGCAACACTGGCCAGGAACCTAGCTCTACTTTCACAGCTAAATCATTCGTTAACATCCGTGGTAAATTCTCTACAAATCCGCCACCAGTCACATGCGTAATTCCGTGCACATCTATCTCTTTCAATACTTCTAAAACTGGTTTGACATAAATACGTGTTGGTTTAAGTAGCTCTTCCACAAGTGGCACATCTAGTTCACTGATTTCCGCATCGAGTGTCAATTCGTTATCTTTAAAGAAAATTTTGCGCACTAGGGAGTAACCATTACTATGAATCCCGCTAGATGGAATTCCAATGAGTGTATCTCCTTCTTTGACTGCGCCTTCTGTAATTAGTTTCTGTTTCTCTACAGCCCCAACAGTAAAACCTGCTAAATCATAATCTTCTGACCCGTACATATCGGGCATTTCAGCAGTTTCGCCGCCAATTAAAGCCGCACCAGCTTGTTCACAGCCGTCAGCCACGCCTTTAACAATTTGTTCCATTTTCACTGGATCTGTTTTTCCAGTAGCGATATAATCTAAGAAAAATAATGGCTCGGCGCCTTGAGCTAAAATGTCATTCACACACATTGCCACGCAGTCAATCCCGATGGTATCATGCTTATCTGCTTCAATTGCCAAAAGTAATTTTGTCCCAACACCATCCGTACCAGAAACAAGGACAGGTTCTTTTAAATGCAAACTACTTAAGTCAAACATTCCACCAAATGAACCAAGTGCCCCCATCGCGCCTAATCGCTCTGTTCTAGCCACATGTTTTTTGATACGTTCTACAACTTGATAGCCAGCTTCTACGTCCACGCCTGCTTTACTATATGCATTTTCTGCCATTCGATTTGTCACTCCTCATTATTTTTCTGCTTCTAAGCTCGCTAAATATTCCGCTTCATAATCATATAAAGGGGTTGGGTAATCGCCGTTGAAATAAGCCATACAAAGTCCCCCGTAAGGTTCGTTCGGATAAGGTCTGCCAATGGAATCTACTAAACCTTCTTCACTCAAATACTCTAAAGAATCAGCCCCAATAATCCGACAAATTTCATCAACAGAATAATTAGAAGCGATTAATTCATTTCGCGTTTGGATATCAATTCCATAAAAACAAGGATAAGCAAGTGGTGGAGAAGCGATTCTTACGTGAACTTCCGCCGCTCCTGCTTCACGTAAAAGCTGGACAATACGTTTACTTGTCGTCCCGCGAACAATCGAATCATCAATCATGACAACGCGTTTTCCTTCCACAACCCCGCGCACGGCAGAAAGTTTCATTCTAACGCCTTGCTCCCTGAGTTCTTGTGATGGCTGGATAAAAGTTCTTGCCACATATCTATTTTTGATGAGACCAAGTTCGTAAGGAAGACCTGCTTCCTCCGCATAACCAATCGCCGCAGAAATACTGGAATCTGGTACACCTGTAACCACATCTGCATCAATAAACGCCTCTTTTGCTAATCTTTTCCCAGAACGTTTTCTTGCCGAGTGGACATTAATTCCAGCAATATTAGAGTCTGGTCGCGCAAAATAAATGTATTCCATACTGCAAATCGAATGCGTCACATTTTCCGTGAATTTTTCAATTCGAAGCCCGTCATCATTAATAATAATTAGTTCGCCTGGCTCTACATCACGGACAAACTCAGCGCCAACCGTTTCAAAGGCACATGTTTCCGAAGCAACTACGTAAGAATCACCAATGCGACCTATCGAAAGCGGTCTAAAACCATTCGGGTCAAGCGCCGCATACATCGTGTCTTCCGTCAGAAGCATGTACGCAAAGCCACCCTTAACCTTGTTCAAAGCCACTTTTAAATCTTCCACAAAATCACCTGTATGGCTACGTTTAATTAAATGCGCTAACACTTCTGTATCCGAACTCGTTTGAAAAATAGCGCCTTCTTCTTCTAGTTCACGGCGTAAACTTTTCGCATTAACCAAATTCCCATTATGCGCAAGTGCTAAAGAAGAACTATGAAAGTGAAATAAAAATGGTTGTACGTTCCCTAAGTTTTTTTGACCAGCTGTCGCGTATCGAACATGGCCAATGGCTGCTTTACCTTTTAAATCGTCTAGTTCACCATGTTTAAATACGTCTGCTAAAAGGCCGAGATTTCGGTGACCTTTTAGTGTTTCACCGTCTGTCGAAACAATTCCGGCACCTTCTTGACCGCGATGTTGTAAACTATGCAACCCATAATAGGTGATTTCCGCTGCATTGGGATGATCCCAAATACCAAAAATACCACATTCTTCGTTAAGTCCTTTTACTTCAGCAAGCATGGAATAGCCCCTTCCCAAATGGATCGTAATTCCGTTGTTTTCGCTGTAACTTGGTCTTCCTTATGTTTCACACGAATCGTATCATCCTCGGTTACCACACCAAGGCGGTATACTTTTTCCAGTTCCATTAATTGCGCAAAAGCTGCTTCGTTTTCCGGTTTTACCGATACTAAGAAACGTGATTGCGATTCACTGAATAGTTGATTCAACGCAAACGGTACTTCTACATCCGCACCAAGCCCTGCTTTAAAAGTCGCTTCCGCAAGGGCAACACCAAATCCGCCTTCTGCCAAATCGTGACTAGAAGCAACTAGACCTTCCTGAATCGCCGTTAGAAGTAATTGTTGGTATTTTTTCTCTGTCGCTAAATCTAATTCCGGCGCATGTCCGCTAATTTTCCCTTGTTGTAATTTCTGCAATTCCGAACCACTATATTCAGCTTTTGTTTCACCAATTAAGAAAATCACATCGCCACTATTTTTAAAATCTTGCGTCGTAATATGTGCCAAATCTTCTACTAAACCAACCATTCCGATAACTGGCGTTGGATAAATTCCGGTACCATCTGTTTCATTATAAAGCGATACATTCCCTGAGATAACAGGCGTATCAAGTTCTAAACAAGCTGCACTAATACCGTCAGCCGCTTTTTCAATTTCCCAAAAAATTTCTGGTTTTTCCGGATTACCAAAATTCAGTCCATCTGTAATCGCTAGTGGTTTCCCGCCAGAACAAACGATATTGCGCGCCGCTTCCGCAACCGCTATCGCTCCGCCAACTTCTGGATCAAGATACAAATAGCGTGAGTTACAATCTGTCGTCATCGCAATTGCCTTCTCTGTTCCACGCACACGAACAATCGCCGCATCTGAACCAGGTACAACAGCTGTATCCGTCCGAACTTGGTAATCATATTGCTCATAGATATGGCGCTTACTAGCAATCGTTGGCTGAGCAAGCAGTTCTTTCCAAACTCCCACCACATCATCCATAACTGGCACAAACGCTTCCTCTTCTTGGAATGCTTGATAACGAGCTGGTTCTTTTGAAGGCTTATGATAAACTGGCGCGTCTTCCGCAAGTGCATCAACAGGCACGTTCGCAACTACTTCGCCGTGATGAATAATTTTGTACATTTTATCATCCGTTACTTGACCAATCACAACAGCCTCTAAACCATAACGTTCAAATAACGCTTGGATTTCTTCCACATGCCCTTTTTTCACACATAGAAGCATCCGTTCTTGCGATTCAGAAAGCAACATTTCATATGGTGTCATATTGAGTTCCCGTTGCGGCACATCATCCATAATTAATTCTAGCCCAGCGCCCGCTTTTGAAGCCATTTCAGAACTTGAGCTAACGAGTCCAGCAGCTCCCATATCTTGAATTCCCACTAAAATATCCGAATGATCACGAATCACATCTAAACAAGCTTCAAGCAACAATTTCTCCATAAAAGGATCGCCAACCTGTACAGCAGAGCGTTGTTGTTCGCCTTCTTCACTAAACTCTACAGAAGCAAAAGTGGCACCATGAATTCCGTCACGACCAGTTTTAGCACCAACATACATCACCGGGTTGCCAATTCCTTTAGCTTGCCCTTTTTGAATGTCTTTCGCTTCAATTAAGCCTACACACATTGCATTAACTAATGGATTTTTCGTATAACAAGGATCAAATTGGATTTCGCCACCAACCGTTGGAATCCCAATGGAGTTACCGTATCCTGCGATTCCCGCCACGACTTCACTAACTAAGTATTTCGCGTGAGGTGTATCTAATTCGCCGAAACGAAGCGAGTTAAGCATTGCAATCGGTCTAGCTCCCATCGAAAACACATCACGGATAATTCCACCGACCCCAGTTGCAGCACCTTGATACGGCTCCACGTAGGATGGATGATTATGACTCTCCACTTTAAAAGCAACACCTAGACCATCGCCAATATCAACAATCCCAGCACCTTCACCCGGTCCTTGCAACACTTGTTTTCCTTCTGTAGGAAATTTCCGAAGTACTGGTTTAGAATTTTTATAGCTACAATGTTCGGACCACATAACGGAGAAAAGTCCAGTTTCTGTATAATTAGGCTCGCGTCCAAGTATCGAACAAACAAGCTCATATTCACTATCAGTTAAGCCCATTTCTTGATAAATCTTTTGTTCTTTAATTTCTTTTGTCGTTGGCTCCAAGTTAGGCATTTACTTGTTCCTCCTTCCAAGCTTTTACAACGGACTCGAAAAGTCTTAAACCATCAGTACCGCCAATAATTTCTTCTACCGCGCGTTCTGGATGTGGCATCATTCCAAGCACATTACCGCGCTCATTTACGATACCCGCAATATCCGCACGACTACCATTCGGATTAACGCTATCATATGTAAAAACAATTTGGTTATTTTCTTTTAATTTTAAAAGTGTTTCGTCGTCACAGTAATAATTACCTTCTCCGTGAGCAACGGGAACTTGGATAATTTCGCCTTCTTCATAAAGCTCCGTAAACATCGTACTTGCATTTGCCACACGAAGCGGCACTGTTTTACAAATAAAATGCAAATTATTATTTCTAATTAAAGCACCTGGCAACAATCCAATTTCAGTTAAAATTTGGAATCCGTTACACACACCAAGCACTGGTTTTCCCATTTCAGCAAAGCGCAAAACTTCTGGCATAATACTTGAAAATTTCGCAATCGCACCAGTTCGCAAGTAATCTCCGTAAGAAAATCCACCTGGAAGTAAAACCGCATCAAAACCTGCAAGACTTGTTTCCGCATGCCATACATATTCCGCCTCCTCGCCAAGAGAATCGCGAATCGCATGTAGCATATCAAGATCACAATTAGAACCTGGGAACTGAATGACAGCAAACTTCATCGTTTACGCCTCCTCAATTTCATATCGGTAATCTTCCATCACCGGGTTAGTTAACAGTTTGTCGCACATTTCATTTAATACTTCATGAATATCTCGATCTGATTTTGCAACTTTTAATTCCATAAATTTACCAATACGAACATCTTCTACTTCCTCGTAACCCATGCTTTTCGCTGCATCTTTTACTGCAACACCTTGTGGATCTAATACGCTTTTCTTTAAAGTGACATAAACTTTGACATTATACATTTTGTGGCCTCCTAGTTTTGAACTTGCTTTAATCTATTCAATACTTCTGTATACACATCTGTTAAATTGCCAATATTCCGACGAAAGACATCCTTATCGAGCTTTTGATTTGTTTCCTTGTCCCAAAGTCTGCATGTATCAGGCGAAATCTCATCAGCTAGTAAAATATTTCCAGCCGCATCCCGACCAAATTCTAACTTAAAATCAATTAGCGTAATATTCATTTGATTGAATAATTCTTGTAGCACCTTATTAATCGAACGAGCAGCCTGGCGAATCGCGTCCATTTCATTCGTTGTCGCAATCTCTAAATAAAGCACATGGTCATCATTAATAAACGGGTCATCTAACGCATCCTCTTTAAAATAAAATTCCACTATCGCATTTGGAATTGGCTCGCCTTCTTCTTTCCCAAGCCGCTTCGCAAGACTCCCAGCCATCACATTACGAACAACTACTTCAAGTGGAATAATTGATACTTCTTTCACCAATTGTTCCGTTTCCGAAATCGCCCGGATAAAATGACTCTCTATTCCCGCTTCTGCTAAATGAGAAAAAATAAGCGATGTAATTTGGTTATTAAGCTCACCCTTCCCAGCAAAAGATTCCTTTCGTACCCCATTTAGCGCTGTCGCATCGTCCTTATAGGCAACACGCAAGACGCCTGATTCTTCTGTTTTAAAAAGTCGTTTTGCCTTACCTTCATAAACCAGTTCATTAGTCACGATAATTTATCTCCTTATAAATTACTTAACCTCTTTGAAAAAATAAATATCAAAGAGGTTAGGTTGTATTCTGCCCGTAATTATAATCCTAAACGATCAAAAATTAAGTCGACATTCTTCAGGTGATAGTTGTAATCAAAGCAATCTGCAATTTCTTCCGCAGATAGGTTTTCAGTAATGGTTGCATCTTGTTCTACTAATTCACGGAAAGGTACTTGTTTTTCCCAAGCTTCCATTGCTCTTGGTTGCACGACATCATACGCCGCCTCACGAGCTAAACCTTTATCAATAAGCGCCAGTAATACACGCTGTGAATAAATAAGTCCAAGCGTTCTGTCCATATTGCGTTTCATATTTTCTGGGAACACCGTCAAGTTTTTCACGATATTTCCAAAACGATTCAAAATATAATCAAGTAAAATAGTGGAATCAGGCAGAATAATCCGTTCTGCTGAACTATGAGAAATATCACGTTCATGCCAAAGTGGCACATTTTCATAAGCAGTAACCATATGACCGCGAATAACGCGCGCTAACCCCGTTACATTTTCAGAACCAATTGGATTACGTTTATGCGGCATTGCAGATGAACCTTTTTGCCCTTTTGCAAAGAATTCTTCTACTTCACGCACTTCACTTTTTTGCAGTGCACGTACTTCTACCGCAAATTTTTCTACAGAAGTTGCAATTAAAGCTAGCGTTGCCAAGTATTCTGCATGGCGATCACGTTGCAACGTTTGTGTAGAAATCGGCGCAGGAGTTGTTCCTAATTTTTCACATACGTAAGCTTCCACAAAAGGATCAATATTCGCATACGTACCAACCGCACCTGAAATTTTTCCAAATTCAACGCCGTCAGCAGCAAAGTTAAAACGTTCTAAATTACGTTTCATTTCCTCGTACCATAAAGCAAGTTTCAGACCAAAAGTAGTTGGCTCCGCATGAACACCATGTGTACGTCCCATTGTTACGGTATATTTATGTTCTTTTGCTTTTTCGCCAATAATCGCAATGAAATTTTCCAAGTCTTTGCGCAAAATCTCATTCGCTTGTTTTAGCAGATAAGAATTCGCTGTATCCACTACGTCTGTTGAAGTTAAGCCATAATGAACCCATTTACGTTCCGCACCAAGCGATTCCGAAACCGAACGTGTAAATGCTACTACATCATGTCTAGTTTCTAGTTCAATCTCATGAATACGATCCACATCAAACTTCGCATTAGCACGAATCTTTGCAACGTCTTCTTTCGGAATGTCGCCAAGCTCTGCCCATGCTTCACAAGCTAAAATCTCTACTTCCAACCAAGCTTGGTAACGGTTTTGTTCTGTCCAAATGTTGCCCATTTCTTTACGAGTATAACGTTCTAACAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP013287|353198:361484|356241_358461_-|WP_014930521.1|DBSCAN-SWA
MPNLEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNHPSYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGYGNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKLLLEACLDVIRDHSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELNMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARYQAFQEEEAFVPVMDDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIVRVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDLAHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGHAPELDLATEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPFALNQLFSESQSRFLVSVKPENEAAFAQLMELEKVYRLGVVTEDDTIRVKHKEDQVTAKTTELRSIWEGAIPCLLK
>NZ_CP013287|353198:361484|358453_359137_-|WP_003722247.1|DBSCAN-SWA
MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYVWHAETSLAGFDAVLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGALIRNNNLHFICKTVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA
>NZ_CP013287|353198:361484|360191_361484_-|WP_003729814.1|DBSCAN-SWA
MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKEDVAKIRANAKFDVDRIHEIELETRHDVVAFTRSVSESLGAERKWVHYGLTSTDVVDTANSYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFNFAADGVEFGKISGAVGTYANIDPFVEAYVCEKLGTTPAPISTQTLQRDRHAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSENVTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFRELVEQDATITENLSAEEIADCFDYNYHLKNVDLIFDRLGL
>NZ_CP013287|353198:361484|354829_356257_-|WP_003722245.1|DBSCAN-SWA
MLAEVKGLNEECGIFGIWDHPNAAEITYYGLHSLQHRGQEGAGIVSTDGETLKGHRNLGLLADVFKHGELDDLKGKAAIGHVRYATAGQKNLGNVQPFLFHFHSSSLALAHNGNLVNAKSLRRELEEEGAIFQTSSDTEVLAHLIKRSHTGDFVEDLKVALNKVKGGFAYMLLTEDTMYAALDPNGFRPLSIGRIGDSYVVASETCAFETVGAEFVRDVEPGELIIINDDGLRIEKFTENVTHSICSMEYIYFARPDSNIAGINVHSARKRSGKRLAKEAFIDADVVTGVPDSSISAAIGYAEEAGLPYELGLIKNRYVARTFIQPSQELREQGVRMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVQLLREAGAAEVHVRIASPPLAYPCFYGIDIQTRNELIASNYSVDEICRIIGADSLEYLSEEGLVDSIGRPYPNEPYGGLCMAYFNGDYPTPLYDYEAEYLASLEAEK
>NZ_CP013287|353198:361484|353198_353765_-|WP_003729811.1|DBSCAN-SWA
MNIAIFASGNGSNFQALVDDEFIKPHVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRGLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSETGVTAHFVDAGMDTGPIIDQVKVPIEHAETVDTLAGKIHQVEHIFYPKVIRGLIQNGGND
>NZ_CP013287|353198:361484|359397_360111_-|WP_003729813.1|DBSCAN-SWA
MTNELVYEGKAKRLFKTEESGVLRVAYKDDATALNGVRKESFAGKGELNNQITSLIFSHLAEAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAKRLGKEEGEPIPNAIVEFYFKEDALDDPFINDDHVLYLEIATTNEMDAIRQAARSINKVLQELFNQMNITLIDFKLEFGRDAAGNILLADEISPDTCRLWDKETNQKLDKDVFRRNIGNLTDVYTEVLNRLKQVQN
>NZ_CP013287|353198:361484|353761_354811_-|WP_003729812.1|DBSCAN-SWA
MAENAYSKAGVDVEAGYQVVERIKKHVARTERLGAMGALGSFGGMFDLSSLHLKEPVLVSGTDGVGTKLLLAIEADKHDTIGIDCVAMCVNDILAQGAEPLFFLDYIATGKTDPVKMEQIVKGVADGCEQAGAALIGGETAEMPDMYGSEDYDLAGFTVGAVEKQKLITEGAVKEGDTLIGIPSSGIHSNGYSLVRKIFFKDNELTLDAEISELDVPLVEELLKPTRIYVKPVLEVLKEIDVHGITHVTGGGFVENLPRMLTNDLAVKVELGSWPVLPIFDVMKKYGQLNEMEMYEIFNMGIGMVLAVAKADVERTLEVLVQNGEAAYVIGEVTTRENDAVIFTGGTKG
>NZ_CP013287|353198:361484|359140_359386_-|WP_003722248.1|DBSCAN-SWA
MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFMELKVAKSDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003729811.1|353198_353765_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	9.7e-27	39.1
WP_003729812.1|353761_354811_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.2e-63	43.8
WP_003722245.1|354829_356257_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_014930521.1|356241_358461_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.7e-159	41.1
WP_003722247.1|358453_359137_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003722248.1|359140_359386_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003729813.1|359397_360111_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.4e-41	37.8
WP_003729814.1|360191_361484_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP013287|1018606:1026434|DBSCAN-SWA
ATTAACTATTACTGATTTTCAGCCCTACTTGCGCTGGTGTTTCTCCGCTTCTAAGGCGCTCTGCAATCTGATCTAGTTTCCGGAGACGATGATTAATACCTGACTTACTTACTTGACCTGTTGTTAGCATTTCGCCTAGCTCTTTTAAAGTAACATCTTCATTAGCTATACGAAGCGCTGCAATCTCACGCAGTCGTTCTGGTAAAGCTTCTAGTCCAACGGTTGATTGGATATACTTGATATTATCAATTTGTCTGACAGCCGCATTAATCGTTTTGTTGAGATTCGCTGTTTCGCAGTTTACTAGCCTGTTCACCGAATTTCGCATATCTCGCATAATCCGAACATCTTCAAAATGAAGAAGCGCGCTAGTTGCTCCGATAATACTCAAGAATTCCGTGATTTTTTCCGCTTCTTTCAAATAGGTAATAAAACCATTTTTCCGTTCAAGCGTTCGCGCATTGAGATCGAATTGGTTCATCAAAGCGCAAATCGCCTCATTGTGCTCCTCATAAACAGAGAAAATTTCTAAATGATAGGAAGAAGTTTCTGGGTTATTAACTGACCCACTTGCCAAAAAGGCTCCACGTAAATAAGCACGTTTGGCGCTCCTCTTCTTAACAAATCCCCTATCAATCGATTTCGTAAACGTCATCGGCGGCTCTAGTATCCGCAAATCTTCCAAAATCCCTCGCGTACCAGACTTCAAGCGAACGATATATACATTATTTTTTTTCAGTTTCATTTTTCGGCGTACAAGAAGTTCTATTGGCACTTCATATAAGTCTTTCAATAATTGATACATTCGTCTAGCTATAGCGGCATTCTCTGTTTGGACATCCATGATGACTAATTGACTCGAAAACGAGATTGCGCCATTCATTCGAATAAAAGCTGCGAGTTCCACTTTTGCATCGCTATCACTTACGTCCATATGGGTTAATTCTTTCTTGGTTTCCGATGCAAATGACATGGCTTACTCACTCCTTTTCATTAGTTTGGTCAGGTAACATCGCTAAAAGCGCATCCGCCACCTTTTCAGCAGCATGGCGCACAAGTCCATCCTCTGTAGAAAGAAAATCTTGATAAATGGCTTCTACGCCAAGCTCTTCCATTCCTTTGGCATTATGCTCTACTTGCGCAACATCCTCTGGGAATAAAAGTTCTTTCGGAACAGTCGTCGTATTAATTAATGTTTTATCTATAAAAGATTTTCCCACATGCTCATGGATAACTTTAATATGATCCGCATCTGAGAAAAAGTCGGTTTCGCCAATTTGCGTTAAAATGTTCGTAATGTATACTTTCGGAGCCTTGCTTGCTATAATTTCATCGGCTAATTCCGTAAGTAATAGATTTGGTAAAATACTTGTGTATAAACTTCCTGGACCAATAACAATCAAATCAGCCTCTTTTACAGCTTCCACTGCGGTCGGATATGGTTTAACATTTTCTGGTTCGATATAAACACGATTAATATGCTTTCCTTGTAACGGGATAAGTGACTCGCCGTGCACGATAGAACCATCTTCCATTTCAGCATTTAAGATAAGCGGTTGGTCCGTTGCTGGGATGACTTTGCCGCGGATTTTAAGCACTGTTGCCAGAACATTAATGGCATCGACATAGCTATCATTCAACTGCGATAAAGCTGTTAAAATCAAATTCCCAATAACATGCCCCGATAAATCACCATCTACCGCAAAACGATATTGGAACAAATCGACAACACGTGGATCAACATTGGATAAAGCTAGCATGACATTACGAATATCCCCTGGTGGGAGTACATCCATTTGCTCACGAATTTTACCAGAACTACCACCATCATCCGCTACGGTCACAATGGCCGTTAAATGAATATCCTTCTTTTTAAGACCTTTCAAAATAACAGGAAGGCCTGTTCCACCACCGATAACTACTACTCTAGGTTTCGTTTCCTTTTTCATATTAACGACCCTTTCTACGTTTCATATCTCGGTGTGAAATCGTTGTCTCATATTTTTGTTGGATTGCCTTACCGACAAACTCCGTCAAGGCTACAGAACGATGCTGTCCTCCTGTACACCCAATAGCAATAACTAATTGTGTCTTCCCTTCTCGTTTGTAAAAAGGAAGTGTAAACATTAATAAATCTACTAACTTATCTAAAAAGGTCTGCGTTTCTGGCCATTTCATCACATATTCATACACATCTTCATCAAGCCCTGTCAAAGGACGCATTTTGTCGATATAATGTGGATTCGGTAAGAAGCGTACATCAAACACTAAATCAGCATCAATCGGAATTCCATATTTGAAACCGAACGACATCAATTGCACATTAAATACATCTTTATCTTCAGTTTGGAATTCATTATTAATTCGCTCGCGTAACTCACGTGGCGCCATATTCGACGTATTAATAACTAACTGCGAACGGCCTTTTAAATCACTAAGCAGTTCACGCTCTGCATTAATCCCGTCAAGTACAGAACCGTTTGGCTCTAGTGGATGGTGGCGGCGCGTCTCTTTATAACGCGATACAAGCACCTTATCATCTGCCTCTAAAAAGAGAATTTTCGTTGTTATAAAATTGGTATTATCTAACTCATCGAGCGCCGGTTCAATCGAATCGAAAAACTCTCGTCCGCGAAGGTCCATTACGAGCGCGATTTTATCCATTTTGTCGCTTTCTTTCATTAACTCCCAGAATTTCGGAAGTAAACTTGGTGGTAAATTATCTACACAAAAATAACCGAGATCTTCTAAAGACTGCATTGCAACTGTTTTTCCTGCCCCAGACATCCCAGTAATGATTACTAATTTTAATTGTTTAGAAGTCATATCTGTCTCATCCTTTCGCACAAATAATATCTACCTTCCATTTTAGCACACTTCACACTAGAAAATCCCGGAAAAGTCTCTAAATAGAGTTTCCGGGATTTTTCTTTTTAAGCTTCGATATGTTGCATCAAATCAGCTTTTACTTTTTCTAATTTTGCGGTACTTTCTTCCTTACTTTCACCGCGAATACTAAAGTAGAATTTGATTTTCGGCTCTGTGCCTGATGGACGTAAACAGAACCATGAACCATCTTCAAAATAGCATTTAATAACATCCGCTGTTGGCAAATGGATTGCTTCGGTTTTTCCAGTCGCAACCCAAGTTGTTTCGCTTCTTAAATAATCTTCCACACGTTCCACAAGGAATCCACCCATACTTGTCGGCAGTTGTTCGCGGAAACCACTTGTAATTTCTTTGATACGCTGAGAACCGTCTTTACCACTTAAAGTTAAGGAAACTAGATCTTCGTTGTAATAACCAAACTCATCATAAATTTGATCTAAATCTTCTAGTAAGGTTCTGCCTTCTACTTTGCTAACGAGTGCAACTTCCGCAATTGCAAGAACCGCTTGAATCGCATCTTTATCACGCGTAAATGGCTTAACCATATAGCCGTTACTTTCTTCATAACCAAATTCAAACGTATGCTTACCAGTTTCTTCAAAATGTTTGATTTGCTCTGCGATAAATTTAAAGCCAGTTAATACTTCGATCATTTCCGCGCCATAATGCTTCGCGATTTCCGTTCCAAGATTACTTGTTACAATGGATTTTAATACCGCCGCATTAGCTGGCAATTCATTTTGCGCTTTCTTTTGTTTTAATAAATAATGTAAAATAATCGCGCCAATTTGGTTTCCAGATAACACTTCATATTCGCCGTCAAGATTACGAACCGCCACGCCTAAACGGTCAGCATCCGGATCTGTTCCGACTAAAATGTCGCCACCAAACTTCTTACCATATTCAATCGCCAGTAAAAAGGCTTCGCGATTTTCCGGATTAGGCGATTTTACCGTCCCAAAATCAGGATCATTCACGAATTGCTCGTCTACCTTAACAATATTTGTAAAGCCAACACTTTCAAGCGCTGGAACGCCAAGAATTCCACCAGTACCATGGAGCGGCGTGAAAACAATTTTCAAATCCTCCCCGTGTTCTTGAACAAGCTCCTTATTAACAATGACCTCTTTTAATTTTTTCAAATATGGACGGTCTACTTTTTCACTAATTACCTCTAGCAAACCATTTTCGATTAATACTTCTTGGTTCGCTACTTCTACAGAAAAAATATCTTCTACCGCGTTTATGTAATCAATTACGGCACTTGCGCCAGTCGGAGGCATTTGTCCACCATCTTCGCCGTAAATTTTGTAGCCGTTATATTCTGGCGGATTATGACTAGCTGTAATAACAATCCCACCAAATGCATTTAAATGACGCACGGCAAAAGAAAGTTCCGGTGTTGGTCGAAGCGCATCAAAAACATAGCTTTTCACACCATGATGCCCTAAAACTGCCGCCGATTCAAAAGCAAATTCACGCGACATATGACGAGGATCATACGCAATAACTATCCCACGTTTTTTAGCCTCTTCCCCGTTCTCCGCCACAAATTGCGCTAAACCAAGAGAAGCTTTACGAATAGTATAGATATTCATACGGTTCGTTCCAACGCCTAATACTCCGCGCATTCCAGCCGTTCCAAATTCCATATTACGATAAAAACTATCTTCCAGTTCTTTTTCATTAGCTTCCATATTCGTTAACTGTTTTCGTAATGCGCTATCTAATTTGTCATTAGCAACCCATTTTTGATATTCTTCTTGCCAATTCATTCTCTACACTCCTTCATTCAAAATTTATCAGCTCTCCGCAGTGAAACGAAAAGCCGTCCTAGATGTGAAAGGTTTTTCTGGTCGCAGTACAATATCTCCAAACCCATCCTGATTTATCGCATCTACCAAACCTTGCGTCTCCATCGTTATACCAGCATATTTTGGCACTGCCCGCCCGTCTATCTCGAATGTACTATCCAAACTATTCGCTGTATATACTAATACGGAGTCCGATTCCGTTTCCATTTCCAAGCGCCGTCCTGACTGTGGATCAAATAAAACTGCATCCGGACGACCATTTTCGTGTTTTAAAATAAATGCATGATCTAGTCCCGCACCAACTAATTTTATTTGCTGGTCCTGACTTTGCGTAATCTCCGCTACTTCACGACCTGCACGCAAATCAAAAATAGTATTTTCCACTGAACGTTTTTCACCTATTGGAATAGACTCCCCATCTATAGGCAGGAATCTATCGCTATTAATCCAGAGCTGATGCTGTAAAACTGTCGAACCAGCCTCTCCGCTCAAATTAAAATAAATATGATTGCTTGGATTATAAATAGTCGGCTGGTCGCTTTTTGCTTCATAATCAATTAGCCATTCATTTTTATTATTGAAAGTATAAGTCATTCTAGCATTGATATTCCCCGGATAGCCATTTTCCCCGTCAGCCCAGCAATAGTCAAAAGTCATTACAATTTGATCAAGCTCTTTTTCCACAGTTACATTCCAAATCTTCTTACTAAAATTAAGTTTGCCTCCATGCCGGTGGTTAGCCCCTTCATTTTGAGTCAGTTGGAACTGTTTCCCGTCTAGCTTAAATTGCCCATTACTAATACGACCAGCAACTGGACCAAGTGTCGCACCAAAGTATGGCGAATGTGCTAAATAATCATCTAGATTCGTAAAACCAAGACTAATATTCGCCAAATTGCCAAATTTATCTTTCGTTTCTAGGGAAGTGACAATCGCTCCGTAATTTAATACGCTCATGCGCATACCATGATCATTTACCATCGTCCATTGCCAGACCGTTTTCCCTTCAAATTCACCAAATTGTTCCTGGATTACTTCGATGAAAACCACTTTCCTTCATAGTTATTAATAGCCATTTGGATGAGCTACGTGCCATTTCCAAGCAGTTGCAATAATATCTTTTACATCTGTATAAGTCGGCTCCCAACCAAGAATTTCACGCGCTTTATCACTAGAAGCAATTAATGTTCCAGGATCTCCTGCACGGCGTGGTACAACTTCAGCTGGAATTTCTTTACCTGTTACACTACGAGCTGCTTCAAGCATTTCTTTCACTGAAAAACCGTTACTGCTACCAAGGTTGAAAATATTACTTTCCCCGCCATTCTTCAAGTATTCTAGCGCTTTAATATGCGCATCAATTAAATCTTCTACTTGTACATAATCACGAATACAAGTGCCATCAGGCGTATTGTAGTCATCACCGTAAATCGCTAATTTTTCTCGTTGACCAAGCGCAACTTGTAAAATAATTGGAACTAAGTGCGATTCTGGTTTGTGATCTTCCCCAATCGAGCCATCCGCTTTGGCACCAGCAACATTAAAATACCGGAGTGCAACATATTTCATATCATACGCTTTATCGCACCATTTCATCATTTTTTCCATAATTAGCTTCGTTTCGCCGTAAGTACTTTCCGGATTTGTTGGCATATCTTCCGTAATCGGTACTCGTTCTGGCTCACCATATGTTGCAGCGCTAGAAGAAAAGACAATATGCTTCACACCAAATTGCTCCATCACTTCTAAAACAATTTGCGTACCATAAACATTATTATTTAAATAAACAAGCGGCACTTCCATTGATTCTCCCACAAGTGAACTAGCAGCAAAATGAATCACACCGTCTACTGTTTCTTTTTCAAAAACCGAACTTAAAAATGCCTTATCACGAATATCTCCTTCATAAAATTTCGCCTTTTTATGAATAGATTCTTTATGTCCTGTTCTTAAATTGTCAATAACTACTACTTCATATCCGCGAGTAATTAACTCATCTACTGCATGCGAACCGATATAGCCAGCACCACCAAGTACAACAATACTCATTATTATCTCTCTCCTAACAATAGTCTTTGTCTTCCATTTTACACTACTCAAGTCTATATAGTCACGCAAAAATGGGTCTAAGATAAATAATCCTAGACCCATTTGCACTTTTTACTATTATTTAGCTGCTTCAGCTTCTAATGACTCTTTTAATTCTTCTACATATTTTTGAGTGTTTTGTCCAGCAAGTCCGCCATCGCCTGTTGCTGTTACAATTTGGCGTAAGCTTTTCGCACGAACATCACCTGCTGCAAAAATACCAGGAAGGTTTGTACGCATTTCCTCATCTGTTACGATATAGCCCTCATCGTCTGTAATACCTAGATTTAAGAATGCTTTCGTAAGTGGCACAAGACCAACATAAATGAAAACACCATCCACTGGCATAATAGATTCTGAACCATCCACTGTGGAAACAATTTTTGCTCCAGTTACTTTTTTGCCATCGCCAACAATTTCTTCTACGGTACTATTCCAAATGAAATCAACTTTTTCATCTTTGAAAGCACGATCTTGTAAAATTTGTTGTGCGCGCAATTTATCACGACGGTGTACTATCGTTACTTTATCTGCATAACGAGTCAAATAAGTTCCTTCTTCAACTGCAGAGTCTCCGCCGCCAACCACGATTAATTCGCGATTTTTGAAGAACGCTCCATCACAAACAGCACAATAAGAAACGCCTCGTCCACTAAGCTCTTCTTCGCCAGCTGCACCAAGTTTGCGGTGTTCAGCACCAGTCGCAATAATAATCGCCCGAGCTTTATAGGTTTTCGATCCAGCCGTTACAGTTTTAAATTCTTTGCCATCAACGACTTCTTTAATATCGCCATAAGCATACTCAGCACCGAATTGTTTCGCACCACTAAGCATCTTGTCGGATAAATCTGGTCCTAAAATGCTATCAAATCCAGGGTAATTTTCTACCTCTGCCGTATTAACCATTTGTCCGCCGGGTACTCCGCGTTCAATCATTAACGTATCTAAATCTGCACGGGAAGTATATAAAGCAGCTGTCATTCCAGCTGGTCCCGCTCCAATAATAATCACATCATAAATTTTTTCTTCACTAGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP013287|1018606:1026434|1019585_1020554_-|WP_003729204.1|DBSCAN-SWA
MKKETKPRVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALSQLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINRVYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEIIASKAPKVYITNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNAKGMEELGVEAIYQDFLSTEDGLVRHAAEKVADALLAMLPDQTNEKE
>NZ_CP013287|1018606:1026434|1023296_1024358_-|WP_003729207.1|DBSCAN-SWA
MVFIEVIQEQFGEFEGKTVWQWTMVNDHGMRMSVLNYGAIVTSLETKDKFGNLANISLGFTNLDDYLAHSPYFGATLGPVAGRISNGQFKLDGKQFQLTQNEGANHRHGGKLNFSKKIWNVTVEKELDQIVMTFDYCWADGENGYPGNINARMTYTFNNKNEWLIDYEAKSDQPTIYNPSNHIYFNLSGEAGSTVLQHQLWINSDRFLPIDGESIPIGEKRSVENTIFDLRAGREVAEITQSQDQQIKLVGAGLDHAFILKHENGRPDAVLFDPQSGRRLEMETESDSVLVYTANSLDSTFEIDGRAVPKYAGITMETQGLVDAINQDGFGDIVLRPEKPFTSRTAFRFTAES
>NZ_CP013287|1018606:1026434|1020555_1021431_-|WP_003729205.1|DBSCAN-SWA
MTSKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQTEDKDVFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
>NZ_CP013287|1018606:1026434|1025474_1026434_-|WP_003729209.1|DBSCAN-SWA
MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQMVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKIVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNTQKYVEELKESLEAEAAK
>NZ_CP013287|1018606:1026434|1021538_1023269_-|WP_003729206.1|DBSCAN-SWA
MNWQEEYQKWVANDKLDSALRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGVGTNRMNIYTIRKASLGLAQFVAENGEEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGEDGGQMPPTGASAVIDYINAVEDIFSVEVANQEVLIENGLLEVISEKVDRPYLKKLKEVIVNKELVQEHGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDGEYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGRTLLEDLDQIYDEFGYYNEDLVSLTLSGKDGSQRIKEITSGFREQLPTSMGGFLVERVEDYLRSETTWVATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESTAKLEKVKADLMQHIEA
>NZ_CP013287|1018606:1026434|1024373_1025357_-|WP_003729208.1|DBSCAN-SWA
MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHKKAKFYEGDIRDKAFLSSVFEKETVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIKALEYLKNGGESNIFNLGSSNGFSVKEMLEAARSVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVAHPNGY
>NZ_CP013287|1018606:1026434|1018606_1019578_-|WP_003722604.1|DBSCAN-SWA
MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSSQLVIMDVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRILEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEAICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRNSVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTLKELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722604.1|1018606_1019578_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4
WP_003729204.1|1019585_1020554_-	YvcK family protein	A1IMD5	Streptococcus_phage	3.0e-68	43.3
WP_003729205.1|1020555_1021431_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003729206.1|1021538_1023269_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	8.6e-175	53.3
WP_003729207.1|1023296_1024358_-	galactose mutarotase	NA	NA	NA	NA
WP_003729208.1|1024373_1025357_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.8e-52	38.4
WP_003729209.1|1025474_1026434_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.4e-88	53.7

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP013287|1305491:1315523|DBSCAN-SWA
TTTATTTATCTAGCTTTAATTTAGCAAGCGCTTCAGCCATTGGATTGTTAAATGGCTCATCTTCTTGTTTGTTTTGTTTTTTCATAAATTTAGCTACATCTGTTTTAGATACGTTTTTGTTTTTCTGTTTGTCACGCCGCTGTTGGAAGGCAGATAGTTTCTCCCGGTGTCCACAAACACATACAAAAATTTGTTTATCACCTTCGCCGCGCATTTCCATTCGTTTATGGCAATTAGGGCAACGAGCATTCGTCATTCTTGAAACAGATTCACGATGACCGCATTCACGGTCCTGACAAACTAGCATCGTACCACGTTTGCCTTTCACTTTTAGCATCGGCTTTCTGCAGTCTGGGCATTTTTGTGAAGTAATGTTATCGTGACGGAATTTTTTATCGTTTTGTTTAATTTCAGTTACTGCTTTTTTTGCATAGTCGCGCATTTCTGTAGTGAATTTACGATAATCTAGTTCGCCTTTTGCGATTTTAGATAATTTTTGTTCCCAACGCGCCGTTAGTTCTGGGGATTTCAAATCTTCGGGGACTAATTCTAGCAATTGGCGTCCTTTTGAAGTAATTTGAATGTCCTTGCCTTGTTTTTCTAGGGAGAAACTATTGAAAAGTTTTTCAATGATGTCCGCACGAGTTGCAACGGTTCCAAGTCCACCTGTCTCACCTAGTGTTTTGGCGAGTGCCTTGCTTGTTGTTTCCATGTATTTGGACGGGTTTTCCATGGCTGAAAGTAAGGTTGCTTCATTGAATCTTGCTGGCGGTTTTGTTTTCCCTGTCTCTAAATTGATTCGTTTAACTGGGATTGTGTCGCCTTTTTTCATTTTAGTTAACTGATCTGGTTCGCGTGACTCTCCGTAAATACTTTTCCAACCAAGTGATTTGACAACTTTACCTTTTAAAGTGAATTCTTCTTGGCCAATTTTGGCTTTAACAGAGGTTTCTTCATAAATATATGGGTCTGAAAGCACTGCTAAAAAGCGTTTGACAACAAGGTCATAAATTTTCCGTTCTTTATCGCTTAAATCTCCGAGAGAAACGGGTTGCTCGGTCGGAATAATTGCGTGATGGTCGCTCACTTTGCTGTTATCTACAAATGATTTGTTCGCTTTGATTGGTTTTCCGCTGATTTGACGAGCAGCTTTTGCATTTTCACCCACACCGCAGGCCGCTAAACGTTCTTTTAGTGTTGGGACAATGTCCGTTGAAATAAAGCGCGAATCTGTTCGTGGATACGTTAGTACTTTGTGGCGCTCGTATAGTGTTTGCATAATATTCAGCGTTTCTTTCGCCGAAAAATCATATCTATTATTCGCATCGCGTTGTAATTCAGTTAAATCATATAAACCTGGTGAGAAATTTTTCTTTTCTTTCATAGAAACGTCTGTGATTACCGCATTTTCCCCTTGTAAAGACTTTACTAGTTTTTCTGCTAAAGCTTTATCAAAAGTTTGCCCATTGTTCCACGTGAAACTTTCTTGTTCGGTTAGCGCGGTAATTCCATAGTATTCACGCGGTTTAAAATTACGAATTTCTTCCTCACGATGTTGAATCATTGCAAGCGTTGGCGTTTGCACTCGGCCACAGGAAAGTTGTGCGTTATATTTCGTTGTCAACGCACGCGTAGCATTGATTCCTACCACCCAGTCAGCTTCAGAACGAGCGACTGCAGAGTGATATAGATTTTCATAAGCTTTCCCTGGTTTTAAGTGTTCGAAGCCTTCACGTATCGCTTTATCCGTTACAGAGGAGATCCATAGTCTTTTTAGAGGCTTCTTGATTTTCGCATAATCAATAATCCAGCGGGCTACAAGTTCTCCTTCTCTACCTGCATCTGTTGCAATAACGATCGTGGTTATATCTGTACGGTTCATTAACTTCTTAACCGTTTCATATCGCTTTCTCGTTTGCTTGATTGGTTCTAGCTTCATTTTCTCTGGAAGCATTGGTAAATCTTCCATATTCCAGTTTTTATACTTCGAATCGTAGCGCTCAGGGTCAGCTAGTGTTACAAGGTGTCCAAGCGCCCAAGTTACTACATATTTCCCACCTTCTAAATAGCCGTTCTTACCTTGTTTAGCCCCGAGTACCCGGCCGATATCTTTACCGACAGACGGTTTCTCTGCCAGTACTAATGTTTTTGTCATCTGTCAAAACCCTCTCTTCTATTTTATTTCGATGCCTCTTGTTGCAGTACAGCCAAGAATTCTGCACCGTATTTATCGCGTTTCATCGCGCCAATGCCTTTGACTTCAAGCAACGCATCTTCCGTTTGCGGCATATATGCACACATTTCACGTAACGTTTCATCTGAAAAAATGATATATGGCGGCACCTTGTGTTTCGCTGCCAGTTCCCGCCGCACTTCCCGCAATTTCTCGAAAAGGTCACTATTTACATCTATTTTAACTTTTTCAGCCCGTTTCGCTTGTTTTCTTTCCACTTTTAGCTCGCCTCGTAAAACCGAAACGGCTCTATCCGTCAGTTTTAAGGAAGGGAATTGACTATCAGTTGGTTGTAAATATTTTTCTGCTGTAAGGTAATCAATTAGTTGTAACACATCTTTTTGGGAAGCATCTTTCATCAATCCATAGGTACTGAGTTCGTCAAAGCGCCAATCTTTCACTTTCTGGTCAGCAGAACCTGTCAAAACCTTGGCAATTAATACTTTCCCGAAACGCTCACCCATTCTTTTTATACAAGAAAAAACTTGTTGCGCTAAAATTGTAACATCCGTTGCTTCCCTAGTATCTAAGCAATTACTACATTTCTCGCAGTTTTCCTCGTCGTCTCCAAAATACTGCACGATGTATTTCTGTAAACAAATTTCCGTATAACCATACCCTGTCATTTGGCGTAGCTTAGCGAACTCATTTTGTTTGCGCTCATCGTCCATTTCGGATTGTTCAATTAAAAACTGCTGGATGCGGCTATCTTGCGGGGAAAACAACAAGATACAATCACTTGGAACCCCGTCTCGCCCAGCACGACCCGCCTCTTGATAGTACGCTTCAATATTGCGCGGAATATTATAATGAATAACAAAACGCACATTAGATTTATTAATTCCCATTCCAAACGCATTCGTCGCCACAATCACTCGAATATCATCATATAGAAACTTCTCTTGCCAGTCTTTCCGTGCTAAATCGGTCATTCCGCCATGATACATACCAGATTCAACGCCTTTTTTTAGCAAGAAACTGTGCAGCCGCTCTACTTCTTTCCGAGTCGAAGCATAAATAATTCCGGATTCCGTTACATTTTTTGTTAAATAATCAATCAAATACTTATCTTTATCTTGCCCTTTCACTACTTGAAAAGCCAAATTATCTCTGGAAAATCCAGTTTTAACGACTGAATCTGCTCCTATTTTTAGCAATCGGCAAATATCGTCTGAAACAGCCTGCGTTGCTGTAGCAGTAAGCGCGATAACGAGCGGCCGTCTGGTCATTTTATCCAAACTATCGCACAGCGTCAGGTAGCTAGGACGAAAATCATGACCCCACTGCGAAATACAGTGCGCCTCATCTATCGCAAATAATGAAATAGGTACCTGCTCAATTAAACGCTGAAAACCTGGCGTTTCAATGCGTTCTGGAGCAATGTAAAGCATCTTTAACTCACCTGAAAATGCAGCATCCAGCCGAATATCTATTTCTCTATTAGTCAGTGTACTATTAATAAAAGTAGCTGCAATCCCCTCTGAGACTAAAGCATCTACTTGATCCTTCATAAGTGAAATTAGTGGAGAAACAACAATGGTCAAACCGTCAAAAAGAAGTGCTGGGATTTGGTAACAAAGTGACTTCCCGCCACCCGTTGGCATGATTGCTAGCGTATCTTCTCCCGCGCAAAGTTTCGAAATGACATCAACTTGTCCATTCCGAAAATCTTGATAACCAAAGTTTTGCTGTAAAATAGCTCTTGCTTGCTCTATCATTATCTTTTTTCACGCCTCCTCTATAGAAACAGTATAGCGGTTTTATGACTTTAATTGAAGCTTTTTGGAGAAATTCGTGTTTTCTCGCAGCTTTCTTATTTTTATAGTAGAAATAAAAAAGCAGAAACCTCTTTTGGAAGAGATTCCTGCTTTTTCGACCTTAAGAAATGCTATAGTTTGGTGCTTCTTTTGTAATTTGAATATCATGTGGGTGGCTTTCACGAAGTCCAGCGCCAGTCATACGAACGAACGCCGCTTCTTCACGAAGATGTCTTAAATCAGGAGAGCCAGTGTAACCCATACCTGAACGAATACCGCCAACTAATTGGAAGATAATATCAGCAATGGAGCCTTTGTAAGGAACGCGACCTTCAATACCTTCAGGAACCAGTTTTTTCGCATCTGCTTGGAAATAACGATCTTTTGAACCGTGCTCCATCGCTGCCAAACTACCCATACCACGGTAAGTTTTGAATTGACGACCTTGGAAAATTTCTGTTTCACCAGGGCTTTCGTCTGTTCCAGCAAGCATACTTCCTAGCATAACCGCATTTCCTCCAGCAGCTAGAGCTTTCACGATATCACCGGAGTATTTAATCCCGCCGTCTGCGATAATTGTTTTACCAAATTCACGCGCAACAGTTGCACAATCGTAAATCGCTGTGATTTGAGGAACCCCAACACCTGCAACAACACGTGTCGTACAGATGGAACCAGGACCAATCCCAACTTTGACGATATCAACACCAACTTCAAAAAGAGCACGTGCTCCTTCAGCTGTTGCAACGTTTCCGGCAACAATTACTACATCTTTGAAAGTTTGGCGAATTTCGGAAATTTTATTAATAACTCCCGCTGAATGTCCGTGCGCAGTATCAATAACAATTGCATCAACACCCGCCTCGATTAATTTCTCTACACGTACAAAAGTATCATTCGTAATTCCAACAGCTGCTGCGGCAAGTAGTCTACCATGTTTGTCTTTAGCAGAGTTCGGGAATTCAATTACTTTTTCAATATCTTTAATAGTGATAAGCCCTTTTAGAATGCCTGCTTCATCAACAAGTGGCAATTTTTCGATGCGGTGTTTTTGCAGAATCTGCTCAGCTTGTTTTAGCGTAGTTCCAACTGGCGCTGTCACTAGGTTTTCCTTTGTCATAACATCTTTAATTACTGTAGAATAATCGGAAATAAAACGTAAATCGCGGTTAGTTAAAATCCCAACTAGTTTGCGCTCTTTCTCGTTGTTCACGATTGGAACACCTGAGATACGATACTTACCCATCAAATGCTCTGCAGCAAAAACTTGGTGATCTGGAGTCAGATAAAATGGATCAATAATAACGCCACTTTCAGAGCGTTTCACCTTCTCGATTTCTTCCGCTTGTTGTTCAATACTCATATTCTTATGAACAACACCGATTCCGCCTTGGCGCGCAATTGCAATTGCCATTTTGGCTTCTGTAATTGTGTCCATTCCGGCACTCCAAATTGGTACATTTAATTTGAGTGATGGAGCCATTTCTACACTTAAATCTACATCATTTGGTAATACGTCCGATTTCGCTGGAACAAGTAAAACATCATCAAATGTTAAGCCTTCTTTTGCAAATTTTGTTTCCCACATGGGTCGCAAACACTCCTTTTTTATTGGTACTCGCTTTTTTATATAGAAAAAACGCATCATCTTATCCTTATTTTCATAAAGAAAAAATGGTGGAAAATATCCACATCATGCGACTTGTCTTCTATAATCATGCTGAAATAGCCAATGTATATTTTTAGTTATTGAATATGATGTTACAAGAAGCTTGGAGCTATGTCAAGAAGGTTTTCCGTTGTTGTTTTATTCAGAAAATATAGTAAAAAATGTTTCACGTGAAACATTTAAAAAAGCCGCCTAAGATTGTTATCTTAAACGACTTCGCTATTTATTAATTTGTTGTATAACTTCAAATTTTCTTCATCGAAACAAACAAAGCGTATTTCTTTAATACTTGTGTCATACTCTTCTTCCGCCCATTTACGAACGGTATAAAGCGCTACTTCTGCTGCTAGTTTTTTAGGAAAGCCATATACACCAGTAGAAATATTAGGAAAAGCAATCGAAGTTAAGTCTTTTCCAGCCGCTAAATCTAGCGCTTTCCAATAACAAGATGCCAGTTTATTCGCTTCTTGATGCTCTCCGTCTTTCCAAATCGGACCTACAGCATGAATAATGTAACTTGCTTGTAAATCGCCGGCAGACGTAATGACCGCCTCACCCGCAGGACAAGTCCCAATGCGATTAATAACCTCTTGACACTCTTTTAATAAATCTGGACCCGCCGCTTGATGGATAGCACCATCCACTCCGCCGCCACCTAAAAGTCCAGGGTTAGCAGCATTTACAATGACATCTACGTCTTGTTCCGTAATATCACCTTTTACAACTGTTATCTCCATACCATCACCTCTTTTCTTCATTCTAATTTATTTTGAAAGTGATTTCCAGCAAGTCGATTATCTTCGCTTACTAGTTGCATAACTGTAATTGCCTTCATAAACGGTTAATTGTTTATTCTCCAGCCAAATGACTTTAGAGCATAGCTGATCAATAAAATAGCGATCGTGCGATACAGTGATAATTGTGCCGCTAAATGCCCGAATTGCTTCTTCTAAAATTTCACGCGAGGCGATATCTAAATGGTTAGTCGGCTCATCAAGTATCAGCGTATTCACTGGCATATTAATAAATTGCGCCAACCTAAGTCGCATACGTTCTCCGCCGCTAATATTCCCTACTTTTCGGAAAACCATTTCTCCATAAAACATGAAGCCTGCTAGCATTTGTCGTGCTTCTCCTTCTGTCACAGCAACCTTATCCCGAAACGCATCCAGTACAGTCAGCTCTTCATTCAGCTCTTCCATTTGCTGAGAAAGCGACGCAATTTTCACACTCGCGCCCACCTTAATCATGCCACCATCAGGAACAACTTTCCCTTCCATTATTTTAAGCAAAGTAGATTTGCCGGCGCCGTTTTCACCGATAATCGCTACTCGTTCTCCTTGCCTAATTTGCAAAGAAACATCTTGTACGATTGCTTTTTCGCTAAATGACTTGCTTAAGTTTTCCATAACCACAACTTCTTGTCCACTTCGACCGGCTTCATCGAATTGTAATTGCATTTGTTTTTGCGTTAACACTGGACGCTTTACTTTTTCCATCCGTTCTAATGCGCGTTCCATGTTTTTCGCCCTTCGGAACATGGCATCATTTGGCGGATTGGCTTGCATTGCCCACTGGCGCAATCGTTTGATGGCTTGCTGCATCTTTTTGATTTTCTTTTGTTGGTCTTTGTAATCTTGGAATTCCCGCAATAGCCGTTCTTCTCGTTCTTTCAAATATCCAGAAAAATTCGTATGATAAACTATTAATTCGCGGTTCTCAAGCTCCACCATTTTCTCGACTACTTCATCTAAAAAGTAGCGATCATGAGATACAACTAATACGGTTCCCGAATAATGTTGTAAAAACGCGGTCAACCATTCTACCGCCATCAAATCCAAGTGGTTCGTCGGTTCATCTAAGAGTAATAAATCTGTTTTCTGTAATAATAAATGCGCTAATGCAGCCTTCGTCTTCTCACCACCACTCAAGTCTCCCCATCGTTGCGACAGTAGCAATCCAATACCAAGCCCATTCACCACTTTATTCAAATTGGCATCCATCTCATAGCCGCCAAGCTCGCCAAATAAAGCCATTTTATCTCCGTAGCGGTTCATTAATTTTTCGCTTGAATTTGTTGCCATTTCCCCTTCTAACGCTCGTAATTCTTTTTCCAGATCCTCTAACTCGCCAAAACTAGTTCGTAAATATTGTTCTACTATTATATTAGGATCCACCGTCGACAATTGTTCTAAAAGCCCAATTTTCGCGCCCTTTTTGCTCGTCACAATCCCGCTATCAACGCCCTCAGTTCCTTTTAAAATCTTCAAAATAGTACTTTTCCCTTCGCCATTACGACCAATTAAACCGACGCGTTCACCTTCTTCTAATTGAAGAGATACTTTCTCTAAAATAATATCTCCGGTAAAACTTTTAACTACATCATTCATTGCTACTATTGTCATTTTATCCTCCATTTATCCAAGGAAGCATGGCAAAATGTTTCACGTGAAACATTTTTAGACAACAAAAAAGCGTCAGACAAGCGCCCGACGCCAATTATAAGTATAATACTAATTTAGCACTATACAAACCGATTGCGTGACTCCATGCTTCTCTCATTTTTTCTAGTTATACAGTTTTTTGGGCAGACTTCGCCAATGTAACTGCAATACCGGAAAAAATTGCACGGACAATATACAAAAATTTAGCTATACTAGTTCGCGCATTCGAAAGAAACATGTCATCTCACCTCTTTTCATTAATACATATAGAATAAGGGATACTGCCCCAAATGTCAATTGTTCTTCCAATCACATGCACGAAACACAGCGTTTCAACTCAGAAACTTATACCATTGATATGAAACACGAACCCAAAGCACCAAAATCTATTTACCAATTAGTCGAAACCGTTTACATTAATAAGGCAAGCAAAACTAAAACAGACTAATCGCACATAATTTTTGGAGGTGCCATAATGGAACATAATAAGTTGAAACCTTTCCCAAAAGATTTTCTATGGGGATCAGCTTCTGCAGCGTACCAAGTAGAAGGTGCCTGGGATGAGGATGGCAAAGGGCCATCTGTATGGGATGAATTTGTTCGTATTCCTGGAACAACATTCAAAGAAACAAACGGAGATGTAGCGGTGGATAATTACCATCGTTATAAAGAAGATGTCGCACTAATGGCTGAACAGGGCCTAAAAGCATATCGTTTCTCTGTCGCATGGAGTCGCGTTATCCCGCATGGTAACGGGGAAGTTAACGAAGCAGGACTTAAATTCTATGATAATTTGATTGATGAACTTCTTTCTTATGGAATTGAGCCAGTCGTTACACTTTACCACTGGGATATTCCGCAAGGGCTTCAAGACGAATATGGTGGATGGGAGTCGCGCAAAGTCGTAGAAGATTTCACTAACTACGCTGCCCTTCTATTCGAACGCTTTAACGGCCGAGTTAAATATTGGGTAACACTTAATGAACAAAACGTATTTATCTCACACGGTTACAAATTAGCGTATCACCCACCTGGCGTTTCTGACGACAAGCGTATGTTTGCGGCAAATCACAATGCGAACTTGGCGAATGCTTCTGCAATTGCTAAATTCCGCGAGCTAGGTACATCCGGAAAAATTGGCCCAAGTTTCGCTTACGGACCAAGTTACTCCATCGATGCCAACCCAGCAAACGTGTTAGCTTCTGAAAACTCCGAAGAATTCAATGCCCATTTCTGGATGGATGTTTACACATGGGGTGAATATCCGACTGCTACTTGGAACTGGCTGGAAGAGCACGGTCTTGCACCGGAAATCTTACCAGGCGATACGGAACTTCTAAAAAAAGGAAAACCTGATTTCATGGGAGTTAACTATTACCGCTCAATGACTCATGCATTTAATGGGAAAGACGGCGTTGGTTCTGGGAAAATGAATACAACTGGCGAAAAAGGCACTTCCGAGGAAACTGGTGTACCGGGGTTATACAAAAACACCAACAACCCTTACTTAGAGAAAACGAATTGGGACTGGGACATTGATCCAACTGGCTTGCGCATTGGCTTACGTAGAATTACTAACCGCTATAAATTACCAATCATGATTACAGAAAATGGTCTTGGTGAGTATGATAGCTTGACGGAAGACCATAAAATCCATGATGAGTACCGAATTGAATACATTCGTGCGCATGCTCTAGCAATCCAAGAAGCAATCACGGACGGCGTAGAGATGCTTGGTTACTGCACTTGGAGCTTCACAGATTTACTAAGTTGGTTAAACGGCTACCAAAAACGTTACGGTTTCGTATATGTAGACCGCGACGAAAACGATGAAAAAGAATTAAAACGCTATAAAAAAGATAGTTTTTACTGGTATAAAAAGACCATCGAAGCAAACGGAGCTAATTTAGTAGAAGAACAGGGCAAATAA

Protein sequences of DBSCAN-SWA_3

>NZ_CP013287|1305491:1315523|1305491_1307645_-|WP_003728632.1|DBSCAN-SWA
MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGHLVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKRYETVKKLMNRTDITTIVIATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKPREYYGITALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKNFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLAACGVGENAKAARQISGKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQLTKMKKGDTIPVKRINLETGKTKPPARFNEATLLSAMENPSKYMETTSKALAKTLGETGGLGTVATRADIIEKLFNSFSLEKQGKDIQITSKGRQLLELVPEDLKSPELTARWEQKLSKIAKGELDYRKFTTEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCRKPMLKVKGKRGTMLVCQDRECGHRESVSRMTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK
>NZ_CP013287|1305491:1315523|1309601_1311068_-|WP_003728634.1|DBSCAN-SWA
MWETKFAKEGLTFDDVLLVPAKSDVLPNDVDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIGVVHKNMSIEQQAEEIEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLRFISDYSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVIEFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVDAIVIDTAHGHSAGVINKISEIRQTFKDVVIVAGNVATAEGARALFEVGVDIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATVAREFGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMLAGTDESPGETEIFQGRQFKTYRGMGSLAAMEHGSKDRYFQADAKKLVPEGIEGRVPYKGSIADIIFQLVGGIRSGMGYTGSPDLRHLREEAAFVRMTGAGLRESHPHDIQITKEAPNYSIS
>NZ_CP013287|1305491:1315523|1311355_1311886_-|WP_003728635.1|DBSCAN-SWA
MEITVVKGDITEQDVDVIVNAANPGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
>NZ_CP013287|1305491:1315523|1311943_1313554_-|WP_003728636.1|DBSCAN-SWA
MTIVAMNDVVKSFTGDIILEKVSLQLEEGERVGLIGRNGEGKSTILKILKGTEGVDSGIVTSKKGAKIGLLEQLSTVDPNIIVEQYLRTSFGELEDLEKELRALEGEMATNSSEKLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGLLLSQRWGDLSGGEKTKAALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHYSGTVLVVSHDRYFLDEVVEKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLRQWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQMQLQFDEAGRSGQEVVVMENLSKSFSEKAIVQDVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDGGMIKVGASVKIASLSQQMEELNEELTVLDAFRDKVAVTEGEARQMLAGFMFYGEMVFRKVGNISGGERMRLRLAQFINMPVNTLILDEPTNHLDIASREILEEAIRAFSGTIITVSHDRYFIDQLCSKVIWLENKQLTVYEGNYSYATSKRR
>NZ_CP013287|1305491:1315523|1307668_1309441_-|WP_003728633.1|DBSCAN-SWA
MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGGKSLCYQIPALLFDGLTIVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDAAFSGELKMLYIAPERIETPGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLDKMTRRPLVIALTATATQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYLIDYLTKNVTESGIIYASTRKEVERLHSFLLKKGVESGMYHGGMTDLARKDWQEKFLYDDIRVIVATNAFGMGINKSNVRFVIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFSPQDSRIQQFLIEQSEMDDERKQNEFAKLRQMTGYGYTEICLQKYIVQYFGDDEENCEKCSNCLDTREATDVTILAQQVFSCIKRMGERFGKVLIAKVLTGSADQKVKDWRFDELSTYGLMKDASQKDVLQLIDYLTAEKYLQPTDSQFPSLKLTDRAVSVLRGELKVERKQAKRAEKVKIDVNSDLFEKLREVRRELAAKHKVPPYIIFSDETLREMCAYMPQTEDALLEVKGIGAMKRDKYGAEFLAVLQQEASK
>NZ_CP013287|1305491:1315523|1313732_1314041_+|WP_077422009.1|DBSCAN-SWA
MGRLRQCNCNTGKNCTDNIQKFSYTSSRIRKKHVISPLFINTYRIRDTAPNVNCSSNHMHETQRFNSETYTIDMKHEPKAPKSIYQLVETVYINKASKTKTD
>NZ_CP013287|1305491:1315523|1314068_1315523_+|WP_003725314.1|DBSCAN-SWA
MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTSGKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVPGLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDHKIHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728632.1|1305491_1307645_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	9.7e-43	33.9
WP_003728633.1|1307668_1309441_-	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	1.1e-79	37.3
WP_003728634.1|1309601_1311068_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.0e-97	39.8
WP_003728635.1|1311355_1311886_-	ADP-ribose-binding protein	A0A0K1L687	Scale_drop_disease_virus	1.7e-28	49.3
WP_003728636.1|1311943_1313554_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.7e-47	29.9
WP_077422009.1|1313732_1314041_+	hypothetical protein	NA	NA	NA	NA
WP_003725314.1|1314068_1315523_+	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.9e-50	30.3