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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013332 Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP013331 Fusobacterium hwasookii ChDC F174 chromosome, complete genome 8 crisprs cas3,WYL,cas14j,cas4,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csm6,cas1,cas2,csa3,DinG,RT,PD-DExK,cas5,cas7,cas8b2,DEDDh 5 3 1 0
NZ_CP013333 Fusobacterium hwasookii ChDC F174 plasmid unnamed2 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP013331
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_1 450727-450821 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_2 491060-491517 TypeV NA
6 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_3 542922-543092 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_4 543153-543250 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_5 550725-550816 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_6 1261754-1262175 TypeIII NA
5 spacers
cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_7 1504102-1504206 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013331_8 1950560-1954493 Unclear NA
59 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP013331_8 8.49|1953759|37|NZ_CP013331|CRISPRCasFinder,CRT 1953759-1953795 37 NZ_CP013331.1 1954494-1954530 0 1.0
NZ_CP013331_8 8.53|1954024|37|NZ_CP013331|CRISPRCasFinder,CRT 1954024-1954060 37 NZ_CP013331.1 1954494-1954530 0 1.0
NZ_CP013331_8 8.54|1954091|37|NZ_CP013331|CRISPRCasFinder,CRT 1954091-1954127 37 NZ_CP013331.1 1954494-1954530 0 1.0
NZ_CP013331_8 8.55|1954158|37|NZ_CP013331|CRISPRCasFinder,CRT 1954158-1954194 37 NZ_CP013331.1 1954494-1954530 0 1.0
NZ_CP013331_8 8.108|1953760|37|NZ_CP013331|PILER-CR 1953760-1953796 37 NZ_CP013331.1 1954494-1954530 0 1.0

1. spacer 8.49|1953759|37|NZ_CP013331|CRISPRCasFinder,CRT matches to position: 1954494-1954530, mismatch: 0, identity: 1.0

aagaggatcttattctacatggctctgcctggtttgc	CRISPR spacer
aagaggatcttattctacatggctctgcctggtttgc	Protospacer
*************************************

2. spacer 8.53|1954024|37|NZ_CP013331|CRISPRCasFinder,CRT matches to position: 1954494-1954530, mismatch: 0, identity: 1.0

aagaggatcttattctacatggctctgcctggtttgc	CRISPR spacer
aagaggatcttattctacatggctctgcctggtttgc	Protospacer
*************************************

3. spacer 8.54|1954091|37|NZ_CP013331|CRISPRCasFinder,CRT matches to position: 1954494-1954530, mismatch: 0, identity: 1.0

aagaggatcttattctacatggctctgcctggtttgc	CRISPR spacer
aagaggatcttattctacatggctctgcctggtttgc	Protospacer
*************************************

4. spacer 8.55|1954158|37|NZ_CP013331|CRISPRCasFinder,CRT matches to position: 1954494-1954530, mismatch: 0, identity: 1.0

aagaggatcttattctacatggctctgcctggtttgc	CRISPR spacer
aagaggatcttattctacatggctctgcctggtttgc	Protospacer
*************************************

5. spacer 8.108|1953760|37|NZ_CP013331|PILER-CR matches to position: 1954494-1954530, mismatch: 0, identity: 1.0

aagaggatcttattctacatggctctgcctggtttgc	CRISPR spacer
aagaggatcttattctacatggctctgcctggtttgc	Protospacer
*************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013331_8 8.52|1953959|35|NZ_CP013331|CRISPRCasFinder,CRT 1953959-1953993 35 KR131710 Fusobacterium phage Funu1, complete genome 24356-24390 0 1.0
NZ_CP013331_8 8.48|1953692|37|NZ_CP013331|CRISPRCasFinder,CRT 1953692-1953728 37 NZ_CP054007 Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed2, complete sequence 2801-2837 9 0.757
NZ_CP013331_8 8.107|1953693|37|NZ_CP013331|PILER-CR 1953693-1953729 37 NZ_CP054007 Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed2, complete sequence 2801-2837 9 0.757

1. spacer 8.52|1953959|35|NZ_CP013331|CRISPRCasFinder,CRT matches to KR131710 (Fusobacterium phage Funu1, complete genome) position: , mismatch: 0, identity: 1.0

gtgttcttagctccagttaccctaattgttatagc	CRISPR spacer
gtgttcttagctccagttaccctaattgttatagc	Protospacer
***********************************

2. spacer 8.48|1953692|37|NZ_CP013331|CRISPRCasFinder,CRT matches to NZ_CP054007 (Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

-tgatatcatacaaatgtgattaaaaaacacaaaaagg	CRISPR spacer
atggaacta-gcaaatgtgattaaaaaatacagaaagt	Protospacer
 **. *..* .*****************.***.**** 

3. spacer 8.107|1953693|37|NZ_CP013331|PILER-CR matches to NZ_CP054007 (Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

-tgatatcatacaaatgtgattaaaaaacacaaaaagg	CRISPR spacer
atggaacta-gcaaatgtgattaaaaaatacagaaagt	Protospacer
 **. *..* .*****************.***.**** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1706164 : 1712249 6 Synechococcus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage