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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009828 Staphylococcus aureus strain MS4 chromosome, complete genome 10 crisprs cas3,DEDDh,DinG,csa3,WYL 8 3 11 1

Results visualization

1. NZ_CP009828
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_1 658079-658186 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_2 774570-774655 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_3 951822-951979 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_4 1070348-1070440 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_5 1154581-1154832 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_6 1229445-1229537 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_7 1437446-1437525 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_8 2202676-2202760 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_9 2357302-2357394 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009828_10 2703193-2703278 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 1154817-1154842 0 1.0
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 1292087-1292112 0 1.0
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 820985-821003 1 0.947
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 830154-830172 1 0.947
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 1292154-1292172 1 0.947
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 2236979-2236997 1 0.947
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 830124-830153 1 0.967
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 1054152-1054181 1 0.967
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 1712606-1712635 1 0.967
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 2703259-2703288 1 0.967
NZ_CP009828_5 5.2|1154663|30|NZ_CP009828|PILER-CR 1154663-1154692 30 NZ_CP009828.1 784047-784076 1 0.967
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 784047-784086 1 0.975
NZ_CP009828_5 5.4|1154785|30|NZ_CP009828|PILER-CR 1154785-1154814 30 NZ_CP009828.1 830066-830095 1 0.967
NZ_CP009828_8 8.1|2202706|25|NZ_CP009828|CRISPRCasFinder 2202706-2202730 25 NZ_CP009828.1 1922086-1922110 1 0.96
NZ_CP009828_8 8.1|2202706|25|NZ_CP009828|CRISPRCasFinder 2202706-2202730 25 NZ_CP009828.1 2202762-2202786 1 0.96
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 784031-784056 1 0.962
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 784087-784112 1 0.962
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 830030-830055 1 0.962
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 1893240-1893265 1 0.962
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 2120301-2120326 1 0.962
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 2237037-2237062 1 0.962
NZ_CP009828_2 2.1|774598|30|NZ_CP009828|CRISPRCasFinder 774598-774627 30 NZ_CP009828.1 815640-815669 2 0.933
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 183693-183711 2 0.895
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 621962-621980 2 0.895
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 931638-931656 2 0.895
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 1150566-1150584 2 0.895
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 1366733-1366751 2 0.895
NZ_CP009828_3 3.2|951929|19|NZ_CP009828|PILER-CR 951929-951947 19 NZ_CP009828.1 1747693-1747711 2 0.895
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 820899-820928 2 0.933
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 886769-886798 2 0.933
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 1150699-1150728 2 0.933
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NZ_CP009828.1 1727937-1727966 2 0.933
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 183653-183692 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 621981-622020 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 784103-784142 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 830000-830039 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 1154833-1154872 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 2202731-2202770 2 0.95
NZ_CP009828_5 5.3|1154719|40|NZ_CP009828|PILER-CR 1154719-1154758 40 NZ_CP009828.1 2237053-2237092 2 0.95
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 2040962-2040987 2 0.923
NZ_CP009828_10 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder 2703223-2703248 26 NZ_CP009828.1 2041300-2041325 2 0.923

1. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 1154817-1154842, mismatch: 0, identity: 1.0

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
**************************

2. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 1292087-1292112, mismatch: 0, identity: 1.0

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
**************************

3. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 820985-821003, mismatch: 1, identity: 0.947

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccacacc	Protospacer
**************** **

4. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 830154-830172, mismatch: 1, identity: 0.947

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccacccc	Protospacer
****************.**

5. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 1292154-1292172, mismatch: 1, identity: 0.947

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccacacc	Protospacer
**************** **

6. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 2236979-2236997, mismatch: 1, identity: 0.947

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccacacc	Protospacer
**************** **

7. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 830124-830153, mismatch: 1, identity: 0.967

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacaataatg	Protospacer
*************.****************

8. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 1054152-1054181, mismatch: 1, identity: 0.967

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacaataatg	Protospacer
*************.****************

9. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 1712606-1712635, mismatch: 1, identity: 0.967

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacaataatg	Protospacer
*************.****************

10. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 2703259-2703288, mismatch: 1, identity: 0.967

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacaataatg	Protospacer
*************.****************

11. spacer 5.2|1154663|30|NZ_CP009828|PILER-CR matches to position: 784047-784076, mismatch: 1, identity: 0.967

aagctggcagaaagtcagcttacaataacg	CRISPR spacer
aagctggcggaaagtcagcttacaataacg	Protospacer
********.*********************

12. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 784047-784086, mismatch: 1, identity: 0.975

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataacgtgcaagttgg	Protospacer
********.*******************************

13. spacer 5.4|1154785|30|NZ_CP009828|PILER-CR matches to position: 830066-830095, mismatch: 1, identity: 0.967

tgaaattggattcccaatttctacaggcaa	CRISPR spacer
tgaaattggattcccaatttctacagacaa	Protospacer
**************************.***

14. spacer 8.1|2202706|25|NZ_CP009828|CRISPRCasFinder matches to position: 1922086-1922110, mismatch: 1, identity: 0.96

tgtcagcttctgtgttggggccccg	CRISPR spacer
tgtcagcttctatgttggggccccg	Protospacer
***********.*************

15. spacer 8.1|2202706|25|NZ_CP009828|CRISPRCasFinder matches to position: 2202762-2202786, mismatch: 1, identity: 0.96

tgtcagcttctgtgttggggccccg	CRISPR spacer
tgtcagcttctatgttggggccccg	Protospacer
***********.*************

16. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 784031-784056, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccccg	Protospacer
************.*************

17. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 784087-784112, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccccg	Protospacer
************.*************

18. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 830030-830055, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccccg	Protospacer
************.*************

19. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 1893240-1893265, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagctactatgttggggccccg	Protospacer
********* ****************

20. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 2120301-2120326, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccccg	Protospacer
************.*************

21. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 2237037-2237062, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccccg	Protospacer
************.*************

22. spacer 2.1|774598|30|NZ_CP009828|CRISPRCasFinder matches to position: 815640-815669, mismatch: 2, identity: 0.933

cagagaaattggaacgccaatttctacagg	CRISPR spacer
caaagaaattggaacaccaatttctacagg	Protospacer
**.************.**************

23. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 183693-183711, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccccacc	Protospacer
************** * **

24. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 621962-621980, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctatgttggggcccacacc	Protospacer
**.************* **

25. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 931638-931656, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggcccgcccc	Protospacer
**************.*.**

26. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 1150566-1150584, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctatgttggggcccacccc	Protospacer
**.*************.**

27. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 1366733-1366751, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggagcccacccc	Protospacer
*********.******.**

28. spacer 3.2|951929|19|NZ_CP009828|PILER-CR matches to position: 1747693-1747711, mismatch: 2, identity: 0.895

ctgtgttggggcccactcc	CRISPR spacer
ctgtgttggggccccatcc	Protospacer
**************  ***

29. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 820899-820928, mismatch: 2, identity: 0.933

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacgataatg	Protospacer
*************.*********.******

30. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 886769-886798, mismatch: 2, identity: 0.933

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctgacgaaaagtcagcttacgataatg	Protospacer
*************.*********.******

31. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 1150699-1150728, mismatch: 2, identity: 0.933

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctggcgaaaagtcagcttacaataatg	Protospacer
******.******.****************

32. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to position: 1727937-1727966, mismatch: 2, identity: 0.933

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
aagctggcgaaaagtcagcttacaataatg	Protospacer
******.******.****************

33. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 183653-183692, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

34. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 621981-622020, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

35. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 784103-784142, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

36. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 830000-830039, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

37. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 1154833-1154872, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

38. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 2202731-2202770, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctgacagaaagtcagcttacaataatgtgcaagttgg	Protospacer
******.*********************.***********

39. spacer 5.3|1154719|40|NZ_CP009828|PILER-CR matches to position: 2237053-2237092, mismatch: 2, identity: 0.95

aagctggcagaaagtcagcttacaataacgtgcaagttgg	CRISPR spacer
aagctggcggaaagtcagcttacaataatgtgcaagttgg	Protospacer
********.*******************.***********

40. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 2040962-2040987, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtcttggggccccg	Protospacer
************.* ***********

41. spacer 10.1|2703223|26|NZ_CP009828|CRISPRCasFinder matches to position: 2041300-2041325, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttttgtgttggggccccg	Protospacer
**********.*.*************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 MT670422 Pseudomonas phage phiPsa397, complete genome 92792-92821 6 0.8
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 NC_023601 Pseudomonas phage phiPsa374, complete genome 91744-91773 6 0.8
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 MT670421 Pseudomonas phage phiPsa381, complete genome 92566-92595 6 0.8
NZ_CP009828_1 1.1|658118|30|NZ_CP009828|CRISPRCasFinder 658118-658147 30 NZ_CP023312 Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence 270977-271006 7 0.767
NZ_CP009828_5 5.1|1154607|30|NZ_CP009828|PILER-CR 1154607-1154636 30 LN846932 Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome 10621-10650 7 0.767
NZ_CP009828_2 2.1|774598|30|NZ_CP009828|CRISPRCasFinder 774598-774627 30 KC139649 Salmonella phage FSL SP-069 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, hypothetical proteins, deoxyuridine 5'-triphosphate nucleotidohydrolase, hypothetical proteins, NinH, head morphogenesis protein, hypothetical proteins, capsid related protein, hypothetical proteins, enolase-like protein, hypothetical proteins, tail fiber, hypothetical protein, putative endolysin, hypothetical proteins, and DNA polymerase genes, complete cds 9669-9698 9 0.7
NZ_CP009828_2 2.1|774598|30|NZ_CP009828|CRISPRCasFinder 774598-774627 30 KC139636 Salmonella phage FSL SP-062 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, and hypothetical proteins genes, complete cds 9669-9698 9 0.7
NZ_CP009828_2 2.1|774598|30|NZ_CP009828|CRISPRCasFinder 774598-774627 30 NC_025443 Salmonella phage 9NA, complete genome 7835-7864 9 0.7

1. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to MT670422 (Pseudomonas phage phiPsa397, complete genome) position: , mismatch: 6, identity: 0.8

---aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
tgcaggc---cgaaaaatcagcttccaataacg	Protospacer
   *.**   ************** ******.*

2. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to NC_023601 (Pseudomonas phage phiPsa374, complete genome) position: , mismatch: 6, identity: 0.8

---aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
tgcaggc---cgaaaaatcagcttccaataacg	Protospacer
   *.**   ************** ******.*

3. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to MT670421 (Pseudomonas phage phiPsa381, complete genome) position: , mismatch: 6, identity: 0.8

---aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
tgcaggc---cgaaaaatcagcttccaataacg	Protospacer
   *.**   ************** ******.*

4. spacer 1.1|658118|30|NZ_CP009828|CRISPRCasFinder matches to NZ_CP023312 (Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence) position: , mismatch: 7, identity: 0.767

gttaaagaatacagttggtttgcttgcgca	CRISPR spacer
aagtaagaatacagttgctttgctcgcgcc	Protospacer
.   ************* ******.**** 

5. spacer 5.1|1154607|30|NZ_CP009828|PILER-CR matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 7, identity: 0.767

aagctgacgaaaaatcagcttacaataatg	CRISPR spacer
atgaagacgaaaaatcagattacgataaat	Protospacer
* *  ************* ****.****  

6. spacer 2.1|774598|30|NZ_CP009828|CRISPRCasFinder matches to KC139649 (Salmonella phage FSL SP-069 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, hypothetical proteins, deoxyuridine 5'-triphosphate nucleotidohydrolase, hypothetical proteins, NinH, head morphogenesis protein, hypothetical proteins, capsid related protein, hypothetical proteins, enolase-like protein, hypothetical proteins, tail fiber, hypothetical protein, putative endolysin, hypothetical proteins, and DNA polymerase genes, complete cds) position: , mismatch: 9, identity: 0.7

cagagaaattggaacgccaatttctacagg	CRISPR spacer
agctttaattggtacgccaatttctacatc	Protospacer
 .    ****** ***************  

7. spacer 2.1|774598|30|NZ_CP009828|CRISPRCasFinder matches to KC139636 (Salmonella phage FSL SP-062 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, and hypothetical proteins genes, complete cds) position: , mismatch: 9, identity: 0.7

cagagaaattggaacgccaatttctacagg	CRISPR spacer
agctttaattggtacgccaatttctacatc	Protospacer
 .    ****** ***************  

8. spacer 2.1|774598|30|NZ_CP009828|CRISPRCasFinder matches to NC_025443 (Salmonella phage 9NA, complete genome) position: , mismatch: 9, identity: 0.7

cagagaaattggaacgccaatttctacagg	CRISPR spacer
agctttaattggtacgccaatttctacatc	Protospacer
 .    ****** ***************  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 752920 : 760740 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 772721 : 787231 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 867870 : 889371 33 Staphylococcus_phage(77.78%) integrase,coat,terminase attL 866177:866198|attR 886839:886860
DBSCAN-SWA_4 977643 : 1023369 38 Streptococcus_phage(33.33%) transposase,tRNA,bacteriocin,protease NA
DBSCAN-SWA_5 1055576 : 1064049 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1322191 : 1329695 14 Staphylococcus_phage(87.5%) capsid NA
DBSCAN-SWA_7 1503993 : 1628857 184 Staphylococcus_phage(90.51%) protease,capsid,integrase,tRNA,head,portal,tail,holin attL 1580992:1581051|attR 1623164:1623275
DBSCAN-SWA_8 1683979 : 1692291 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_9 1762935 : 1771978 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_10 1897955 : 1943882 43 Staphylococcus_phage(94.29%) tRNA,protease NA
DBSCAN-SWA_11 1949436 : 1957750 9 Staphylococcus_phage(77.78%) NA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP009828.1|WP_000384172.1|1923365_1923590_-|hypothetical-protein 1923365_1923590_- 74 aa aa NA NA NA 1897955-1943882 yes