CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN831035	Haemophilus influenzae strain NCTC8143 chromosome 1	2 crisprs	DinG,DEDDh,cas3,WYL,RT	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN831035_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN831035_1

8696-8845

Orphan

Consensus_repeat	Method
ACTTCTACTGACAAAACAACAGTAGCTGATAATTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN831035_1

>merge|NZ_LN831035|1|8696-8845|CRISPRCasFinder
ACTTCTACTGAAGAAACAACAGTAACTTCTACTGACAAAACAACAGTAGCTGATAATTCAAAAAGCAGTAAGCCAAATCGTAGACATAGAAGAAGTGTTAGCCAGCCTCAAGAGACTTCTACTGAAAAAACAACAGTAGCTGATAATTCA

>NZ_LN831035|1|1|8696-8845|CRISPRCasFinder
ACTTCTACTGAAGAAACAACAGTAACTTCTACTGAC	AAAACAACAGTAGCTGATAATTCAAAAAGCAGTAAGCCAAATCGTAGACATAGAAGAAGTGTTAGCCAGCCTCAAGAG
ACTTCTACTGAAAAAACAACAGTAGCTGATAATTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN831035.1\|WP_038440278.1\|9933_10536_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_LN831035.1\|WP_012055334.1\|15399_16521_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_LN831035.1\|WP_038440280.1\|13308_14856_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
NZ_LN831035.1\|WP_005669701.1\|1623_2724_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NZ_LN831035.1\|WP_005651586.1\|17342_17924_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN831035.1\|WP_058222239.1\|2725_3805_+\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|273173
NZ_LN831035.1\|WP_005659251.1\|19223_19709_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_LN831035.1\|WP_058222135.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_LN831035.1\|WP_011272333.1\|10560_11970_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_LN831035.1\|WP_005651583.1\|19803_20103_-\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020
NZ_LN831035.1\|WP_038440279.1\|12146_13223_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_LN831035.1\|WP_005659252.1\|18019_18985_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_LN831035.1\|WP_005688368.1\|16573_17350_+\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999

Protein	Function_ID	Function_description	E-value
NZ_LN831035.1\|WP_005659251.1\|19223_19709_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.55567e-87
NZ_LN831035.1\|WP_012055334.1\|15399_16521_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	5.07778e-139
NZ_LN831035.1\|WP_038440280.1\|13308_14856_-\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NZ_LN831035.1\|WP_005669701.1\|1623_2724_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	3.37049e-179
NZ_LN831035.1\|WP_058222239.1\|2725_3805_+\|DNA-replication/repair-protein-RecF	gnl\|CDD\|273173	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein. All proteins in this family for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	6.83661e-178
NZ_LN831035.1\|WP_038440278.1\|9933_10536_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	4.01041e-141
NZ_LN831035.1\|WP_058222135.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LN831035.1\|WP_011272333.1\|10560_11970_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_LN831035.1\|WP_005651583.1\|19803_20103_-\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	5.47901e-55
NZ_LN831035.1\|WP_038440279.1\|12146_13223_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_LN831035.1\|WP_005659252.1\|18019_18985_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_LN831035.1\|WP_005688368.1\|16573_17350_+\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	2.57044e-149

>NZ_LN831035.1|WP_058222239.1|2725_3805_+|DNA-replication/repair-protein-RecF
MAISRLLVEKFRNLTAVDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNRIISYDQPHFTLFGQIQESQHQWSVGLQKLRQGSTLVKINGEDGNKISDLAHLLPMQLITPEGLTLLNGGPSYRRAFLDWGLFHHQTSFYSAWSNLNRLLKQRNAALAQNQPYSAIKIWDVELAKLAHQVSQWRAEYAEALRPEIEQTCQLFLPELEINVSFHQGWEKNADYYEILQQNFERDRALNYTFAGPQKADFRFKAQGLPVEDVLSRGQLKLLMCALRLAQGEHLMKEKQRHCIFLIDDFASELDQYKRALLAERLQQSGSQVFVTAITQRQLKEMQVENKKMFSVHNGIINALN
>NZ_LN831035.1|WP_005669701.1|1623_2724_+|DNA-polymerase-III-subunit-beta
MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLSSSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQDRALVQSGRSRFTLTTQPAEEYPNLTDWQSEVDFELPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGNLLRTVATDGHRLAVCTISLEQELQNHSVILPRKGVLELVRLLETNDEPARLQIGTNNLRVHLKNTVFTSKLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITASNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCNQVRMRLTDAFSSCLIENCEDSSSEYVIMPMRL
>NZ_LN831035.1|WP_058222135.1|0_1365_+|chromosomal-replication-initiator-protein-DnaA
MTLSNLWQSCLLQLQDQVSASDLSTWLRPLQADVVSNNHIVLYASNMFVKGWVETHYLAQIQQICQTLAQNPELRISLKEGVKPAPKIVESTPNTTLRSESAVDFQTESNTPIKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGEPSANPFFLYGGTGLGKTHLLHAIGNGILANKPNARVLYIHANNFMQHMVKAVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNNLFETGRQIILTSDRYPKEIEKIEERLKSRFGWGLTTAIEPPDLETRVAILLKKAEEHNMNLPEEVAFFIAQRLRTNVRELEGALNRVKAMQDFKGGDIDIDFVRDTLKDILALQERLVTIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIRTLSA
>NZ_LN831035.1|WP_038440278.1|9933_10536_-|3-isopropylmalate-dehydratase-small-subunit
MAGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEFVLNYPRYQGATILLARKNLGCGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLPIRLSEEEVEEIFQWVWANDGKQIHVDLEAMTVTVGDKVYHFELDEFRRHCLLNGLDNIGLTLQHEDKISAYEKNIPAFLR
>NZ_LN831035.1|WP_011272333.1|10560_11970_-|3-isopropylmalate-dehydratase-large-subunit
MAKTLYEKLFDSHIVYEAEGETPILYINRHLIHEVTSPQAFDGLRVANRQVRQVNKTFGTMDHSISTQVRDVNKLEGQAKIQVLELDKNTKATGIKLFDITTKEQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQARAKSMKIEVRGKVASGITAKDIILAIIGKTTMAGGTGHVVEFCGEAIRDLSMEGRMTVCNMAIEMGAKAGLIAPDETTFAYLKDRPHAPKGKDWDDAVAYWKTLKSDDDAQFDTVVTLEAKDIAPQVTWGTNPGQVISVNETIPNPQEMADPVQRASAEKALHYIGLEAGTNLKDIKVDQVFIGSCTNSRIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKEGLDKIFIAAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSPAMAAAAGMFGKFVDIREVALN
>NZ_LN831035.1|WP_038440279.1|12146_13223_-|3-isopropylmalate-dehydrogenase
MQSYNIAVLAGDGIGPEVMAEAIKVLNKVQEKFGFKLNFNEFFVGGAAIDHCGYPLPAETLKGCDEADAILFGSVGGPKWTNLPPDQQPERGALLPLRKYFKLFCNLRPATLYKGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGREGDGTQTKAFDTEVYYKYEIERIARAAFDAAMKRNKKVTSVDKANVLQSSILWRETVTEMAKDYPEVTLEHIYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASGHRTADLADDSTPVSTAEMGTLITQAI
>NZ_LN831035.1|WP_038440280.1|13308_14856_-|2-isopropylmalate-synthase
MTDRVIIFDTTLRDGEQALKASLTVKEKLQIALALERLGVDVMEVGFPVSSQGDFESVQTIARHIKNARVAALSRAVDKDIDAAYEALKVAEAFRIHTFIASSALHVEAKLKRSFDDVVGMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAINAGATTVNIPDTVGFCLPNEYGNIIAQVRNRVPNIDKAVISVHCHNDLGMATANSLTAVQNGARQIECTINGIGERAGNTSLEEVVMAMKVRQDFMGVDTRINTQEIHRVSQMVSQLCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSGRAAVKGHMTDMGYNEQDYDLDKLYDAFLKLADKKGQVFDYDLEALAFIDMQQGDEDRLVLDKLSAHSTKEYPATAFVQLKLDGEKLSTSSIGGNGPVDAVYNAILNLTGLEIKMSHYNLTAKGEGAEALGQVDIVVEHKGRKFHGVGLATDIVESSALALVHAINAIYRAHKVADIKNHKQH
>NZ_LN831035.1|WP_012055334.1|15399_16521_+|DNA-protecting-protein-DprA
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALAWSQKEGNHLVNYFSPFYPFLLKQTANFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITARYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV
>NZ_LN831035.1|WP_005688368.1|16573_17350_+|peroxide-stress-protein-YaaA
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLNAARFAEWTKIHNEDNSRPALFAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAIDAQGDNVLVNLASDEYYKSVKENQLNAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYLIQHRLTNIEQLKEFDLAGYWFDSASSTETEFVFKRDINE
>NZ_LN831035.1|WP_005651586.1|17342_17924_+|hypothetical-protein
MNKIFVILTALILSGCATKLTQLNVPTQLEYNGKHYVLTGSQDLGTIARYAYISKPDTLENWQSEIEILFDRNQPARSIKERIALRERIYRNTDVKDFHFDTIPENSTNPNELNGYVIYSPTKENPSWQVNVMKGRQLPQCGFVQFQYSQKIQQPTRSKHLSVDKVQQHLQKYVVDIERKHLQNLKWQLFCEK
>NZ_LN831035.1|WP_005659252.1|18019_18985_+|6-phosphofructokinase
MIKKIAVLTSGGDAPGMNAAIRGVVRSALAEGLEVFGIYDGYQGLYNNKIKQLNRYSVSDVINRGGTFLGSARFPEFKDPNIRAKCAEILRSHGIDALVVIGGDGSYMGAKLLTEEHCFPCVGLPGTIDNDVAGTDYTIGYQTALQTAVDAIDRLRDTSSSHQRISIVEIMGRHCSDLTISAGIAGGCEYIVASEIEFNREELIQQIERSIIRGKRHAIIAITELLTDVHSLAKEIEARVGHETRATVLGHIQRGGSPCAFDRILASRMGAYAVDLLLQGKGGYCVGIQNEQLVHHDIIDAINNMQRVFKADWLKVAKRLE
>NZ_LN831035.1|WP_005659251.1|19223_19709_+|SsrA-binding-protein-SmpB
MTKKKVKPNSNTIALNKRARHDYFIEDEIEAGLELQGWEVKSIRAGKANISDSYVIFKNGEAFLFGASIQPLNVASTHIVCDPTRTRKLLLNKRELASLFGKANRDGFTIVALSLYWKSAWAKVKIGLAKGKKQQDKRDDIKEREWKVTKDRIMKNAHRRS
>NZ_LN831035.1|WP_005651583.1|19803_20103_-|DNA-binding-transcriptional-regulator-Fis
MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVNDLYELVLAEVEHPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG

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Crispr_ID: NZ_LN831035_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN831035_2

1173166-1173314

Orphan

Consensus_repeat	Method
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_LN831035_2

>merge|NZ_LN831035|2|1173166-1173314|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>NZ_LN831035|2|2|1173166-1173314|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAA
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN831035.1\|WP_011272763.1\|1169302_1171894_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	unknown	unknown	gnl\|CDD\|234980
NZ_LN831035.1\|WP_011272760.1\|1175590_1177318_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
NZ_LN831035.1\|WP_011272765.1\|1165215_1167561_-\|penicillin-binding-protein-1B	unknown	unknown	gnl\|CDD\|273952
NZ_LN831035.1\|WP_005658253.1\|1180473_1181829_+\|two-component-system-sensor-histidine-kinase-QseC	unknown	unknown	gnl\|CDD\|182388
NZ_LN831035.1\|WP_005688032.1\|1179382_1179748_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|129260
NZ_LN831035.1\|WP_005670302.1\|1167922_1168267_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_LN831035.1\|WP_005688053.1\|1162680_1164015_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_LN831035.1\|WP_005688057.1\|1160635_1161373_+\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|212111
NZ_LN831035.1\|WP_044365010.1\|1179811_1180477_+\|response-regulator	unknown	unknown	gnl\|CDD\|182387
NZ_LN831035.1\|WP_005661057.1\|1164170_1165043_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NZ_LN831035.1\|WP_011272762.1\|1174054_1175095_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_LN831035.1\|WP_011272764.1\|1167567_1167921_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|225654
NZ_LN831035.1\|WP_005649958.1\|1168402_1169209_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_LN831035.1\|WP_011272759.1\|1177377_1177878_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_LN831035.1\|WP_005688044.1\|1171968_1173036_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|131433
NZ_LN831035.1\|WP_005658248.1\|1184168_1185644_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_LN831035.1\|WP_011272761.1\|1175253_1175511_+\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_LN831035.1\|WP_005688055.1\|1161416_1162610_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|224826
NZ_LN831035.1\|WP_009500975.1\|1173435_1173984_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_LN831035.1\|WP_005658251.1\|1182105_1184133_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|224211

Protein	Function_ID	Function_description	E-value
NZ_LN831035.1\|WP_011272763.1\|1169302_1171894_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
NZ_LN831035.1\|WP_011272760.1\|1175590_1177318_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
NZ_LN831035.1\|WP_011272765.1\|1165215_1167561_-\|penicillin-binding-protein-1B	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_LN831035.1\|WP_005658253.1\|1180473_1181829_+\|two-component-system-sensor-histidine-kinase-QseC	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	3.24236e-178
NZ_LN831035.1\|WP_005688032.1\|1179382_1179748_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|129260	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae. [Hypothetical proteins, Conserved].	7.86445e-56
NZ_LN831035.1\|WP_005670302.1\|1167922_1168267_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	3.07846e-82
NZ_LN831035.1\|WP_005688053.1\|1162680_1164015_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_LN831035.1\|WP_005688057.1\|1160635_1161373_+\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|212111	cd10800, LamB_YcsF_YbgL_like, Escherichia coli putative lactam utilization protein YbgL and similar proteins. This subfamily of the LamB/YbgL family is represented by the Escherichia coli putative lactam utilization protein YbgL. Although their molecular function of member of this subfamily is unknown, they show high sequence similarity to the Aspergillus nidulans lactam utilization protein LamB, which might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.	5.85636e-152
NZ_LN831035.1\|WP_044365010.1\|1179811_1180477_+\|response-regulator	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	1.31526e-100
NZ_LN831035.1\|WP_005661057.1\|1164170_1165043_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_LN831035.1\|WP_011272762.1\|1174054_1175095_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_LN831035.1\|WP_011272764.1\|1167567_1167921_-\|YacL-family-protein	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	2.75988e-60
NZ_LN831035.1\|WP_005649958.1\|1168402_1169209_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.6579e-160
NZ_LN831035.1\|WP_011272759.1\|1177377_1177878_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	3.01561e-101
NZ_LN831035.1\|WP_005688044.1\|1171968_1173036_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_LN831035.1\|WP_005658248.1\|1184168_1185644_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_LN831035.1\|WP_011272761.1\|1175253_1175511_+\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	2.3023e-37
NZ_LN831035.1\|WP_005688055.1\|1161416_1162610_+\|divalent-metal-cation-transporter	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	2.41376e-86
NZ_LN831035.1\|WP_009500975.1\|1173435_1173984_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.63664e-134
NZ_LN831035.1\|WP_005658251.1\|1182105_1184133_+\|BCCT-family-transporter	gnl\|CDD\|224211	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane].	0

>NZ_LN831035.1|WP_005688044.1|1171968_1173036_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MLSIFVTFLGAFLTLIVMRPLANWIGLVDKPNYRKRHQGTIPLIGGVSLFVGNLCYYLMEWDQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNIYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGILMYRDGQMDMAHWSFALIVSILPYLMLNLGIPFGPKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITFVSAVCATIGILGEVYYVNEWAMFVGFFILFFLYVYSITHAWRITRWVRRMKRRAKRLKKA
>NZ_LN831035.1|WP_011272763.1|1169302_1171894_+|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD
MLFSPTLSSPLTPSAVKIERENLKQFELENFSRYSIFELIENRCDFYDALLIQLWQEIELSEQLGIALIAVGGYGRREMFPLSDLDFLILVEQTPSPEIEEKITQFIQFLWDCGFEVGNSVRTLEQCESEGKQDITIATNLLEARFLAGNRPHFDALNELVKRADFWSKEDFFNAKVQEQIERYQRYHNTAYNLEPDIKYSPGGLRDLHLLYWVALRHSGALTLEAILQSGFIYPQEYQQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGEGNPAVEKMMKCFFQALHRISLISNLLIQHYRENVLPSNQDTVIDQLDDDFQLINQCLCLRNSFVFQEKPARILDLFFYLTQYEHANIHSDTLRQLQISLDQLSQKLCEIPAAREKFLRLFNQPNAIKRAFMPMHQYGVLTAYLPQWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQLSDRTLLYIAALFHDIAKGRGGDHAELGAVDIADFAQLHGLDRREIDTLAWLVKSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNGNLWNSWKRSLFASLYEFTGRQFSQGMKELLDYSEKSAENRKLAQQILMRDYSDITPISIEQLWARCPEDYFVRNTPKQIAWHTSLLVDFVEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILRNVLYRNIG
>NZ_LN831035.1|WP_005649958.1|1168402_1169209_+|type-I-methionyl-aminopeptidase
MAIPIRTEKEIVKLREACKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKPDIRLNEIGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMVNV
>NZ_LN831035.1|WP_005670302.1|1167922_1168267_-|iron-sulfur-cluster-insertion-protein-ErpA
MIDDMAVPLTFTDAAANKVKSLISEEENTNLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>NZ_LN831035.1|WP_011272764.1|1167567_1167921_-|YacL-family-protein
MDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNSDKILTALSTAKSLIENQEKVLVGAEYTLFLNADEVMVRANNLAIESDEILEQDFHYYDEESLAFCGTQDFIHFLQSYVDFIA
>NZ_LN831035.1|WP_011272765.1|1165215_1167561_-|penicillin-binding-protein-1B
MTSQHSAKKSSKNTPKNNRTFKGFLLKFSFTALVLTIFYGGYLDWQIRSKMDGQIWHLPAEVYSRLESVKIADNLAFDEVIQILLDNEYRQTTMVAAPGDFKLEDDSIVILRRAFPFPDKAEPQRVLRLRFSHNKLSRIEDLVTVKTVDEFRLAPKLIAMLQSDNEDRLAIPLQNYPRLLIDTLILTEDRRFYEHNGINPVGILRALIANIRAGQTVQGGSTLTQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLRLMLEHKMIGDELYQLLSQRPLGVQKKGQISRKYPAFIQTLQADLRRELGEHKISSLLGARIFSTMDLKQQAQAENAVVNTVSQLQLKMKNPHLEGAMIITDYRTGEIRAVVGGLQTQYAGFNRALMAKRQIGSLVKPSIYLTALSNPEQFRLNTPINNQPITINVKGSPPWQPRNYDKKYSDSVMLMDALARSLNIPTVNIGMKVGLSKVIDTQKAMGWDNVEIPKVPAMLLGSYSISPYDVTKLYQTLANQGGRIALTTVDSIADRQGNLIFQHDKSAKQVVPQEAAFQTLFAMQQTVERGTARSLQKDYADLHLAGKTGTTNESRDTWFVGIDGKNISTVWLGRDDNGETKLTGASGALQIYKDYLNRTNIEKLAITPPTTVKWVGINQYGDWDCESYRTIPVWLNNGQNFCGETSSPSLTPTTETETPPQESLWDVLDNPNPPAQ
>NZ_LN831035.1|WP_005661057.1|1164170_1165043_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTQQLPILSLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPRKGEILTQISNFWFNKLAHIMPNHFTGDSVYDVLPKEEADLIRDRTVVCKRLNPIKIESIVRGYLTGSGLKDYKQTGTICGLKLPEGLVEASKLPEAIFTPSSKEEVGNHDINISYAECEKLIGADLAAQVKEKAIALYTVAAEYALTKGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWSVDTYQAGTNPPSFDKQFVRDWLENSGWNKQAPAPKVPENIIQKTVDKYQEALDLLTK
>NZ_LN831035.1|WP_005688053.1|1162680_1164015_-|argininosuccinate-synthase
MSNTILQNLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENARLIDCRSQLAHEGIAAIQCGAFHISTGGIPYFNTTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPNLKIYKPWLDVQFIEELGGRLEMSQFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEQLSTGMKIVKPIMGVAFWDEKVEIKPETVTVTFEDGVPVALNGKHFDNAVDLILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGIRLGRLLYQGRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEKVEDAPFDPVDRIGQLTMRNLDVSDTRGKLGIYAQTGLLSAIKDSVLPQLGKK
>NZ_LN831035.1|WP_005688055.1|1161416_1162610_+|divalent-metal-cation-transporter
MASITHRRNAVLGAAFLMATSAIGPGFLTQTATFTNTLLASFGFVILLSILLDIGAQLNIWRIVIVSGKRAQDISNAVFPKAGYFLAALIVMGGLAFNIGNVGGAGLGLNSIFGIAPEMGAVISGIIAILIFLRKEAGLLMDRFAQLMGFIMVALTFYVMFKTEPPVAEAAYHSFIPEKIDPIAIVTLVGGTVGGYITFAGAHRLLDAGIQGEKAMAEVSRSSVSAILIASTMRVVLFLAVLGVVSKGVSLNPKNPAETPFEYVAGNFGQVLFGVVIWAASVTSVIGAAYTSVSFLTTLCPTIERNRNRWIIAFIVISTVVLVTVGKPAAVLVFVGTLNGLILPIALALILLAAYRSDIVGTYKHPVFLAFSGWFVVIIMAILSGKTIISYISSFFS
>NZ_LN831035.1|WP_005688057.1|1160635_1161373_+|5-oxoprolinase-subunit-PxpA
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELIAHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPNLKLMGLAGSLMLRIAEEEKLQTISEVFADRHYMPDGSLVPRSQPNAMVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNHIKITA
>NZ_LN831035.1|WP_009500975.1|1173435_1173984_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMKLD
>NZ_LN831035.1|WP_011272762.1|1174054_1175095_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISPVRYDSYHRLIESLSETKSQRHFSLV
>NZ_LN831035.1|WP_011272761.1|1175253_1175511_+|phosphocarrier-protein-Hpr
MYSKDVEIIAPNGLHTRPAAQFVKEAKAFSSEITVTSGGKSASAKSLFKLQTLVLTQGTILTISADGEDEQQAVEHLVALIPTLE
>NZ_LN831035.1|WP_011272760.1|1175590_1177318_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDEEVARFYEGRAAAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLRSNKVNAGVAASKILDQQVTMLSEIDDEYLKERAGDIRDIANRLVKNILGMHIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNKVTKLVNTGDYLILDAINNQVYINPTASQIDELKALEAKISEEKAELAKLKDLPAITLDGHKVDIVANIGTIRDCDGAERNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKQVVEAMNGRLTVLRTMDIGGDKELSYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASAFGKLAVMFPMIISVEEIRELKAVIETLKAELREEGRVFDNNIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNEFISHLYNPMHPSVLGLIKQVIDASHTEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKALADAALQKPTAAEIDQLIEEFLLENSLN
>NZ_LN831035.1|WP_011272759.1|1177377_1177878_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLFGSKENKSVEVEIYAPISGEIVNIEDVPDVVFSEKIVGDGIAVRPIGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSIKRGDTVIEFDLPLLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLALKK
>NZ_LN831035.1|WP_005688032.1|1179382_1179748_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKFALATIFALATTSAFAGFNGNNSQGGFQQTAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEAFEKAELDVLRVEKAE
>NZ_LN831035.1|WP_044365010.1|1179811_1180477_+|response-regulator
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSASYDAVVLDLTLPKLDGLDVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>NZ_LN831035.1|WP_005658253.1|1180473_1181829_+|two-component-system-sensor-histidine-kinase-QseC
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSQSVLKKSYDDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMILGQMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL
>NZ_LN831035.1|WP_005658251.1|1182105_1184133_+|BCCT-family-transporter
MSLSQFMTKRTSFNPLVIGVTLFFILLLMAMIFIAPEQTQALLNQAKSGIFANFSWFYVLTFSVFLGFLLILSVSSLGNIKLGQDEEEPEFSFLSWLAMLFAAGMGVGLMFFGVAEPLTHYLSDITVGSAEHKQQEALLHTLFHWGIHAWAVYGTIALALAYFGFRYKLPLALRSCFYPLLKDRINGKIGDAIDVMALLATLFGIITTLGFGSSQLGAGLEQIGWISQNSFALQVGVIVVVMCLAVFSAISGIGKGVKILSEINLTLAFCLLLFVLISGPTLYLLSAFSDNIGNYFSNLVQLSFKTYAYEQEHTSWFSGWTVLYWAWWCSWAPFVGLFIARISKGRTIREFIFGVLVIPSLFGILWFTVFGNTAVWLNDGIAAGGLGEFISSPEILLFKFLNYLPLPTITGFVSLLVISLFFITSADSGIYVLNNIASRDKSLASPAWQAIMWGTLMSVVAIVLMQSGGLANLQTMTLIVALPFALLMLVMCFSLWKGLIADKKYFSTKVNPTSIFWSGDKWKSHLEQMMNQTQEKDILRFLKNTALPAMRELRQELTGKYNLSVEINTLFEQEEPALELVIHKESMRDFMYGIKSVGREVSEQLINDENLPHIQHSVTYEPYTYFFDGRVGYDVQYMDQDELIADMLKQYERYLSLLDDVGQELMAHEQTELAE
>NZ_LN831035.1|WP_005658248.1|1184168_1185644_-|leucyl-aminopeptidase
MKYQAKNTALSQATDCIVLGIYENNKFSKSFNEIDQLTQGYLNDLVKSGELTGKLAQTILLRDLQGLSAKRLLIVGCGKKGELTERQYKQIIQAVLKTLKETNTREVISYLTEIELKDRDLYWNIRFAIETIEHTNYQFDHFKSQKAETSVLESFIFNTDCNQAQQAISHANAISSGIKAARDIANMPPNICNPAYLAEQAKNLAENSTALSLKVVDEEEMAKLGMNAYLAVSKGSENRAYMSVLTFNNAPDKNAKPIVLVGKGLTFDAGGISLKPAADMDEMKYDMCGAASVFGTMKAIAQLNLPLNVIGVLAGCENLPDGNAYRPGDILTTMNGLTVEVLNTDAEGRLVLCDALTYVERFEPELVIDVATLTGACVVALGQHNSGLVSTDNNLANALLQAATETTDKAWRLPLSEEYQEQLKSPFADLANIGGRWGGAITAGAFLSNFTKKYRWAHLDIAGTAWLQGANKGATGRPVSLLTQFLINQVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

626875 : 698257

Mannheimia_phage(11.11%)

protease,terminase,integrase,tail,portal,tRNA

attL 638177:638194|attR 663590:663607

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058222171.1\|626875_627460_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_058222172.1\|627507_628599_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_011961709.1\|630577_631720_-	ribonuclease D	U3REX2	uncultured_virus	9.2e-08	30.8
WP_011961710.1\|631775_633464_-	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	6.7e-31	26.0
WP_005686834.1\|633506_634058_-	Slp family lipoprotein	NA	NA	NA	NA
WP_058222173.1\|634082_634793_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_011961712.1\|634805_636728_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	8.6e-99	33.2
WP_005649192.1\|637054_637465_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_005649191.1\|637481_638168_+	protein TolQ	NA	NA	NA	NA
638177:638194	attL	NA	NA	NA	NA
WP_011961713.1\|638238_638658_+	colicin uptake protein TolR	NA	NA	NA	NA
WP_058222174.1\|638673_639948_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_011272014.1\|639989_641273_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_005652235.1\|641296_641758_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_050845889.1\|642191_643217_-\|integrase	site-specific integrase	K7PKD7	Enterobacteria_phage	4.3e-57	35.4
WP_005651299.1\|643114_643429_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005668273.1\|643555_643843_-	hypothetical protein	NA	NA	NA	NA
WP_005668271.1\|643846_644116_-	hypothetical protein	NA	NA	NA	NA
WP_005668266.1\|644380_644914_-	hypothetical protein	NA	NA	NA	NA
WP_005651292.1\|644985_645402_-	hypothetical protein	E5EYK4	Acinetobacter_phage	1.1e-08	35.9
WP_038440643.1\|645405_646059_-	hypothetical protein	A0A0M3LNU4	Mannheimia_phage	1.9e-05	35.1
WP_038440645.1\|646109_647273_-	DNA cytosine methyltransferase	A0A2I7RFJ9	Vibrio_phage	7.5e-90	46.4
WP_038440647.1\|647280_647640_-	hypothetical protein	NA	NA	NA	NA
WP_005668254.1\|647636_647882_-	hypothetical protein	NA	NA	NA	NA
WP_038440649.1\|647878_648775_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	8.4e-57	43.7
WP_058222175.1\|648899_649976_-	hypothetical protein	A0A0U3TGV3	Pseudomonas_phage	7.3e-07	61.9
WP_042599564.1\|650470_651121_-	translocation protein TolB precursor	A0A0M3LP90	Mannheimia_phage	5.8e-84	70.6
WP_042599563.1\|651095_652043_-	hypothetical protein	A0A2H4JAZ0	uncultured_Caudovirales_phage	3.2e-83	66.2
WP_042599562.1\|652055_652349_-	hypothetical protein	NA	NA	NA	NA
WP_005651091.1\|652345_652690_-	hypothetical protein	NA	NA	NA	NA
WP_005651093.1\|652703_653441_-	site-specific DNA-methyltransferase	A0A0E3U2R2	Fusobacterium_phage	5.2e-113	77.5
WP_012054990.1\|653531_654563_-	HNH endonuclease	D0UIK6	Aggregatibacter_phage	5.2e-42	82.8
WP_005688811.1\|654552_654804_-	hypothetical protein	NA	NA	NA	NA
WP_005668691.1\|654935_655094_-	hypothetical protein	NA	NA	NA	NA
WP_005688815.1\|655420_655642_-	hypothetical protein	NA	NA	NA	NA
WP_005655314.1\|655656_655827_+	DUF1508 domain-containing protein	NA	NA	NA	NA
WP_162877571.1\|656187_656355_+	hypothetical protein	NA	NA	NA	NA
WP_038440670.1\|656382_657231_-	DUF3800 domain-containing protein	A5X9G9	Aeromonas_virus	3.6e-57	43.7
WP_038440672.1\|657505_658207_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	1.9e-24	33.6
WP_038440673.1\|658355_658571_+	helix-turn-helix domain-containing protein	Q19UN8	Mannheimia_phage	1.2e-09	52.9
WP_058222176.1\|659348_660107_+	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	1.7e-63	62.0
WP_038440679.1\|660091_660727_+	replication P	A0A1I9KFB0	Aeromonas_phage	4.8e-06	24.7
WP_005633909.1\|660723_660948_+	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_038440680.1\|660984_661404_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.9e-64	86.2
WP_038440682.1\|661492_662029_+	recombination protein NinG	D0UIK8	Aggregatibacter_phage	7.0e-59	68.6
WP_005651339.1\|662037_662556_+	antitermination protein	G8C7V7	Escherichia_phage	3.4e-18	34.0
WP_005688862.1\|662816_663068_+	hypothetical protein	NA	NA	NA	NA
WP_005654589.1\|663048_663591_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.0e-46	51.4
WP_048940722.1\|663563_663899_+	DUF2570 family protein	Q7Y5U9	Haemophilus_phage	1.9e-17	50.0
663590:663607	attR	NA	NA	NA	NA
WP_042599556.1\|663810_664092_+	hypothetical protein	Q776X1	Haemophilus_phage	1.6e-30	73.3
WP_005668561.1\|664360_664834_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.9e-39	53.0
WP_058222177.1\|664836_666960_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	5.6e-277	67.1
WP_048950252.1\|667195_668719_+\|portal	phage portal protein	S5MW34	Escherichia_phage	2.7e-156	57.5
WP_172644167.1\|668654_670697_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A1W6JT88	Pseudomonas_phage	2.6e-202	56.9
WP_015701510.1\|670775_671099_+	DUF2190 family protein	NA	NA	NA	NA
WP_015701509.1\|671079_671391_+	hypothetical protein	NA	NA	NA	NA
WP_015701508.1\|671393_671924_+\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	2.7e-18	50.0
WP_038440699.1\|671932_672343_+\|tail	phage tail protein	NA	NA	NA	NA
WP_050846007.1\|672345_672996_+	hypothetical protein	NA	NA	NA	NA
WP_038440705.1\|673270_673678_+	hypothetical protein	NA	NA	NA	NA
WP_058222178.1\|673722_673950_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_015701504.1\|674018_674402_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_005651224.1\|674385_674688_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_101494098.1\|674703_674940_+	hypothetical protein	NA	NA	NA	NA
WP_058222179.1\|674991_678384_+	tape measure protein	A0A2P1CKJ3	Pantoea_phage	1.2e-39	24.1
WP_038440713.1\|678392_678725_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	2.7e-16	38.5
WP_005651234.1\|678816_678975_+	hypothetical protein	NA	NA	NA	NA
WP_050846004.1\|679234_680386_+	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	6.8e-35	30.1
WP_058222180.1\|680695_681586_+	antirepressor	D0UIK6	Aggregatibacter_phage	1.2e-82	55.5
WP_058222181.1\|682002_682521_+	antirepressor	G0ZNF0	Cronobacter_phage	1.3e-30	49.2
WP_058222182.1\|682564_683215_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	1.9e-34	39.6
WP_058222183.1\|683216_683924_+	C40 family peptidase	A0A1B1IV85	uncultured_Mediterranean_phage	3.4e-53	43.2
WP_058222184.1\|684585_688236_+\|tail	phage tail protein	A0A0R6PIC9	Moraxella_phage	4.5e-141	37.4
WP_038441442.1\|688432_690055_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	4.5e-210	63.7
WP_038440732.1\|690066_690669_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.6e-96	93.0
WP_013525579.1\|690665_691124_+	hypothetical protein	F6MIM0	Haemophilus_phage	4.9e-45	55.8
WP_005654873.1\|691772_692498_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_005654871.1\|692550_693003_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_005649169.1\|693069_694284_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	1.5e-32	35.5
WP_005654861.1\|694343_694724_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.4e-53	80.6
WP_005649164.1\|694781_695105_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	4.4e-24	46.7
WP_011272012.1\|695117_695642_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_005669116.1\|695692_696379_+	DUF2625 domain-containing protein	NA	NA	NA	NA
WP_011272011.1\|696397_698257_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.3e-109	42.3

DBSCAN-SWA_2

765335 : 769647

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005631184.1\|765335_765542_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	3.0e-10	52.2
WP_005686717.1\|765616_765823_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_005686717.1\|765896_766103_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_005631184.1\|766176_766383_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	3.0e-10	52.2
WP_005686717.1\|766457_766664_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_005686717.1\|766737_766944_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_005686717.1\|767017_767224_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_005686717.1\|767297_767504_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.7e-10	50.7
WP_038440794.1\|767478_769647_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.5e-195	52.0

DBSCAN-SWA_3

1010759 : 1055698

Haemophilus_phage(53.49%)

protease,capsid,terminase,integrase,tail,plate,transposase,tRNA,head

attL 1016107:1016125|attR 1063162:1063180

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005661152.1\|1010759_1011755_+	2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	1.1e-65	39.3
WP_005689970.1\|1011874_1012198_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	9.8e-16	42.4
WP_038440942.1\|1012611_1013400_-	TatD family hydrolase	NA	NA	NA	NA
WP_011271820.1\|1013541_1013973_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_011271819.1\|1013976_1014486_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	5.5e-13	32.9
WP_011271818.1\|1014588_1015968_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	8.7e-53	29.7
1016107:1016125	attL	NA	NA	NA	NA
WP_005659422.1\|1016956_1017670_-	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	5.7e-40	43.2
WP_032827525.1\|1017868_1018132_+	helix-turn-helix domain-containing protein	F6MII4	Haemophilus_phage	1.7e-29	73.6
WP_058222194.1\|1018146_1020114_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	F6MII5	Haemophilus_phage	1.6e-230	60.7
WP_080358742.1\|1020106_1020523_+	hypothetical protein	NA	NA	NA	NA
WP_005641538.1\|1020574_1021456_+	AAA family ATPase	A0A0M3LP72	Mannheimia_phage	2.5e-98	64.7
WP_050845923.1\|1021466_1021763_+	hypothetical protein	NA	NA	NA	NA
WP_005647090.1\|1021771_1021963_+	HTH domain-containing protein	F6MII8	Haemophilus_phage	9.5e-11	57.6
WP_032823840.1\|1021963_1022581_+	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	3.6e-67	59.6
WP_042611660.1\|1022764_1023325_+	DUF5420 family protein	A0A0M3LP85	Mannheimia_phage	2.5e-14	25.9
WP_042611659.1\|1023328_1023577_+	hypothetical protein	NA	NA	NA	NA
WP_042611658.1\|1023686_1023926_+	hypothetical protein	NA	NA	NA	NA
WP_050845924.1\|1023922_1024471_+	hypothetical protein	A0A0M3LPP6	Mannheimia_phage	1.7e-47	50.3
WP_042611657.1\|1024460_1024862_+	regulatory protein GemA	A0A0M3LP80	Mannheimia_phage	2.4e-19	43.8
WP_042611656.1\|1024915_1025815_+	hypothetical protein	NA	NA	NA	NA
WP_042611655.1\|1025900_1026329_+	mor transcription activator family protein	F6MIJ8	Haemophilus_phage	4.3e-27	42.3
WP_050845925.1\|1026408_1026915_+	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	2.5e-58	67.9
WP_050845926.1\|1027068_1027359_+	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	2.3e-16	61.3
WP_050845927.1\|1027358_1027616_+	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_006995442.1\|1027739_1027997_+	hypothetical protein	NA	NA	NA	NA
WP_006995441.1\|1027996_1028263_+	hypothetical protein	NA	NA	NA	NA
WP_050845928.1\|1028264_1028768_+	DUF1804 family protein	F6MIK6	Haemophilus_phage	7.1e-45	51.8
WP_050845929.1\|1028903_1030550_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	1.7e-249	78.0
WP_050845930.1\|1030561_1032184_+	DUF935 domain-containing protein	B7SDN1	Haemophilus_phage	7.5e-205	68.9
WP_058222195.1\|1032167_1033469_+\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	2.1e-173	70.0
WP_005688555.1\|1033604_1034021_+	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	2.8e-47	67.4
WP_050845932.1\|1034302_1035340_+\|protease	phage protease	B7SDN9	Haemophilus_phage	1.9e-68	47.0
WP_040034140.1\|1035339_1036263_+\|head	Mu-like prophage major head subunit gpT family protein	B7SDP1	Haemophilus_phage	7.9e-135	74.9
WP_050845933.1\|1036326_1036632_+	hypothetical protein	B7SDP3	Haemophilus_phage	9.6e-21	50.0
WP_050845934.1\|1036641_1037073_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	4.6e-37	60.9
WP_050845935.1\|1037056_1037719_+	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	9.3e-45	45.0
WP_006995430.1\|1037690_1037873_+	DUF2635 domain-containing protein	A0A0M3LQM9	Mannheimia_phage	8.2e-12	64.8
WP_050845936.1\|1037865_1039281_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B7SDP8	Haemophilus_phage	2.5e-156	62.2
WP_021034875.1\|1039290_1039662_+	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	1.2e-36	65.0
WP_050845937.1\|1039661_1040003_+	hypothetical protein	A0A0M3LSI2	Mannheimia_phage	5.3e-20	49.5
WP_021034873.1\|1040017_1040224_+	hypothetical protein	NA	NA	NA	NA
WP_050845938.1\|1040270_1042556_+\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	1.4e-92	33.6
WP_050845939.1\|1042558_1043893_+	DNA circularization N-terminal domain-containing protein	F6MIL2	Haemophilus_phage	3.5e-107	44.7
WP_050845940.1\|1043882_1045007_+\|tail	phage tail protein	F6MIL3	Haemophilus_phage	2.3e-144	71.5
WP_050845941.1\|1045016_1045652_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	1.2e-62	58.7
WP_032824912.1\|1045721_1046072_+	phage GP46 family protein	A0A0M3LQK5	Mannheimia_phage	1.4e-44	75.0
WP_050845942.1\|1046086_1047151_+\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	1.7e-128	66.7
WP_174507678.1\|1047147_1047744_+	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	3.5e-67	63.5
WP_058222196.1\|1047747_1049859_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	1.3e-241	70.5
WP_050845944.1\|1049870_1050473_+	hypothetical protein	Q94MX9	Haemophilus_virus	9.5e-97	93.0
WP_050845945.1\|1050469_1050970_+	hypothetical protein	F6MIM0	Haemophilus_phage	2.7e-52	64.3
WP_005641687.1\|1051144_1051264_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_050845946.1\|1051325_1052171_+	hypothetical protein	F6MIM2	Haemophilus_phage	2.5e-119	72.5
WP_050845947.1\|1052209_1052473_-	hypothetical protein	F6MIM3	Haemophilus_phage	5.0e-34	77.9
WP_042593635.1\|1053574_1055698_-	anaerobic ribonucleoside-triphosphate reductase	E5DPW8	Aeromonas_phage	6.2e-260	62.0
1063162:1063180	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1300552 : 1390000

Mannheimia_phage(39.39%)

protease,lysis,capsid,holin,terminase,tail,plate,portal,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011961904.1\|1300552_1302523_+\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_011272700.1\|1302519_1302693_+	DUF5363 domain-containing protein	NA	NA	NA	NA
WP_058222210.1\|1302794_1306235_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_011272698.1\|1306287_1307679_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	31.2
WP_005694317.1\|1307872_1308763_+	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_038441072.1\|1308764_1310069_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_005689857.1\|1310356_1311037_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_005689855.1\|1311194_1312271_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_005689853.1\|1312325_1314968_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.1e-103	32.3
WP_005687300.1\|1315567_1317331_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_005687298.1\|1317467_1317944_-	hypothetical protein	NA	NA	NA	NA
WP_011272695.1\|1318179_1318986_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011272694.1\|1319037_1319739_+	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	1.3e-07	28.5
WP_011272693.1\|1319782_1320643_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_038441076.1\|1320753_1322802_-\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	2.2e-60	29.3
WP_011272691.1\|1322952_1324065_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_011272690.1\|1324111_1324774_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_011272689.1\|1324887_1325562_+	N-acylneuraminate cytidylyltransferase	NA	NA	NA	NA
WP_050845914.1\|1326270_1327281_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	5.3e-116	60.1
WP_058222211.1\|1327290_1329072_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	3.8e-218	65.6
WP_058222212.1\|1329236_1330052_+\|capsid	GPO family capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	4.0e-66	61.0
WP_058222213.1\|1330073_1331123_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	2.6e-89	51.9
WP_011272685.1\|1331134_1331785_+\|terminase	terminase	Q19US0	Mannheimia_phage	4.1e-45	46.0
WP_005668469.1\|1332078_1332585_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	2.8e-33	51.0
WP_005668467.1\|1332584_1332794_+\|tail	tail protein X	NA	NA	NA	NA
WP_005668464.1\|1332795_1333017_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_005668462.1\|1333009_1333528_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.5e-37	46.6
WP_011272684.1\|1333512_1333863_+	chemotaxis protein	NA	NA	NA	NA
WP_005672208.1\|1334037_1334253_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.1e-10	47.9
WP_038441087.1\|1334249_1334513_+	hypothetical protein	NA	NA	NA	NA
WP_038441089.1\|1334478_1334949_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	7.3e-28	45.3
WP_011272680.1\|1334948_1335410_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	5.7e-25	48.2
WP_005653079.1\|1335410_1335758_-	hypothetical protein	NA	NA	NA	NA
WP_011272679.1\|1335861_1336044_+	phage virion morphogenesis protein	Q19UR2	Mannheimia_phage	8.8e-06	47.8
WP_011272678.1\|1336054_1336393_-	hypothetical protein	NA	NA	NA	NA
WP_075913143.1\|1336468_1336642_+	phage virion morphogenesis protein	Q19UR2	Mannheimia_phage	3.2e-05	53.3
WP_042593957.1\|1336619_1336880_-	hypothetical protein	NA	NA	NA	NA
WP_162836930.1\|1339832_1340000_+	hypothetical protein	NA	NA	NA	NA
WP_006995348.1\|1339977_1340430_+	hypothetical protein	NA	NA	NA	NA
WP_011272674.1\|1340527_1341085_+	hypothetical protein	NA	NA	NA	NA
WP_005653088.1\|1341093_1341522_+	hypothetical protein	NA	NA	NA	NA
WP_011272673.1\|1341625_1342225_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.2e-44	66.0
WP_005633786.1\|1342226_1342565_+	GPW/gp25 family protein	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
WP_011272672.1\|1342561_1343476_+\|plate	baseplate J/gp47 family protein	Q19UQ5	Mannheimia_phage	5.1e-94	59.5
WP_011272671.1\|1343465_1344002_+\|tail	phage tail protein I	M1T2R2	Escherichia_phage	1.6e-50	52.5
WP_058222214.1\|1344010_1346533_+\|tail	phage tail protein	Q94MY0	Haemophilus_virus	2.5e-239	64.6
WP_058222215.1\|1346544_1347147_+	hypothetical protein	Q94MX9	Haemophilus_virus	2.4e-92	89.5
WP_011272668.1\|1347143_1347647_+	hypothetical protein	F6MIM0	Haemophilus_phage	1.7e-51	63.6
WP_011272667.1\|1347703_1348525_+	hypothetical protein	NA	NA	NA	NA
WP_005642880.1\|1348538_1348907_+	hypothetical protein	NA	NA	NA	NA
WP_038441454.1\|1348923_1350063_+	hypothetical protein	NA	NA	NA	NA
WP_011272665.1\|1350072_1350600_+	hypothetical protein	NA	NA	NA	NA
WP_011272664.1\|1350603_1351368_+	hypothetical protein	NA	NA	NA	NA
WP_038441101.1\|1353029_1353485_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_005631625.1\|1353501_1354989_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_011272663.1\|1355000_1357535_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.8e-27	26.4
WP_011272662.1\|1357613_1360781_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	9.5e-79	30.6
WP_058222216.1\|1360782_1361829_-	SIR2 family protein	NA	NA	NA	NA
WP_011272660.1\|1361821_1363087_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011272659.1\|1363079_1364750_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-49	30.5
WP_005628626.1\|1364914_1365301_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_058222217.1\|1365300_1366221_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_011272657.1\|1366310_1367435_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_011272656.1\|1367467_1368307_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	6.1e-41	38.9
WP_038441106.1\|1368433_1369219_-	Zn-ribbon-containing protein	NA	NA	NA	NA
WP_050845983.1\|1369209_1369590_-	SufE family protein	NA	NA	NA	NA
WP_050845982.1\|1369586_1370786_-	cysteine desulfurase	Q2XUY6	environmental_halophage	2.2e-60	31.6
WP_005694472.1\|1370787_1371270_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	1.2e-30	47.7
WP_005650310.1\|1371384_1371807_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_005657449.1\|1371825_1372521_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_162877566.1\|1372643_1373999_+	dGTPase	NA	NA	NA	NA
WP_044364264.1\|1374092_1376036_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	3.2e-53	29.8
WP_044364263.1\|1376116_1377199_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_038441113.1\|1377329_1378100_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_005650698.1\|1378099_1378960_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	4.5e-15	28.2
WP_005650696.1\|1378943_1380062_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	1.9e-29	37.1
WP_038441117.1\|1380358_1381597_+	peptidase T	NA	NA	NA	NA
WP_005650692.1\|1382168_1382651_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_005650690.1\|1382924_1383803_+	cytidine deaminase	NA	NA	NA	NA
WP_011272649.1\|1383845_1384811_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_011272648.1\|1384807_1386322_-	sodium/proline symporter PutP	NA	NA	NA	NA
WP_005694007.1\|1386437_1387913_+	ribonuclease G	NA	NA	NA	NA
WP_038441120.1\|1388332_1390000_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	8.1e-255	77.5

DBSCAN-SWA_5

1437043 : 1449124

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074031221.1\|1437043_1438048_-	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5
WP_005650594.1\|1438565_1439054_+	non-heme ferritin	NA	NA	NA	NA
WP_005656740.1\|1439069_1439567_+	non-heme ferritin	NA	NA	NA	NA
WP_005688459.1\|1439847_1440612_+	glycosyltransferase	A7IW34	Paramecium_bursaria_Chlorella_virus	1.5e-14	29.1
WP_005687196.1\|1440713_1442270_+	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
WP_005687195.1\|1442282_1442870_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-34	40.0
WP_005662273.1\|1442918_1443305_+	tautomerase family protein	NA	NA	NA	NA
WP_005687194.1\|1443357_1444359_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	4.4e-46	39.6
WP_050846017.1\|1444399_1445830_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.5e-35	38.7
WP_050846014.1\|1446259_1449124_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	8.7e-148	37.4

DBSCAN-SWA_6

1458313 : 1474582

Haemophilus_phage(42.86%)

capsid,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005650554.1\|1458313_1458490_-	DUF2213 domain-containing protein	Q7Y5U2	Haemophilus_phage	8.5e-22	93.1
WP_075913359.1\|1458630_1459941_-\|capsid	minor capsid protein	Q7Y5U5	Haemophilus_phage	5.3e-108	78.3
WP_011272621.1\|1459840_1461175_-	DUF1073 domain-containing protein	Q7Y5U6	Haemophilus_phage	2.1e-213	84.2
WP_011272620.1\|1461176_1462520_-\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	2.8e-125	54.4
WP_011272619.1\|1462506_1463019_-\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	1.0e-19	39.2
WP_011272618.1\|1463063_1463342_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.5e-16	66.2
WP_005693951.1\|1463343_1463625_-	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
WP_011272617.1\|1463536_1463860_-	DUF2570 family protein	Q7Y5U9	Haemophilus_phage	7.8e-21	54.6
WP_032826234.1\|1463852_1464455_-	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	3.7e-56	53.4
WP_005650535.1\|1464423_1464780_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_015702297.1\|1464903_1465041_-	hypothetical protein	NA	NA	NA	NA
WP_038441183.1\|1465116_1465785_-	Bro-N domain-containing protein	D0UIM5	Aggregatibacter_phage	6.7e-67	62.3
WP_005666914.1\|1466142_1467108_+	hypothetical protein	Q8HA04	Enterobacteria_phage	1.2e-88	58.8
WP_005650528.1\|1467157_1467529_-	hypothetical protein	NA	NA	NA	NA
WP_058222221.1\|1467559_1468225_-	HNH endonuclease	A0A2I7QND8	Vibrio_phage	2.9e-38	44.1
WP_042593421.1\|1468854_1469271_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	9.6e-64	85.4
WP_005633909.1\|1469307_1469532_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_038440679.1\|1469528_1470164_-	replication P	A0A1I9KFB0	Aeromonas_phage	4.8e-06	24.7
WP_011272607.1\|1470148_1470907_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	1.6e-61	69.3
WP_011272606.1\|1470903_1471578_-	phage antirepressor KilAC domain-containing protein	D0UIL6	Aggregatibacter_phage	6.9e-80	67.9
WP_011272605.1\|1471626_1472067_-	hypothetical protein	A0A0U4B0E3	Pseudomonas_phage	1.5e-14	32.2
WP_005650512.1\|1472115_1472304_-	helix-turn-helix domain-containing protein	Q7Y5W4	Haemophilus_phage	6.5e-28	93.5
WP_005650509.1\|1472414_1473113_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.4e-112	84.5
WP_011272604.1\|1473164_1474244_+	hypothetical protein	NA	NA	NA	NA
WP_005666912.1\|1474246_1474582_+	STAS-like domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	8.1e-13	41.5

DBSCAN-SWA_7

1713245 : 1721754

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272434.1\|1713245_1713929_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-54	50.7
WP_011272433.1\|1713921_1714347_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	2.3e-20	42.0
WP_005686506.1\|1714347_1714983_+	7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	8.7e-16	30.3
WP_042594456.1\|1715592_1717773_+	DNA helicase II	A7KV33	Bacillus_phage	5.1e-116	37.6
WP_005647473.1\|1717862_1718864_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005653671.1\|1718878_1719766_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_058222233.1\|1719775_1720768_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-14	30.8
WP_005663823.1\|1720770_1721754_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-20	32.8

DBSCAN-SWA_8

1848578 : 1860877

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272359.1\|1848578_1850423_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	2.8e-22	29.3
WP_005651690.1\|1850547_1850826_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_005656013.1\|1850834_1851197_-	membrane protein	NA	NA	NA	NA
WP_011272358.1\|1851171_1852281_-	transglutaminase family protein	NA	NA	NA	NA
WP_044364421.1\|1852533_1854957_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	7.0e-223	50.6
WP_038441398.1\|1854967_1855585_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.8e-73	57.8
WP_038441400.1\|1855586_1856426_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	1.1e-18	31.9
WP_011272354.1\|1856537_1857149_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	5.1e-21	32.5
WP_058222237.1\|1857148_1857649_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	5.4e-13	31.4
WP_048942113.1\|1857926_1859285_+	B12-binding domain-containing protein	NA	NA	NA	NA
WP_005659310.1\|1859311_1860877_+	RNA-directed DNA polymerase	Q2P9X6	Enterobacteria_phage	1.5e-72	33.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN831035

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection