CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN831025	Campylobacter jejuni strain NCTC11351 chromosome 1	1 crisprs	DEDDh,WYL,cas2,cas1,cas9	0	1	2	0

1. NZ_LN831025

CRISPR-Cas detection and classification

Crispr_ID: NZ_LN831025_1

• CRISPR_ID: NZ_LN831025_1
• CRISPR_location: 1574120-1574220
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_LN831025_1

Consensus_repeat	Method
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

spacers of NZ_LN831025_1

>1.1|1574155|31|NZ_LN831025|CRISPRCasFinder
CTGCCATCTCATTTTCAAATAAAGCACTAAG

CRISPR arrays and Neighbor proteins around NZ_LN831025_1

CRISPR arrays

The CRISPR arrays of NZ_LN831025_1

>merge|NZ_LN831025|1|1574120-1574220|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATCTGCCATCTCATTTTCAAATAAAGCACTAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_LN831025|1|1|1574120-1574220|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTGCCATCTCATTTTCAAATAAAGCACTAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN831025.1|WP_002855427.1|1581827_1582817_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_LN831025.1|WP_002860691.1|1569321_1570470_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_LN831025.1|WP_002851547.1|1572136_1572358_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_LN831025.1|WP_002867218.1|1583479_1584229_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_LN831025.1|WP_004307105.1|1572808_1573999_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_LN831025.1|WP_004307103.1|1572358_1572805_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_LN831025.1|WP_079263891.1|1565334_1568139_-|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|239153
NZ_LN831025.1|WP_002855377.1|1584203_1584935_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|225539
NZ_LN831025.1|WP_002851546.1|1586033_1586483_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_LN831025.1|WP_002882418.1|1586613_1587834_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|235168
NZ_LN831025.1|WP_004307093.1|1564696_1565338_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893
NZ_LN831025.1|WP_002883591.1|1574788_1575679_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|187851
NZ_LN831025.1|WP_002882718.1|1582877_1583483_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_LN831025.1|WP_002851537.1|1568138_1568330_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_LN831025.1|WP_002883590.1|1575675_1578630_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_LN831025.1|WP_016818335.1|1568304_1569018_-|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl|CDD|225916
NZ_LN831025.1|WP_002855524.1|1584931_1585969_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_LN831025.1|WP_004307101.1|1570593_1572135_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_LN831025.1|WP_004307091.1|1563767_1564700_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_LN831025.1|WP_170876396.1|1574364_1574778_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_LN831025.1|WP_002883591.1|1574788_1575679_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.3e-98	324.2	9.3
NZ_LN831025.1|WP_170876396.1|1574364_1574778_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	3.5e-55	179.9	0.7
NZ_LN831025.1|WP_002883590.1|1575675_1578630_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1178.5	70.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LN831025.1|WP_002855427.1|1581827_1582817_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_LN831025.1|WP_002860691.1|1569321_1570470_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_LN831025.1|WP_002851547.1|1572136_1572358_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	2.96853e-10
NZ_LN831025.1|WP_002867218.1|1583479_1584229_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.07556e-92
NZ_LN831025.1|WP_004307105.1|1572808_1573999_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	1.43135e-142
NZ_LN831025.1|WP_004307103.1|1572358_1572805_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	2.07332e-42
NZ_LN831025.1|WP_079263891.1|1565334_1568139_-|molybdopterin-dependent-oxidoreductase	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_LN831025.1|WP_002855377.1|1584203_1584935_+|glucosaminidase-domain-containing-protein	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	1.57422e-98
NZ_LN831025.1|WP_002851546.1|1586033_1586483_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_LN831025.1|WP_002882418.1|1586613_1587834_-|glucose-6-phosphate-isomerase	gnl|CDD|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NZ_LN831025.1|WP_004307093.1|1564696_1565338_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	4.43695e-57
NZ_LN831025.1|WP_002883591.1|1574788_1575679_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.9955e-121
NZ_LN831025.1|WP_002882718.1|1582877_1583483_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	9.15891e-69
NZ_LN831025.1|WP_002851537.1|1568138_1568330_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_LN831025.1|WP_002883590.1|1575675_1578630_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LN831025.1|WP_016818335.1|1568304_1569018_-|molecular-chaperone-TorD-family-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000703785
NZ_LN831025.1|WP_002855524.1|1584931_1585969_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.6328e-34
NZ_LN831025.1|WP_004307101.1|1570593_1572135_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.27659e-119
NZ_LN831025.1|WP_004307091.1|1563767_1564700_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.76739e-86
NZ_LN831025.1|WP_170876396.1|1574364_1574778_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.67561e-55

Protein sequences

>NZ_LN831025.1|WP_004307105.1|1572808_1573999_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIKFENGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_LN831025.1|WP_004307103.1|1572358_1572805_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MEHFTLYQDSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFNEWQKRVDFDGITLLFAHSIGDVAVHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_LN831025.1|WP_002851547.1|1572136_1572358_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKTGDKIALLPPVCGG
>NZ_LN831025.1|WP_004307101.1|1570593_1572135_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_LN831025.1|WP_002860691.1|1569321_1570470_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKAFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_LN831025.1|WP_016818335.1|1568304_1569018_-|molecular-chaperone-TorD-family-protein
MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQRIS
>NZ_LN831025.1|WP_002851537.1|1568138_1568330_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_LN831025.1|WP_079263891.1|1565334_1568139_-|molybdopterin-dependent-oxidoreductase
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVIDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPQRLKKHTLHWDKFDEVTLEGKDELAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLANNAPLNSPINTGYPQITKDNIEKVLGITLSAEEKAKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQNIKAGDRIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_LN831025.1|WP_004307093.1|1564696_1565338_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAIACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_LN831025.1|WP_004307091.1|1563767_1564700_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATILFIISIIPMFLWWIKRMLPASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_LN831025.1|WP_170876396.1|1574364_1574778_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_LN831025.1|WP_002883591.1|1574788_1575679_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQASLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_LN831025.1|WP_002883590.1|1575675_1578630_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNYSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKNFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHTIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_LN831025.1|WP_002855427.1|1581827_1582817_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_LN831025.1|WP_002882718.1|1582877_1583483_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFNLKNLLTKEKKIDRKILREIVFNNKEAKKTLENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKVRLDSQIDIEEKLKKADFIIKNTNSYVDFRQECVKVIQEISKGKM
>NZ_LN831025.1|WP_002867218.1|1583479_1584229_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGGDGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCQNLDEFDTILCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFTYKNEELFFEGKVKYCFEANYNFS
>NZ_LN831025.1|WP_002855377.1|1584203_1584935_+|glucosaminidase-domain-containing-protein
MKPIIIFLSLFLIPLFADDLKNGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQTNLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_LN831025.1|WP_002855524.1|1584931_1585969_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFEVISFDKFSLGF
>NZ_LN831025.1|WP_002851546.1|1586033_1586483_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NZ_LN831025.1|WP_002882418.1|1586613_1587834_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	MN530981	Campylobacter phage DA10, complete genome	7982-8012	1	0.968
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP015497	Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence	2415-2445	5	0.839
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_KX808482	Escherichia coli O55:H7 strain 122262 plasmid unnamed, complete sequence	39583-39613	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP045828	Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_01, complete sequence	3456-3486	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP038392	Escherichia coli O157:H7 strain DEC5B plasmid pDEC5B-4, complete sequence	14006-14036	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP035753	Escherichia coli E110019 plasmid pE110019_65, complete sequence	55897-55927	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP047380	Escherichia coli strain CAU16175 plasmid pCAU16175_2, complete sequence	3457-3487	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP038384	Escherichia coli O157:H7 strain DEC5E plasmid pDEC5E-3, complete sequence	3457-3487	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP038388	Escherichia coli O157:H7 strain DEC5D plasmid pDEC5D-3, complete sequence	18989-19019	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP038298	Escherichia coli O157:H7 strain TB182A plasmid pTB182A-4, complete sequence	5975-6005	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP038397	Escherichia coli O157:H7 strain DEC5A plasmid pDEC5A-4, complete sequence	5945-5975	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP039842	Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_2, complete sequence	45553-45583	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP027549	Escherichia coli strain 2014C-3061 plasmid unnamed, complete sequence	45301-45331	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP007135	Escherichia coli O145:H28 str. RM12761 plasmid pO145-12761, complete sequence	70426-70456	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP006263	Escherichia coli O145:H28 str. RM13516 plasmid pO145-13516, complete sequence	70425-70455	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP027545	Escherichia coli strain 2013C-3264 plasmid unnamed, complete sequence	100454-100484	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	CP051000	Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence	503-533	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP015242	Escherichia coli strain 2013C-4465 plasmid unnamed1, complete sequence	14951-14981	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP010239	Escherichia coli strain S50 plasmid A, complete sequence	77276-77306	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NC_017657	Escherichia coli O55:H7 str. RM12579 plasmid p12579_2, complete sequence	53928-53958	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NC_013942	Escherichia coli O55:H7 str. CB9615 plasmid pO55, complete sequence	53962-53992	7	0.774
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP016869	Legionella pneumophila subsp. pneumophila strain FFI102 plasmid, complete sequence	24808-24838	8	0.742
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP016871	Legionella pneumophila subsp. pneumophila strain FFI103 plasmid, complete sequence	66071-66101	8	0.742
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP016875	Legionella pneumophila subsp. pneumophila strain FFI329 plasmid, complete sequence	52345-52375	8	0.742
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_CP010136	Escherichia coli strain D1 plasmid B, complete genome	17127-17157	8	0.742
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	NZ_KT225520	Raoultella ornithinolytica strain RJ46C plasmid pRJ46C, complete sequence	1068-1098	10	0.677
NZ_LN831025_1	1.1|1574155|31|NZ_LN831025|CRISPRCasFinder	1574155-1574185	31	KT780723	Uncultured bacterium plasmid pGA45, complete sequence	122265-122295	10	0.677

1. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcattttcaaataaagcactaaa	Protospacer
******************************.

2. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP015497 (Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence) position: , mismatch: 5, identity: 0.839

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccaactcattttcaaataaatcatcacg	Protospacer
****** **************** **..* *

3. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_KX808482 (Escherichia coli O55:H7 strain 122262 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

4. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP045828 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_01, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

5. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP038392 (Escherichia coli O157:H7 strain DEC5B plasmid pDEC5B-4, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

6. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP035753 (Escherichia coli E110019 plasmid pE110019_65, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

7. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP047380 (Escherichia coli strain CAU16175 plasmid pCAU16175_2, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

8. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP038384 (Escherichia coli O157:H7 strain DEC5E plasmid pDEC5E-3, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

9. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP038388 (Escherichia coli O157:H7 strain DEC5D plasmid pDEC5D-3, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

10. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP038298 (Escherichia coli O157:H7 strain TB182A plasmid pTB182A-4, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

11. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP038397 (Escherichia coli O157:H7 strain DEC5A plasmid pDEC5A-4, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

12. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP039842 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_2, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

13. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP027549 (Escherichia coli strain 2014C-3061 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

14. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP007135 (Escherichia coli O145:H28 str. RM12761 plasmid pO145-12761, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

15. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP006263 (Escherichia coli O145:H28 str. RM13516 plasmid pO145-13516, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

16. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP027545 (Escherichia coli strain 2013C-3264 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

17. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to CP051000 (Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

18. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP015242 (Escherichia coli strain 2013C-4465 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

19. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP010239 (Escherichia coli strain S50 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

20. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NC_017657 (Escherichia coli O55:H7 str. RM12579 plasmid p12579_2, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

21. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NC_013942 (Escherichia coli O55:H7 str. CB9615 plasmid pO55, complete sequence) position: , mismatch: 7, identity: 0.774

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttacaaataatttgctatc	Protospacer
************** *******  ..***  

22. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP016869 (Legionella pneumophila subsp. pneumophila strain FFI102 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
agcccacctcattttcaaataaaccacagcg	Protospacer
   ***.**************** *** . *

23. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP016871 (Legionella pneumophila subsp. pneumophila strain FFI103 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
agcccacctcattttcaaataaaccacagcg	Protospacer
   ***.**************** *** . *

24. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP016875 (Legionella pneumophila subsp. pneumophila strain FFI329 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
agcccacctcattttcaaataaaccacagcg	Protospacer
   ***.**************** *** . *

25. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_CP010136 (Escherichia coli strain D1 plasmid B, complete genome) position: , mismatch: 8, identity: 0.742

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ctgccatctcatttgcaaataatttgccatc	Protospacer
************** *******  ..*.*  

26. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to NZ_KT225520 (Raoultella ornithinolytica strain RJ46C plasmid pRJ46C, complete sequence) position: , mismatch: 10, identity: 0.677

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ttgccatttcactttcaaataaagttagcga	Protospacer
.******.***.************.    ..

27. spacer 1.1|1574155|31|NZ_LN831025|CRISPRCasFinder matches to KT780723 (Uncultured bacterium plasmid pGA45, complete sequence) position: , mismatch: 10, identity: 0.677

ctgccatctcattttcaaataaagcactaag	CRISPR spacer
ttgccatttcactttcaaataaagttagcga	Protospacer
.******.***.************.    ..

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1187391 : 1194359	8	uncultured_Mediterranean_phage(16.67%)	NA	NA
DBSCAN-SWA_2	1469797 : 1476691	8	Synechococcus_phage(28.57%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_LN831025|1187391:1194359|DBSCAN-SWA
AATGAGCTTAGCAATAATCCCTGCTCGTGGTGGCTCAAAGGGTATTAAAAATAAAAATTTGGTTTTATTAAATAATAAACCTTTAATTTATTACACCATTAAAGCTGCACTAAATGCTAAAAGCATTAGTAAAGTTGTTGTAAGCAGTGATAGTGATGAAATTTTAAATTATGCAAAAAGCCAAAATGTTGATATTTTAAAACGCCCAATTAGCCTTGCACAAGATGATACTACAAGCGATAAAGTGCTTTTACATGCTCTAAAATTTTACAAAGATTATGAAGATGTAGTTTTTTTACAACCCACTTCGCCGCTAAGAACAAATATTCATATTGATAAAGCTTTTAATCTTTATAAAAATAGCAATGCAAATGCCCTAATTAGCGTAAGCGAATGTGATAATAAAATTCTAAAAGCCTTTGTTTGTAATGATTATGGCGATTTAGCAGGGATTTGTAATGATGAATATCCTTTTATGCCAAGGCAAAAATTGCCTAAAACTTATATGAGCAATGGTGCAATTTATATTTTAAAGATAAAAGAATTTTTAAACAATCCTAGCTTTTTGCAAAACAAAACCAAGCATTTTTTAATGGATGAAAGCTCAAGTTTAGATATTGACTGTTTAGAGGATTTAAAAAAGGTTGAACAGATATGGAAAAAATAACCTTAAAATGCAATAAAAATATATTAAATTTATTAAAGCAATATAATATTTATACAAAAACTTACATAGAAAATCCTAGAAGATTTTCAAGACTAAAAACCAAAGATTTTATAACCATTCCATTGAAAAACAATCAATTAGAGAGTGCGGCGGGGCTGGGGATAGAAGAATATTGTGCTTTTAAATTTAGCAATATCTTACATGAAATGGGTTCATTTTCTTTTAGCGGATCTTTTCTACCTCATTATGCAAAAGTTGGAAGGTATTGTTCAATTGCTGATGGGGTTTCTATGTTTAACTTTCAACACCCTATAGATAGAATCAGCACTGCAAGTTTTACCTATGAAACAAATCATAGTTTTATTAACGATGCTTGCCAAAATCACATCAACAAAACATTTCCTATAGTTAACCATAATCCAAGCTCATCAATAACGCATTTAATTATACAAGATGATGTTTGGATAGGAAAAGATGTTTTGCTTAAACAGGGTATCACACTTGGGACTGGATGTGTCATAGGACAAAGAGCTGTAGTTACTAAAGATGTACCACCTTATGCTATAGTTGCAGGAATTCCAGCCAAAATTATCAAATATAGATTTGATGAAAAAACAATAGAAAGATTATTAAAAATTCAATGGTGGAGATATCATTTTGCTGATTTTTATGATATTGATCTTAATTTAAAAATAAACCAATATCTTGACCTACTAGAAGAAAAAATCATAAAAAAATCAATTTCCTACTATAATCCAAATAAACTTTATTTTAGAGATATTTTAGAACTAAAATCAAAAAAAATTTTTAATCTATTTTAATCTATTTTTCACCCCTACTTCCTCTCTCTCCAAAACTTCAAATAATTTCTGATGAAATTCATCATGTAAAAACTCTTTGGAGAGTCTTTTTATGATTTCATTACTTTTCTTTTTATCATAATAATTTTGATTTAAAATTTCTTTATTTTTATTCTCATATCTTCCATTTGGATTAAATTCGTAATGATAAATGCAAGTTTTAAAAACAGCTATTTTCTCGCAAAACATAAAATAAATATAACAAAAAAGCACATCTTCGCCGTAACTCAAACGCTCATCGATTTTAACCTTTTCAAATTTAACCTTTTCAAAATTTTTTAAGATGATATCTTTTCTAAAACACTTCGCCCAAACTGACCAGCAAAAATGCCTTTGTTTGCTTAAGAATTCTAAAAATTCTTTTTGATTAAAAACTCCATCTTGTTTAAAACGATAAAATTGTTTGGTTTTTACCCTATGTACAAAGGCATCAAAACAAAGCAAATCAAAACCTTTTTTCATCTCTTTAAACGCTATTTCACAAGCACCAGGTGTCAAAAAATCATCACTATCTAAAAACATTATAAAATCAGAACTAGAATGCAAAACTCCTAAATTTCTACTTGCAAAAGTGCCTAAATTTTCTTCATTTTGAAAGATTTTTATCCTTGGATCTTTTTTAGCAAATTCTAAAACCATATTTAAACTATTATCTTTACTTTTATCATCGATAATCAAAATTTCAATATCTTTTAAAGTCTGATTTATACAACTTTGCAAAGCTCTTAAGATAAAATCACAAGAATTAAAAAGCGGGATTATGATCGAAAGTTGTGGCATATTTTTCCTAAATTTTGTTAAAATAATAAAAACAATTCTATCAAAGTTTAGGAAATTTATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACATTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCATCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCTTTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCACAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAAAGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCAAGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTTAATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAAAAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGTGGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACCTTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAACACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAATTAAAATTATACTTCACGTCTTAAAAATTTTATTGCCTTTTGTTTATATGTAAATTTTAAATAAATAAAATACAACCTACAAATTTCTTTAATTATTCTTTTAAAAATAGGTCTTTTGTCTTTTTTTCTCTCTTCAATAGTGGAATTAATATCTGTTGTCTTTAGTAAAAGAGGAGTGTAAGTTATAGTAAAAACTTTACTATAATAATACATATCCATAACATTATCCACTGGTTTAATCCAAAATTTTAAATTATCAATAAATTTTAAAGCCGAAATAGGTTTTATAAGATACCCTTGTGTTCCGCCAATACTATCCAAAGTAAACAAAAAATTATCATTAAGCTTCAACATTTTACCTTGTGTTAAATAACAAAGTCTTATATATTCATACTTACTCTTTAACAATTCATCTATATATTCTGCCCCATTATTTAAAAATTCATCGCTAAATTCCACATCATCTTCTAGGATGATTATAGGCTCATCAAGCTTCACACATTCTTGCCAAAGTTTATAATGACTAGCAAAACAAGCTTTTTCTCCATCAGAAAGCTCTCTGCCCAGCACCCAAGAACCCCACCAAGGAAAATGATCTTTAAATTCCAAATGTTCTTTATTTTTAGCATCAATAGCCTTAAAGAAAATAAATTCTAATTTATTTTTTAAACTAAGATTTTTTTCAAAAAGCTTTTGAATTTGTTTTTGTATATGCTCTTTTCTATCTAAAGAACGCTCTAAGTTGATGATAAAAACTTTCATTAAAAACCCTCATCTATGATCTGACAAAGTGTGTGTATGATCAAAATGTGCATTTCTTGAATTCTAGCCGTATCATCACTTGGCACGACAAGATTGTGATCGCAAAGCTTATTCATCATTCCACCACCCTTTCCACTAAGCCCTAGACAAAGCATATTAAGTTCTTTTGCTTTTTTAAAAGCTTCTAAAACATTAGGGCTTTTTCCACTGGTTGAAATACCGATTAAAACATCATTTTCATTTCCTAAAGCTTCCACTTGTCTTGAAAAAACAAACTCAAAACCATAGTCATTTCCTATAGCACTAAGTGCTGAAGTATCGGTTGTAAGCGCTATACCTGCTAAAGCCTTGCGTTCTTTTTTATAACGCCCGCTAAGTTCAGCCGCAAAATGCTGAGCATCAGCTGCGCTTCCACCATTTCCGCAAATCAAAATCTTGCCGCCTTTTTTAAGACATTCGCACAAAAGTTCGCCTACTTTAGCGATTTGTCCTTTTAAAATTTCACTGGCTTGAGCTATTTTTTGATGTTCTTGCCATTCTTTTTCTACTAAACTTATCATTTTTTATCCTTTATTTTTTCTATGATCTTGCTTGTACTAAATCCTTCTTCAAAGTCGATTAATTCAACCTTTGAAACAATATCCGCACCCACAACAATTTTATCTTTATAATCAGCTCCTTTAACCAAAATATCAGGCTTTAAAAAGCTTATAAGTTCCAAAGGCGTATCTTCATCAAAAACTACTACAAAATCTACAAAATAAAAAGCTGCCAACATACAAGCTCTTTGAAACTCTGAATTTACAGGACGACTCTCGCCTTTGAGGCTTTTCACACTCGCATCTGAGTTTAAGCCCACAACCAAAACATCGCCCAATCTTTTAGCTTTCTCAAGATATTTTATATGTCCAAAATGCACTATATCAAAACAACCATTTGTAAAAACGATCTTTTTATCATTTTGTTTTAAAAGTGCCAAAAGTTCTTCTTTGCTTTTGATTTTTTTCTCAAAATCCACGTGCTTAAAACTTTTAATCTCATCAAAACTCACACTCACACTACCTATTTTACTTACCACAACAGCTGCGGCTTCATTGGCAAGTTCGCAAGCTTTAAAAATTTCAATTTCATTTGCCAAACAAAAAGCCAAAACGGCAATCACACTATCGCCCGCCCCTGTTACATCATAAACTTCTAAAGCTTTAGCAGGTGCGATTTTTAAATTCTCATCAAAAAGTGCAATCCCCGCTTCTGAAAGAGTGATGATAGAATAACGCAAAGCAAAATCTTCTTTTAATTTTTTAATCCCTTTTTCTAAATTTTTACCCTCTAAATTTTCAAATTTCAAAGCCTCTAAAGCTTCTTTTTTATTAGGCGTGAGTAGGGTTGCACCACTATATTTACTAAAATCACTCCCCTTAGGATCAACCAAAACAGGGATATTTAAAGCCTTAGCCTTTTCTATCACAGCCTTACAAACTTTAGGGGTTAAAACACCTTTAGCATAATCGCTTAAAACCACAGCCTTAAAGTCTTTAATCTTTTCATCAAACAAAGCAATAAGCTCATTTTCGAGCAAAATTGCACTTGTATCTTCTTCATCTAGTCTTAAAACCTGCTGATTGTGCGCCATAATGCGATTTTTAAAAGGGGTTTTGCGTCCTTTTTGGATCAAAAATTCTCCTTTTAAATTTTCTTGTAAAAATTTCCCACTCTTATCATCACCCACAACACCAAGCGCAAAAACATCAGCTCCCAAGCTTTTTAAATTTGCATAAACATTCGCAGCCCCGCCTAATCTTTTATCTTCTTTAAGAGTTTTAGCTACCAAAACAGGGGCTTCAGGGCTGATACGTGAACAATCACACCAAGTGTAATTATCCACCATAAAATCCCCTATAATTAAAATTTTAGGTTTTTGCTGACTTAAAAACTCAAGCATTTACTTCCTTTTCAAAAAGTCTTTTTATCTCGCCTAAATAATCTTTTATCCCCTCTTCAAGACTAAATTTTGGCTGATAATCCCAAGTTTGATCTAGCTTTGCTTCAGTGTGGAATTGATAAGATTTTACATAAGGATTTGGGATATATTCGCAAGGCAAATCAGTCTTTAACTCTTTTTGCAAAATATCAACTATATCTTGAAAGGTTCTTGCTTTACCACTGCCTACATTATAAACCCCGCATTTTGAATCAAGGGCGATTAAATTGGCACTAATAACATCTTTAATATAAGTAAAATCTCTATAAATTTGATCACTTCCTTCAAACAAGCGTGGATTTTTTCCTGCTAAAATTTGATGGCCAAATTGCAAAACCATAGAAGCGGTTTTGTTTTTATAAAATTCGCCTTTTCCATAAACATTAAAATATCTAAGTCCTACTAAATGGGCTTTATCATAGTATTTTTTCGCTAGCTTATCCATCATCAATTTTGAAAAAGCATAAGGATTTTTTGGTTCTTCATCTTTACCTACGGTTTGTGGACTTTTTGCATCACCATAAACCGAAGCTGAACTTGCATAAATAAGCTTTGCATTAAGATCTATGCTAAGTTCTATAAAGTCTTTAAAAGTATTTAAATTGGTTTGTAAAACCTTAGTTTGATCAAAAACCGTAGTGTCTGAAATTGCTGCTTGATGAAAAATAATCTCTGGTTTAAAATCTTCAATCTTTTTTAAAACTTTTTCATCGTTAATATCGCCTGCAAAAAGCTCTCCATCAAATTCAAGTAAATTTTTAAAATGCCCAAAACTTTGTAAATTTCCATTTTCAAAAGTCGCACTACTACGCATTTTATCTATGATTAAAATTTCATGTTTTTCTTGCAAATTTAAAGCCAGTTGCGAACCTATAAATCCTGCACCACCTGTGATTACTACTCTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_LN831025|1187391:1194359|1189755_1190709_+|WP_002839071.1|DBSCAN-SWA
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFAFRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGASFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDSGPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
>NZ_LN831025|1187391:1194359|1191470_1192031_-|WP_002869012.1|DBSCAN-SWA
MISLVEKEWQEHQKIAQASEILKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVEALGNENDVLIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDDTARIQEMHILIIHTLCQIIDEGF
>NZ_LN831025|1187391:1194359|1188869_1189697_-|WP_002869015.1|DBSCAN-SWA
MPQLSIIIPLFNSCDFILRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTPGACEIAFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDGVFNQKEFLEFLSKQRHFCWSVWAKCFRKDIILKNFEKVKFEKVKIDERLSYGEDVLFCYIYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNEIIKRLSKEFLHDEFHQKLFEVLEREEVGVKNRLK
>NZ_LN831025|1187391:1194359|1192027_1193413_-|WP_002882955.1|DBSCAN-SWA
MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLKSLGADVFALGVVGDDKSGKFLQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSAILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVIEKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGKNLEKGIKKLKEDFALRYSIITLSEAGIALFDENLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIFKACELANEAAAVVVSKIGSVSVSFDEIKSFKHVDFEKKIKSKEELLALLKQNDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVLVVGLNSDASVKSLKGESRPVNSEFQRACMLAAFYFVDFVVVFDEDTPLELISFLKPDILVKGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK
>NZ_LN831025|1187391:1194359|1187391_1188057_+|WP_002869017.1|DBSCAN-SWA
MSLAIIPARGGSKGIKNKNLVLLNNKPLIYYTIKAALNAKSISKVVVSSDSDEILNYAKSQNVDILKRPISLAQDDTTSDKVLLHALKFYKDYEDVVFLQPTSPLRTNIHIDKAFNLYKNSNANALISVSECDNKILKAFVCNDYGDLAGICNDEYPFMPRQKLPKTYMSNGAIYILKIKEFLNNPSFLQNKTKHFLMDESSSLDIDCLEDLKKVEQIWKK
>NZ_LN831025|1187391:1194359|1190715_1191471_-|WP_002869013.1|DBSCAN-SWA
MKVFIINLERSLDRKEHIQKQIQKLFEKNLSLKNKLEFIFFKAIDAKNKEHLEFKDHFPWWGSWVLGRELSDGEKACFASHYKLWQECVKLDEPIIILEDDVEFSDEFLNNGAEYIDELLKSKYEYIRLCYLTQGKMLKLNDNFLFTLDSIGGTQGYLIKPISALKFIDNLKFWIKPVDNVMDMYYYSKVFTITYTPLLLKTTDINSTIEERKKDKRPIFKRIIKEICRLYFIYLKFTYKQKAIKFLRREV
>NZ_LN831025|1187391:1194359|1188044_1188878_+|WP_002882959.1|DBSCAN-SWA
MEKITLKCNKNILNLLKQYNIYTKTYIENPRRFSRLKTKDFITIPLKNNQLESAAGLGIEEYCAFKFSNILHEMGSFSFSGSFLPHYAKVGRYCSIADGVSMFNFQHPIDRISTASFTYETNHSFINDACQNHINKTFPIVNHNPSSSITHLIIQDDVWIGKDVLLKQGITLGTGCVIGQRAVVTKDVPPYAIVAGIPAKIIKYRFDEKTIERLLKIQWWRYHFADFYDIDLNLKINQYLDLLEEKIIKKSISYYNPNKLYFRDILELKSKKIFNLF
>NZ_LN831025|1187391:1194359|1193405_1194359_-|WP_002882954.1|DBSCAN-SWA
MRVVITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTNLNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAKKYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTEAKLDQTWDYQPKFSLEEGIKDYLGEIKRLFEKEVNA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002869017.1|1187391_1188057_+	acylneuraminate cytidylyltransferase family protein	A0A1B1IVD3	uncultured_Mediterranean_phage	7.7e-07	34.2
WP_002882959.1|1188044_1188878_+	CatB-related O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	1.0e-16	38.7
WP_002869015.1|1188869_1189697_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_002839071.1|1189755_1190709_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_002869013.1|1190715_1191471_-	glycosyltransferase family 25 protein	A0A2K9L5B5	Tupanvirus	3.1e-12	39.5
WP_002869012.1|1191470_1192031_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	3.1e-17	38.1
WP_002882955.1|1192027_1193413_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A0K0KVL9	Prochlorococcus_phage	2.5e-23	44.6
WP_002882954.1|1193405_1194359_-	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	1.0e-23	32.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_LN831025|1469797:1476691|DBSCAN-SWA
TTTAAAAATAGCTTTGGTTGCTTGTAAAATTATAATAATCCTCAGGCACGCCAATATCTATAAAATAATCATCAAAAATACAAGCTCTAGCCTTTAGCTTTTTATAATTTTCTTGTAAAAACTCTTCAAAAGAAAATTTTTCCTGCAAAGCAAAATCATTAAAAATATCTTTAGTTAAAAGATAAATTCCACCATTGATTAAACCTTGCTTTTTGAATACCTTTTCCTTAAAGGAAATCACAAGCCCATGCTTATCAATATTTATCGTGCCGTATCTATCAAAATCATTCATTTGCTTTAAGGCAAGACAAATTTTACTTTTATCTAGCTTTAATTTACTTAAATCTATGTCAAAAAAAGTATCGCCGTTTAAAACATAAAGCTCGTTTTTTATAAATTTCAAAGCCTGTTTTATAGCTCCACCTGTTCCTAGAGGCTCTTTTTCGATGCTGTATTTTATTTTTATGCCTAAAAACTCATCTTTAAAATATTCTTGTATCACTTCATATTTGTATGATACTGCTAAGATAATTTCTTTTACGCTTTGTTTTTTAAGATACTTAAAAATAAATTCTAAAAAAGGCTTATCATTTATCGGTGCCATAGGCTTTGGAATGTCTTTTATAACACTTTTAAGTCTTGTTCCTAAGCCGCCACAAAGTATTATTGCTTGCAAGAAAAACCTTTACTGAAAAGCTCTTCTTCGACAATAGCACAAATAATATGTCCTATTAAAATATGTGCTTCTTGAATTCTTGGCGTGCAAGTTGAAGGCACTTTTATACAATAATCACAAAGTTCATTCATAGCCCCGCCATTAGCTCCGCTTAAGCCTATACTTATGATTTCTTTTTGTTTGCAAAGCTCTAAAGCCTTTAAAATATTTTTACTATTTCCACTTGTAGAAATTCCTATAAAAACATCTCCCTTAACTCCTTGAGCTTGCACTTGTCTAGCAAACAAATTTGCATAACCATAATCATTCCCGATAGCTGTTAATACGCTAGTATCTGTCGTAAGTGCAATACTTGCGATCCCTGGTCTATCAAAATAAAACCTACTTACAAATTCCCCTGCGATGTGCTGTGCATCAGCCGCACTACCACCGTTTCCTGCTAATAAAGTTTTGTTACCATTTTTATAAGCTTTTATGACTTCTAATGAAGCATTCTTAATAAGAGTTATTAAATTCTCATCTTTTAAAATTTGCTCTTTTACTAAAATTGATTCTTGAAAATGTCCTTTTATATAGGAATTTAAATTCTCCATGATTTAACTCCCTCTTTTGTAAATGAAAAATCTTGCACATAACCTTGCTCTTTGCTTAAAGCTTTGATTAGGTTGTATTTTTTAGTAGGATCTACAAAGAAAAACATAAATCCACCTGCTCCTGCTCCACTAGTTTTGCCACTATAAGCTCCATTATCTATAGCTAGTTTATAAATTCTTTCAAGCTCATCATTGCTAACGATTTCTGAAATGATTTTTTTTGACTGCCAAGACTTGCCTAAAATTTTCGCCAAAGTATCAAAATCCGCCTTAAATAAAGCTTCTTTCATCTTTATAGCATCTTGTTTTATAGCGTGCATAGCTTCAAGGGATTTTTCATCTCCGAGCTTTCCTTTTTTATGCTCTTCTATATCTTTTGCTTCTCTTGTGATATTTGTAAAATAAAGCACAATTCTAGCTTCAAGCTCACTAGCTATCCAGTTTTTAATACGCAAAGGATTAACGATTACTCTTTTATTATCATAAAATTCCATAAAATTAAAGCCACCAAAAGTTGCGGCGTATTGATCTTGTGCTCCGCCTACTATGCCTAAATCTTCTCTTTCTATCTCATAAGCAAGCTTAGCGATTTCATATTCTCCTAAAGGTAGATTAAGCCATTCTGCAAAAGCCTTTATAACTCCTACAACTAAGGTTGAACTTCCACCTAGCCCACTACCACTTGGTACATCTGAGTATGTATGCAAAGAAAAACTTAAAGGTTTTTTTGTAAAATCTTTTACAATGCGATTATAAATACTTTTAAAAATATCTAATTTTCCATCATCTCCTAAGAATTCTTTACTTTCGTACTCAGAGTAAGAATTTGTATCAGGAGAATCAAAAATGATCTTTCCATCTTCTCTTTCGATCAAAGTGCAATGTATGTATAAAGATATAGTCGCATTTAAAACATAACCTGTGTATTTATCACAATATAAATTTATATCAGTTCCTCCGCCTGCTAGACCGAGACGAAGAGGAGTTTGTGTGCGTATGGTTTTCATCGAATTACTACTTATTTTGCTATAATTTATTATAAAAATTATAGCAAAATATACTTAACTTCTATTAATATCACTTAAACATTTGCAAAGCGATTAACTTTCATCATTTTAAATGCTCTTAAAAGTTCTTCAATGCCATCTTCTAAAGTATTATCTGGTTTCCAACCTGTAGCCTCTAATTTAGCATTTGAAACCAAATAATCTCTTTTATCCGGATCTTCACCTATACTAGCTGAATGGATATAAAAATCAGGAACATACTTTTTAATCGTTTCAGCAAGCTGTCTTTTAGTCAAATTTGCAGAACTTAATCCCATATTATAAGCCTGACCCTTCATCTTATCATAATTCTCAATTCCATGAATAAATCCTTTAACCACATCACGAACATGAATATAATTGCGTCTAAAATGCTCTTCAAAAAGTACTATAAATTTATCTTTATATGCACGATAGGTAAAATCATTAACAAGTAAATCAAGTCTCATTCTAGGTGAAATTCCAAAAACAGTAGCCAAACGAAAAGTTACACAATTTCCTTTATCAAGCAAATATTGCTCCGCATGCACTTTATCAATCCCATATTCTGAGATAGGACGCAAGGGAGATTCTTCAGTGCACATTGCATCTTTTTCTCCTATACCATAACCGCTATTTGTATTGGGATAAATAAATATTTGAGAAGGACTTGCAAAATCGCTTATCATTTTTACAGCTTCATAATTGATCATTTTGGCTAATTTTGGATTTCTTTTGCAAAGTGGAGCTCCAACCAAAGCAGCTAGGGGAATAATAATATCAGCTTTTGCTACCTCTTGTCTAATAAGATTTTCATCCATAGCATCACCATTTATAAAAGTAAAATTTTTATTATGAGAACAAGATAAAAGAGAGATTTGATCAAACATCAAATTATCAATCACACAAACTTCATAACCTTTTTCAAGTAAAATCGGTGTTAAAACCGAACCTATATAACCTGCACCACCTGTAATTAAAACTTTTTTTGACATATTTTTCCTTTAAATCGATGGTTTTATCGATTTAAAGGAATTCTGCCTCTCTTAATTTCATTTCTCCAATGATTTAGCAAATCTTTAAGCATTTGTCTAACAGGAATTTCAGCTTTCCAATCGATAAAACTCTTTATTTTACCATTATCAAACATTTGATAGTCAGCATCAATAGGACGCATCCTATCTTCAACTTGTCTTACCTCAATACCCCCCCCCATATCACTAAAATTTAGCAATATATCTATAACTTCAGGAAGTTTAAAGGCTTCTTCTCCTGCTATATTAAAAGCTTCCCCACAAGGAACTTTTCCTTTTTCACTTTCAAGAGAAAGTAGATAATAAGCCCTTATAGCATCTCTGGCATCTTGAAAAGTTCTTACGCTTGAGAGATTTCCAACCTTGATAACAGGCTCTTGATAACCCGCTTCAATTAAAGCAATTTGTTTTGCAACTGTGCTTTCAAAAAACACATCAGAACGTCTTGGGCCACTATGTGTTCCCATTCTTGTAACAAAAGTGCGAATGTTATAAGCTTCGCCATAAAATCTTCCCAAATAATCAGTGCCAATTTTGCTTATACTGTAAGGACTTGCACCGTGAAAAGCTGTTTCTTCATTAAGCTTAACACCTGCTTTTGCTTTACCATAAACTTCACTTGAAGAGCAAATATGCACTACAGGGTCATATCCATCTTTTGCCTTTAAAATTCTAATGTTTTCCAAAATATTTGCTGTGCCTATTATGTTAGTCTGTAAAGTTTCTATAGGTATATCAAAAGAAGTTTTTGGATAAGACTGAGCTGCTAGGTGAAAAATCACATCAGGCCTTTGACTCTCAAAAAGTTTTTGAAGACTAGAGTAATCATTTAAATCTGCATAAAAAATACTGATTCTATCTTTTTTATTGATCCTATCACTTAAATGATAGATATTATCCATAGGTTCTTGCCAACGCATCATACCTATAACATCATAGTCTGTGTTTTCTAGCAAGAAATCTGCCATTTGAGAACCAACTTGCCCTGTAAATCCTGTAATTAACGCTGTTTTTTTCATGATTTATCCTATTGTCTTATATTTTGCTCTTTTAAATACCATTTATACATCATCTTAATGCCATCTTCAAGTTCAATTTTATGTTTCCAGCCTAAAGAATGAATTTTTGAGCAATCTGTAAATTTCTGCATTGCTCCATCTGGACGATTTAAATTAAAAACTAATTTTCCCTTAAATCCCACTATATTTTTGATTAATTCTGCTAATTCTTTGATAGTGATATTCTTATGTGGGCCTATATTTAAATGAGTATTGATAATCTCAGTATTATCACTTTTTAAATCTTTAAAATCTATATTATTCATAATAAACAAGCAAGCGTTTGCTAAATCTTGACTATGTAAAAATTCTCTTGTCGGTTTTCCGCTACCCCAAATTTCAACATTATCCTTATCTACGCCAAATTTTTTTAAATAATTCTTAGCTTCTTCAATGGAATCAAATTTTAAATCATTTAATAAGTCCTCGTATCGCTTTTCATTTAAAAGCTTGGCTAAATGCATTTTTCTTAAAATTCCAGGCAATACATGAGATTTTTCAAGATCAAATTTGTCATTATTACCATATAAATTTGTAGGAGTGATTGCTATAAAATTTGTATTGTATTGCAAATTATAACTTTCACAAAGCATCAAGCCTGAAATTTTAGCGATTGCGTAAGGTTTGTTAGTATACTCAAGATCTCCACTTAACATTTGCTCTTCACTAGTTGGCAATGTTGCATTTTTAGGATAAACCGTAGTTGAAGCTATGAAAAGTAGCTTTTTTACTTTATGTAAATAAGCATTATGAATAACATTGCACTCTATCATTAAATTTTGATAAATAAAATCAGCACGATAAGTATTATTAGCTAGAATTCCACCTGCTTTAGCTGCTGCTAAAATAACATACTCTGGCTTTTCTCTCTCAAAAAAATCAGCCACAGCTTTTTGATTTGTTAAATCGAGCTCAAAGTGAGTTTTAAAAACAAGATTTTTATAACCTTGTTGCTTAAGTTCATTAAGTATAGCACTACCAACAAGACCACTATGACCCGCTATATAAATTTTAGAATCTTTTTGCATCATTTATCCTTAAAATCTTAATGGAATTTCAGGATTAGATGGCCAAACTGGAAAATCTAAATTTTGCAAATTTCCGCATTCTTTTCTGTAATGTAAACCCTGCATTAAATTTAACTCATTTCTTCTTAGATAACTTACTTCTAAGGTAGTGCTAAAAAATAATCCCTTAGAATAAAAAATCTTTCCGTGATTATTTAAATGTGTATGTATTGGAATAAAATATTCATTAAGTTTTTTTAGTAAACTTATTCTTTTTTCAACCCCATCTTGCTCTTCAGGATTACACCCATGAAATTCAAATATAACTTGTGAAAAATATTTATTTAAAATACTTATATCAATATTTTCAAGCATATCCCATTCACAATTTTCAATATCACATTGCAAAATATTTGGCCTACTCTCATCTAAATTATTATCTTTTAAAGCTTGTGCTAAAGTAATTGTATTTTCGTTGTTTATATTGCCTATAAATTTTTTATGAAAAATAATATTTTCATGACTATAAGGACATTTTTCTATGCTAGCATCATATTCAATTACCTTAAATCCTCTTTGAGCCATTTCCAAATCCCAAGGAGAACTGTCTGAAACACCTAAAGAAAGAGCTTTCGCATCAATATTGCTCATATACCCCCCCCCATTATACATTACATAACCACCATCTCCATTACCACCAATTCTTAGTAAATCATACAAAGGCAGTTCCAAAGGTCGAATAAGATTTAAATAATTTACAATATTCCTATAACACTGCTCATTGTTATTTATGCGAATATAATTTCTATCTCTATCTTGTAATAATAGGAATAAAATTTCTTTATCTCTTTTATCAATATCTAAATTTGAAATAATATTTGACATTAAAATTTGATAAGACAATTGATTACCAACTTTAATATTAACATTTAACTCTTGTAATAATTTTTCCATATTTATCCTTTATTTTTAGTTGCTAAAATATCACGTTCTGAAAGAATAGGAGAATTTGTTGGCCAATCTATACCGATTCTTTCATCATTCCATGCATAAGTAAATTGATCAGGCGCATCCACATAATCTCCTTTATAAGCACATTTATAGTAATAAACTGCACTTTCACTAGTAACATAATGAGCATTTCCAAAACCTGCTGGCACTAAGATGATTTGCTGATTATCTTGATTTATGATGAATTTTTCATACTTTAAATAGGTTGGCGAATCTTTTCTGCAATCTACCACCACCTGATGAATTTCCCCATAAACACAAGTTGCAAGCTTATAAGTTTTTACATCGCCATGGATACCGCGAATAACATTGTGTTTTGAGTGTATAAATTTATCGTGTATAAATTTTAATCCATTTGGTAAAAGCTTATCTACAGCCTTGCTTGTAAAAGCTGTCCAAATTTCACCTCTTAAATCTCTAAATTTATTAGGAGTTATGATATACACTCCCTTTAAAATTTTTGATTCTTGTATATTAAATTCTATTGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_LN831025|1469797:1476691|1473108_1474143_-|WP_002876274.1|DBSCAN-SWA
MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYYLLSLESEKGKVPCGEAFNIAGEEAFKLPEVIDILLNFSDMGGGIEVRQVEDRMRPIDADYQMFDNGKIKSFIDWKAEIPVRQMLKDLLNHWRNEIKRGRIPLNR
>NZ_LN831025|1469797:1476691|1470459_1471065_-|WP_002883705.1|DBSCAN-SWA
MENLNSYIKGHFQESILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSVLTAIGNDYGYANLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFSKGFSCKQ
>NZ_LN831025|1469797:1476691|1469797_1470472_-|WP_002883704.1|DBSCAN-SWA
MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFKYLKKQSVKEIILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKQALKFIKNELYVLNGDTFFDIDLSKLKLDKSKICLALKQMNDFDRYGTINIDKHGLVISFKEKVFKKQGLINGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYNFTSNQSYF
>NZ_LN831025|1469797:1476691|1472146_1473085_-|WP_002860369.1|DBSCAN-SWA
MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCSHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYVPDFYIHSASIGEDPDKRDYLVSNAKLEATGWKPDNTLEDGIEELLRAFKMMKVNRFANV
>NZ_LN831025|1469797:1476691|1474151_1475210_-|WP_002883706.1|DBSCAN-SWA
MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEEQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDKDNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKSDNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGKLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIELEDGIKMMYKWYLKEQNIRQ
>NZ_LN831025|1469797:1476691|1476145_1476691_-|WP_002860364.1|DBSCAN-SWA
MAIEFNIQESKILKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVTSESAVYYYKCAYKGDYVDAPDQFTYAWNDERIGIDWPTNSPILSERDILATKNKG
>NZ_LN831025|1469797:1476691|1475219_1476143_-|WP_002869410.1|DBSCAN-SWA
MEKLLQELNVNIKVGNQLSYQILMSNIISNLDIDKRDKEILFLLLQDRDRNYIRINNNEQCYRNIVNYLNLIRPLELPLYDLLRIGGNGDGGYVMYNGGGYMSNIDAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYSHENIIFHKKFIGNINNENTITLAQALKDNNLDESRPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFIPIHTHLNNHGKIFYSKGLFFSTTLEVSYLRRNELNLMQGLHYRKECGNLQNLDFPVWPSNPEIPLRF
>NZ_LN831025|1469797:1476691|1471052_1472072_-|WP_002876275.1|DBSCAN-SWA
MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLGDDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002883704.1|1469797_1470472_-	nucleotidyltransferase family protein	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	2.1e-07	28.6
WP_002883705.1|1470459_1471065_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	4.1e-15	34.4
WP_002876275.1|1471052_1472072_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	4.6e-59	41.0
WP_002860369.1|1472146_1473085_-	NAD-dependent epimerase/dehydratase	A0A0F7LC08	uncultured_marine_virus	1.4e-73	45.9
WP_002876274.1|1473108_1474143_-	GDP-mannose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	2.3e-143	72.8
WP_002883706.1|1474151_1475210_-	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	2.4e-79	43.8
WP_002869410.1|1475219_1476143_-	FkbM family methyltransferase	NA	NA	NA	NA
WP_002860364.1|1476145_1476691_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	A0A1D7XFA9	Escherichia_phage	1.7e-15	29.6