CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013659	Planococcus rifietoensis strain M8 chromosome, complete genome	2 crisprs	csa3,cas3,DinG,DEDDh	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013659_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013659_1

2195063-2195150

Orphan

Consensus_repeat	Method
AAATTGTGTGGTGCACAGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013659_1

>merge|NZ_CP013659|1|2195063-2195150|CRISPRCasFinder
AAATTGTGTGGTGCACAGGGACAAATGAACATACAAATGCTGCCGCAGCAGGATTTCCGGCCCGCGAATTGTGTGGTGCACAGGGACA

>NZ_CP013659|1|1|2195063-2195150|CRISPRCasFinder
AAATTGTGTGGTGCACAGGGACA	AATGAACATACAAATGCTGCCGCAGCAGGATTTCCGGCCCGC
GAATTGTGTGGTGCACAGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013659.2\|WP_058383164.1\|2198150_2199356_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP013659.2\|WP_058383165.1\|2197153_2197795_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP013659.2\|WP_058383162.1\|2201956_2203906_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP013659.2\|WP_157073489.1\|2189221_2189398_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383171.1\|2189824_2190031_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383160.1\|2204659_2206366_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP013659.2\|WP_157073490.1\|2189394_2189721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383175.1\|2184889_2185339_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP013659.2\|WP_058383163.1\|2199361_2201437_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP013659.2\|WP_174520027.1\|2194218_2195010_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381357
NZ_CP013659.2\|WP_058383167.1\|2195157_2195490_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
NZ_CP013659.2\|WP_058383806.1\|2196597_2197134_-\|6-phospho-3-hexuloisomerase	unknown	unknown	gnl\|CDD\|240138
NZ_CP013659.2\|WP_058383170.1\|2190209_2190947_+\|lipolytic-protein-G-D-S-L-family	unknown	unknown	gnl\|CDD\|239947
NZ_CP013659.2\|WP_058383169.1\|2191113_2193654_-\|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl\|CDD\|225156
NZ_CP013659.2\|WP_058383176.1\|2183985_2184834_-\|M55-family-metallopeptidase	unknown	unknown	gnl\|CDD\|176450
NZ_CP013659.2\|WP_058383161.1\|2204393_2204663_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NZ_CP013659.2\|WP_058383174.1\|2185517_2186639_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238634
NZ_CP013659.2\|WP_058383166.1\|2195549_2196374_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP013659.2\|WP_157073491.1\|2206496_2206667_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383173.1\|2186880_2189187_-\|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl\|CDD\|173810

Protein	Function_ID	Function_description	E-value
NZ_CP013659.2\|WP_058383164.1\|2198150_2199356_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP013659.2\|WP_058383162.1\|2201956_2203906_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP013659.2\|WP_058383160.1\|2204659_2206366_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP013659.2\|WP_174520027.1\|2194218_2195010_+\|aldo/keto-reductase	gnl\|CDD\|381357	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins. Escherichia coli DkgA/YqhE is a founding member of aldo-keto reductase family 5 member C2 (AKR5C2). DkgA/YqhE (EC 1.1.1.274), also called 2,5-DKG reductase A, or 2,5-DKGR A, or 25DKGR-A, or AKR5C, catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). It is also capable of stereoselective -keto ester reductions on ethyl acetoacetate and other 2-substituted derivatives.	5.70688e-161
NZ_CP013659.2\|WP_058383165.1\|2197153_2197795_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	1.54999e-80
NZ_CP013659.2\|WP_058383175.1\|2184889_2185339_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.06828e-15
NZ_CP013659.2\|WP_058383163.1\|2199361_2201437_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	1.24293e-45
NZ_CP013659.2\|WP_058383167.1\|2195157_2195490_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	2.27803e-45
NZ_CP013659.2\|WP_058383806.1\|2196597_2197134_-\|6-phospho-3-hexuloisomerase	gnl\|CDD\|240138	cd05005, SIS_PHI, Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.	2.10999e-73
NZ_CP013659.2\|WP_058383170.1\|2190209_2190947_+\|lipolytic-protein-G-D-S-L-family	gnl\|CDD\|239947	cd04506, SGNH_hydrolase_YpmR_like, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.	1.54767e-16
NZ_CP013659.2\|WP_058383169.1\|2191113_2193654_-\|cell-wall-binding-repeat-containing-protein	gnl\|CDD\|225156	COG2247, LytB, Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane].	2.83912e-26
NZ_CP013659.2\|WP_058383176.1\|2183985_2184834_-\|M55-family-metallopeptidase	gnl\|CDD\|176450	cd08663, DAP_dppA_1, Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized putative peptidases.	1.8242e-126
NZ_CP013659.2\|WP_058383161.1\|2204393_2204663_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	1.36901e-34
NZ_CP013659.2\|WP_058383174.1\|2185517_2186639_+\|amidohydrolase	gnl\|CDD\|238634	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	3.94375e-161
NZ_CP013659.2\|WP_058383166.1\|2195549_2196374_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.04097e-77
NZ_CP013659.2\|WP_058383173.1\|2186880_2189187_-\|cell-wall-binding-repeat-containing-protein	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	7.24947e-86

>NZ_CP013659.2|WP_174520027.1|2194218_2195010_+|aldo/keto-reductase
MPQLGFGVWQVDSDQAAEAVSTALKTGYTSIDTAMIYKNEEGVGKALKETSVPREELFITTKVWNSDQGYDSTLRAFDESLERLGLDYVDLYLIHWPTPEFDNYVETYKAMEKLYKDGRVKAIGVCNFQPEHLQRLLDECDVPPVLNQIECHPYLAQNDVKEFCAQHDIFVEAWSPLDQGGEVLKDEVIQQIAEAHKKSPAQIVLRWHLQNNTIVIPKSVTPSRIEENFNVFDFELSEEDMNQINGLDKNRRKGAHPNEMNVR
>NZ_CP013659.2|WP_058383169.1|2191113_2193654_-|cell-wall-binding-repeat-containing-protein
MKSYSGKRLTLNGSSKLFSVALMAGVLAVSPLSAELSTGKNGISLQQNSAQAAGLADIALLEDQGLRADYNSTTGVLTLDIDGEVLLNVGALNEQYYNFQLPEAFQEILALPNFQDAAQIEYEQRLLLGLIPVNSGTISGDDLEVDPSTGLVSGSSFEALNVSVASTLSAELVIDLNALGEDLPVSDSGELEFFGAVTSSPLVDVFVLTDEGAQASLYNLENTDLSVGTVTDQDTVVEGIKKQGSATEIRVFNGDEEIGSGTVDSDANSPYSVEIPQQQAGTVLTVQAYSSSGDPEGEALEVTVSDVTAPETPDVDGVTDRDTSVTGTGEPGTEVTVTKEDEVIGSGTVDGSGNFEVDIPEQPGGTELGVFLTDDAGLTSEAVVITVEDTIAPDAPDVDDVEEGDTEVTGSGEPGAEVIVTTPDGSYTGEVDEDGNFAVEIPEQEAGTDITVVLEDEDGNASDETVMTVEDVTAPDAPVLDQVTNKSTSVSGTGEAGSTVVIWAGSEELARGEAGSDGAFTLPIDAQDGGTVLTAIAIDNAGNESDEATTTVVKVDAEVTDRIAGSDRYLTAIAISQQGWDASDTVVLATSRNFPDALAGGPLAFQEDAPILLTRPDRLGIETEKEIERLGAEKVILLGSTGAISANVEAELRSMDLTIDRIGGDTRFETATLIAEELESDSAVVANGLNFPDVLSASPYAAKNGVPILLTREDRLPAETEQALDDYSSTHVIGETGVVSEDVFNELPDPTRYGGETRYETGAEIATRLMTGTERAYIATGRDFPDALTGSVLAAKNDSPILLVRPDEIPQATDKLLPNYDDFTIFGGTGAVSDKVKDLLDEELED
>NZ_CP013659.2|WP_058383170.1|2190209_2190947_+|lipolytic-protein-G-D-S-L-family
MKKLIKTIVIVLLASLLASPSVFAKSDNAKESLVAVGDSIPFGFNLGQTNQNPAKTSYPYLIGKLADLRVRNLGVPGWQSDQLLEALQTDQKYRQAIIHSDYVAVTIGNNDLLAILREAAAESGGDQVLFQQLLGAKLNESDVFSNIQQIITEIRSLTDSPVVLYNVYNPFQLTDTLHYAADAVLPTINTAFTALALTNQDVFLADAYTAFGNNQAEYVLPADIHPTKAGQAKLAEIGLGALGLY
>NZ_CP013659.2|WP_058383171.1|2189824_2190031_-|hypothetical-protein
MSKLAAGLIGLIAGVLAGAFLGLVIGGTFLGGLDIHERLGLEGYELAAYLGAVMGGAAGLVFGVRRAG
>NZ_CP013659.2|WP_157073490.1|2189394_2189721_-|hypothetical-protein
MENIDMLGYLIVPLLIVIVVNLVMKYFLKDKKKKDKGFVLLYQRLSYRRRFIRALWGIPFMLLMYFIIYQQEVFTETQLQVVALVFLLTVLFDAGYNYYRWKKEEQTA
>NZ_CP013659.2|WP_157073489.1|2189221_2189398_-|hypothetical-protein
MSGLLVPVHHTIQTASPVPKRRWGAVFKIEQIDFVPVHHTIQLDPHIVEYEMITIRKK
>NZ_CP013659.2|WP_058383173.1|2186880_2189187_-|cell-wall-binding-repeat-containing-protein
MQEFTSHGKQTEGVDNLNTSKKIGITVLTGAAVFHAAGFALAEEANQTDRVIVTLEAGTSSQALTGETVDALNINTANKVVTVEVPEGQSVDDYIEQLGTSPSVANVEADHLLETTAVPNDPYYSFQYHHELIGSERAWTRTMGTTDVLVAVLDNGFDLDHPDLNGQIVSSYATATSISEDDHGTHVAGIIGAAHNNRTYGAGVAPDAGLLAIDVFEDELAYSSDVIEGIYYAADAGADVINMSLGNYFYSESYQKAIDYAHERGVLVIASSGNDFTDKTHYPSGYENVMAVGSTDRADRFSGFSNYGAEQDISAPGTGIWSTIAGGSFGSMSGTSMASPVVAGIAALVKANEPDLSNEEIEQRLYDTAVDLGAAGKDPYFGHGRIDAEAALMIFDIEQPAVSAVYDSSVEINGTLIQAVEDAVITVDNEGGEIARQEGYTGAGKFSMAIPKQAAGSVLTLTIRDRYGNQSEALEVTVKETEADELPGRISGIDRYQTAIAISQTGWESADTVVIATAGNFPDALAGGPLAYLEDAPILLTRSGAIHSETAVEIERLGAEKAIILGGSGAVSEAVEAELAEMNLATERIGGETRYETAAMIAEKLGSRRAVVANGLNFPDVLSVSPYAAKNGIPILLTRSDALPTETASALERYTSSLVIGGTGVVSEDVFGHLPNPERFGGKTRYDTGLEVATRLPLGDSRAFIATGLNFPDALTGSVLAAKNNAPILLVRPDNIPSATEQQLPTYRGFSIFGGTGAVSEDVKGMLK
>NZ_CP013659.2|WP_058383174.1|2185517_2186639_+|amidohydrolase
MIAITNSTIFDGKGRQHEDHSLLIKDGKIEGIFSGQKVPEGYEVIDAAGKMVTPGLIDVHTHLGVAEEGVGKEGQDFNETSSATTPQIRAIDGINPMEKGFDDARRAGVTTVQVMPGSANVIGGEMVVLKTVGHIVDEMVIKSPSGMKAATGENPKRFHGEKGKMPVTRMGVAALIREKLIEAQNYLDSDKKERKLDMENLAKVLKKEIPLRVHAHRADDILTVLRIKREFDIDLTIEHCTEGHHIADYIAGHDVRVSVGPTMSSRSKVELKDKGWHTAKVLLDAGVPCSLTTDHPVVGIEYLVTSAIHAIRHGLGEQQALTALTLDAAKHLGVEDRIGSIEAGKDADLVIWSGNPFDLRSTVEQVFIDGKKI
>NZ_CP013659.2|WP_058383175.1|2184889_2185339_-|Lrp/AsnC-family-transcriptional-regulator
MYYELDELDHGIIKMMSQDGRISFAELSKNLQVTEKTIRLRYKNLLDKEILDVVGIVNPIAVGLKAGAIIQMKVKSRSMQKVIEELKQIPPIRYITVTSGEYPLLVQITVKDQEKITEVVYAITEIEEVTDVNTIIQLDVFKNTFEYIR
>NZ_CP013659.2|WP_058383176.1|2183985_2184834_-|M55-family-metallopeptidase
MKIFISADMEGISGVATNQQLKTPSEYQRFRKLMTADVNAAIEGAISGGAKEIVVADGHGNMSNILIEELDPRARLVSGNNRVMCQLEGLDDSFDGIMFVGHHGREGGSETAVISHTLAGICVNEMKINGEVVGETEMNAYVAGAFGVPPIFTSGDDAYIAEVQETLPNIEAAVTKRAVDRFAAELLHPEEAQKAIRAKAELAVTNAKKHQPLELKGPVTFDIQFKGSQQAMMTTTIPSVEMTGPKSIRFTCEDVVTAYKHMWGCVIIAMTATNGVLGSVNA
>NZ_CP013659.2|WP_058383167.1|2195157_2195490_-|winged-helix-turn-helix-transcriptional-regulator
MPNLGEKTFNCEKELTLSIIGGKWKMLVLWHLGKSGTKRFGELKKLMPGITQRMLVNQLRELEDHLIVHREVYPVVPPKVEYSLTEQGRSLMPILDSMYDWGKGYMERNL
>NZ_CP013659.2|WP_058383166.1|2195549_2196374_-|Cof-type-HAD-IIB-family-hydrolase
MYKMIAIDLDGTLLTDELTVTTDTMTAIRESMEHGVVVTIATGRMYPSAQRIALELGLDAPMITYQGAMIKSATSGEVLRERVVPFEIAQKCIHLAAEKQMHIQVYQDDVLYSAVDNEQVRAYSKEVGVGYEIEPDLLKLAKNGFMKLLFIDEPEALAPVQEELQAVLGDEACIEKSKLRYLEVTHPEANKGSALKFLAEHLGIDSSEVIGIGDNHNDTDLVKAAGFGIAMGNAVDELKELADYTSLSNNEEGVLHVLNKFILEPRTAAVDSGQ
>NZ_CP013659.2|WP_058383806.1|2196597_2197134_-|6-phospho-3-hexuloisomerase
MNEISAELAHTVGQVDEAEASRLVTAMGQADKIFVAGGGRSGFMAKAFVMRMVHMGLTAYVVGETVTPSLQENDLFIVGSGSGETGSLLAMMEKANAIGATVAAVTTNPASSIGKLASLHLTIPAQAKAEGASGKSIQPMGSLFEQSLLVVYDALVLAYMEQHHITADTMFGTHANLE
>NZ_CP013659.2|WP_058383165.1|2197153_2197795_-|3-hexulose-6-phosphate-synthase
MKLQLALDLVDIPQAIELIKEVEGSIDIVELGTPVINQEGLKAVREVKAAFPHLEVLADVKIMDAAAYEVGNAAAAGADIVTILAQAEDSSIKGAVEEAKKLGKKILVDMIAVKDIETRAAELDVLGADYICVHTGYDLQAEGKDSFADLRTIKGVVKNAKTAIAGGIKLETLPEVIKAQPDLIIVGGGITSKDDKQSEAAKIKALMNESVTV
>NZ_CP013659.2|WP_058383164.1|2198150_2199356_-|mannitol-1-phosphate-5-dehydrogenase
MKQAIHFGAGNIGRGFIGALFSESGYHVSFVDVAEQVIDGLNAQGQYRVNMAQETEESVLVENVSGINNMKDEEAVIAKIQQATYLTTAIGPNILPRIAPLIAKGIEARVKGNFATGPDLVPASDLDVATDMSAGSEKLYIIACENQIGATDILKGHILSHLSDEAKADLAGKVYFFNSAVDRIVPIQEGHSLDVLVEPYYEWVVETTEDIPHVTGMTIVEDLAPFIERKLFTVNTGHAVIAYYGYLAGKTTIDETLADPEIEQEVRETLKETGAYLVKQYGLDEDEHLDYIDKNIERFKNSYLNDGVTRVGRAPIRKLGPEDRLVRPAVQAQKAGLAYSHLAKAIAAALLFDYAEDEEAVKIQEMIAQGGPERVLTEVSGLEADSELAKEVVRQYEAMKK
>NZ_CP013659.2|WP_058383163.1|2199361_2201437_-|BglG-family-transcription-antiterminator
MFVTVREKSIIELVTRMSAKHTVNSLATYLDVSARTIQRDLKSVDKLLEGFGLAMKRNAADALFIDGNNEKIYRLMQKLAASSAPEATPEEKKLRLLIILMEEGAFFKKQVLSNQLGISTTTLTSYLDELGNWLRKFSVTLSRQRGVGVEVAGEEAHKRHALAAYFLIHFYEELIESLYYLQRGKTQDDKVLGYFNPDYLASANKLVGEHISDEQIRLADSGYTGLVVHLALALRRTENGFLLDAQPAGSEPNGEYHVIEAICDDLHERLGVELTERDIEFLAVVLKGSKIQASNVLYYDSVLLGKLVKNMIRDVSGQLGVDLTKDFSLYQGLLAHMEPLIFRLKQKLESFNPLTDEIKKKYPMLFLAVKQTLETEFDDLEFSADEVAFIVLHFGSALLMNEERVQIDAVVVCPTGIGTSKMLASRIQKELPEIDTVKILSIHDFQTANFQDYDLVISTIRLPVTDVDYLMVSPLLNEQDISHIENYLQHNIQKVTRNKQYLPAEDFGEAGRKHRPDLRRLLLDIKQVQTGMEAILEHFGVVNMRGTDYWGVLSDVLDGLESDGLLDAASTLRQLQDRETKGGLGIPGTNMALFHCRDESVGQLLFQVVHLDAPSAVKGMDGRDVHMTNLLLMLTPVELSEREQEIMSLISSSLIESEAAMMIFSSSNEGVIRGKLEELFYEYLQNNLMKE
>NZ_CP013659.2|WP_058383162.1|2201956_2203906_-|PTS-mannitol-transporter-subunit-IICBA
MAQERSSVKVKVQKFGNFLSSMVMPNIGAFIAWGLITALFIPTGFFPNENFASLVGPMITYLLPLLIGYTGGKLVHDQRGGVIGAIATMGVIVGAPDTPMFLGAMIMGPLAAWVIKQFDHLIEGKIRSGFEMLVNNFSAGILGGALAIFAYLGIGPAVSALTQVLVAGVDWLLETGLLPLTSILIEPGKILFLNNAINHGILTPLGLEQVQQAGRSVLFLLEANPGPGLGVLLAFMFFGKGIAKQSAPGAVIIHFFGGIHEIYFPYVLMKPMLLLSVILGGMSGVFTLVLMGGGLMAPASPGSIFAIAAVTPPEGMAYVANFTAILVAATVSFLISAVILKRSKDTASDEDVEAATKRMEEMKGKKSSVAGALGASAGAGAAGTASASGKFPDDVQKIVFACDAGMGSSAMGASLLSKKVKEAGMHIKVTNSAISSIPADSQIIITQDKLTPRAKDKRPDAYHISVDNFLSSPEYDRLIERMKHGVTEEQSELVDDSEANAATGDEGDAPLLTEDNIFINKRFRNKEEAIRFAGDALVKAGYVEPSYVDEMLKREEITTTYMGNDVAIPHGTEEAKKAVIKSGFTVVQVPDGVDFDGEKAKLIFAIAGKDGTHLEILSGIAVICAEQSNVDELVAAKSSKELLDILNSK
>NZ_CP013659.2|WP_058383161.1|2204393_2204663_+|phosphocarrier-protein-HPr
MVEKSFTITDPAGMHARPASALVGSLSKFQSDITMEFKDKKVNLKSILGVMSLGVPSGSTVQIAADGADEAEAMETIERVLQEQGISNE
>NZ_CP013659.2|WP_058383160.1|2204659_2206366_+|phosphoenolpyruvate--protein-phosphotransferase
MNRISGIAASNGIAIAKAFRLENPELTIDKKNVADTQAEIQRFGQAVNESIAELEVIKKRTAEEISDKEAAIFGAHLLVLEDPELIGPITDKINNDSVNAEFALHETSTMFVDMFEAMDNEYMKERAADVRDVTKRVLAHLLGVKIQNPSMITDEVVVIAEDLTPSDTVQLNPKYIKGFITDIGGRTSHSAILARTLEIPAVVGAKSAMSSIDNGTIVIIDGLEGEILLNPDDATLAEYKEKQTAFASQKAEWAKLKNEATLTKDGVAVELGANIGTPKDLTGVLENGGEAIGLYRTEFLYMGRDEFPTEEEQFDAYSAVLKGMENKPTVVRTLDIGGDKELSYLKLPKELNPFLGLRAIRLCLEMPDMFRTQLRALLRASVHGNLKIMFPMIATLDEFREAKAILLEEKAKLEAEGVEVSDSIEVGIMVEIPSTAVMADTFAKEVDFFSIGTNDLIQYTMAADRMNESVSYLYQPYNPAILRLVKTVIDASHKEGKWTGMCGEMAGDEIAIPILLGLGLDEFSMSASSILKARSQLSRLSKADMEGHTEHILGLATSQEVEDYVKNL
>NZ_CP013659.2|WP_157073491.1|2206496_2206667_-|hypothetical-protein
MTAIVKEEMTMEIPNKTYLQTYKDYIDGYRQYKLEKLAPQWHVPVDRKVVKVERGL

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Crispr_ID: NZ_CP013659_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013659_2

2204049-2204257

Orphan

Consensus_repeat	Method
TGTGTCGTGCACAGGGACA	CRT

3 spacers

The CRISPR arrays of NZ_CP013659_2

>merge|NZ_CP013659|2|2204049-2204257|CRT
TTTGTCGTGCACAGGGACGAACCAAGAGCGAAATCCTGCTGCGACGCGAATCTGATGCGCCAAACTGTGTGATGCACAGGGACACAACCGAAAAACAATCGCCAAGCCCTATTACCCGCGCAAATTGTGTCGCGCACAGGGACAAACTACCATCAAAACCCCGACACGACGCGGTTTTCACGTCCCGAATTGTGCCGTGCACAGGGACA

>NZ_CP013659|2|1|2204049-2204257|CRT
TTTGTCGTGCACAGGGACG	AACCAAGAGCGAAATCCTGCTGCGACGCGAATCTGATGCGCCAAAC
TGTGTGATGCACAGGGACA	CAACCGAAAAACAATCGCCAAGCCCTATTACCCGCGCAAAT
TGTGTCGCGCACAGGGACA	AACTACCATCAAAACCCCGACACGACGCGGTTTTCACGTCCCGAAT
TGTGCCGTGCACAGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013659.2\|WP_058383164.1\|2198150_2199356_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP013659.2\|WP_058383153.1\|2212378_2212996_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_CP013659.2\|WP_058383162.1\|2201956_2203906_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP013659.2\|WP_058383160.1\|2204659_2206366_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP013659.2\|WP_058383157.1\|2209793_2210303_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180687
NZ_CP013659.2\|WP_058383158.1\|2207993_2209412_-\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_CP013659.2\|WP_174520027.1\|2194218_2195010_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381357
NZ_CP013659.2\|WP_058383156.1\|2210587_2211361_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383155.1\|2211394_2211868_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP013659.2\|WP_058383165.1\|2197153_2197795_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP013659.2\|WP_058383163.1\|2199361_2201437_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP013659.2\|WP_058383167.1\|2195157_2195490_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
NZ_CP013659.2\|WP_058383806.1\|2196597_2197134_-\|6-phospho-3-hexuloisomerase	unknown	unknown	gnl\|CDD\|240138
NZ_CP013659.2\|WP_058383170.1\|2190209_2190947_+\|lipolytic-protein-G-D-S-L-family	unknown	unknown	gnl\|CDD\|239947
NZ_CP013659.2\|WP_058383169.1\|2191113_2193654_-\|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl\|CDD\|225156
NZ_CP013659.2\|WP_058383161.1\|2204393_2204663_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NZ_CP013659.2\|WP_157073492.1\|2206806_2207226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383166.1\|2195549_2196374_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP013659.2\|WP_157073491.1\|2206496_2206667_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013659.2\|WP_058383154.1\|2211932_2212265_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226318

Protein	Function_ID	Function_description	E-value
NZ_CP013659.2\|WP_058383164.1\|2198150_2199356_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP013659.2\|WP_058383153.1\|2212378_2212996_-\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	1.80711e-31
NZ_CP013659.2\|WP_058383162.1\|2201956_2203906_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP013659.2\|WP_058383160.1\|2204659_2206366_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP013659.2\|WP_058383157.1\|2209793_2210303_-\|hypothetical-protein	gnl\|CDD\|180687	PRK06770, PRK06770, hypothetical protein; Provisional.	3.29223e-29
NZ_CP013659.2\|WP_058383158.1\|2207993_2209412_-\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	6.09664e-178
NZ_CP013659.2\|WP_174520027.1\|2194218_2195010_+\|aldo/keto-reductase	gnl\|CDD\|381357	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins. Escherichia coli DkgA/YqhE is a founding member of aldo-keto reductase family 5 member C2 (AKR5C2). DkgA/YqhE (EC 1.1.1.274), also called 2,5-DKG reductase A, or 2,5-DKGR A, or 25DKGR-A, or AKR5C, catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). It is also capable of stereoselective -keto ester reductions on ethyl acetoacetate and other 2-substituted derivatives.	5.70688e-161
NZ_CP013659.2\|WP_058383155.1\|2211394_2211868_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	0.00319227
NZ_CP013659.2\|WP_058383165.1\|2197153_2197795_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	1.54999e-80
NZ_CP013659.2\|WP_058383163.1\|2199361_2201437_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	1.24293e-45
NZ_CP013659.2\|WP_058383167.1\|2195157_2195490_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	2.27803e-45
NZ_CP013659.2\|WP_058383806.1\|2196597_2197134_-\|6-phospho-3-hexuloisomerase	gnl\|CDD\|240138	cd05005, SIS_PHI, Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.	2.10999e-73
NZ_CP013659.2\|WP_058383170.1\|2190209_2190947_+\|lipolytic-protein-G-D-S-L-family	gnl\|CDD\|239947	cd04506, SGNH_hydrolase_YpmR_like, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.	1.54767e-16
NZ_CP013659.2\|WP_058383169.1\|2191113_2193654_-\|cell-wall-binding-repeat-containing-protein	gnl\|CDD\|225156	COG2247, LytB, Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane].	2.83912e-26
NZ_CP013659.2\|WP_058383161.1\|2204393_2204663_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	1.36901e-34
NZ_CP013659.2\|WP_058383166.1\|2195549_2196374_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.04097e-77
NZ_CP013659.2\|WP_058383154.1\|2211932_2212265_-\|hypothetical-protein	gnl\|CDD\|226318	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown].	1.81217e-08

>NZ_CP013659.2|WP_058383162.1|2201956_2203906_-|PTS-mannitol-transporter-subunit-IICBA
MAQERSSVKVKVQKFGNFLSSMVMPNIGAFIAWGLITALFIPTGFFPNENFASLVGPMITYLLPLLIGYTGGKLVHDQRGGVIGAIATMGVIVGAPDTPMFLGAMIMGPLAAWVIKQFDHLIEGKIRSGFEMLVNNFSAGILGGALAIFAYLGIGPAVSALTQVLVAGVDWLLETGLLPLTSILIEPGKILFLNNAINHGILTPLGLEQVQQAGRSVLFLLEANPGPGLGVLLAFMFFGKGIAKQSAPGAVIIHFFGGIHEIYFPYVLMKPMLLLSVILGGMSGVFTLVLMGGGLMAPASPGSIFAIAAVTPPEGMAYVANFTAILVAATVSFLISAVILKRSKDTASDEDVEAATKRMEEMKGKKSSVAGALGASAGAGAAGTASASGKFPDDVQKIVFACDAGMGSSAMGASLLSKKVKEAGMHIKVTNSAISSIPADSQIIITQDKLTPRAKDKRPDAYHISVDNFLSSPEYDRLIERMKHGVTEEQSELVDDSEANAATGDEGDAPLLTEDNIFINKRFRNKEEAIRFAGDALVKAGYVEPSYVDEMLKREEITTTYMGNDVAIPHGTEEAKKAVIKSGFTVVQVPDGVDFDGEKAKLIFAIAGKDGTHLEILSGIAVICAEQSNVDELVAAKSSKELLDILNSK
>NZ_CP013659.2|WP_058383163.1|2199361_2201437_-|BglG-family-transcription-antiterminator
MFVTVREKSIIELVTRMSAKHTVNSLATYLDVSARTIQRDLKSVDKLLEGFGLAMKRNAADALFIDGNNEKIYRLMQKLAASSAPEATPEEKKLRLLIILMEEGAFFKKQVLSNQLGISTTTLTSYLDELGNWLRKFSVTLSRQRGVGVEVAGEEAHKRHALAAYFLIHFYEELIESLYYLQRGKTQDDKVLGYFNPDYLASANKLVGEHISDEQIRLADSGYTGLVVHLALALRRTENGFLLDAQPAGSEPNGEYHVIEAICDDLHERLGVELTERDIEFLAVVLKGSKIQASNVLYYDSVLLGKLVKNMIRDVSGQLGVDLTKDFSLYQGLLAHMEPLIFRLKQKLESFNPLTDEIKKKYPMLFLAVKQTLETEFDDLEFSADEVAFIVLHFGSALLMNEERVQIDAVVVCPTGIGTSKMLASRIQKELPEIDTVKILSIHDFQTANFQDYDLVISTIRLPVTDVDYLMVSPLLNEQDISHIENYLQHNIQKVTRNKQYLPAEDFGEAGRKHRPDLRRLLLDIKQVQTGMEAILEHFGVVNMRGTDYWGVLSDVLDGLESDGLLDAASTLRQLQDRETKGGLGIPGTNMALFHCRDESVGQLLFQVVHLDAPSAVKGMDGRDVHMTNLLLMLTPVELSEREQEIMSLISSSLIESEAAMMIFSSSNEGVIRGKLEELFYEYLQNNLMKE
>NZ_CP013659.2|WP_058383164.1|2198150_2199356_-|mannitol-1-phosphate-5-dehydrogenase
MKQAIHFGAGNIGRGFIGALFSESGYHVSFVDVAEQVIDGLNAQGQYRVNMAQETEESVLVENVSGINNMKDEEAVIAKIQQATYLTTAIGPNILPRIAPLIAKGIEARVKGNFATGPDLVPASDLDVATDMSAGSEKLYIIACENQIGATDILKGHILSHLSDEAKADLAGKVYFFNSAVDRIVPIQEGHSLDVLVEPYYEWVVETTEDIPHVTGMTIVEDLAPFIERKLFTVNTGHAVIAYYGYLAGKTTIDETLADPEIEQEVRETLKETGAYLVKQYGLDEDEHLDYIDKNIERFKNSYLNDGVTRVGRAPIRKLGPEDRLVRPAVQAQKAGLAYSHLAKAIAAALLFDYAEDEEAVKIQEMIAQGGPERVLTEVSGLEADSELAKEVVRQYEAMKK
>NZ_CP013659.2|WP_058383165.1|2197153_2197795_-|3-hexulose-6-phosphate-synthase
MKLQLALDLVDIPQAIELIKEVEGSIDIVELGTPVINQEGLKAVREVKAAFPHLEVLADVKIMDAAAYEVGNAAAAGADIVTILAQAEDSSIKGAVEEAKKLGKKILVDMIAVKDIETRAAELDVLGADYICVHTGYDLQAEGKDSFADLRTIKGVVKNAKTAIAGGIKLETLPEVIKAQPDLIIVGGGITSKDDKQSEAAKIKALMNESVTV
>NZ_CP013659.2|WP_058383806.1|2196597_2197134_-|6-phospho-3-hexuloisomerase
MNEISAELAHTVGQVDEAEASRLVTAMGQADKIFVAGGGRSGFMAKAFVMRMVHMGLTAYVVGETVTPSLQENDLFIVGSGSGETGSLLAMMEKANAIGATVAAVTTNPASSIGKLASLHLTIPAQAKAEGASGKSIQPMGSLFEQSLLVVYDALVLAYMEQHHITADTMFGTHANLE
>NZ_CP013659.2|WP_058383166.1|2195549_2196374_-|Cof-type-HAD-IIB-family-hydrolase
MYKMIAIDLDGTLLTDELTVTTDTMTAIRESMEHGVVVTIATGRMYPSAQRIALELGLDAPMITYQGAMIKSATSGEVLRERVVPFEIAQKCIHLAAEKQMHIQVYQDDVLYSAVDNEQVRAYSKEVGVGYEIEPDLLKLAKNGFMKLLFIDEPEALAPVQEELQAVLGDEACIEKSKLRYLEVTHPEANKGSALKFLAEHLGIDSSEVIGIGDNHNDTDLVKAAGFGIAMGNAVDELKELADYTSLSNNEEGVLHVLNKFILEPRTAAVDSGQ
>NZ_CP013659.2|WP_058383167.1|2195157_2195490_-|winged-helix-turn-helix-transcriptional-regulator
MPNLGEKTFNCEKELTLSIIGGKWKMLVLWHLGKSGTKRFGELKKLMPGITQRMLVNQLRELEDHLIVHREVYPVVPPKVEYSLTEQGRSLMPILDSMYDWGKGYMERNL
>NZ_CP013659.2|WP_174520027.1|2194218_2195010_+|aldo/keto-reductase
MPQLGFGVWQVDSDQAAEAVSTALKTGYTSIDTAMIYKNEEGVGKALKETSVPREELFITTKVWNSDQGYDSTLRAFDESLERLGLDYVDLYLIHWPTPEFDNYVETYKAMEKLYKDGRVKAIGVCNFQPEHLQRLLDECDVPPVLNQIECHPYLAQNDVKEFCAQHDIFVEAWSPLDQGGEVLKDEVIQQIAEAHKKSPAQIVLRWHLQNNTIVIPKSVTPSRIEENFNVFDFELSEEDMNQINGLDKNRRKGAHPNEMNVR
>NZ_CP013659.2|WP_058383169.1|2191113_2193654_-|cell-wall-binding-repeat-containing-protein
MKSYSGKRLTLNGSSKLFSVALMAGVLAVSPLSAELSTGKNGISLQQNSAQAAGLADIALLEDQGLRADYNSTTGVLTLDIDGEVLLNVGALNEQYYNFQLPEAFQEILALPNFQDAAQIEYEQRLLLGLIPVNSGTISGDDLEVDPSTGLVSGSSFEALNVSVASTLSAELVIDLNALGEDLPVSDSGELEFFGAVTSSPLVDVFVLTDEGAQASLYNLENTDLSVGTVTDQDTVVEGIKKQGSATEIRVFNGDEEIGSGTVDSDANSPYSVEIPQQQAGTVLTVQAYSSSGDPEGEALEVTVSDVTAPETPDVDGVTDRDTSVTGTGEPGTEVTVTKEDEVIGSGTVDGSGNFEVDIPEQPGGTELGVFLTDDAGLTSEAVVITVEDTIAPDAPDVDDVEEGDTEVTGSGEPGAEVIVTTPDGSYTGEVDEDGNFAVEIPEQEAGTDITVVLEDEDGNASDETVMTVEDVTAPDAPVLDQVTNKSTSVSGTGEAGSTVVIWAGSEELARGEAGSDGAFTLPIDAQDGGTVLTAIAIDNAGNESDEATTTVVKVDAEVTDRIAGSDRYLTAIAISQQGWDASDTVVLATSRNFPDALAGGPLAFQEDAPILLTRPDRLGIETEKEIERLGAEKVILLGSTGAISANVEAELRSMDLTIDRIGGDTRFETATLIAEELESDSAVVANGLNFPDVLSASPYAAKNGVPILLTREDRLPAETEQALDDYSSTHVIGETGVVSEDVFNELPDPTRYGGETRYETGAEIATRLMTGTERAYIATGRDFPDALTGSVLAAKNDSPILLVRPDEIPQATDKLLPNYDDFTIFGGTGAVSDKVKDLLDEELED
>NZ_CP013659.2|WP_058383170.1|2190209_2190947_+|lipolytic-protein-G-D-S-L-family
MKKLIKTIVIVLLASLLASPSVFAKSDNAKESLVAVGDSIPFGFNLGQTNQNPAKTSYPYLIGKLADLRVRNLGVPGWQSDQLLEALQTDQKYRQAIIHSDYVAVTIGNNDLLAILREAAAESGGDQVLFQQLLGAKLNESDVFSNIQQIITEIRSLTDSPVVLYNVYNPFQLTDTLHYAADAVLPTINTAFTALALTNQDVFLADAYTAFGNNQAEYVLPADIHPTKAGQAKLAEIGLGALGLY
>NZ_CP013659.2|WP_058383161.1|2204393_2204663_+|phosphocarrier-protein-HPr
MVEKSFTITDPAGMHARPASALVGSLSKFQSDITMEFKDKKVNLKSILGVMSLGVPSGSTVQIAADGADEAEAMETIERVLQEQGISNE
>NZ_CP013659.2|WP_058383160.1|2204659_2206366_+|phosphoenolpyruvate--protein-phosphotransferase
MNRISGIAASNGIAIAKAFRLENPELTIDKKNVADTQAEIQRFGQAVNESIAELEVIKKRTAEEISDKEAAIFGAHLLVLEDPELIGPITDKINNDSVNAEFALHETSTMFVDMFEAMDNEYMKERAADVRDVTKRVLAHLLGVKIQNPSMITDEVVVIAEDLTPSDTVQLNPKYIKGFITDIGGRTSHSAILARTLEIPAVVGAKSAMSSIDNGTIVIIDGLEGEILLNPDDATLAEYKEKQTAFASQKAEWAKLKNEATLTKDGVAVELGANIGTPKDLTGVLENGGEAIGLYRTEFLYMGRDEFPTEEEQFDAYSAVLKGMENKPTVVRTLDIGGDKELSYLKLPKELNPFLGLRAIRLCLEMPDMFRTQLRALLRASVHGNLKIMFPMIATLDEFREAKAILLEEKAKLEAEGVEVSDSIEVGIMVEIPSTAVMADTFAKEVDFFSIGTNDLIQYTMAADRMNESVSYLYQPYNPAILRLVKTVIDASHKEGKWTGMCGEMAGDEIAIPILLGLGLDEFSMSASSILKARSQLSRLSKADMEGHTEHILGLATSQEVEDYVKNL
>NZ_CP013659.2|WP_157073491.1|2206496_2206667_-|hypothetical-protein
MTAIVKEEMTMEIPNKTYLQTYKDYIDGYRQYKLEKLAPQWHVPVDRKVVKVERGL
>NZ_CP013659.2|WP_157073492.1|2206806_2207226_-|hypothetical-protein
MVDMMNTQQVTSLDDKIAKMMAAQAVEKTRNCPLGSAPEIAGHQVPQLYIGLPLDRGVSVQLYRDEQEGMNEATILLSVEQLPSFTRALIEHPILLPTSYSQRLSVEDGQHALRITSKEEFPDFVERLTDALHVLPRKK
>NZ_CP013659.2|WP_058383158.1|2207993_2209412_-|sodium:alanine-symporter-family-protein
MEQFLQGVADFSAWLWGIPLITLLLVSGLYMTFKLGFFQFRYFGYIVGQTFGSIFRRPKGEGTVTPFQALTSALSSTIGAANIVGVPAAIMFGGPGAIFWMWVIALIGMALKFAESVLAVEYREKNAKGEFVGGPMYYMTKGLNMKWLGIWFSFALMIELIPSIMVQGNSIANTVQATFNIPVLWTGIATAVLVSIVVFGGIKRIGKVTEIFVPFMALFYVGGAVVILLMNVQAVPEFFMLIFSNAFSPAPVVGGFAGAAIVEIIRWGFARGLYSNEAGLGTAPIAHAAATTDHPVRQGFWAVIGVVVDTLIVCTATAFVILSSGVWTEEGAMENSSALTSLAFEEFFGDFGAILVTVALIFFVLSTILVVVFYGAKQAEFLFGLKAAHGMQVVYIFAVILGAVGAAEVIWGFLDIMLAAILIPNVIAILLLSNKVKDLKNEFFTSDEYYRKDRKVKKRAKRQKAVREGYES
>NZ_CP013659.2|WP_058383157.1|2209793_2210303_-|hypothetical-protein
MKTVLRTIIILLVGLAILAGAGYWAYKSLTESDEQQISQAAEEADEKLQEDTEPPKANETVETVGLSEVEFQIHLHQMTHQKIEATEKRGAIEMTPERIDEMLKILQANEGAYEEYEFYEQSLTAWEEGNFSNAVNVHNTIWEWHNGTVGRATGLLSEEQEASYVESNF
>NZ_CP013659.2|WP_058383156.1|2210587_2211361_+|hypothetical-protein
MTPKKRNRLIIGLILLGLSLPPLTPMLMEIAYRTEMNIRYDIDELNADYAGAPDDTDYNGNIIRASHVETGEPYFDDQDELVHPSDIRLTVNGETVETLEDYPVQLLDSGDIAVEGLNRYTHYLTYWTVEDKFTDQDFFAIVIWQNGYDTRQIDEDGWMEGYVDLEQLEYKLITIAKDGTVSEELFTFENKSKLQTQLITEDYSGPINYYLPPGYYYPSLLYPLLYPWITSIVGIALILFNFPYGALKKRRAKKDAH
>NZ_CP013659.2|WP_058383155.1|2211394_2211868_+|VanZ-family-protein
MKAKYIPVLLWALCILVATNNYNFTALLANDIDFNIRLFPNLSDLFITSDIHLDSKLYVFQKTGHALSFGILYLLMNQALKERHVAFVLCSMFAFFTEFLQLFFERSGRLADVLIDIAGIYVAYRVSLYVKAQGGIVPAFSHATQTISNVLKDDKTH
>NZ_CP013659.2|WP_058383154.1|2211932_2212265_-|hypothetical-protein
MKFLCLAYGDEAGWNGLSDSEKKETLAQDKVIEERGNLMSAVQPTVTAVRNWDQKLHVTEGIEETHDLPLAGFSIIEAANVEEVIALVANTPCARANGVIEIRQLWNTSS
>NZ_CP013659.2|WP_058383153.1|2212378_2212996_-|HAD-family-hydrolase
MDSIIFDLDGTLWNPLEVSVAVWNKVLADNGVDEQLTKDDLRGIMGLQADQVGEKLFPHLSKEKCEKLTEESSELECVHLRQQGGELYAGVEDVSERLSQKYKLYIVSNCQEGYIESFYEYHALDKHFTDFENPGRTGLSKGKNIQLIMERNDVAKAVYVGDTKGDHEAAKMAGLPFVYAAYGFGDVDEYDYVIEEFGELLKLFG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

671936 : 681695

Synechococcus_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058381413.1\|671936_673232_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.9e-17	31.3
WP_058381412.1\|673247_673961_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FUQ7	Synechococcus_phage	1.8e-46	42.4
WP_058381411.1\|673960_674215_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A1B1IU82	uncultured_Mediterranean_phage	3.6e-05	40.0
WP_058381410.1\|674211_674895_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_058381409.1\|674878_677104_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	9.1e-161	42.8
WP_058381408.1\|677079_678501_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-54	34.5
WP_058381407.1\|678512_679574_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	7.1e-63	44.7
WP_058381406.1\|679563_680148_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.7e-23	33.7
WP_058381405.1\|680159_681695_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.0e-75	50.3

DBSCAN-SWA_2

967501 : 976675

Staphylococcus_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058381161.1\|967501_968932_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.5e-63	30.5
WP_058381160.1\|968922_969984_+	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_058381159.1\|970013_971039_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_058381158.1\|971147_971378_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.5e-22	66.7
WP_058381157.1\|971489_971936_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	1.1e-46	63.7
WP_058381156.1\|972003_972456_+	NUDIX domain-containing protein	A0A2H4PQM4	Staphylococcus_phage	6.6e-18	35.3
WP_058383662.1\|972466_973261_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	8.9e-34	36.2
WP_058381155.1\|973336_974926_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	3.2e-192	64.1
WP_058381154.1\|975478_976675_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.4e-162	75.3

DBSCAN-SWA_3

1690997 : 1767318

uncultured_Caudovirales_phage(15.0%)

head,tail,portal,holin,terminase,protease,tRNA,integrase

attL 1709243:1709259|attR 1772735:1772751

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058380475.1\|1690997_1691927_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_058380474.1\|1692020_1692374_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_058380473.1\|1692392_1692671_-	DUF503 domain-containing protein	NA	NA	NA	NA
WP_058380472.1\|1692667_1695004_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	9.3e-23	25.0
WP_058380471.1\|1695018_1695327_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_058380470.1\|1695323_1695605_-	YlxR family protein	NA	NA	NA	NA
WP_058380469.1\|1695624_1696752_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_058380468.1\|1696778_1697258_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_058380467.1\|1697384_1701692_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	6.1e-20	37.3
WP_058380466.1\|1701772_1703476_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_058380465.1\|1703562_1704822_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_058380464.1\|1704866_1706009_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_058380463.1\|1706027_1706819_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_058380462.1\|1706815_1707610_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.3e-21	39.3
WP_058380461.1\|1707762_1708320_-	ribosome recycling factor	NA	NA	NA	NA
WP_058380460.1\|1708319_1709045_-	UMP kinase	NA	NA	NA	NA
WP_058380459.1\|1709124_1710009_-	elongation factor Ts	NA	NA	NA	NA
1709243:1709259	attL	NA	NA	NA	NA
WP_058380458.1\|1710097_1710814_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_058380457.1\|1711073_1711853_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_058380456.1\|1711948_1713346_-	HslU--HslV peptidase ATPase subunit	A0A2H5BJT2	Erwinia_phage	1.9e-39	26.6
WP_058380455.1\|1713342_1713891_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_058380454.1\|1713907_1714801_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	6.0e-31	29.7
WP_058380453.1\|1714870_1716181_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_058380452.1\|1716201_1718271_-	type I DNA topoisomerase	A0A2K9L1Q2	Tupanvirus	6.2e-103	38.2
WP_058380451.1\|1718380_1719268_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	2.1e-23	36.3
WP_058380450.1\|1719350_1720094_-	hypothetical protein	NA	NA	NA	NA
WP_058380449.1\|1720852_1721614_+	GAF domain-containing protein	NA	NA	NA	NA
WP_058380448.1\|1721646_1721856_+	hypothetical protein	NA	NA	NA	NA
WP_058380447.1\|1721963_1723100_-	N-acetylmuramoyl-L-alanine amidase	G3MB93	Bacillus_virus	2.5e-42	48.5
WP_058380446.1\|1723105_1723372_-\|holin	holin	A0A0U4JE55	Bacillus_phage	1.2e-14	46.5
WP_058380445.1\|1723389_1723770_-	hypothetical protein	NA	NA	NA	NA
WP_058380444.1\|1723847_1724105_-	hypothetical protein	NA	NA	NA	NA
WP_058380443.1\|1724376_1725036_-	hypothetical protein	NA	NA	NA	NA
WP_058380442.1\|1725224_1725554_-	hypothetical protein	NA	NA	NA	NA
WP_058380441.1\|1725677_1726532_+	hypothetical protein	NA	NA	NA	NA
WP_058380440.1\|1726768_1728715_-	hypothetical protein	Q4ZA81	Staphylococcus_virus	2.0e-23	23.8
WP_058380439.1\|1728737_1728983_-	hypothetical protein	NA	NA	NA	NA
WP_058383616.1\|1728994_1730917_-\|tail	phage tail protein	A0A1Q1PW30	Staphylococcus_phage	4.5e-39	30.0
WP_058383615.1\|1730916_1732386_-\|tail	phage tail family protein	A0A2H4JH21	uncultured_Caudovirales_phage	1.1e-42	27.9
WP_058383614.1\|1732385_1735439_-	hypothetical protein	A0A2H4J322	uncultured_Caudovirales_phage	1.8e-34	26.4
WP_058383612.1\|1735785_1736238_-	hypothetical protein	O48453	Bacillus_phage	1.6e-11	34.8
WP_058383611.1\|1736309_1736834_-\|tail	phage major tail protein, TP901-1 family	Q0PDK9	Bacillus_phage	1.3e-25	41.5
WP_058383610.1\|1736849_1737254_-	DUF3168 domain-containing protein	W8EK61	Geobacillus_phage	2.6e-18	38.6
WP_058383609.1\|1737250_1737685_-	HK97 gp10 family phage protein	Q4ZCE4	Staphylococcus_virus	2.5e-30	48.9
WP_058383608.1\|1737677_1738013_-\|head	phage head closure protein	NA	NA	NA	NA
WP_058383607.1\|1738005_1738356_-\|head,tail	phage head-tail connector protein	A0A2H4JHC4	uncultured_Caudovirales_phage	3.3e-09	33.3
WP_058383606.1\|1738365_1738752_-	hypothetical protein	NA	NA	NA	NA
WP_058383605.1\|1738809_1739769_-	hypothetical protein	D2J006	Enterococcus_phage	7.5e-96	58.1
WP_058383604.1\|1739785_1740418_-	phage scaffolding protein	Q9T1B8	Listeria_phage	2.7e-17	42.2
WP_058383603.1\|1740605_1741634_-\|head	phage head morphogenesis protein	A0A141VTM3	Staphylococcus_phage	8.2e-40	36.4
WP_058383602.1\|1741630_1742605_-\|portal	phage portal protein	A0A0A8WFC0	Clostridium_phage	2.0e-56	46.0
WP_058383601.1\|1742601_1743195_-\|portal	phage portal protein	A0A1Q1PVT0	Bacillus_phage	3.0e-34	42.5
WP_058383600.1\|1743208_1744609_-	hypothetical protein	C9E2I7	Enterococcus_phage	4.1e-151	60.0
WP_058383599.1\|1744601_1745408_-\|terminase	terminase small subunit	Q5YA77	Bacillus_phage	5.8e-57	50.7
WP_058383598.1\|1745608_1746061_-	hypothetical protein	A0A2H4J4R7	uncultured_Caudovirales_phage	2.5e-41	55.1
WP_058383596.1\|1746349_1746844_-	hypothetical protein	NA	NA	NA	NA
WP_058383595.1\|1746910_1747984_-	hypothetical protein	NA	NA	NA	NA
WP_058383594.1\|1747980_1748178_-	XtrA/YqaO family protein	A0A1L2JY31	Aeribacillus_phage	2.4e-09	53.0
WP_058383593.1\|1748206_1748626_-	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	8.0e-34	56.2
WP_058383592.1\|1748625_1748898_-	hypothetical protein	NA	NA	NA	NA
WP_058383591.1\|1749038_1749287_-	hypothetical protein	NA	NA	NA	NA
WP_058383590.1\|1749283_1749889_-	dUTP diphosphatase	A0A2H4J260	uncultured_Caudovirales_phage	4.2e-28	42.2
WP_058383589.1\|1749902_1750097_-	membrane lipoprotein lipid attachment site-containing protein	NA	NA	NA	NA
WP_058383588.1\|1750338_1750794_-	methyltransferase domain-containing protein	A0A059T693	Listeria_phage	5.5e-65	73.2
WP_068347033.1\|1750882_1751161_+	hypothetical protein	NA	NA	NA	NA
WP_058383587.1\|1751222_1751429_-	hypothetical protein	NA	NA	NA	NA
WP_058383586.1\|1751428_1752256_-	ATP-binding protein	S6B1M2	Thermus_phage	5.0e-80	56.5
WP_083509149.1\|1752209_1753121_-	DnaD domain protein	A6M985	Geobacillus_virus	4.4e-53	50.8
WP_058383585.1\|1753174_1754047_-	recombinase RecT	S6AVW6	Thermus_phage	1.4e-64	53.7
WP_058383584.1\|1754060_1754996_-	YqaJ viral recombinase family protein	S6C475	Thermus_phage	2.9e-108	59.8
WP_058383583.1\|1755094_1755340_-	hypothetical protein	NA	NA	NA	NA
WP_058383582.1\|1755603_1756125_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_083509231.1\|1756195_1756498_-	hypothetical protein	NA	NA	NA	NA
WP_157073477.1\|1756568_1756715_-	hypothetical protein	NA	NA	NA	NA
WP_058383580.1\|1756750_1757473_-	phage antirepressor KilAC domain-containing protein	Q938N5	Temperate_phage	1.9e-67	53.6
WP_058383579.1\|1757577_1757784_+	KTSC domain-containing protein	NA	NA	NA	NA
WP_157073478.1\|1757780_1757936_-	BC1881 family protein	NA	NA	NA	NA
WP_058383578.1\|1758057_1758285_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_083509150.1\|1758435_1758783_+	helix-turn-helix transcriptional regulator	A8ATJ9	Listeria_phage	6.4e-13	58.2
WP_058383577.1\|1758811_1759498_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_058383576.1\|1759588_1760050_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	2.9e-21	34.5
WP_058383575.1\|1760157_1761351_+\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	8.3e-60	37.0
WP_058383574.1\|1761440_1762343_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	2.6e-21	36.9
WP_058383573.1\|1762361_1763522_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_083509151.1\|1763643_1764414_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	4.6e-27	40.1
WP_058383572.1\|1764468_1765344_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_058383571.1\|1765355_1765913_-	signal peptidase I	NA	NA	NA	NA
WP_058383570.1\|1766109_1766454_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_058383819.1\|1766589_1767318_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
1772735:1772751	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3028253 : 3036297

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058382408.1\|3028253_3029000_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.2e-25	31.3
WP_058382407.1\|3029055_3030801_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	9.9e-54	30.9
WP_058382406.1\|3030775_3031399_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	8.4e-48	49.7
WP_058382405.1\|3031695_3032094_-	DUF1259 domain-containing protein	NA	NA	NA	NA
WP_058382404.1\|3032338_3032527_-	hypothetical protein	NA	NA	NA	NA
WP_083509250.1\|3032600_3033008_-	flavodoxin domain-containing protein	A7KUZ7	Bacillus_phage	1.5e-16	40.2
WP_058382403.1\|3033066_3034113_-	ribonucleotide-diphosphate reductase subunit beta	A7KUZ8	Bacillus_phage	2.2e-104	55.7
WP_058382402.1\|3034119_3036297_-	ribonucleoside-diphosphate reductase subunit alpha	A7KUZ9	Bacillus_phage	6.2e-263	60.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013659

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection