CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013688	Streptococcus gallolyticus strain ICDDRB-NRC-S1, complete genome	4 crisprs	cas3,RT,csa3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh	0	19	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013688_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013688_1

338028-338131

Orphan

Consensus_repeat	Method
TATTGATCAAAAAATTGCCAAGCAAAAAGAACGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013688_1

>merge|NZ_CP013688|1|338028-338131|CRISPRCasFinder
TATTGATCAAAAAATTGCCAAGCAAAAAGAACGTTGCATACGACTTCGTGATCGTAAAGATGTTACGGTTATTGATCAAAAAATTGCCAAGCAAAAAGAACGTT

>NZ_CP013688|1|1|338028-338131|CRISPRCasFinder
TATTGATCAAAAAATTGCCAAGCAAAAAGAACGTT	GCATACGACTTCGTGATCGTAAAGATGTTACGGT
TATTGATCAAAAAATTGCCAAGCAAAAAGAACGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013688.1\|WP_058621439.1\|340271_341060_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP013688.1\|WP_014295117.1\|341268_342600_+\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP013688.1\|WP_058621440.1\|349036_349693_+\|DUF1803-domain-containing-protein	unknown	unknown	gnl\|CDD\|370139
NZ_CP013688.1\|WP_014295127.1\|333395_333941_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|349967
NZ_CP013688.1\|WP_044563105.1\|326454_326715_+\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|178815
NZ_CP013688.1\|WP_014295115.1\|343513_344161_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_014295122.1\|336332_337274_+\|TIGR01212-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
NZ_CP013688.1\|WP_014295110.1\|348528_349044_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368573
NZ_CP013688.1\|WP_058621436.1\|328178_329528_-\|Trk-system-potassium-transporter-TrkA	unknown	unknown	gnl\|CDD\|236541
NZ_CP013688.1\|WP_081498585.1\|338176_340237_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP013688.1\|WP_014295124.1\|335035_335449_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|225308
NZ_CP013688.1\|WP_058621438.1\|337270_337834_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377744
NZ_CP013688.1\|WP_039671153.1\|326735_328175_-\|TrkH-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223246
NZ_CP013688.1\|WP_014295114.1\|344309_345242_+\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_CP013688.1\|WP_014295116.1\|342671_343460_+\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_CP013688.1\|WP_158526989.1\|349764_350802_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|376439
NZ_CP013688.1\|WP_039671149.1\|334377_334947_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|226129
NZ_CP013688.1\|WP_014295123.1\|335570_336227_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP013688.1\|WP_058621437.1\|329786_331634_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|372624
NZ_CP013688.1\|WP_014295111.1\|347687_348419_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999

Protein	Function_ID	Function_description	E-value
NZ_CP013688.1\|WP_058621439.1\|340271_341060_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	5.69721e-89
NZ_CP013688.1\|WP_014295117.1\|341268_342600_+\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.66421e-134
NZ_CP013688.1\|WP_058621440.1\|349036_349693_+\|DUF1803-domain-containing-protein	gnl\|CDD\|370139	pfam08820, DUF1803, Domain of unknown function (DUF1803). This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.	7.37344e-40
NZ_CP013688.1\|WP_014295127.1\|333395_333941_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.66676e-85
NZ_CP013688.1\|WP_044563105.1\|326454_326715_+\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|178815	PRK00041, PRK00041, hypothetical protein; Validated.	1.18189e-37
NZ_CP013688.1\|WP_014295122.1\|336332_337274_+\|TIGR01212-family-radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	0
NZ_CP013688.1\|WP_014295110.1\|348528_349044_+\|hypothetical-protein	gnl\|CDD\|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	5.7665e-20
NZ_CP013688.1\|WP_058621436.1\|328178_329528_-\|Trk-system-potassium-transporter-TrkA	gnl\|CDD\|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	3.41696e-175
NZ_CP013688.1\|WP_081498585.1\|338176_340237_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.23035e-72
NZ_CP013688.1\|WP_014295124.1\|335035_335449_+\|EamA-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	1.51594e-37
NZ_CP013688.1\|WP_058621438.1\|337270_337834_+\|SAM-dependent-methyltransferase	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	3.11192e-71
NZ_CP013688.1\|WP_039671153.1\|326735_328175_-\|TrkH-family-potassium-uptake-protein	gnl\|CDD\|223246	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	2.31503e-96
NZ_CP013688.1\|WP_014295114.1\|344309_345242_+\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	0
NZ_CP013688.1\|WP_014295116.1\|342671_343460_+\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	1.30245e-114
NZ_CP013688.1\|WP_158526989.1\|349764_350802_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.70311e-78
NZ_CP013688.1\|WP_039671149.1\|334377_334947_+\|ECF-transporter-S-component	gnl\|CDD\|226129	COG3601, COG3601, Predicted membrane protein [Function unknown].	1.40097e-48
NZ_CP013688.1\|WP_014295123.1\|335570_336227_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	6.27034e-44
NZ_CP013688.1\|WP_058621437.1\|329786_331634_+\|APC-family-permease	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	1.33296e-28
NZ_CP013688.1\|WP_014295111.1\|347687_348419_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	3.54159e-86

>NZ_CP013688.1|WP_058621438.1|337270_337834_+|SAM-dependent-methyltransferase
MIKRPLHLSHDFLAEILDEQAIAVDATMGNGNDTVFLAQHAKEVYAFDVQEQALQSTKECLEKQEIHNAHLILDGHQHIDHYVNQPIRAAIFNLGYLPSADKTVITKPDTTLIAVEKILKKLEVGGRLAIMIYYGHEGGDMEKDAVLEYVNQLDQRLFTAMLYQPLNQINQPPFLVMIEKLKQSKES
>NZ_CP013688.1|WP_014295122.1|336332_337274_+|TIGR01212-family-radical-SAM-protein
MKKRYNTLNDYYRQIFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNTHDTVDVIRERYEQAINESGVVGINIGTRPDCLPDETIAYIAELSDRMHVTVELGLQTTYDETSKIINRAHTYDLYVETVKRLRQLAPKVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLHLLHLMTSTKMQRDYHEGRLKLLGMEEYVNIICDQLEIIPKNIIIHRITGDAPRDMLIGPMWSLKKWEVLNAIDQEMERRGSYQGCKLENKEAVL
>NZ_CP013688.1|WP_014295123.1|335570_336227_+|phosphatase-PAP2-family-protein
MKHKQNYLVGASFFLLIFMMLGYLVKFFPETLVGIDSSIQTSVRGDLPANATAFFKIVTHFGHEVFIFVYVFAIAFVFYFWKKWKAEAILLAGNLVLMGIFSTGFKYLYNRPRPSIQYLIPKPMGPSFPSWHAAATMVVALSLVVIIEQHLTKTTLKRCLQVLVVVIALTTALSRIYLGVHYPSDILGGWLLAFAIAATTYPFYDKKRFEWRFQGKQE
>NZ_CP013688.1|WP_014295124.1|335035_335449_+|EamA-family-transporter
MWVLFAILSAVFAALTSILAKIGISGVNSNLATAIRTVVVVFMAWGIVFITNAQSGIGDINRKSWLFLILSGLATGASWLFYYRALQMGDASKVASIDKLSVVITLILAFIFLNEQLTLKSMLGCLLIVVGSLLMIL
>NZ_CP013688.1|WP_039671149.1|334377_334947_+|ECF-transporter-S-component
MPETMTNTRKIAHIAILSTLSFLLMYLQFPLIPSASFLQFDFSVLPVLVGLVMFDLKSALGILILRTLLKLLLNNGGVSTIIGLPMNVVALGVFVVALAILWKQKPSLKNYLLASVVGTLGLTVAMFVLNYVYAVPLYAKFANFDISAILGLGNYLFAMVIPFNLIEGIIFSVTFFILYSCLKPILEID
>NZ_CP013688.1|WP_014295127.1|333395_333941_+|tRNA-(cytidine(34)-2'-O)-methyltransferase
MNIEEIDYHEEPNKTTNHIVLFQPQIPQNTGNIARTCAATNAPLHIIRPMGFPIDDHKMKRAGLDYWDKLDVTFYDSLDEFMEKCDGEVHLISKFANKVYSDENYNDGKQHYFLFGREDKGLPEEFMRANPEKALRIPMNDEHVRSLNLSNTVCMIVYEALRQQAFPNLELSHTYAHDKLK
>NZ_CP013688.1|WP_058621437.1|329786_331634_+|APC-family-permease
MLEKLRNVFIGNPLKSAGESDEEHLLSKSQALAMLSSDALSSIAYGPEQVILVLTTISAAAIWWSLPIGLLVLVLLVSLTISYQQVIHAYPKGGGAYMVSTENLSPSMGLIAGGSLLVDYMLTVAVSVSSGADAITSAFPAIKEFNLEISIVLVLILMFMNLRGLRESATSLMIPVYLFIVSILFLIGYGSIQIATGHLAYSATAHVGKVVPGVSLILLLKAFTSGSASLTGVEAISNAVPFFKKPKEKNAAGTLAIMSIILGAMFAGITFLNYWLGILPSAHVTVLAQIAQKIFGDSAIGNALFYIFQLSTALILAVAANTGFSAFPMLAFNMAKNKYMPHLFMGKGARLSYSNGIITLAVGAIVLLCIFNGSTERLIPLYTIGVFIPFALSQTGMVIHWKRKFGKGYLKHSVANILGAIICYLIILILLIFRIGEIWPFFPIIVVLMILFYSIKSHYNNVAMQLRLTDDVKNIHYDGNTVLILVGNITQASIRAINYAKSIGQTVVAMHVSTLETREKDLEIEQEFKTYFPDVTFVNIESNYRDIVKPTMSFVQKMNQEAKKNNHTMTVIIPKFIPKHRWQNILHNQMSLRLLARLRWYEDIIIAIYSYHLKK
>NZ_CP013688.1|WP_058621436.1|328178_329528_-|Trk-system-potassium-transporter-TrkA
MKIIVVGGGKVGTALCRSLVEEKHDVVLIEEKESVLKNITKRQDVMGIVGNGANFKILEQADVSNCDIFIALTAEDEVNMISAVLAKKMGAKETVVRVRNPEYSNAYFKDKDFLGFSLVVNPELLTARYIANSVDFPNALSVEHFVNGRVMLMEFMIADGSKLCQMTLSQFRKKFGNIVICAIERQGKLIIPDGDAVLKTGDKIFVTGNRVEMILFHNFVKTKIIKNLMIIGAGRIAYYLLNILKHTRINLKVIENNQERAELFSQEFPDVHVVQGDGTAKNVLLEESVENFDAVATLTGVDEENIITSMFLETLGVQKNITKVNRTSLLEIIDTSQFSSIVTPKSIAVDTMMHFIRGRVNAQDSNLDAMHHIANGRIESLQFEIRESNKMAGKSLSLLKFRDNILIVAIIRKGKTIYPTGEDVLQVGDKIVVVTFLKNITRIYDLLAR
>NZ_CP013688.1|WP_039671153.1|326735_328175_-|TrkH-family-potassium-uptake-protein
MNRSMVRYLLSKLLLIEAALLLVPMLVAIIYSEPLRVLNSIGITIGILLILGLLGSAFKPKNYHIYTKEGLLIVALCWILWSFFGALPFVLSGQIPSIIDAFFEMSSGFTTTGATILPDVSVLTHSLLFWRSFAHLIGGMGVLVFALAIMENSKNSHLEVMRAEVPGPVFGKVVSKLKETAQILYIIYLTMFVVLAIILKIASMPIYDSIVTAMGCAGTGGFAVYNDSIAHYNSSLITNIVSVAVLLFGINFNLYYFLLLRKFKAFFKDEELRTYIGIIVISTALIWLNVSGLYASAGKGLENALFEVTNVITTTGFGITDLTVWPLFSQVILLILMVIGGSAGSTAGGLKVMRALILTKISRNQVLSTLYPNRIMTLHVNYQPLDKETQRGVLKYFSLYITLLVGLILILSLDSNNFMVVVSAAASTFNNIGPMLGTSDTFAIFSPFSKLIMSFAMIAGRLEIYPMLLLFIPKTWSKY
>NZ_CP013688.1|WP_044563105.1|326454_326715_+|membrane-protein-insertion-efficiency-factor-YidD
MKKSLIALVKWYQKRISPMSPPSCRYRPTCSNYMIGAIEKHGLKGILMGIARIIRCHPFVTGGDDPVPDYFTLRRNKDFRTKKEEG
>NZ_CP013688.1|WP_081498585.1|338176_340237_+|sodium:proton-antiporter
MESSILVIAFLLMLIVSNVINRLYPKLPLPFIQIILGILVGVLAKETTLTLNSELFLALVIAPLNFREGQESDVTTFVKYKSIVAYLILPTVLITMLTVGYVTGKLLPVDVPLAASFALGAALAPTDAVAFLSIAKRFKFPKRVESILTIEGLLNDASGLISFQFAVTALTTGAFSLLTASFSLFWVIIGGMLVGLFFALLNRGVMAFLEKIDVADVTGALLLELSLPIVSYFVASLFGVSGIIAVVIAGLSQASRFKRIRLFDAEVDRVSQIIWETVSFILNGFVFIVFGYELTRIVEPALTNPLVNKYRLVAIVLVVTALLFLVRFVMVGLYYILHYRKGKRLSKSLLREVLLLTFSGVKGTVSIATILLLPQFESYAYSLILFTVAAVTLLSFLIGVFVLPNLAQSSDDTDTTDYVTQIAILNEVVKTLEEDLKEVEDKGPLYAAIDNYNGRIEHLILEQEPTIVKKELAYLRLMILGIESDGLEHAFSEGKIELFEYRLYQRYLQNLERQINRDFISTFSYFFTISMRMIRRLVRESLSFWPTIRHFLSGKSREIKLTEDNRERLTELYLRNTELVLEGLQDLEGIYNSELISFLQRSRLQEANIIESGVFVERVIAHMKPDNIYEMLRGYYLERKVIAEYEMRGDITSSYATFLRRNVNKLESYSLKDDYGTLPYNYFIIK
>NZ_CP013688.1|WP_058621439.1|340271_341060_-|ABC-transporter-ATP-binding-protein
MLQIKLKNVSLERQHKLLLKNLNWEVNKGEHWSILGLNGSGKTTLLKLIMAEYWKTDGEVEVLGTSFGGTDISDIRTKIGIVGSFIAERLPANMLAEKIVLTGKYKSSILYKEYGEKELDEARQMLISIGGEYLLGRIYTSLSQGEKQLLLIARSLMENPEILILDEATSGLDLFAREKLLTQIEQITSLPNAPTILYVTHHAEEITQSMTHVLLLKKGEIIAQGPKNEVLTEDILTDFYDRIVSIISLGDERIYIKPEFKS
>NZ_CP013688.1|WP_014295117.1|341268_342600_+|HlyC/CorC-family-transporter
MEDPSQNLVLQFILLLILTLLNAFFSASEMALVSLNRSRVEQKAEEGDKKFIRLLSVLENPNNFLSTIQVGITFISLLQGASLSASLGSVIASWFGDFVWAQTAGSVISLVFLTYVSIVLGELYPKRIAMNLKENLAVISTPVIIFIGKIVSPFVWLLSASTNLLSRITPMQFDDADEKMTRDEIEYMLSNSEETLDAEEIEMLQGVFSLDELMAREVMVPRTDAFMIDINDDTQENIQKILKQNFSRIPVYDGDKDKIIGVLHTKRLLAAGFRDGFDNIVLRKILQEPLFVPETIFVDDLLRQLRNTQNQMAILLDEYGGVAGIVTLEDLLEEIVGEIDDETDKAEQFVRKIGEHTYIVLGTMTLNEFNDYFDVDLESDDVDTIAGYYLTGVGNIPDQDSRETFEVDTKEKHLTLTNDTVKDGRVTKLKVIFSDIEQSIQED
>NZ_CP013688.1|WP_014295116.1|342671_343460_+|pyruvate-formate-lyase-activating-protein
MTEIDYGKVTGMIHSTESFGSVDGPGIRFVIFMQGCKMRCQYCHNPDTWAMETNQSQERTVDDVLAEALRYKHFWGKNGGITVSGGEAMLQIEFVTALFTKAKELGIHCTLDTCGFAFRDTPEYHEIVDKLLAVTDLILLDLKEINSKQHIVVTRQPNTNILAFARYLSDKEVPVWIRHVLVPGLTDFDDDLIELGKFVATLKNVDKFEILPYHTLGEFKWHELGIPYTLEGVKPPTKERVQNAKDLMHTESYTEYMKRIHQ
>NZ_CP013688.1|WP_014295115.1|343513_344161_+|hypothetical-protein
MNSYKVLKFDDEFVYLTQDGKIKKLARDLFDFDIKLGDKVDYIQDGDIVLVLQNQDEAALDLNDDKSVKSGLLQGILNLFLETLSIHNNDLGNLKKIFSQLLVTLFMAWSLLGVIAIEILLLIESLITFIWRLLVKGVKGLHIVDNSRKYMAYRKEQEAIRDQENHEEEERLLRLALEQEKTAKVEAAKDDSSDNETPDVKETNNDFTQNTIEKD
>NZ_CP013688.1|WP_014295114.1|344309_345242_+|manganese-dependent-inorganic-pyrophosphatase
MSKILVFGHQNPDSDAIGSSVAYAYLKRELGVDAEAVALGTPNEETTFALNYFGVEAPRVVESAKAEGADQVILTDHNEFQQSISDIRDVEVIEVIDHHRVANFETANPLYMRLEPVGSASSIVYRLYKENNVVIPKEMAGLLLSGLISDTLLLKSPTTHATDPAVAADLAEIAGVNLEEYGLALLKAGTNLATKSAEELIDIDAKTFELNGNQVRVAQVNTVDINEVLERQAEIEAAITAAILANGYSDFVLMITDILNSNSEILALGSNIDKVEAAFNFKLENNHAFLPGAVSRKKQVVPQLTESFNA
>NZ_CP013688.1|WP_014295111.1|347687_348419_-|peroxide-stress-protein-YaaA
MKILIPNAKELHTNQDAFPSQPLSAKSQAVLKALQEYSVESLANFYKINLSKADQEWTRWQRLADKQAKNYPAWLLYDGLMYRYMKRTQVTEAERYYLDNHLRIATALYGLISPMTLIAPHRLDFQGNLKINNTSLKQFWRQQYDEEVQNDKLIISLLSSEFEQVFSPNIRKRMVKIVFMENRNGKPKGHSTISKKGRGRLVSLMAEKQIETIEQIKHLTFDGFRFSPELSKDQTLTFIRDQE
>NZ_CP013688.1|WP_014295110.1|348528_349044_+|hypothetical-protein
MNIQELRAGDLLFMYGNSDMSQAIQKATGQYSHVAIYFDSMIYHATKDKGVIKQQLREFLKTKQHRIFVYRYPRIKSEQVQAATEHLLGRPYNHSFYPDNGSYYCSQYIADILPIFETIPMQFGDDKHTISEFWQQYYDELGVTVPLNQSGTNPSQLAQSEHLQYLGELHD
>NZ_CP013688.1|WP_058621440.1|349036_349693_+|DUF1803-domain-containing-protein
MINIFNPDKLTRQAFFQDLINFLYQTDDVTLRQIKENFPEVPKIDRLIEEYVQAGYIIRDNKRYTIGFDLLDSLENVSLDSQLFVDDQSAIYEDLMALTFETHLINEANDLVLVEKTSIARSELTLSNYFFKLADNLSMSKAQEPLYDLLGDVNPQYALKYMTTFLLKFGRKDEVAQKRPDIFVETLEKLDYIRKNDQGKYELNMLFDKENLIFISKA
>NZ_CP013688.1|WP_158526989.1|349764_350802_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MLFVVGTKGRKFMTSGKKVACHFNVLIFLLCLIFLLSLSLGYANSSLLEVCKVFLGKSDATMSFIVTQIRLPRILACMLGGGSLAMSGVLLQTLTKNPLADSGILGINAGAGLVIAIMVGLLDVTNSMMIALMPFLAMLGGILTICTVYFVSRQKNQPISPTRLIITGVGISSLLSGIMISIIANLDTSKTDYIVSWLSGKVSGGNWQTLMILAPLLLITWLLTYSQSYALNIMSLNEETAIALGLNLKRECLYTLILSTALAALSVVLVGNITFIGLLAGHITRQLLGSDHRISLPSSLLIGMIIFLIADTIGRVCLVGTGIPTGLVVAVIGAPYFLYLMIKTT

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Crispr_ID: NZ_CP013688_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013688_2

361914-362008

Orphan

Consensus_repeat	Method
ACTACCCCAACAACTCCAAATAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013688_2

>merge|NZ_CP013688|2|361914-362008|CRISPRCasFinder
ACTACCCCAACAACTCCAAATACGCCAGATGTACCAACTACCCCAACAACTCCAAATACGCCAGATGTACCAACTACCCCAACAACTCCAAACAC

>NZ_CP013688|2|2|361914-362008|CRISPRCasFinder
ACTACCCCAACAACTCCAAATAC	GCCAGATGTACCAACTACCCCAACAACTCCAAATACGCCAGATGTACCA
ACTACCCCAACAACTCCAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013688.1\|WP_014295091.1\|368475_369186_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP013688.1\|WP_058621440.1\|349036_349693_+\|DUF1803-domain-containing-protein	unknown	unknown	gnl\|CDD\|370139
NZ_CP013688.1\|WP_058621449.1\|363145_363736_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
NZ_CP013688.1\|WP_058621451.1\|364637_365819_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380570
NZ_CP013688.1\|WP_058621447.1\|358305_359469_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|224090
NZ_CP013688.1\|WP_014295094.1\|365870_366755_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223633
NZ_CP013688.1\|WP_058621443.1\|351862_352795_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238558
NZ_CP013688.1\|WP_014295110.1\|348528_349044_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368573
NZ_CP013688.1\|WP_058621452.1\|367711_368476_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223488
NZ_CP013688.1\|WP_014295093.1\|366758_367712_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP013688.1\|WP_058621446.1\|357209_358304_+\|cystathionine-gamma-synthase	unknown	unknown	gnl\|CDD\|235983
NZ_CP013688.1\|WP_058621450.1\|363837_364281_+\|YlbF-family-regulator	unknown	unknown	gnl\|CDD\|377611
NZ_CP013688.1\|WP_058621445.1\|355323_356958_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_CP013688.1\|WP_058621444.1\|352816_353599_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP013688.1\|WP_014295104.1\|353775_355227_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	unknown	unknown	gnl\|CDD\|237588
NZ_CP013688.1\|WP_039671140.1\|369356_370016_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341361
NZ_CP013688.1\|WP_158526989.1\|349764_350802_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|376439
NZ_CP013688.1\|WP_058621442.1\|350762_351785_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP013688.1\|WP_009854761.1\|364273_364525_+\|YlbG-family-protein	unknown	unknown	gnl\|CDD\|179410
NZ_CP013688.1\|WP_018364215.1\|362394_363024_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653

Protein	Function_ID	Function_description	E-value
NZ_CP013688.1\|WP_014295091.1\|368475_369186_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	2.73391e-131
NZ_CP013688.1\|WP_058621440.1\|349036_349693_+\|DUF1803-domain-containing-protein	gnl\|CDD\|370139	pfam08820, DUF1803, Domain of unknown function (DUF1803). This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.	7.37344e-40
NZ_CP013688.1\|WP_058621449.1\|363145_363736_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.33578e-129
NZ_CP013688.1\|WP_058621451.1\|364637_365819_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380570	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	3.98765e-133
NZ_CP013688.1\|WP_058621447.1\|358305_359469_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	0
NZ_CP013688.1\|WP_014295094.1\|365870_366755_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	1.27358e-82
NZ_CP013688.1\|WP_058621443.1\|351862_352795_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.3171e-59
NZ_CP013688.1\|WP_014295110.1\|348528_349044_+\|hypothetical-protein	gnl\|CDD\|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	5.7665e-20
NZ_CP013688.1\|WP_058621452.1\|367711_368476_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	8.75399e-131
NZ_CP013688.1\|WP_014295093.1\|366758_367712_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	5.97305e-70
NZ_CP013688.1\|WP_058621446.1\|357209_358304_+\|cystathionine-gamma-synthase	gnl\|CDD\|235983	PRK07269, PRK07269, cystathionine gamma-synthase; Reviewed.	0
NZ_CP013688.1\|WP_058621450.1\|363837_364281_+\|YlbF-family-regulator	gnl\|CDD\|377611	pfam06133, Com_YlbF, Control of competence regulator ComK, YlbF/YmcA. YlbF Is a family of short Gram-positive and archaeal proteins that includes both YlbF and YmcA which may interact synergistically. The family is necessary for correct biofilm formation, as null mutants of ymcA and ylbF fail to form pellicles at air-liquid interfaces and grow on solid media as smooth, undifferentiated colonies. During development, YmcA, YlbF and YaaT, family PSPI, pfam04468, interact directly with one another forming a stable ternary complex, in vitro. All three proteins are required for competence, sporulation and the formation of biofilms. The YmcA-YlbF-YaaT complex affects the phosphotransfer between Spo0F and Spo0B, thus accelerating the production of Spo0A~P. The three processes of biofilm formation, mature spore formation and competence all require the active, phosphorylated form of Spo0A, as Spo0A-P.	5.19499e-11
NZ_CP013688.1\|WP_058621445.1\|355323_356958_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	3.28164e-115
NZ_CP013688.1\|WP_058621444.1\|352816_353599_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.00703e-119
NZ_CP013688.1\|WP_014295104.1\|353775_355227_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	gnl\|CDD\|237588	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase.	0
NZ_CP013688.1\|WP_039671140.1\|369356_370016_+\|CBS-domain-containing-protein	gnl\|CDD\|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	6.32119e-59
NZ_CP013688.1\|WP_158526989.1\|349764_350802_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.70311e-78
NZ_CP013688.1\|WP_058621442.1\|350762_351785_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.11225e-80
NZ_CP013688.1\|WP_009854761.1\|364273_364525_+\|YlbG-family-protein	gnl\|CDD\|179410	PRK02302, PRK02302, hypothetical protein; Provisional.	1.61798e-42
NZ_CP013688.1\|WP_018364215.1\|362394_363024_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	4.95367e-145

>NZ_CP013688.1|WP_058621447.1|358305_359469_+|pyridoxal-phosphate-dependent-aminotransferase
MGKYDFTTRPNRLKQFTYKWQSSENNPDLLQLWVADMDFLPVPEIKQAIIDYGQEHIFGYNYFKDSLYQAVIDWEKEEHGYGIKKEEISFIDGVVPAISVAIQAFTEKGDAVLINSPVYYPFARTIRLNDRKLVENSLQIKNGHFEIDFDQLEKDIVDNQVKLYVFCSPHNPGGRVWSSDELQKLGDLCRKHGVILISDEIHQDLALFGHKHHSFNTVDDSFKDFSLILSSATKTFNIAGTKNSFAIIENDQLRKTFQRQQLANNQHEVPAIGLITTEAAFTYGKPWLEELKTVLEKNIDYVVDELSQKTKIKVMKPEGTYLIWLDFSAYGIEQPELDERLQKEAKVVLNNGASFGKEGQTYARFNVAAPFVTVKEAIQRIVRVFSK
>NZ_CP013688.1|WP_058621446.1|357209_358304_+|cystathionine-gamma-synthase
MKSDCRLATILAHAGIKSDEATGALAAPIHFSTTYQHPEFGKSTGFDYTRTQNPTRATLEKTLAAIEKADYALATSSGMSAIVLAFEIFPVGAKVVAARDLYGGSFRWFNDKEREGRFSFEYTNTEAELLAAISDDTDIVYIETPTNPLMVEFDIEKVANAAHAKGVKLIVDNTFYSPIYQNPIPLGADIVVHSATKYLAGHNDVLAGVVITNDKETYDKLFYNLNTTGPTLSPFDSYMLMRGLKTLKLRMEKSTENAREIVAFLEKLPAVKEVLYTGKGGMISFRVVDESKIPDIINSLDIITFAESLGGVESLITYPRTQTHADIPEDVRLSYGLTNDLLRLSIGIEDVEDLIDDLKNALEG
>NZ_CP013688.1|WP_058621445.1|355323_356958_+|polysaccharide-biosynthesis-protein
MSENKTNMTQQQQMVRGAAWLTASNFISRLLGAFYIIPWYAWMGTHGEQANALFGMGYNIYAVFLLISTAGIPVAIAKQVSKYNTLGQEDTSYYLLRKILRLTLVLGLIFAAIMYIGSPILAAWSGGGADLVRVMKSLSWALVLFPSMSVLRGFFQGFNNLKPYAMSQIAEQIIRVIWMLLTAFMIMKIGSGDYVSAVVQSTFAAFIGMIASVLVLLFFLWREGKLQAIFSAGNNDVDIDANAIIIETIKEAIPFIITGAAIQLFQIVDQLSFINTMKLFTSHTTKELQILYAYLSSNPNKVTMILISLATAIGGAGIPLLTENFVNKDKKAAAHLVINSLQMLCMVLFPAMLGAIILAQPVYTLFYGAPNSTALWLFIGALVQVIFLALYSLLAPMLQALFENRKAIRYFGYGLIIKIVLQIPFIYFFHAYGPLLSTAIGLTIPIILMYKRIHEVTRFNHKALWQGILLVSILTVIMGVIVAIATVGLHFIVSPTTRVGSVVYIVLVGALGVLAYGFLALLTRLLDKLIGGRAKALRQKLHLE
>NZ_CP013688.1|WP_014295104.1|353775_355227_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase
MITLEKTLDILKNDHNFREIIFHNHYSLDWKENPSFSKISFDSREADKSTLFFAKGTAFKKEYLEQAIKNGLTFYVSQVDYELDIPAIIVTDIKKAMSLIAMEFYGHPENDLKIIAFTGTKGKTTAAYFAYNILKQSHRTAMFSTMNTTLDGKTFFKSKLTTPESLDLFKMMATAVQNGMTHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFYHKRLLMANSKAVVVNAGMDYFDVVAQQVANTPHDFYGKGSDNTIENGRAFDFDVTGKLAGHYDIQLIGSFNKENAVAAGLACLRLGTSLADIQKGIAQTSVPGRMEVITQTNGAKVFVDYAHNGDSLEKLLSVVEEHQKGDLYLILGATGNKGESRRADFARVINAHPNIHVILTADDPNYEDPQAIAEEIASQVTRPLDIQVDREKAISQAMARTNNETDAVIIAGKGADAYQIVNGERTAYAGDLNIAKNYLN
>NZ_CP013688.1|WP_058621444.1|352816_353599_-|ABC-transporter-ATP-binding-protein
MSDIYAENISVVYDDKVIINDLSVTIAKQKITTIIGANGCGKSTLLKALTRIHALKAGQVFVDGEAIAHLPTKEIAKKLAILPQMLKAIEGISVYELVSYGRFPHQNYLGSLSDTDKEKINWAMEITKIVEFANEKVDSLSGGQRQRVWIAMALAQDTDTIFLDEPTTYLDMNHQLEILELLQKLNQDTQKTIIMVLHDLNLSARFSDELITMKAGAIKYHGKVQDIMTADILRDIFNIEAHIVQDPILNRPILLTYQLT
>NZ_CP013688.1|WP_058621443.1|351862_352795_-|ABC-transporter-substrate-binding-protein
MKKFFAVLTTFLATFLLVACHNTSSTSDDTELSSMPKITGFSYEGDIPKNPQKVINFAYSYTGYLLELGVNVSSYSLDLEKNSPVFGDQLADAVQLTSDDTEAIAAQKPDLIIAFSTDENLDDLKAIAPVLVIEYGKSDYLEMMTNLGKVFDKEDEAQEWLDNWETKTAEAKEELSQYIDSSTTFTVMDFYDKDIYLYGNNWGRGGELIYDSLDYAAPQKVQDDVFPASWFSISQEVLGDYIGDYVVLNVSDDTKEVAASLKESDVWNNISAVKNNHVLEVDESLFYFSDPMSLDKQLDAFVSAIKQANS
>NZ_CP013688.1|WP_058621442.1|350762_351785_-|iron-ABC-transporter-permease
MKQLYLLFQKNKRLRAWLLFFSLCFLFILGWYLSLRFGAVAYSNTQLMSVFRHPLTDSNLQDVIFDLRLPRTIAAILVGAAMAQAGSIIQGVTRNPIADPGLLGINAGAGLALIVGYAIFGSMHYSLILIICLFGAILAAILVFGIAYHPRKGYQQLRLILAGAMISTLFSSLGQAITLYFDLSKAVIGWQSGGLAQINWNMLGMIAPFIVIGLLLAQLFTRQLTILSLDETVAKALGQRTFAMTITFLAIVVILSAAAVALVGSIAFVGLIIPHFVKMFVAKDYRIILPLTAFAGSTFMLWVDLICRTINPPAETPVSAIVSIVGLPCFLWLVRKGENL
>NZ_CP013688.1|WP_158526989.1|349764_350802_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MLFVVGTKGRKFMTSGKKVACHFNVLIFLLCLIFLLSLSLGYANSSLLEVCKVFLGKSDATMSFIVTQIRLPRILACMLGGGSLAMSGVLLQTLTKNPLADSGILGINAGAGLVIAIMVGLLDVTNSMMIALMPFLAMLGGILTICTVYFVSRQKNQPISPTRLIITGVGISSLLSGIMISIIANLDTSKTDYIVSWLSGKVSGGNWQTLMILAPLLLITWLLTYSQSYALNIMSLNEETAIALGLNLKRECLYTLILSTALAALSVVLVGNITFIGLLAGHITRQLLGSDHRISLPSSLLIGMIIFLIADTIGRVCLVGTGIPTGLVVAVIGAPYFLYLMIKTT
>NZ_CP013688.1|WP_058621440.1|349036_349693_+|DUF1803-domain-containing-protein
MINIFNPDKLTRQAFFQDLINFLYQTDDVTLRQIKENFPEVPKIDRLIEEYVQAGYIIRDNKRYTIGFDLLDSLENVSLDSQLFVDDQSAIYEDLMALTFETHLINEANDLVLVEKTSIARSELTLSNYFFKLADNLSMSKAQEPLYDLLGDVNPQYALKYMTTFLLKFGRKDEVAQKRPDIFVETLEKLDYIRKNDQGKYELNMLFDKENLIFISKA
>NZ_CP013688.1|WP_014295110.1|348528_349044_+|hypothetical-protein
MNIQELRAGDLLFMYGNSDMSQAIQKATGQYSHVAIYFDSMIYHATKDKGVIKQQLREFLKTKQHRIFVYRYPRIKSEQVQAATEHLLGRPYNHSFYPDNGSYYCSQYIADILPIFETIPMQFGDDKHTISEFWQQYYDELGVTVPLNQSGTNPSQLAQSEHLQYLGELHD
>NZ_CP013688.1|WP_018364215.1|362394_363024_+|uracil-phosphoribosyltransferase
MGKFQVISHPLIQHKLSILRRTTTSTKDFRELVNEIAMLMGYEVSRDLPLEDVEIETPITKTVQKQLAGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLQPVEYLVKLPEDIDRRQIFVVDPMLATGGSAILAVDSLKKRGAANIKFVCLVAAPEGVKALQDAHPDIDIYTAALDEKLNEHGYIVPGLGDAGDRLFGTK
>NZ_CP013688.1|WP_058621449.1|363145_363736_+|ATP-dependent-Clp-protease-proteolytic-subunit
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQSLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN
>NZ_CP013688.1|WP_058621450.1|363837_364281_+|YlbF-family-regulator
MLAIDEHLFEIDEAIDEVVASFLELESVKDYRKAREVFLADTILQEKIMHFQALKQSYEDAKLYAAFRPEVAEMRHQLFKKKRAIDINEKVSQLRQSEVAVQKILAELSQKISSSISSDIFVDTGLPLVPHKLHHGNCSKGGRKKHV
>NZ_CP013688.1|WP_009854761.1|364273_364525_+|YlbG-family-protein
MFKKQERQGIIVYLYYNRDARKLNKYGDVLYHSRKMRYQVLYVNKEEAEDIAKEISELKFVKEVSLSQFDNIDKNFVGNLARF
>NZ_CP013688.1|WP_058621451.1|364637_365819_+|ABC-transporter-substrate-binding-protein
MHKKIALTALTFLASIALVACSKSPDVTANATGTTIGDTLKIGVNLELTGAVAAYGNAENDGIKLAVEEINKAGGVDGKKIKLVTKDNKSENAEASTAATNLAIQSQVNAMIGPATSGAVSAASLNAQKTGVPLLTPSGTQDDLTVDSDGVKKYVFRATFQDSFQGQVLAQYAYSNLNAKKVVLYYDNSSDYAKGIAEEFQEKYQGEIVATETFASGDKDFQSALTKFKNLDYDAIIMPGYYTETGIITKQARDMGIEVPILGPDGFNDDSFADLAGTANTHDVYYVSGYSTKTALSDKATEFIAAYKEKYGSEPNMFAALAYDSVYMIAKAAEGAETSVDIANNLANLTDFEGVTGTMTIDEDHNPIKTALMVKMKDGVEDSAEAVEITGDN
>NZ_CP013688.1|WP_014295094.1|365870_366755_+|branched-chain-amino-acid-ABC-transporter-permease
MFLEQLPQQLVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLHMNFWIALIFTMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMIFLVGANTRSFPQAIDIVSYKIGSVTVTNIQLLILIVSLVLMVALQLIVKKTKMGKAMRAVSVDSDAAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLMGMTPGIKAFVAAVLGGIGIIPGAALGGFVIGILETLSISLNLSSYRDAIVYGVLIIILLVRPAGILGKNVKEKV
>NZ_CP013688.1|WP_014295093.1|366758_367712_+|branched-chain-amino-acid-ABC-transporter-permease
MKKNLKINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLGQAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYLAIATLGMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWPVIFIFVVAITILILNFLRSSIGRQVISVREDEIAAEAMGVNVTRMKVLIFVMGAIISAIAGSLYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNVSNLRMIIYSLALILVMIFRPGGLLGTKEFTLSRFFNKTKGDNH
>NZ_CP013688.1|WP_058621452.1|367711_368476_+|ABC-transporter-ATP-binding-protein
MALLDVKNLTKHFGGLTAVGDVTMHLNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGSVSLDGTLLNSKKPYKIASLGLSRTFQNIRLFKDMTVLENVLVGMANQNKSHVFASFLRLPKFYQSEEELRQKAMDLLAIFNLDGDADTLAKNLPYGQQRRLEIVRALATEPKILFLDEPAAGMNPQETAELTQLIRQIKEEFNITIMLIEHDMSLVMEVTERIYVLEYGRLIAHGTPDEIKNNQRVIEAYLGGEG
>NZ_CP013688.1|WP_014295091.1|368475_369186_+|ABC-transporter-ATP-binding-protein
MTMLKVDNLSVHYGVIQAVKDVSFEVNEGEVVTLIGANGAGKTSILRTISGLVRPSAGKIEFLGEEIQKEPARKIVASGLSQVPEGRHVFPGLTVLENLELGAFLRNDREENQKNLKKVFDRFPRLEERKSQDAATLSGGEQQMLAMGRALMSQPKLLLLDEPSMGLAPIFIQEIFDIIQDIQKQGTTVLLIEQNANKALAIADRGYVLETGKIVLSGTGKELLESEEVRKAYLGG
>NZ_CP013688.1|WP_039671140.1|369356_370016_+|CBS-domain-containing-protein
MAVKDFMTKKVVYVSPDTTVAHAADMMREQGLRRLPVIENDKLVGIVTERTMAEASPSKATTLSIYEMNYLLNKTKIRDVMIRDVVTVSPYASLEDAIYTMMKNRVGIVPVVESSQVYGIITDKDVFKAFLEISGYGEEGIRVAISADDTVGTLAKIVDTISNDNLNIKRTVVATRKSGKVAIEIQIDGKADVADLREKLLNQGIQVDAIELTEAKSLD

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Crispr_ID: NZ_CP013688_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013688_3

588267-589886

TypeII

Consensus_repeat	Method
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CRISPRCasFinder
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CRT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	PILER-CR

24 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP013688_3

>merge|NZ_CP013688|3|588267-589886|CRISPRCasFinder,CRT,PILER-CR
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTGGAAATTAAAGACCAATTTATCAGTGATTGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACACAAGCAAGTTTTAGCTGATCTACGCAAACGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCACATTGACATTTTTCGGCAAACGAGCACAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTTAGAACAGGTGTTTAGCGAATGGTTGCAAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACGAAAAAGGGACGAGATAAAGAACAATTACTGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCTGAATTGCCAAAACCAAAATCTAAAGAAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCCCGCTCGGTTTTAAAAGTGACAGCGCATGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTTTCTCCTGCACGTTTATATTTTATTTTCTGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACGCCACCCTTGTTTTTCCAGTACCTTGTTTCGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACCTTTTATCTCATTATGATTTATTTTTATCTGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACATTTAAGCGTTAAAATGCTTGCAGAACCTGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACCTACTTACACTTACAAATGGTCTCGACGTGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCTCACAAAGTAGTGGACTATGATGAAGAAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACGACAACGAACGAGAGAGTTTATTAGAAGTGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACCCGAAATCCAAATTGTTGATAGTCCAGATAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACCCAGCAGTCTAGAACTCCTTTGGATTTTATGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACAAAATCAATCTTCTTTTTTTATGCGGTCGGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACCTAAACCATCTCTGGATAATTGCTTTTCAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACAATCAAACAAAGCTGATCATCACCAGAACGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACATTTGAGTAATGAAGTTATAGGTTTAACACGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCATAACAGATAAGTCATTAGTATCATCCGGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACAAAAGTTCAATAAGTTTATCGAATGGTGGAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTTTTGGGTCGTTCGGGAATTTACTTGGAAAGTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAACTCTTCAGATAAAATAGGTGTGTGTTCCCCAGTTTTTGTACTCTCAAGATTTAAGTAACCGTATAAC

>NZ_CP013688|3|3|588267-589886|CRISPRCasFinder
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TGGAAATTAAAGACCAATTTATCAGTGATT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ACAAGCAAGTTTTAGCTGATCTACGCAAAC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCACATTGACATTTTTCGGCAAACGAGCACA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTAGAACAGGTGTTTAGCGAATGGTTGCAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GAAAAAGGGACGAGATAAAGAACAATTACT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTGAATTGCCAAAACCAAAATCTAAAGAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCCCGCTCGGTTTTAAAAGTGACAGCGCAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTCTCCTGCACGTTTATATTTTATTTTCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GCCACCCTTGTTTTTCCAGTACCTTGTTTC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTTTTATCTCATTATGATTTATTTTTATCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTAAGCGTTAAAATGCTTGCAGAACCTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTACTTACACTTACAAATGGTCTCGACGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTCACAAAGTAGTGGACTATGATGAAGAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GACAACGAACGAGAGAGTTTATTAGAAGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCGAAATCCAAATTGTTGATAGTCCAGATA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCAGCAGTCTAGAACTCCTTTGGATTTTAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAATCAATCTTCTTTTTTTATGCGGTCGG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTAAACCATCTCTGGATAATTGCTTTTCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AATCAAACAAAGCTGATCATCACCAGAACG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTGAGTAATGAAGTTATAGGTTTAACAC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCATAACAGATAAGTCATTAGTATCATCCG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAAGTTCAATAAGTTTATCGAATGGTGGA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTTGGGTCGTTCGGGAATTTACTTGGAAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTTCAGATAAAATAGGTGTGTGTTCCCCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTATAAC

>NZ_CP013688|3|1|588267-589886|CRT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TGGAAATTAAAGACCAATTTATCAGTGATT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ACAAGCAAGTTTTAGCTGATCTACGCAAAC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCACATTGACATTTTTCGGCAAACGAGCACA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTAGAACAGGTGTTTAGCGAATGGTTGCAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GAAAAAGGGACGAGATAAAGAACAATTACT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTGAATTGCCAAAACCAAAATCTAAAGAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCCCGCTCGGTTTTAAAAGTGACAGCGCAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTCTCCTGCACGTTTATATTTTATTTTCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GCCACCCTTGTTTTTCCAGTACCTTGTTTC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTTTTATCTCATTATGATTTATTTTTATCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTAAGCGTTAAAATGCTTGCAGAACCTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTACTTACACTTACAAATGGTCTCGACGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTCACAAAGTAGTGGACTATGATGAAGAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GACAACGAACGAGAGAGTTTATTAGAAGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCGAAATCCAAATTGTTGATAGTCCAGATA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCAGCAGTCTAGAACTCCTTTGGATTTTAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAATCAATCTTCTTTTTTTATGCGGTCGG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTAAACCATCTCTGGATAATTGCTTTTCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AATCAAACAAAGCTGATCATCACCAGAACG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTGAGTAATGAAGTTATAGGTTTAACAC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCATAACAGATAAGTCATTAGTATCATCCG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAAGTTCAATAAGTTTATCGAATGGTGGA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTTGGGTCGTTCGGGAATTTACTTGGAAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTTCAGATAAAATAGGTGTGTGTTCCCCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTATAAC

>NZ_CP013688|3|1|588664-589886|PILER-CR
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCCCGCTCGGTTTTAAAAGTGACAGCGCAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTCTCCTGCACGTTTATATTTTATTTTCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GCCACCCTTGTTTTTCCAGTACCTTGTTTC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTTTTATCTCATTATGATTTATTTTTATCT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTAAGCGTTAAAATGCTTGCAGAACCTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTACTTACACTTACAAATGGTCTCGACGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTCACAAAGTAGTGGACTATGATGAAGAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	GACAACGAACGAGAGAGTTTATTAGAAGTG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCGAAATCCAAATTGTTGATAGTCCAGATA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CCAGCAGTCTAGAACTCCTTTGGATTTTAT
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAATCAATCTTCTTTTTTTATGCGGTCGG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	CTAAACCATCTCTGGATAATTGCTTTTCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AATCAAACAAAGCTGATCATCACCAGAACG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	ATTTGAGTAATGAAGTTATAGGTTTAACAC
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCATAACAGATAAGTCATTAGTATCATCCG
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	AAAAGTTCAATAAGTTTATCGAATGGTGGA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TTTTGGGTCGTTCGGGAATTTACTTGGAAA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC	TCTTCAGATAAAATAGGTGTGTGTTCCCCA
GTTTTTGTACTCTCAAGATTTAAGTAACCGTATAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013688.1\|WP_014294906.1\|586832_587156_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP013688.1\|WP_058621517.1\|582357_585747_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_CP013688.1\|WP_082306723.1\|599809_600289_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225995
NZ_CP013688.1\|WP_014294910.1\|580650_581331_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_CP013688.1\|WP_058621522.1\|593375_593852_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP013688.1\|WP_058621518.1\|585919_586831_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP013688.1\|WP_158526993.1\|598283_598829_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP013688.1\|WP_058621526.1\|597860_598283_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_014294909.1\|581332_581503_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_058621519.1\|587152_588202_+\|CRISPR-associated-protein-Cas7	csn2	cd12217_csn2_CAS-II-A	gnl\|CDD\|213410
NZ_CP013688.1\|WP_058621525.1\|596290_597652_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP013688.1\|WP_013852052.1\|579887_580661_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP013688.1\|WP_014294908.1\|581835_582252_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP013688.1\|WP_058621523.1\|593848_594673_+\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|237013
NZ_CP013688.1\|WP_058621520.1\|590046_591882_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP013688.1\|WP_082306724.1\|600209_600446_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013688.1\|WP_058621521.1\|592099_593383_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NZ_CP013688.1\|WP_058621516.1\|577340_578471_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP013688.1\|WP_058621524.1\|594747_596181_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP013688.1\|WP_014294911.1\|578475_579204_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738

Protein	Function_ID	Function_description	E-value
NZ_CP013688.1\|WP_014294906.1\|586832_587156_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.09621e-29
NZ_CP013688.1\|WP_058621517.1\|582357_585747_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_CP013688.1\|WP_082306723.1\|599809_600289_-\|hypothetical-protein	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.15592e-19
NZ_CP013688.1\|WP_014294910.1\|580650_581331_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.56206e-66
NZ_CP013688.1\|WP_058621522.1\|593375_593852_+\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	8.38671e-59
NZ_CP013688.1\|WP_058621518.1\|585919_586831_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	4.93711e-123
NZ_CP013688.1\|WP_158526993.1\|598283_598829_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.92883e-86
NZ_CP013688.1\|WP_058621524.1\|594747_596181_+\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.3409e-54
NZ_CP013688.1\|WP_058621519.1\|587152_588202_+\|CRISPR-associated-protein-Cas7	gnl\|CDD\|213410	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. This family of Csn2 proteins includes Stu0660, the proteins are larger than other (canonical) Csn2 proteins as they have an additional alpha-helical C-terminal domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	5.96881e-150
NZ_CP013688.1\|WP_058621525.1\|596290_597652_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	0
NZ_CP013688.1\|WP_013852052.1\|579887_580661_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	9.01354e-130
NZ_CP013688.1\|WP_014294908.1\|581835_582252_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.45801e-79
NZ_CP013688.1\|WP_058621523.1\|593848_594673_+\|prephenate-dehydratase	gnl\|CDD\|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	1.19796e-149
NZ_CP013688.1\|WP_058621520.1\|590046_591882_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP013688.1\|WP_082306724.1\|600209_600446_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.20313e-09
NZ_CP013688.1\|WP_058621521.1\|592099_593383_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP013688.1\|WP_058621516.1\|577340_578471_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP013688.1\|WP_014294911.1\|578475_579204_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	8.12759e-98

>NZ_CP013688.1|WP_058621519.1|587152_588202_+|CRISPR-associated-protein-Cas7
MRLHFTHPYKDNLDINFGQFTQIIGQNQQLKYYLWQIFMWYFDGKKYSEEDLSLFNQEEPEILCEGKSLKRNSFSVISISDIQDLLEQMSYKRGTVACDFLKLHLNTVDVMTEVDEINDKLDKISLTVNHNLDLSIKDVTYHTESCVVTSEQLLSKYFQPYFNYQGRNISFEFVDNETKVMFLLKMLQERLSNDTNNILLIFKNMDDYLDYSSFITICKTIRQMTEKFPNFYCTIFPSNESYLYVTKETVEHVTIVSDFIESLFDLDFMYERFIGRYPSNNIPSKSEFLILLQKNASYLFSDQISYISLGISDMVAIKILNSLYQYDKSVVYPIPKIDPLEISFLKDKD
>NZ_CP013688.1|WP_014294906.1|586832_587156_+|CRISPR-associated-endonuclease-Cas2
MRYAAMRLLCFFDLPMETAQEKRVYRNFRKELIANGFEMLQFSVYYRTCPNRSFANKFYKRLQQSNLPAGNVRLLAVTEKQFSEMTLIVGGKTKQEEVVSDNKLVVI
>NZ_CP013688.1|WP_058621518.1|585919_586831_+|type-II-CRISPR-associated-endonuclease-Cas1
MTWRVVHVNQSEKMRLKLDNIVIKKLGEEYTIPLSDISIIVAEGGDTVVTLRLLSALSKYNIAFIVCDNQHLPTGIYHAPNGHSRAYKRLQKQLEWSQEQKDKLWQIVTYFKINNQQDVLSIFERDIDAIQLLANYKDNIELGDKTNREGHAAKVYFNELFGKQFTRVTQQEADVINAGLNYGYAIFRAQMARIIEGYGLNPLVGIFHRNEYNQFNLVDDLMEPFRQIVDVWVYQNLRDKEYLKYEYRLNLTNLLNAKIKYGNENCTVTGAMDKYVQGFIKCIDKKDTSKFFCPVVSSLELES
>NZ_CP013688.1|WP_058621517.1|582357_585747_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTNGKILGLDIGIASVGVGIIEAKTGKVVHANSRLFSAANAENNAERRGFRGSRRLNRRKKHRVKRVRDLFEKYGIVTDFRNLNLNPYELRVKGLTEQLTNEELFAALRTISKRRGISYLDDAEDDSTGSTDYAKSIDENRRLLKTKTPGQIQLERLEKYGQLRGNFTVYDENGEAHRLINVFSTSDYEKEARKILETQADYNKKITAEFIDDYVEILTQKRKYYHGPGNEKSRTDYGRFRTDGTTLENIFGILIGKCSFYPDEYRASKASYTAQEYNFLNDLNNLKVPTETGKLSTEQKEALVEFAKSTATLGPAKLLKEIAKILDCKVDEIKGYREDDKGKPDLHTFEPYRKLKFNLDSVNIDDLSREVLDKLADILTLNTEREGIEDAIKRNLPNQFTEEQISEIINVRKSQSTAFNKGWHSFSAKLMNELIPELYATSDEQMTILTRLEKFKVKKKSSKNIKTIDEKEITDEIYNPVVAKSVRQTIKIINAAVKKYGDFDKIVIEMPRDKNADDEKKFIDKRNKENKKEKDDALKRAAYLYNGTDKLPDEVFHENKQLETKIRLWYQQGERCLYSGKPIPIQELVHNSNNFEIDHILPLSLSFDDSLANKVLVYSWTNQEKGQRTPYQVIDSMDAAWSFREMKDYVLKQKGLGKKKRDYLLTTENIDKIEVKKKFIERNLVDTRYASRVVLNSLQSALRELGKDTKVSVVRGQFTSQLRRKWKIDKSRETYHHHAVDALIIAASSQLKLWEKQDNPMFVDYGNNQVVDKQTGEILSVSDDEYKELVFQPPYQGFVNTISSKGFEDEILFSYQVDSKYNRKVSDATIYSTRKAKIGKDKKEETYVLGKIKDIYSQNGFDTFVKKYNKDKTQFLMYQKDPLTWENVIEVILRDYPTTKKSEDGKNDVKCNPFEEYRRENGLICKYSKKGKGTPIKSLKYYDKKLGNCIDITPQESKNRVVLRQISPWRADIYFNPETLKYELMGLKYSDLSFEKGTGKYHISQEKYDAIKEKEGVGKDSEFKFTLYRNDLILIKDTLNNCERMLRFGSKNDTSKHYVELKPLEKGTFDSEEEILPVLGKVAKSGQFIKGLNKPNISIYKVRTDVLGNKYFVKKEGDKPKLDFKNNKK
>NZ_CP013688.1|WP_014294908.1|581835_582252_+|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLVGEVLHRIERRGFTIEKLEMRMATPELLEKHYADLVDRPFFPLIVDFMTSGPVITGVMSGNEVVTSWRTMMGATNPKEALPGTIRGDYAQAPDEGGAIFNIVHGSDSPESVEREIALWFGE
>NZ_CP013688.1|WP_014294909.1|581332_581503_+|hypothetical-protein
MSLAWYYWLLFAVSWLFAILLWIKSTTIPQKWLKSLFVICGLIAFALPFFWGWLVN
>NZ_CP013688.1|WP_014294910.1|580650_581331_+|TIGR01906-family-membrane-protein
MKNKLWTFSTWLWLLALAVLVAIYGAWLIYPLEVDWLKLTLQVTITKDDLLKNFNILMTYLTNPLSHTLSMPDFPSSTDGLKHFRDVKHLFHLAQAVFVVLLYPSWRFWKNSRAEKSLFLHQRAFTLAAVLPVLIAVAGLLIGFDQFFTLFHEVLFPGDSTWLFNPATDPIIWVLPEEFFLHCFIIFFVTYEVIMIGLVVIARRQLAKRLQDQQKHPKTIKVERND
>NZ_CP013688.1|WP_013852052.1|579887_580661_+|TIGR01457-family-HAD-type-hydrolase
MTYKGYLIDLDGTIYKGKNRIPAGERFIQRLQERNIPYVLVTNNTTRTPEKVQEMLATQFNVHTPLETIYTATMATIDYMNDMNRGKTVYVIGETGLKTAIAEAGYVEDTENPAYVVVGLDTQLTYEMLAIATLAIQKGAVFIGTNPDLNIPTERGLMPGAGSINKLLETATRVQPVFIGKPNAIIMNKALDVLGVKREEAIMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVPTLPVKPDHVLASLDEWNFDEK
>NZ_CP013688.1|WP_014294911.1|578475_579204_+|acyl-ACP-thioesterase
MGLSYQENYQVPFYESDINHNMKLPQLLSLVLQVSGKQSLSLGMSDDYIYQTYNLVWIITEYAIEIERLPKYTENIVIETVPTAYNKLFCYRDFNVYGESGDKIMTIHSTFVLMDYDSRKVHTVIDEIVDVYEVEKIKKIYRGPRYESLENPEETTYHVRFFDLDLNGHVNNSKYLEWMYDVLDVEFLKEHIPHHINLKYVKEVHYGHDIKSRVETDGLITKHEIVTQGAVHAQARIEWKEK
>NZ_CP013688.1|WP_058621516.1|577340_578471_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLTKSTSAYVHIPFCTQICYYCDFSKVFIKNQPVDDYLQALIHEFESYDIEQLRTLYIGGGTPTSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSLGVQTFNDKQLKRIGRSHNESQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKAIALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEVEMFEYIIAELEANGFEHYEISNFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPIQHYLKAVSEGNARLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFEEHYGQIVTELCQQGLLVSDDKVVRMTKKGLFLGDTVAERFILE
>NZ_CP013688.1|WP_058621520.1|590046_591882_+|elongation-factor-4
MDIQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEYVPAPAGDVEAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQLMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTHVGDTVTLAENPAEAPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTKVASIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDENRVNIIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSKLVKMDILLNGDKVDALSFIVHNEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDNSKK
>NZ_CP013688.1|WP_058621521.1|592099_593383_+|3-phosphoshikimate-1-carboxyvinyltransferase
MKLLTNVSQLKGTLRVPGDKSISHRSIMFGSLAKGTTTVHDILRGEDVLSTMQVFRDLGVDIQDDGNIVTITGVGFDGLKAPKNKLDMGNSGTSIRLISGVLAGQDFTVEMFGDDSLSKRPMDRVTIPLRQMGVEVSGQTDRDLPPLTMRGSKALKPIHYQLPVASAQVKSALIFAALQADGESVIIEKEKTRNHTEDMIVQFGGAIDVNDKEIRIKGGQEFTGQDVVVPGDISSAAFWLVAGLIVPNAKVTLENVGINETRTGIIDVIKEMGGKMTISNVDEIAKSATITVETSELHGVEIGGEIIPRLIDELPIIALLATQANGTTIIRDAEELKVKETDRIQVVADALNAMGADITPTDDGMIIKGKTPLHGAKVNTFSDHRIGMMTAIAALLVSDGDVELERSEAINTSYPSFFNDLEVLSRG
>NZ_CP013688.1|WP_058621522.1|593375_593852_+|shikimate-kinase
MARIIIGFMGSGKSTISSLLDKNYIDMDALIIERIGMSITDFFAKEGEAKFREIESQVLAELADSDQVISTGGGVVINPINREILAKNPETIYLKSDFETLYDRIEHDTENVRPLFVNNSKEAFKEIFDGRQEMYEAAANRIIDVAGKTPEEIVEEIG
>NZ_CP013688.1|WP_058621523.1|593848_594673_+|prephenate-dehydratase
MKVGYLGPSASFTHNVAVKAFPEANRMPFANITEVIKSYEEGFVDYAIIPVENSIEGSVHETLDYLFHQAEIEAIAEIIQPIKQQLLATTQTKKIEKIFSHPQAIAQGKKYINAHYPAAKIEMTASTAYAARFIAEHPEENFAAIAPVAAAKEYGLEIIAQDIQEMDENYTRFWVLGHQKRSFDLAKLNQKVSLALTLPDNLPGALYKALSVFAWRGIDLTKIESRPLKTALGEYFFIVDVENKNDTLVSFALEELSVLGIDYKILGRYDVYKL
>NZ_CP013688.1|WP_058621524.1|594747_596181_+|LCP-family-protein
MTRSNLSRHEELRYEYLLSNLEYLSAREKQEFDYLYNKKQAGEVSESPSSQPSSAYNDNYYDDYYDDAYDNQMDYYDDDNWTSQGLPKYPEEKKQSKRSFRRTSEQQSEIFPTYQDNYDEAFYQEPEPVTPKKAKKPKKKRRRIRIKRLLKLLGFLVILVMAGMIYMFFKGVNDVSTGETNYTAAVTETFNGEDSDDGTNILILGSDQRITQGSSDARTDTIMVMNIGNSDGKIKLVSFMRDTLVNIDGVSYNAYSNDQKLNVAFNIGEQDDNQGAELMRQTLKDNFDINIKYYVMVDFETFAEAIDTLFPNGVEIDAKFGTVDGQAVSSVEVPDDLNMQADGTVPNQTIEVGTQKMDGRTLLNYARFRKDDDGDYGRTQRQQQVISAIINQIKDPSKLFTGSAAIGNIYALTSTNISYPFLLKEGLSLITSGQEGIEQTTIPAEGDWTDDYDMYGGLGIAIDFDKYQEELKELGLR
>NZ_CP013688.1|WP_058621525.1|596290_597652_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MLSKNAIVDAEITDLSHEGAGVAKVDGFVFFVENALPGEKIKMRILKVKKNIGFGKVEEYVTISEHRNQDLNVDYLRTGIADFGHLAYAEQLKFKRKQVMDNLYKTAGISDVEVSETLGMAHPYAYRNKAQVPVRRVNGQLETGFFRKHSHDLMPISDYYIQNKEIDRLINFTRDLLRRFDLKPYDEKEQTGLIRNLVVRRGHYSGEMMLVFVTTRPKVFRIEQIIEKIVAEFPAVKSIVQNINDKNTNAIFGKEFKTLYGKDTIVDSMLGNQYEISARSFYQVNTEMAERLYQTAIDFSDLTPEDIVIDAYSGIGTIGLSFAKNVKAVYGVEVIEEAVEDAKRNAALNGITNAHYVADSAEHAMATWSKDGIKPSVILVDPPRKGLTENFIKASVAMQPEKITYISCNPATMARDIKLYQELGYKLQKVQPVDLFPNTHHVECVVLMSRVNK
>NZ_CP013688.1|WP_058621526.1|597860_598283_+|hypothetical-protein
MTTNDEQIIDEIIDSYIQLPARGGRQQRQEKTHQEWKRILQRESRNGFGQNSVLVHRAIRTSGKAYLSTKQVFVSTNFVVYTMSTYEEALLLSTWMTTIFYQLICEVTSKDQEGMRKMEVADINTTFIPQLDMISLNTRN
>NZ_CP013688.1|WP_158526993.1|598283_598829_+|L-ribulose-5-phosphate-4-epimerase
MNEIKDEIVFLNLKNPEIRLKYDNDSKYYVYLYKHFANIKAVVHTHSTNTVAWAQAGRFLPVYGTTHANTFYSEVPITRHLTNEEVTESYEWNTGKVIVEAFENQNLDPSAIPTVLVNGHGPFTWRTTTQKAIENSLVLDECCQMAQMTKSVRSNAEKLPQYVLDKHYYRNHGANAYYGQN
>NZ_CP013688.1|WP_082306723.1|599809_600289_-|hypothetical-protein
MLNLLIHSLFNRDWKLILKKEELLNGTEYRYHRLFKGTVTERGIIDYILSLDESLRLNYNAYQTIVFTVTHRKPDLFQSFIHEKQRGLSAKMDQALKTFRQSERAIVNALSYDYSNGLVEGINNKIKVIKRTAYGYRNFSNFRNRIFIEYKLLETKTAA
>NZ_CP013688.1|WP_082306724.1|600209_600446_+|IS3-family-transposase
MPFNSSSFFRINFQSLLKREWINRFKIRDYQQANRLVFEYIEAFYNTKRIHGYCGYMSPNDSESLYEKTKDSRLQLAG

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Crispr_ID: NZ_CP013688_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013688_4

1673077-1673158

Orphan

Consensus_repeat	Method
AATAACATTCAAGTGTTTGTTTGAATA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP013688_4

>merge|NZ_CP013688|4|1673077-1673158|CRISPRCasFinder
AATAACATTCAAGTGTTTGTTTGAATATTTACAAATATATAATAACAGATTAAAGAATAACATTCAAGTGTTTGTTTGAATA

>NZ_CP013688|4|4|1673077-1673158|CRISPRCasFinder
AATAACATTCAAGTGTTTGTTTGAATA	TTTACAAATATATAATAACAGATTAAAG
AATAACATTCAAGTGTTTGTTTGAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013688.1\|WP_039670458.1\|1660482_1661049_+\|alkaline-shock-response-membrane-anchor-protein-AmaP	unknown	unknown	gnl\|CDD\|380217
NZ_CP013688.1\|WP_014293929.1\|1680693_1681575_-\|fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|180926
NZ_CP013688.1\|WP_039670436.1\|1676675_1677233_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_058621900.1\|1669928_1670159_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378900
NZ_CP013688.1\|WP_014293939.1\|1661885_1662089_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP013688.1\|WP_058621896.1\|1663829_1664936_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_CP013688.1\|WP_058621898.1\|1666531_1668226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_039670456.1\|1661246_1661813_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP013688.1\|WP_158526999.1\|1669547_1669700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_158527005.1\|1673285_1673789_+\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|376504
NZ_CP013688.1\|WP_002952225.1\|1661061_1661232_+\|DUF2273-domain-containing-protein	unknown	unknown	gnl\|CDD\|227834
NZ_CP013688.1\|WP_058621905.1\|1681924_1682860_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP013688.1\|WP_021144867.1\|1676441_1676672_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013688.1\|WP_058621904.1\|1678476_1678887_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|372239
NZ_CP013688.1\|WP_039670424.1\|1670935_1673059_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319845
NZ_CP013688.1\|WP_058621902.1\|1673959_1674295_-\|Cd(II)-sensing-metalloregulatory-transcriptional-repressor-CadC	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
NZ_CP013688.1\|WP_058621903.1\|1677244_1678240_+\|conjugal-transfer-protein	unknown	unknown	gnl\|CDD\|372237
NZ_CP013688.1\|WP_058621897.1\|1664935_1666399_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP013688.1\|WP_158527000.1\|1674466_1675611_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013688.1\|WP_021144863.1\|1678249_1678474_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013688.1\|WP_039670458.1\|1660482_1661049_+\|alkaline-shock-response-membrane-anchor-protein-AmaP	gnl\|CDD\|380217	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP. The founding member of this family, AmaP (Asp23 membrane anchoring protein), is related to Asp23 through part of its length, but includes a highly hydrophobic N-terminal region that should make it an integral membrane protein. Asp23 (alkaline shock protein of 23 kDa), described in PMID:7864904, is a cytosolic protein in Staphylococcus aureus, strongly induced by a pH shift from 7 to 10, and also recruited to the membrane. AmaP appears to be the partner protein with an integral membrane segment and the ability to anchor Asp23 to the membrane. This model was built to identify full-length homologs of AmaP, while excluding Asp23. Some but not all members of this family score above the cutoffs of Pfam model version PF03780.11, but full-length homologs of Asp23 score considerably higher. Asp23 family members previously were known as DUF322.	6.61703e-44
NZ_CP013688.1\|WP_014293929.1\|1680693_1681575_-\|fructose-bisphosphate-aldolase	gnl\|CDD\|180926	PRK07315, PRK07315, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP013688.1\|WP_058621903.1\|1677244_1678240_+\|conjugal-transfer-protein	gnl\|CDD\|372237	pfam12642, TpcC, Conjugative transposon protein TcpC. This family of proteins are annotated as conjugative transposon protein TcpC. The transfer clostridial plasmid (tcp) locus is part of some conjugative antibiotic resistance and virulence plasmids. TcpC was one of five genes whose products had low-level sequence identity to Tn916 proteins, having similarity to ORF13 homologs from Tn916, Tn5397, and CW459tet. This family of proteins is found in bacteria. Proteins in this family are typically between 302 and 351 amino acids in length.	1.41914e-35
NZ_CP013688.1\|WP_058621900.1\|1669928_1670159_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378900	pfam12645, HTH_16, Helix-turn-helix domain. This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.	1.84942e-23
NZ_CP013688.1\|WP_014293939.1\|1661885_1662089_+\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	0.000395056
NZ_CP013688.1\|WP_058621902.1\|1673959_1674295_-\|Cd(II)-sensing-metalloregulatory-transcriptional-repressor-CadC	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	6.83583e-15
NZ_CP013688.1\|WP_158527000.1\|1674466_1675611_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.67704e-43
NZ_CP013688.1\|WP_039670456.1\|1661246_1661813_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.23894e-32
NZ_CP013688.1\|WP_058621896.1\|1663829_1664936_-\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	2.25711e-78
NZ_CP013688.1\|WP_158527005.1\|1673285_1673789_+\|signal-peptidase-II	gnl\|CDD\|376504	pfam01252, Peptidase_A8, Signal peptidase (SPase) II.	2.23236e-38
NZ_CP013688.1\|WP_002952225.1\|1661061_1661232_+\|DUF2273-domain-containing-protein	gnl\|CDD\|227834	COG5547, COG5547, Small integral membrane protein [Function unknown].	1.47121e-10
NZ_CP013688.1\|WP_058621905.1\|1681924_1682860_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	5.84472e-29
NZ_CP013688.1\|WP_058621904.1\|1678476_1678887_+\|conjugal-transfer-protein	gnl\|CDD\|372239	pfam12648, TcpE, TcpE family. This family of proteins includes TcpE a conjugative transposon membrane protein.This family of proteins is found in bacteria. Proteins in this family are typically between 122 and 168 amino acids in length.	1.08988e-27
NZ_CP013688.1\|WP_039670424.1\|1670935_1673059_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319845	cd07545, P-type_ATPase_Cd-like, P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase. CadA from gram-positive Staphylococcus aureus plasmid pI258 is required for full Cd(2+) and Zn(2+) resistance. This subfamily also includes CadA, from the gram-negative bacilli, Stenotrophomonas maltophilia D457R, which is a cadmium efflux pump acquired as part of a cluster of antibiotic and heavy metal resistance genes from gram-positive bacteria. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP013688.1\|WP_058621897.1\|1664935_1666399_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	4.18272e-06

>NZ_CP013688.1|WP_039670424.1|1670935_1673059_-|cadmium-translocating-P-type-ATPase
MSKASKQTTYRVDGLSCTNCAGKFEKNVKNISGVTDAKVNFGAGKITVYGETSISQIEKAGAFENLKISPEKDYSNTPLKKESFLKKNWHLVVSVVFILLAFISQNISGEDSTITIALYVVAIIIGGFSLFKEGISNLLKLDFTMESLMTIAIIGASIIGEWAEGSIVVILFALSEVLERYSMDKARQSIRSLMDIAPKEALIRRNNVEQMIAVSDIQIGDIMIIKPGQKIAMDGVVIKGYSAINQSAITGESIPVEKKVDDEVFAGTLNEEGLLEVKVTKHVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPIIMLIALLVAVVPPLFFGGDWDTWVYQGLSLLVVGCPCSLVISTPVSIVSAIGNSAKNGVLVKGGIYLEEIGGLQAIAFDKTGTLTKGKPVVTDFIPYSQHMDEQKSLSIITALETLSQHPLASAIISKAMIDNVDYKSIEIDNFSSITGKGVKGDVDGITYYIGSSKLFESSLEKSQSISQTYQSLQKQGKTAMLFGTESNILAIIAVADEVRESSKEVIAQLHKLGIAHTIMLTGDNNDTAQFIGKEIGVSDIKAELMPEDKLTYIKELKQTYGKVAMIGDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLKKLPFIVNLSRKTLKIIKQNITFSLGIKLLALLLVLPGWLTLWIAIVADMGATLLVTLNGLRLMKVKK
>NZ_CP013688.1|WP_058621900.1|1669928_1670159_-|helix-turn-helix-domain-containing-protein
MKPTKEVLSFTVILLAVHGDVNAINEILKHFEHYTIRLSQKTLFDEYGNPYIHVEEETKRMLETKLITAILKFDLS
>NZ_CP013688.1|WP_158526999.1|1669547_1669700_-|hypothetical-protein
MEWLFCRNLYHSIMIHPYDTVLPTRMGLVEIPVELAKAIYLLSNYKHRKE
>NZ_CP013688.1|WP_058621898.1|1666531_1668226_-|hypothetical-protein
MANENVLQNEAIKDFDFEAMEDLISQQLEDQIADLEVIKEQRDKIGTPENLVNAVIDAAVEEFNNNIAQQFGEDFIRNNGGLNLDLSRDAHFQTVDNFADGKFAEHNPHAGEYQQKHEAMQSNFEKDAQGNIRYHTDRSGKTKEKLVKGARTPYDKNRPSGSKERGTDMDHTMSAGELMRDPAANLYMSEDARIAFANSPQNLNEINSAWNQSKGDLSMEDWLNHPNANGQTPKEIWGITDNQEKALRKKDNEARQAKQNAEQAGKDEIEELGKASRRDEGVRILKGAGKAVLMPLLAGFVKEVLKEMIIWIKEKGRKLNTLMDHFKSALSNFIRNLKENLFQSTRTAVTTVVTAIFGEVVTVINKAITFLKQSWKTVKDVMTYMKSPNHKRESSVEMMSGISKIVVTGLATVGTIALSEVVGKGLVAVFPALAAGGIADMIGLLISGIVIAIISMLIMRQIDKFIDNKLKEESSKAIIAKQNEILNLQEQQIAVAGAKIEVKRRNTQNFIQQTQENARAALKRISDNDNIEISKIDFISENKSELYRQQKELDSLSKVLDDLL
>NZ_CP013688.1|WP_058621897.1|1664935_1666399_-|hypothetical-protein
MNNDKLNKLKVFLSWAYPKGSSFEKADLDMLDINAYVENQGWQEIYYLIDVLVKEGFLTKDYRFGKYFYQINFSKTTEKDNKIVEKTKSNSRNKKAQSNTIVARDNKEKKQTVEQNTGDTSLQLAKKVNELEKKKKEIESLVRSINSSENLPTVAKKGGLFGWFDYKVTGEELNNFTSKVQSKLIGQNQAIKKTTQEFGSVYTSIIETLGLVNVSLAGAVKASNQAHEAGVKAGKNAAKVKTAQDDIKDLVINNDKLVQDHKKVIQVLKTHKEKLDEIEHITDVDKLYSDFYVKSQELEKENNKISEQIITVSSEIETLKTELDDLSDTIRNFAESLSKEMEAQKTETDASVLQVTQNLKDIQSETESKVETLSSDINKVVLNQKKCFDEKLDHLDDTVKKLEESNLEKIHELKNTSDEAFAKIAKKIEENQNESLTQVKSIYSEMEEQLNELKEYFQNQLKRTRLLAIISFIAFIILLVLILSEVI
>NZ_CP013688.1|WP_058621896.1|1663829_1664936_-|AAA-family-ATPase
MISESYKIKLEKEAKKLDIIYGTENEFEKLVAEIATDIAGQASLLFLKKIGEEQKKINSPKTSKFPNEARELLFTFLGSKQIENMVDVLKEEANFSLPELLHNLDTLVGLENVKRQVTDLITYNQIQHLRTKKGLAKSNRTLHMAFLGNPGTGKTTVARIVGHMYKAIGLLSKGQFIEASRTDLIAEYQGQTAIKVKRLINRAKGGVLFIDEAYSITENNHTDSYGKESLTEFTKALEDYRDDLVVIVAGYTDLMEQFFESNPGLKSRFNSFIFFEDYSIDELVEIFKNICEESDYSVDEVMIEKVRLWLQNKLDEKNGNFANGRVVRNLFDDITMNQAKRLVRDAHEELDKNLLEKLLPEDVPELKG
>NZ_CP013688.1|WP_014293939.1|1661885_1662089_+|CsbD-family-protein
MSVEEKLNQAKGAIKEGVGKVTDDKKTEKEGAAEKGVSKVKEVAKDAKDAVEGTIEGVKNMVKKDDK
>NZ_CP013688.1|WP_039670456.1|1661246_1661813_+|Asp23/Gls24-family-envelope-stress-response-protein
MSNVEQKVKEVKEVKGELTYEDKVIQKIIGLSLENVPGLLDIDGGFFSKLTGKLINTDNVASGINVEVGKKQVAVDLKAVVEYQKNIPELYKKIKEIVVSEISNMTNLEVVEVNVDVVDIKTKEQHEADSVSLQDRATGVVESTSEFTSDKFESAKEGLSDGFSAAKEKVKGVAEDTKETAKAEPRVH
>NZ_CP013688.1|WP_002952225.1|1661061_1661232_+|DUF2273-domain-containing-protein
MEWFKKYQYLLLSGLAGAILACFILSYGFFKTLFVLICATLGVGIGYYIQQKQLFK
>NZ_CP013688.1|WP_039670458.1|1660482_1661049_+|alkaline-shock-response-membrane-anchor-protein-AmaP
MSKNKKIFYLILCILILTILIPILLDYLKFSGLGLHLVGWNKNSFLEFYLSRYIFWGALVLSAVVLFLMLVTLFYPKQYLEIQLPDVDGNLKLKNSAIEGFVRCVVANHNFIKDPTIKVDCRKNKCLVHVEGQMLPSDNIIKQTQIIKDEIADGLKQFFGLNHRVKLYISVKEYKPKPPRKKTISRVK
>NZ_CP013688.1|WP_158527005.1|1673285_1673789_+|signal-peptidase-II
MLNGKIISKQNLLLLGIMISAVLIDQLSKIWLTSTLQIGESIELIPSFFKITYAQNTGAAWSVLEGHMTFFYVVTIIALILLGWYFKNLKDYQIVQKIGVILMIAGTLGNFIDRLLFQFVRDSLYFRILDYNFPIFNIADILLVSGVFLLIIDETIKTFNIRSKLKK
>NZ_CP013688.1|WP_058621902.1|1673959_1674295_-|Cd(II)-sensing-metalloregulatory-transcriptional-repressor-CadC
MKDICEKTCFDEEKVQKIQTSLVDKKLNNISQIFKALSEETRITIAYALTLEKELCVCDISIIVNSTVATTSHHLKILSKAGVVQNKKVGKLVYYSLNNSLVERLIKDIVL
>NZ_CP013688.1|WP_158527000.1|1674466_1675611_-|IS3-family-transposase
MTNNRYEPELKQKVLRLYLEEGRTKKSLTEEYNLGQGTLTYWLQQYRKECDNSPTKREESDSYEVAKKLRKEIEELKKENDFLKKSSSILCEGNRLAQYQFIQKYQQTFGVRWLLRRMNICPNAYYNYLKNKKHAYRQEKAEIQRKIVEIYHRENGVPGYRMMNDYLKGIGSIRSDLTIHHFMNELGLRSITRRKKPNYVKGTANKIFPNLLNREFDVKEPNKIWCTDFTYLTRPDGTMRYNCTIIDLCGREVVASLNSSHIDTELAKETLKIALERRKPAKGIILHSEQGRQFTAKEFNKFCDKNYVQQSMSKAGCPYDNAVMERFYNTLKHEFYYLYKFDSNDILDQKLYEFVYGKYNHVRPHRANGGLTPYAARCRAA
>NZ_CP013688.1|WP_021144867.1|1676441_1676672_+|hypothetical-protein
MEYKVEINSLNNFKAWSGGLSTLNTVRERGGIDTLTTICEDLFSGNTPTDTQINDWLWFDTDFIYQALGYEDLLEG
>NZ_CP013688.1|WP_039670436.1|1676675_1677233_+|hypothetical-protein
MLKKIYQADFLLLPDQEFWNMYILLRKGKDFYYECAGRCTEKPPDDRGFYDYEHACFTLDGQVLSLNKRMRPSLIAYIQQTIKINHKTFRKEIDMATKTIFETKVGQVTNELGELLKKKDHKQAWTKAGELNALLKKEEVKDLKPEFVEQLHNELRGYYYINSEIEKANKRLYAKGSKLIELASL
>NZ_CP013688.1|WP_058621903.1|1677244_1678240_+|conjugal-transfer-protein
MIKAKRYLLKAREFLSNFKKVDKKGGPPKLKVTTKKTINIAVIGGIAFLLFVGLMGSIRAITLSNKVGALQTQVEATQKQKAQPMDANRKYDYKLQYYLNDYVYAYFTLPQEGDKQQEQVEHLNSFYNFVPDVKAQGQVRNPSILLYSQLVTVEGKVATYKVKYKEIIQHDKDTEEKELVTGFNIPFDEKEGKYYVSGLPWFSAIDSSQAGHFGEDDQLQLTANDHASDSQHKKVEKFLKVFFTNYTTNQDNLNLIAKNITIVANTTFKTIDYTYLKKDGAGLIAYVQATFEVGGTTHSENFTFTLTEKDKSYYVTKLEHTIPLNYANDKD
>NZ_CP013688.1|WP_021144863.1|1678249_1678474_+|hypothetical-protein
MNTDNLRTFLQGDGIWILTAIAVLLAIKAWRNSSWLQLFSVVGFYAVIVSIAKGQDILKVVGWFLRLFGIDSGL
>NZ_CP013688.1|WP_058621904.1|1678476_1678887_+|conjugal-transfer-protein
MTEERLYDYSKGLNAPYWIQEIKTKKGTRLWYFATPMQLSFFIVFTFVFVAMLLFGGFILVPLAKFTHSISLLLYWYLPYKLAKFYTEYEPHGKKMHVFIGDYLIYFWDFKLNKKAIYHEDRIEPVEEIVFEKTNL
>NZ_CP013688.1|WP_014293929.1|1680693_1681575_-|fructose-bisphosphate-aldolase
MAIVSAEKFVKAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPILIQTSMGAAKYMGGYKLCKALIENLVESMGITVPVAIHLDHGHFEDALECIEVGYTSVMFDGSHLPVEENLKLAKEVVEKAHAKGISVEAEVGSIGGEEDGIIGEGELAPIEDAKAMVETGIDFLAAGIGNIHGPYPENWKGLHLDHLQKLTEAVPGFPIVLHGGSGIPDDQIQAAIKLGVAKVNVNTECQLAFAKATRKFVAEYEANEEEYDKKKLFDPRKFLKPGFEAITEAVEERIDVFGSANKA
>NZ_CP013688.1|WP_058621905.1|1681924_1682860_-|alpha/beta-hydrolase
MRKIRIRKRRILLGIIALLFVVSVGASFYFFHVAQIREEKSFINNNGRSKDNPLYAYEQSFNQLTKETLWMTNQGLKQDAWYIPAETATNKTVIVVHGFTNDKEDMKPYAWMFHELGYNVLMPDNMSHGDSEGQIIGYGWNDRLNVIKWAELLVEQNSDSEITLFGVSMGAATVMMASGEESLPDQVVNIIEDCGYSSVWDELKYQAKEMYNLPAFPILYEVSAISKIRAGFSYGQASSVNQLKNNTRPVLFIHGGDDTFVPTSMVYKNYQATQGEKELYIVKGAGHAKCFETDPQSYIEKISTFLKKYEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	MK448899	Streptococcus phage Javan288, complete genome	15737-15766	0	1.0
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	KY705274	Streptococcus phage P7631, complete genome	1607-1636	0	1.0
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	KY705275	Streptococcus phage P7632, complete genome	1821-1850	0	1.0
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	MG708275	Streptococcus phage vB_SthS_VA460, complete genome	7879-7908	0	1.0
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	KY705251	Streptococcus phage P0091, complete genome	1438-1467	0	1.0
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937490	Streptococcus phage CHPC1036, complete genome	1495-1524	0	1.0
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	NZ_LN774771	Lactococcus piscium MKFS47 plasmid III, complete sequence	37741-37768	0	1.0
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	KC348601	Streptococcus phage phi7917, complete genome	26128-26157	1	0.967
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	KX077890	Streptococcus phage phiLP081102, complete genome	28227-28256	1	0.967
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	KC348602	Streptococcus phage phi891591, complete genome	25762-25791	1	0.967
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448988	Streptococcus phage Javan578, complete genome	9663-9692	1	0.967
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	KC413987	Streptococcus phage phiSS12, complete genome	27353-27382	1	0.967
NZ_CP013688_3	3.8\|588766\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588766-588795	30	MH937506	Streptococcus phage CHPC1148, complete genome	23640-23669	1	0.967
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937474	Streptococcus phage CHPC930, complete genome	1469-1498	1	0.967
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937458	Streptococcus phage CHPC572, complete genome	1507-1536	1	0.967
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	NC_002185	Streptococcus phage 7201, complete genome	12735-12764	1	0.967
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	AF145054	Streptococcus thermophilus bacteriophage 7201, complete genome	12735-12764	1	0.967
NZ_CP013688_3	3.22\|589689\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589689-589718	30	MH937509	Streptococcus phage CHPC1230, complete genome	26162-26191	1	0.967
NZ_CP013688_3	3.3\|588435\|31\|NZ_CP013688\|CRISPRCasFinder,CRT	588435-588465	31	MK448931	Streptococcus phage Javan414, complete genome	3826-3856	2	0.935
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	MH937468	Streptococcus phage CHPC879, complete genome	597-626	2	0.933
NZ_CP013688_3	3.11\|588964\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588964-588993	30	MK448879	Streptococcus phage Javan226, complete genome	28581-28610	2	0.933
NZ_CP013688_3	3.11\|588964\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588964-588993	30	MK448931	Streptococcus phage Javan414, complete genome	28943-28972	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937495	Streptococcus phage CHPC1045, complete genome	1472-1501	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580775	Streptococcus phage V2, complete genome	1656-1685	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937496	Streptococcus phage CHPC1046, complete genome	1459-1488	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580762	Streptococcus phage 9B4, complete genome	1656-1685	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937493	Streptococcus phage CHPC1041, complete genome	1550-1579	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580760	Streptococcus phage 7T, complete genome	1420-1449	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH892379	Streptococcus phage SWK3, complete genome	2126-2155	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580773	Streptococcus phage STP1, complete genome	1437-1466	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	KY705288	Streptococcus phage P9901, complete genome	1440-1469	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580766	Streptococcus phage B0, complete genome	1437-1466	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	KY705263	Streptococcus phage P7133, complete genome	1678-1707	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH892356	Streptococcus phage SW21, complete genome	2152-2181	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580763	Streptococcus phage 16B8, complete genome	1437-1466	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH892358	Streptococcus phage SW9, complete genome	2153-2182	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580772	Streptococcus phage R1, complete genome	1656-1685	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580774	Streptococcus phage STP2, complete genome	1425-1454	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580764	Streptococcus phage 31B4, complete genome	1656-1685	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937497	Streptococcus phage CHPC1048, complete genome	1482-1511	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580759	Streptococcus phage 7A5, complete genome	1656-1685	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH892352	Streptococcus phage SW1, complete genome	2055-2084	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MF580767	Streptococcus phage B5, complete genome	1678-1707	2	0.933
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH892380	Streptococcus phage SWK4, complete genome	2126-2155	2	0.933
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448775	Streptococcus phage Javan489, complete genome	10532-10561	3	0.9
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448794	Streptococcus phage Javan525, complete genome	8727-8756	3	0.9
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448763	Streptococcus phage Javan451, complete genome	7757-7786	3	0.9
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448777	Streptococcus phage Javan491, complete genome	6856-6885	3	0.9
NZ_CP013688_3	3.2\|588369\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588369-588398	30	MK448765	Streptococcus phage Javan459, complete genome	8727-8756	3	0.9
NZ_CP013688_3	3.3\|588435\|31\|NZ_CP013688\|CRISPRCasFinder,CRT	588435-588465	31	MK448709	Streptococcus phage Javan231, complete genome	8456-8486	3	0.903
NZ_CP013688_3	3.3\|588435\|31\|NZ_CP013688\|CRISPRCasFinder,CRT	588435-588465	31	MK448710	Streptococcus phage Javan233, complete genome	8456-8486	3	0.903
NZ_CP013688_3	3.16\|589294\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589294-589323	30	MK448899	Streptococcus phage Javan288, complete genome	12330-12359	3	0.9
NZ_CP013688_3	3.12\|589030\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589030-589059	30	MK448875	Streptococcus phage Javan210, complete genome	31253-31282	4	0.867
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	819929-819958	5	0.833
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	MH937506	Streptococcus phage CHPC1148, complete genome	1442-1471	5	0.833
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	AP013442	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22-MedDCM-OCT-S36-C18	25210-25237	5	0.821
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	AP014433	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S41-C103, * SEQUENCING IN PROGRESS *, 6 ordered pieces	20367-20394	5	0.821
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	164383-164412	6	0.8
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	173504-173533	6	0.8
NZ_CP013688_3	3.12\|589030\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589030-589059	30	KF926093	Lactococcus phage phiL47, complete genome	93137-93166	6	0.8
NZ_CP013688_3	3.13\|589096\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589096-589125	30	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	2741-2770	6	0.8
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	22395-22423	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	110591-110619	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	544229-544257	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	715261-715289	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	544278-544306	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	715277-715305	6	0.793
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	645877-645905	6	0.793
NZ_CP013688_3	3.20\|589557\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589557-589586	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	165704-165733	6	0.8
NZ_CP013688_3	3.20\|589557\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589557-589586	30	NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	41877-41906	6	0.8
NZ_CP013688_3	3.20\|589557\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589557-589586	30	MN694154	Marine virus AFVG_250M77, complete genome	14717-14746	6	0.8
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	NZ_CP028874	Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence	47837-47864	6	0.786
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	NZ_CP053316	Bacillus circulans strain GN03 plasmid unnamed, complete sequence	59347-59374	6	0.786
NZ_CP013688_3	3.3\|588435\|31\|NZ_CP013688\|CRISPRCasFinder,CRT	588435-588465	31	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	167793-167823	7	0.774
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	NZ_AP014817	Geminocystis sp. NIES-3708 plasmid pGM02, complete sequence	51608-51637	7	0.767
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	NZ_LR134428	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 19	7486-7515	7	0.767
NZ_CP013688_3	3.8\|588766\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588766-588795	30	NZ_CP039606	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014868 plasmid p12-6919.3, complete sequence	2436-2465	7	0.767
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	35066-35095	7	0.767
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	37465-37494	7	0.767
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	39877-39906	7	0.767
NZ_CP013688_3	3.12\|589030\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589030-589059	30	MK448702	Streptococcus phage Javan199, complete genome	5219-5248	7	0.767
NZ_CP013688_3	3.22\|589689\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589689-589718	30	MN098325	Staphylococcus phage Portland, complete genome	344-373	7	0.767
NZ_CP013688_4	4.1\|1673104\|28\|NZ_CP013688\|CRISPRCasFinder	1673104-1673131	28	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	80642-80669	7	0.75
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	MN693414	Marine virus AFVG_25M246, complete genome	5405-5434	8	0.733
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	MN693065	Marine virus AFVG_25M245, complete genome	7762-7791	8	0.733
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	MN693386	Marine virus AFVG_25M538, complete genome	26924-26953	8	0.733
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	MN693115	Marine virus AFVG_25M537, complete genome	32230-32259	8	0.733
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	MN693042	Marine virus AFVG_25M244, complete genome	27499-27528	8	0.733
NZ_CP013688_3	3.6\|588634\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588634-588663	30	NZ_CP021437	Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence	225010-225039	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	277368-277397	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	3690-3719	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_LR214977	Mycoplasma cynos strain NCTC10142 plasmid 4	2222-2251	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_LR214977	Mycoplasma cynos strain NCTC10142 plasmid 4	3639-3668	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	919366-919395	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	6683-6712	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	20538-20567	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	NZ_CP032657	Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence	10503-10532	8	0.733
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	MN693089	Marine virus AFVG_25M562, complete genome	765-794	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	MN038176	Bacillus phage Phireball, complete genome	159191-159220	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	NC_031006	Bacillus phage DIGNKC, complete genome	158530-158559	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	KX349902	Bacillus phage Kida, complete genome	159283-159312	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	MF288917	Bacillus phage PPIsBest, complete genome	159438-159467	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	NC_007581	Clostridium phage c-st, complete genome	119836-119865	8	0.733
NZ_CP013688_3	3.14\|589162\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589162-589191	30	AP008983	Clostridium phage c-st genomic DNA, complete genome	119836-119865	8	0.733
NZ_CP013688_3	3.15\|589228\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589228-589257	30	NZ_CP032532	Bacillus megaterium NCT-2 plasmid pNCT2_4, complete sequence	9392-9421	8	0.733
NZ_CP013688_3	3.15\|589228\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589228-589257	30	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	177436-177465	8	0.733
NZ_CP013688_3	3.15\|589228\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589228-589257	30	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	245695-245724	8	0.733
NZ_CP013688_3	3.15\|589228\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589228-589257	30	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	76450-76479	8	0.733
NZ_CP013688_3	3.15\|589228\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589228-589257	30	MK448692	Streptococcus phage Javan173, complete genome	2113-2142	8	0.733
NZ_CP013688_3	3.16\|589294\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589294-589323	30	MG945380	UNVERIFIED: Microviridae sp. isolate 8493-1612, partial genome	1571-1600	8	0.733
NZ_CP013688_3	3.17\|589360\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589360-589389	30	NZ_CP021745	Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence	64995-65024	8	0.733
NZ_CP013688_3	3.17\|589360\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589360-589389	30	MH590589	Streptomyces phage SparkleGoddess, complete genome	28591-28620	8	0.733
NZ_CP013688_3	3.18\|589426\|29\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589426-589454	29	NC_016850	Aliivibrio fischeri strain CG103 plasmid pCG103-32, complete sequence	10171-10199	8	0.724
NZ_CP013688_3	3.19\|589491\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589491-589520	30	NZ_CP041156	Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence	124665-124694	8	0.733
NZ_CP013688_3	3.20\|589557\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589557-589586	30	NC_004953	Corynebacterium jeikeium plasmid pCJ84, complete sequence	5159-5188	8	0.733
NZ_CP013688_3	3.8\|588766\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588766-588795	30	MF161328	Streptococcus phage D4276, complete genome	26348-26377	9	0.7
NZ_CP013688_3	3.10\|588898\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	588898-588927	30	KT895374	Bacillus phage vB_BpuM-BpSp, complete genome	247479-247508	9	0.7
NZ_CP013688_3	3.20\|589557\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589557-589586	30	NC_003490	Corynebacterium jeikeium plasmid pB85766, complete sequence	11270-11299	9	0.7
NZ_CP013688_3	3.21\|589623\|30\|NZ_CP013688\|CRISPRCasFinder,CRT,PILER-CR	589623-589652	30	MN693698	Marine virus AFVG_250M751, complete genome	29070-29099	9	0.7
NZ_CP013688_3	3.5\|588568\|30\|NZ_CP013688\|CRISPRCasFinder,CRT	588568-588597	30	JQ340088	Halocynthia phage JM-2012, complete genome	89473-89502	10	0.667

1. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448899 (Streptococcus phage Javan288, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaagggacgagataaagaacaattact	CRISPR spacer
gaaaaagggacgagataaagaacaattact	Protospacer
******************************

2. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KY705274 (Streptococcus phage P7631, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaagggacgagataaagaacaattact	CRISPR spacer
gaaaaagggacgagataaagaacaattact	Protospacer
******************************

3. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KY705275 (Streptococcus phage P7632, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaagggacgagataaagaacaattact	CRISPR spacer
gaaaaagggacgagataaagaacaattact	Protospacer
******************************

4. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MG708275 (Streptococcus phage vB_SthS_VA460, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaagggacgagataaagaacaattact	CRISPR spacer
gaaaaagggacgagataaagaacaattact	Protospacer
******************************

5. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KY705251 (Streptococcus phage P0091, complete genome) position: , mismatch: 0, identity: 1.0

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctgatcatcaccagaacg	Protospacer
******************************

6. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937490 (Streptococcus phage CHPC1036, complete genome) position: , mismatch: 0, identity: 1.0

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctgatcatcaccagaacg	Protospacer
******************************

7. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to NZ_LN774771 (Lactococcus piscium MKFS47 plasmid III, complete sequence) position: , mismatch: 0, identity: 1.0

tttacaaatatataataacagattaaag	CRISPR spacer
tttacaaatatataataacagattaaag	Protospacer
****************************

8. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KC348601 (Streptococcus phage phi7917, complete genome) position: , mismatch: 1, identity: 0.967

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagttttagctgacctacgcaaac	Protospacer
*******************.**********

9. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KX077890 (Streptococcus phage phiLP081102, complete genome) position: , mismatch: 1, identity: 0.967

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagttttagctgacctacgcaaac	Protospacer
*******************.**********

10. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KC348602 (Streptococcus phage phi891591, complete genome) position: , mismatch: 1, identity: 0.967

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagttttagctgacctacgcaaac	Protospacer
*******************.**********

11. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448988 (Streptococcus phage Javan578, complete genome) position: , mismatch: 1, identity: 0.967

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagttttagctgacctacgcaaac	Protospacer
*******************.**********

12. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to KC413987 (Streptococcus phage phiSS12, complete genome) position: , mismatch: 1, identity: 0.967

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagttttagctgacctacgcaaac	Protospacer
*******************.**********

13. spacer 3.8|588766|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 1, identity: 0.967

tttctcctgcacgtttatattttattttct	CRISPR spacer
tttcccctgcacgtttatattttattttct	Protospacer
****.*************************

14. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937474 (Streptococcus phage CHPC930, complete genome) position: , mismatch: 1, identity: 0.967

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctggtcatcaccagaacg	Protospacer
***************.**************

15. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937458 (Streptococcus phage CHPC572, complete genome) position: , mismatch: 1, identity: 0.967

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctggtcatcaccagaacg	Protospacer
***************.**************

16. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_002185 (Streptococcus phage 7201, complete genome) position: , mismatch: 1, identity: 0.967

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctggtcatcaccagaacg	Protospacer
***************.**************

17. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to AF145054 (Streptococcus thermophilus bacteriophage 7201, complete genome) position: , mismatch: 1, identity: 0.967

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaaacaaagctggtcatcaccagaacg	Protospacer
***************.**************

18. spacer 3.22|589689|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937509 (Streptococcus phage CHPC1230, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttcaataagtttatcgaatggtgga	CRISPR spacer
aaaagttcaataagtttatcaaatggtgga	Protospacer
********************.*********

19. spacer 3.3|588435|31|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448931 (Streptococcus phage Javan414, complete genome) position: , mismatch: 2, identity: 0.935

tcacattgacatttttcggcaaacgagcaca	CRISPR spacer
tcacattgacattgttcggcaaacgagcacg	Protospacer
************* ****************.

20. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MH937468 (Streptococcus phage CHPC879, complete genome) position: , mismatch: 2, identity: 0.933

gaaaaagggacgagataaagaacaattact	CRISPR spacer
taaaaagggacgagataaagaacaatttct	Protospacer
 ************************** **

21. spacer 3.11|588964|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448879 (Streptococcus phage Javan226, complete genome) position: , mismatch: 2, identity: 0.933

atttaagcgttaaaatgcttgcagaacctg	CRISPR spacer
atttaagcgttaaaatacttgctgaacctg	Protospacer
****************.***** *******

22. spacer 3.11|588964|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448931 (Streptococcus phage Javan414, complete genome) position: , mismatch: 2, identity: 0.933

atttaagcgttaaaatgcttgcagaacctg	CRISPR spacer
atttaagcgttaaaatacttgctgaacctg	Protospacer
****************.***** *******

23. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937495 (Streptococcus phage CHPC1045, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

24. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580775 (Streptococcus phage V2, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

25. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937496 (Streptococcus phage CHPC1046, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

26. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580762 (Streptococcus phage 9B4, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

27. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937493 (Streptococcus phage CHPC1041, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

28. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580760 (Streptococcus phage 7T, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

29. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH892379 (Streptococcus phage SWK3, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

30. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580773 (Streptococcus phage STP1, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

31. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KY705288 (Streptococcus phage P9901, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

32. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580766 (Streptococcus phage B0, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

33. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KY705263 (Streptococcus phage P7133, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

34. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH892356 (Streptococcus phage SW21, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

35. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580763 (Streptococcus phage 16B8, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

36. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH892358 (Streptococcus phage SW9, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

37. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580772 (Streptococcus phage R1, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

38. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580774 (Streptococcus phage STP2, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

39. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580764 (Streptococcus phage 31B4, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

40. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937497 (Streptococcus phage CHPC1048, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

41. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580759 (Streptococcus phage 7A5, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

42. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH892352 (Streptococcus phage SW1, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

43. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF580767 (Streptococcus phage B5, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

44. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH892380 (Streptococcus phage SWK4, complete genome) position: , mismatch: 2, identity: 0.933

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
aatcaagcaaagctggtcatcaccagaacg	Protospacer
******.********.**************

45. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.9

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagtcctagctgatctacgcaagc	Protospacer
**********..****************.*

46. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.9

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagtcctagctgatctacgcaagc	Protospacer
**********..****************.*

47. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 3, identity: 0.9

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagtcctagctgatctacgcaagc	Protospacer
**********..****************.*

48. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.9

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagtcctagctgatctacgcaagc	Protospacer
**********..****************.*

49. spacer 3.2|588369|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.9

acaagcaagttttagctgatctacgcaaac	CRISPR spacer
acaagcaagtcctagctgatctacgcaagc	Protospacer
**********..****************.*

50. spacer 3.3|588435|31|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448709 (Streptococcus phage Javan231, complete genome) position: , mismatch: 3, identity: 0.903

tcacattgacatttttcggcaaacgagcaca	CRISPR spacer
tcacattgacattgttcggtaaacgagcacg	Protospacer
************* *****.**********.

51. spacer 3.3|588435|31|NZ_CP013688|CRISPRCasFinder,CRT matches to MK448710 (Streptococcus phage Javan233, complete genome) position: , mismatch: 3, identity: 0.903

tcacattgacatttttcggcaaacgagcaca	CRISPR spacer
tcacattgacattgttcggtaaacgagcacg	Protospacer
************* *****.**********.

52. spacer 3.16|589294|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448899 (Streptococcus phage Javan288, complete genome) position: , mismatch: 3, identity: 0.9

ccagcagtctagaactcctttggattttat	CRISPR spacer
tcggcagtctagaactcctttggatttttt	Protospacer
.*.************************* *

53. spacer 3.12|589030|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448875 (Streptococcus phage Javan210, complete genome) position: , mismatch: 4, identity: 0.867

ctacttacacttacaaatggtctcgacgtg	CRISPR spacer
aggcttacacttacaaatggtctagacgtg	Protospacer
  .******************** ******

54. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 5, identity: 0.833

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttatctctttatcatttatttttttat	Protospacer
.********* **** ********** * *

55. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 5, identity: 0.833

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
gattaggcaaagctggtcatcaccagaacg	Protospacer
.**.*..********.**************

56. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to AP013442 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22-MedDCM-OCT-S36-C18) position: , mismatch: 5, identity: 0.821

tttacaaatatataataacagattaaag	CRISPR spacer
attaccaatatataataacagtttaatt	Protospacer
 **** *************** ****

57. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to AP014433 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S41-C103, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces) position: , mismatch: 5, identity: 0.821

tttacaaatatataataacagattaaag	CRISPR spacer
attaccaatatataataacagtttaatt	Protospacer
 **** *************** ****

58. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 6, identity: 0.8

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttatctcattatcatttatttgcaaca	Protospacer
.************** ******** .* *

59. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 6, identity: 0.8

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttatctcattatcatttatttgcaaca	Protospacer
.************** ******** .* *

60. spacer 3.12|589030|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 6, identity: 0.8

ctacttacacttacaaatggtctcgacgtg	CRISPR spacer
aagattacacttataaatggtctcaacgtg	Protospacer
  . *********.**********.*****

61. spacer 3.13|589096|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 6, identity: 0.8

tctcacaaagtagtggactatgatgaagaa	CRISPR spacer
taaaccaaagtagtgtactatgatgaataa	Protospacer
*    ********** *********** **

62. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

63. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

64. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

65. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

66. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

67. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

68. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 6, identity: 0.793

ctaaaccatctctggataattgcttttca	CRISPR spacer
taatatcatctttagataattgcttttca	Protospacer
. * *.*****.*.***************

69. spacer 3.20|589557|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 6, identity: 0.8

atttgagtaatgaagttataggtttaacac	CRISPR spacer
atttgagtgatgaagttatagattttgcta	Protospacer
********.************.*** .*

70. spacer 3.20|589557|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019039 (Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

----atttgagtaatgaagttataggtttaacac	CRISPR spacer
caaaatttaag----gaatttataggtttaacac	Protospacer
    ****.**    *** ***************

71. spacer 3.20|589557|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MN694154 (Marine virus AFVG_250M77, complete genome) position: , mismatch: 6, identity: 0.8

atttgagtaatgaagttataggtttaacac	CRISPR spacer
atataaacgatgaatttataggtttaacac	Protospacer
** *.*...***** ***************

72. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to NZ_CP028874 (Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence) position: , mismatch: 6, identity: 0.786

tttacaaatatataataacagattaaag	CRISPR spacer
ggtataaatatataataacagatactag	Protospacer
  **.******************   **

73. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to NZ_CP053316 (Bacillus circulans strain GN03 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tttacaaatatataataacagattaaag	CRISPR spacer
aatttaaatatataataaccaattaaag	Protospacer
  * .************** .*******

74. spacer 3.3|588435|31|NZ_CP013688|CRISPRCasFinder,CRT matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 7, identity: 0.774

tcacattgacatttttcggcaaacg-agcaca	CRISPR spacer
tcagattgatatttttcggcaaaaacgacac-	Protospacer
*** *****.************* . ..***

75. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to NZ_AP014817 (Geminocystis sp. NIES-3708 plasmid pGM02, complete sequence) position: , mismatch: 7, identity: 0.767

gaaaaagggacgagataaagaacaattact	CRISPR spacer
gggaaagggatgagattaagaacaatttta	Protospacer
*..*******.***** ********** .

76. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to NZ_LR134428 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 19) position: , mismatch: 7, identity: 0.767

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
agtccactgccaaaaccaaaagctaaaaaa	Protospacer
  *  *.************** *****.**

77. spacer 3.8|588766|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039606 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014868 plasmid p12-6919.3, complete sequence) position: , mismatch: 7, identity: 0.767

tttctcctgcacgtttatattttattttct	CRISPR spacer
ttggatgtgcacgtttatattatatttttt	Protospacer
**   . ************** ******.*

78. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 7, identity: 0.767

cttttatctcattatgatttatttttatct	CRISPR spacer
cttttatttcattatcatttattacatttt	Protospacer
*******.******* ******* .  *.*

79. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 7, identity: 0.767

cttttatctcattatgatttatttttatct	CRISPR spacer
cttttatttcattatcatttattacatttt	Protospacer
*******.******* ******* .  *.*

80. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 7, identity: 0.767

cttttatctcattatgatttatttttatct	CRISPR spacer
cttttatttcattatcatttattacatttt	Protospacer
*******.******* ******* .  *.*

81. spacer 3.12|589030|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448702 (Streptococcus phage Javan199, complete genome) position: , mismatch: 7, identity: 0.767

ctacttacacttacaaatggtctcgacgtg	CRISPR spacer
aaagtgacactttcaaatggtctcgtcgtt	Protospacer
  * * ****** ************ ***

82. spacer 3.22|589689|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MN098325 (Staphylococcus phage Portland, complete genome) position: , mismatch: 7, identity: 0.767

aaaagttcaataagtttatcgaatggtgga	CRISPR spacer
aactgttcaataagttaatcgaatggaatc	Protospacer
**  ************ ********* .

83. spacer 4.1|1673104|28|NZ_CP013688|CRISPRCasFinder matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 7, identity: 0.75

tttacaaatatataataacagattaaag	CRISPR spacer
gttacaaatatataataaaagaaaattc	Protospacer
 ***************** ***  *

84. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MN693414 (Marine virus AFVG_25M246, complete genome) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
cttgaaaagccaaaaccaaaatctaagccc	Protospacer
..****  ******************.

85. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MN693065 (Marine virus AFVG_25M245, complete genome) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
cttgaaaagccaaaaccaaaatctaagccc	Protospacer
..****  ******************.

86. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MN693386 (Marine virus AFVG_25M538, complete genome) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
cttgaaaagccaaaaccaaaatctaagccc	Protospacer
..****  ******************.

87. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MN693115 (Marine virus AFVG_25M537, complete genome) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
cttgaaaagccaaaaccaaaatctaagccc	Protospacer
..****  ******************.

88. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to MN693042 (Marine virus AFVG_25M244, complete genome) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
cttgaaaagccaaaaccaaaatctaagccc	Protospacer
..****  ******************.

89. spacer 3.6|588634|30|NZ_CP013688|CRISPRCasFinder,CRT matches to NZ_CP021437 (Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence) position: , mismatch: 8, identity: 0.733

tctgaattgccaaaaccaaaatctaaagaa	CRISPR spacer
tctgaattaccaaaaccaaaagcaagtctt	Protospacer
********.************ * *.

90. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
gttttatttcattatgttttatttattaaa	Protospacer
 ******.******** ******* *

91. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
ggattatctcattattatttattttatctt	Protospacer
   ************ *********  ..*

92. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214977 (Mycoplasma cynos strain NCTC10142 plasmid 4) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttgtctcattttgatttattttataaa	Protospacer
.****.******* ***********

93. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214977 (Mycoplasma cynos strain NCTC10142 plasmid 4) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttgtctcattttgatttattttataaa	Protospacer
.****.******* ***********

94. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
tttttgtctcattttgatttattttataaa	Protospacer
.****.******* ***********

95. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
gatgcttctaattatgttttatttttatcc	Protospacer
  * . *** ****** ************.

96. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
gatgcttctaattatgttttatttttatcc	Protospacer
  * . *** ****** ************.

97. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032657 (Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
gatgcttctaattatgttttatttttatcc	Protospacer
  * . *** ****** ************.

98. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MN693089 (Marine virus AFVG_25M562, complete genome) position: , mismatch: 8, identity: 0.733

cttttatctcattatgatttatttttatct	CRISPR spacer
attttatctaattctgatttatttactttg	Protospacer
 ******** *** ********** . *.

99. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MN038176 (Bacillus phage Phireball, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
agtatagaacgagagagtttattacaacgg	Protospacer
...*  ****************** **  *

100. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_031006 (Bacillus phage DIGNKC, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
agtatagaacgagagagtttattacaacgg	Protospacer
...*  ****************** **  *

101. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KX349902 (Bacillus phage Kida, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
agtatagaacgagagagtttattacaacgg	Protospacer
...*  ****************** **  *

102. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF288917 (Bacillus phage PPIsBest, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
agtatagaacgagagagtttattacaacgg	Protospacer
...*  ****************** **  *

103. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_007581 (Clostridium phage c-st, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
aaagccaaacgagaaagtttattagaagaa	Protospacer
.* . *.*******.************* .

104. spacer 3.14|589162|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to AP008983 (Clostridium phage c-st genomic DNA, complete genome) position: , mismatch: 8, identity: 0.733

gacaacgaacgagagagtttattagaagtg	CRISPR spacer
aaagccaaacgagaaagtttattagaagaa	Protospacer
.* . *.*******.************* .

105. spacer 3.15|589228|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032532 (Bacillus megaterium NCT-2 plasmid pNCT2_4, complete sequence) position: , mismatch: 8, identity: 0.733

ccgaaatccaaattgttgatagtccagata	CRISPR spacer
ttttaatccaaattgttcatagtcccgaat	Protospacer
..  ************* ******* **

106. spacer 3.15|589228|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 8, identity: 0.733

ccgaaatccaaattgttgatagtccagata	CRISPR spacer
ttttaatccaaattgtttatagtcctgagt	Protospacer
..  ************* ******* **

107. spacer 3.15|589228|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.733

ccgaaatccaaattgttgatagtccagata	CRISPR spacer
ttttaatccaaattgtttatagtcctgaat	Protospacer
..  ************* ******* **

108. spacer 3.15|589228|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.733

ccgaaatccaaattgttgatagtccagata	CRISPR spacer
ttttaatccaaattgtttatagtcctgaat	Protospacer
..  ************* ******* **

109. spacer 3.15|589228|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 8, identity: 0.733

ccgaaatccaaattgttgatagtccagata	CRISPR spacer
tagaaatcaaaattgttgatagtacttaac	Protospacer
. ****** ************** *  *

110. spacer 3.16|589294|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MG945380 (UNVERIFIED: Microviridae sp. isolate 8493-1612, partial genome) position: , mismatch: 8, identity: 0.733

ccagcagtctagaactcctttggattttat	CRISPR spacer
ttcagattctaaaaatcctttggattttat	Protospacer
.. . * ****.** ***************

111. spacer 3.17|589360|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021745 (Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence) position: , mismatch: 8, identity: 0.733

aaaatcaatcttctttttttatgcggtcgg	CRISPR spacer
ataatccatcttctttttttatgccccaac	Protospacer
* **** *****************  . .

112. spacer 3.17|589360|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MH590589 (Streptomyces phage SparkleGoddess, complete genome) position: , mismatch: 8, identity: 0.733

aaaatcaatcttctttttttatgcggtcgg	CRISPR spacer
gttatcaatcttcttattgtatgcggcctc	Protospacer
.  ************ ** *******.*

113. spacer 3.18|589426|29|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_016850 (Aliivibrio fischeri strain CG103 plasmid pCG103-32, complete sequence) position: , mismatch: 8, identity: 0.724

ctaaaccatctctggataattgcttttca	CRISPR spacer
ttgtcttttctttggataattgcttttca	Protospacer
.*.  .. ***.*****************

114. spacer 3.19|589491|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aatcaaacaaagctgatcatcaccagaacg	CRISPR spacer
accgcgccaaagctgatcagcgccagaacg	Protospacer
* .  . ************ *.********

115. spacer 3.20|589557|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_004953 (Corynebacterium jeikeium plasmid pCJ84, complete sequence) position: , mismatch: 8, identity: 0.733

atttgagtaatgaagttataggtttaacac	CRISPR spacer
attttagtaatgaagctataggttagtagg	Protospacer
**** **********.******** .  .

116. spacer 3.8|588766|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MF161328 (Streptococcus phage D4276, complete genome) position: , mismatch: 9, identity: 0.7

tttctcctgcacgtttatattttattttct	CRISPR spacer
gaatttgatcacgtttatatttcattttct	Protospacer
   .*.   *************.*******

117. spacer 3.10|588898|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 9, identity: 0.7

cttttatctcattatgatttatttttatct	CRISPR spacer
aaaatatctcattatcatttatttctagaa	Protospacer
    *********** ********.**

118. spacer 3.20|589557|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to NC_003490 (Corynebacterium jeikeium plasmid pB85766, complete sequence) position: , mismatch: 9, identity: 0.7

atttgagtaatgaagttataggtttaacac	CRISPR spacer
attttagtaatgaagctataggtcagtagg	Protospacer
**** **********.*******. .  .

119. spacer 3.21|589623|30|NZ_CP013688|CRISPRCasFinder,CRT,PILER-CR matches to MN693698 (Marine virus AFVG_250M751, complete genome) position: , mismatch: 9, identity: 0.7

tcataacagataagtcattagtatcatccg	CRISPR spacer
cagatccagataagtcattagtagcattag	Protospacer
. .   ***************** ***. *

120. spacer 3.5|588568|30|NZ_CP013688|CRISPRCasFinder,CRT matches to JQ340088 (Halocynthia phage JM-2012, complete genome) position: , mismatch: 10, identity: 0.667

gaaaaagggacgagataaagaacaattact	CRISPR spacer
tgtttcacaacgagataaagaacatttact	Protospacer
 .    . .*************** *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

54529 : 166558

105

Streptococcus_phage(30.77%)

tRNA,bacteriocin,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039671289.1\|54529_55672_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	4.5e-87	44.4
WP_014295417.1\|55809_56118_+	hypothetical protein	NA	NA	NA	NA
WP_014295416.1\|56121_56652_+	biotin transporter BioY	NA	NA	NA	NA
WP_014295415.1\|56711_57488_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014295414.1\|57487_57994_+	nucleoside deaminase	NA	NA	NA	NA
WP_014295413.1\|58196_58385_-	hypothetical protein	NA	NA	NA	NA
WP_058621333.1\|58432_59782_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_082306710.1\|59933_60428_+	hypothetical protein	NA	NA	NA	NA
WP_058621334.1\|60828_61197_+	hypothetical protein	NA	NA	NA	NA
WP_058621335.1\|61228_62182_+	hypothetical protein	NA	NA	NA	NA
WP_058622004.1\|62463_63162_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_039671283.1\|63416_64547_+	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_014295405.1\|64830_65358_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_014295404.1\|65354_66026_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_058621336.1\|66071_66986_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.3e-76	50.7
WP_058621337.1\|67045_68062_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_014295401.1\|68258_69026_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_014295400.1\|70300_70747_+	dUTP diphosphatase	Q332E8	Clostridium_botulinum_C_phage	3.3e-30	49.3
WP_039671282.1\|71327_72689_+	DNA repair protein RadA	NA	NA	NA	NA
WP_014295398.1\|72814_73309_+	carbonic anhydrase	NA	NA	NA	NA
WP_014295395.1\|74105_75056_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_058621338.1\|76768_78226_+\|tRNA	glutamate--tRNA ligase	A0A2K9L0I5	Tupanvirus	1.1e-10	24.8
WP_058621339.1\|78401_79568_+	MFS transporter	NA	NA	NA	NA
WP_044563147.1\|79791_80982_+	argininosuccinate synthase	NA	NA	NA	NA
WP_014295390.1\|81435_82830_+	argininosuccinate lyase	NA	NA	NA	NA
WP_014295389.1\|82958_83318_+	ribonuclease P protein component	NA	NA	NA	NA
WP_058621340.1\|83301_84117_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_058621341.1\|84129_85128_+	protein jag	NA	NA	NA	NA
WP_058621342.1\|86638_87049_+	hypothetical protein	NA	NA	NA	NA
WP_039671256.1\|87253_87388_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_014295342.1\|89104_90499_+	V-type ATP synthase subunit B	NA	NA	NA	NA
WP_058621343.1\|90532_91156_+	V-type ATP synthase subunit D	NA	NA	NA	NA
WP_014295340.1\|91273_91483_+	CsbD family protein	J7KJ36	Streptococcus_phage	2.3e-13	61.5
WP_039671255.1\|91553_91805_+	hypothetical protein	NA	NA	NA	NA
WP_082306712.1\|92056_92179_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_058621344.1\|92193_93732_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	5.2e-38	27.9
WP_058621345.1\|93728_94991_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	NA	NA	NA
WP_058621346.1\|95021_95261_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_058621347.1\|95253_96528_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_058621348.1\|96644_96827_+	hypothetical protein	NA	NA	NA	NA
WP_058621349.1\|96908_97790_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014295332.1\|97946_99569_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_014295331.1\|99590_100862_+	2-hydroxycarboxylate transporter family protein	NA	NA	NA	NA
WP_082306713.1\|101619_101994_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012962535.1\|102527_102785_+	hypothetical protein	NA	NA	NA	NA
WP_014295327.1\|102771_103365_+	signal peptidase I	NA	NA	NA	NA
WP_058621350.1\|103405_108424_+	cell wall ribonuclease G/E	NA	NA	NA	NA
WP_014295325.1\|108514_109951_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_058621351.1\|110094_111033_+	class C sortase	NA	NA	NA	NA
WP_058621352.1\|111650_113447_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.3e-76	32.5
WP_058621353.1\|114743_115514_+	TatD family hydrolase	NA	NA	NA	NA
WP_081498591.1\|115485_116076_+	ribonuclease M5	NA	NA	NA	NA
WP_058621354.1\|116072_116597_+	DUF1697 domain-containing protein	NA	NA	NA	NA
WP_058621355.1\|116666_117539_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_082306715.1\|121495_121717_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_058621356.1\|121768_121996_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_018364971.1\|122017_122401_+	hypothetical protein	NA	NA	NA	NA
WP_082306751.1\|122397_122619_+\|bacteriocin	garvicin Q family class II bacteriocin	NA	NA	NA	NA
WP_018364976.1\|122618_122927_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_058621357.1\|123728_123950_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_058621358.1\|123949_124246_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_058621359.1\|124414_124648_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_058621360.1\|124837_125080_+\|bacteriocin	garvicin Q family class II bacteriocin	NA	NA	NA	NA
WP_018364976.1\|125094_125403_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_058621361.1\|126053_126254_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_006531883.1\|126279_126462_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_058621362.1\|127080_127311_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_058621363.1\|127400_127712_+	hypothetical protein	NA	NA	NA	NA
WP_058621364.1\|127879_128518_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_082306717.1\|128676_128976_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_006531876.1\|128995_129184_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_058621365.1\|129932_130151_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_003066579.1\|130150_130447_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_099412448.1\|131475_133045_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_058621369.1\|133641_133842_+	hypothetical protein	NA	NA	NA	NA
WP_158526987.1\|133924_135495_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_058621371.1\|135729_136056_+	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_058621372.1\|136072_136804_+	response regulator transcription factor	A0A1V0E029	Clostridioides_phage	5.7e-19	25.0
WP_058621373.1\|136808_138119_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_058621374.1\|138577_138877_+	DUF3884 family protein	NA	NA	NA	NA
WP_039671232.1\|138886_139036_+	hypothetical protein	NA	NA	NA	NA
WP_039671231.1\|139047_139359_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_058621376.1\|139932_140247_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_014295297.1\|140376_140634_+	hypothetical protein	NA	NA	NA	NA
WP_014295296.1\|141075_141948_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_058621377.1\|141954_142614_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_058621378.1\|142610_143240_+	thiamine diphosphokinase	NA	NA	NA	NA
WP_014295293.1\|143241_144516_+	DNA recombination protein RmuC	NA	NA	NA	NA
WP_014295292.1\|144505_145444_+	HD domain-containing protein	NA	NA	NA	NA
WP_058621379.1\|145599_146412_+	pur operon repressor	A0A1X9I6E2	Streptococcus_phage	1.1e-07	29.6
WP_003066537.1\|146698_147112_+	30S ribosomal protein S12	NA	NA	NA	NA
WP_014295290.1\|147132_147603_+	30S ribosomal protein S7	NA	NA	NA	NA
WP_014295289.1\|147802_149881_+	elongation factor G	E4ZFJ7	Streptococcus_phage	6.7e-65	29.1
WP_014295288.1\|150086_151100_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_058621380.1\|151287_152484_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_014295286.1\|152713_153250_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_009854980.1\|153338_153710_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014295285.1\|153759_155106_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_014295284.1\|155283_159801_+	glutamate synthase large subunit	NA	NA	NA	NA
WP_014295283.1\|159802_161242_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_058621381.1\|162325_164008_-	ribonuclease J	NA	NA	NA	NA
WP_058621382.1\|164009_164240_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_014295280.1\|164424_165114_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014295279.1\|165097_165538_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_014295278.1\|165547_166558_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.8e-60	40.4

DBSCAN-SWA_2

367711 : 383275

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058621452.1\|367711_368476_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.3e-17	25.2
WP_014295091.1\|368475_369186_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-13	26.0
WP_039671140.1\|369356_370016_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	1.6e-73	64.2
WP_014295089.1\|370202_370838_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.0e-69	65.7
WP_014295088.1\|370848_371724_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.9e-74	50.7
WP_014295087.1\|371720_372521_+	signal peptidase II	NA	NA	NA	NA
WP_014295086.1\|372513_372834_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.9e-29	60.4
WP_014295085.1\|372840_373707_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.5e-114	70.8
WP_014295084.1\|374104_375340_+	ammonium transporter	NA	NA	NA	NA
WP_014295083.1\|375396_375738_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_014295082.1\|375868_376507_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_014295081.1\|376642_377734_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.9e-173	81.5
WP_014295080.1\|377804_378353_+	hypothetical protein	M1PSC3	Streptococcus_phage	2.2e-55	56.7
WP_014295079.1\|378398_379577_+	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	3.9e-179	81.1
WP_014295078.1\|379675_379903_+	hypothetical protein	NA	NA	NA	NA
WP_014295077.1\|379961_380447_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.6e-41	51.6
WP_014295076.1\|380459_380816_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.0e-34	58.3
WP_058621453.1\|382444_383275_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.6e-123	78.5

DBSCAN-SWA_3

430874 : 488461

Streptococcus_phage(36.84%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014295023.1\|430874_432821_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.9e-123	38.6
WP_014295020.1\|435130_436009_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_014295019.1\|436114_436807_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-31	35.7
WP_058621467.1\|436751_438284_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.2e-17	27.6
WP_014295016.1\|438525_438828_+	hypothetical protein	NA	NA	NA	NA
WP_014295015.1\|439075_439684_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	7.8e-22	33.2
WP_099412448.1\|439790_441361_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_014295014.1\|441462_442110_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_039671116.1\|442121_442826_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_058621468.1\|442842_443655_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_014295011.1\|443665_444430_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.7e-38	42.4
WP_014295010.1\|444734_445445_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.1e-38	38.1
WP_014295009.1\|445437_446790_+	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	1.9e-36	33.9
WP_014295008.1\|446790_447600_+	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	1.5e-36	39.1
WP_014295006.1\|448100_448787_+	ribonuclease III	M4QMG4	Micromonas_pusilla_virus	6.5e-25	34.7
WP_058621469.1\|448916_452456_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_058621470.1\|452472_452883_+	NUDIX hydrolase	A0A0A0YVI0	Citrobacter_phage	9.9e-05	35.4
WP_031365517.1\|452935_454192_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.3e-172	73.9
WP_058621471.1\|455757_456111_+	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_158527004.1\|456110_457316_+	chloride transporter	NA	NA	NA	NA
WP_058621473.1\|457302_458049_+	hypothetical protein	NA	NA	NA	NA
WP_058621474.1\|458066_459017_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_058621475.1\|459091_460348_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.3e-172	73.9
WP_058621476.1\|461493_462291_+	HAD family hydrolase	NA	NA	NA	NA
WP_058621477.1\|462290_463109_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_058621478.1\|463157_464570_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_081831482.1\|464576_464744_+	cytochrome O ubiquinol oxidase	NA	NA	NA	NA
WP_014294998.1\|465995_466808_-	TIGR03943 family protein	NA	NA	NA	NA
WP_014294997.1\|466807_467710_-	permease	NA	NA	NA	NA
WP_003065749.1\|467715_467850_-	hypothetical protein	NA	NA	NA	NA
WP_058621479.1\|468066_470199_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_058621480.1\|470185_470629_+	SprT family protein	NA	NA	NA	NA
WP_058621481.1\|470734_471013_+	PspC domain-containing protein	NA	NA	NA	NA
WP_058621482.1\|471348_472290_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_058621483.1\|472289_473072_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_058621484.1\|473095_473515_+	DUF948 domain-containing protein	NA	NA	NA	NA
WP_014294990.1\|473511_473985_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_058621485.1\|474154_474439_-	DUF3270 domain-containing protein	NA	NA	NA	NA
WP_014294988.1\|474707_475634_+	U32 family peptidase	NA	NA	NA	NA
WP_058621486.1\|475765_477055_+	U32 family peptidase	Q6DW11	Phage_TP	5.1e-39	30.5
WP_039671102.1\|477110_477434_-	hypothetical protein	NA	NA	NA	NA
WP_003065722.1\|478726_478939_+	hypothetical protein	A0A223LEC3	Bacillus_phage	6.6e-13	51.6
WP_058621487.1\|478984_479524_-	biotin transporter BioY	NA	NA	NA	NA
WP_058621488.1\|479916_480672_+	HAD family hydrolase	NA	NA	NA	NA
WP_006738512.1\|481951_482149_-	helix-turn-helix domain-containing protein	A0A1S5SF07	Streptococcus_phage	3.9e-07	43.1
WP_093529001.1\|482513_483193_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.2e-109	82.3
WP_003134158.1\|483253_483634_+	CHAP domain-containing protein	NA	NA	NA	NA
WP_058621489.1\|483686_484466_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_058621490.1\|484556_486461_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.5e-90	35.5
WP_058621491.1\|486461_486899_+	hypothetical protein	NA	NA	NA	NA
WP_058621492.1\|487780_488461_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.6e-121	94.2

DBSCAN-SWA_4

730575 : 743132

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039670892.1\|730575_731781_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.1e-42	48.0
WP_014294729.1\|731777_733649_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.6e-65	32.1
WP_014294728.1\|733726_735466_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.1e-42	27.1
WP_014294727.1\|735468_737235_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-60	31.3
WP_058621576.1\|737479_738139_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	3.5e-60	53.8
WP_014294725.1\|738131_738578_+	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	3.4e-43	57.7
WP_099390341.1\|738567_739284_+	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	6.3e-63	47.9
WP_014294723.1\|739296_739788_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.8e-46	61.6
WP_014294722.1\|739843_740341_-	membrane protein	NA	NA	NA	NA
WP_058621577.1\|740586_741939_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_058621578.1\|742215_742725_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014294719.1\|742721_743132_+	peptide deformylase	A0A2I7QLT9	Vibrio_phage	9.9e-13	39.0

DBSCAN-SWA_5

752740 : 762804

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058621584.1\|752740_753421_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-17	29.3
WP_058621585.1\|753429_754659_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.2e-09	25.3
WP_082306730.1\|755312_755912_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_058622014.1\|755916_758991_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.1e-12	21.1
WP_058621587.1\|758994_759858_+	KilA-N domain-containing protein	Q4ZC41	Staphylococcus_virus	2.5e-82	56.8
WP_058621588.1\|759850_761053_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	3.5e-18	24.9
WP_058621589.1\|761148_762804_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	9.6e-123	49.2

DBSCAN-SWA_6

783430 : 816564

Bacillus_virus(10.0%)

protease,integrase,transposase

attL 793700:793717|attR 814905:814922

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012962047.1\|783430_784660_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.9e-137	59.7
WP_058621607.1\|784670_785264_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_058621608.1\|785562_786939_+	amino acid permease	NA	NA	NA	NA
WP_014294682.1\|786951_787899_+	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_058621609.1\|789472_791581_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.2e-122	39.2
WP_014294677.1\|792765_793269_+	50S ribosomal protein L10	NA	NA	NA	NA
WP_014294676.1\|793348_793714_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
793700:793717	attL	NA	NA	NA	NA
WP_058621611.1\|793954_797563_+	N-6 DNA methylase	A0A1B1IUC6	uncultured_Mediterranean_phage	5.0e-07	23.8
WP_014294673.1\|798059_798320_+	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_058621612.1\|798309_799491_+\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	1.2e-26	29.3
WP_099412448.1\|799715_801286_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_014294671.1\|801504_801678_+	hypothetical protein	NA	NA	NA	NA
WP_014294668.1\|803033_803795_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.8e-21	31.2
WP_014294667.1\|803975_804926_+	ROK family glucokinase	NA	NA	NA	NA
WP_014294666.1\|805161_805587_+	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA
WP_014294665.1\|805620_806136_+	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA
WP_014294664.1\|806147_807080_+	tagatose-6-phosphate kinase	NA	NA	NA	NA
WP_007209213.1\|807082_808063_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA
WP_058621613.1\|808090_808408_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_058621614.1\|808407_810114_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_039670868.1\|810276_811683_+	6-phospho-beta-galactosidase	A0A0B5JD41	Pandoravirus	4.7e-46	28.8
WP_014294660.1\|811770_812667_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_014294659.1\|812914_813139_+	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	2.6e-07	39.3
WP_000860228.1\|813408_813657_+	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_014294658.1\|813659_814865_+\|integrase	site-specific integrase	A0A0S2GLI2	Bacillus_phage	4.5e-29	31.1
WP_058621615.1\|815388_816564_+\|transposase	IS256 family transposase	A0A0N9S006	Staphylococcus_phage	3.4e-05	28.2
814905:814922	attR	NA	NA	NA	NA

DBSCAN-SWA_7

953166 : 1020152

Streptococcus_phage(14.29%)

integrase,transposase

attL 952600:952623|attR 958246:958269

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
952600:952623	attL	NA	NA	NA	NA
WP_014294525.1\|953166_954102_+\|integrase	site-specific integrase	A8ATM2	Listeria_phage	6.4e-84	49.2
WP_058621654.1\|954146_957092_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.0e-18	22.7
WP_082306734.1\|957098_958316_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	4.5e-13	23.7
958246:958269	attR	NA	NA	NA	NA
WP_058621655.1\|958317_959913_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	8.6e-113	47.5
WP_058621656.1\|960445_961771_-	MATE family efflux transporter	NA	NA	NA	NA
WP_058621657.1\|963821_965111_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.2e-122	53.6
WP_058621659.1\|965616_967179_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	7.1e-19	30.3
WP_158526997.1\|967582_969153_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.0e-53	50.9
WP_058622019.1\|969233_969842_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	3.6e-35	41.6
WP_058621661.1\|970654_972109_+	alpha-amylase	NA	NA	NA	NA
WP_058621662.1\|972247_973984_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-56	30.6
WP_014294503.1\|973985_975710_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-44	26.6
WP_058621663.1\|975749_976352_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	2.6e-22	44.5
WP_058621664.1\|976351_977329_-	nucleoid-associated protein	NA	NA	NA	NA
WP_039670775.1\|977373_978624_-	serine hydroxymethyltransferase	A0A219YB23	Aeromonas_phage	8.6e-100	53.2
WP_039670774.1\|978727_979327_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.8e-18	31.1
WP_039670773.1\|979319_980150_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_014294497.1\|980149_981229_-	peptide chain release factor 1	NA	NA	NA	NA
WP_058622020.1\|981267_981849_-	thymidine kinase	A0A249XZX5	Enterococcus_phage	1.2e-48	53.2
WP_039670772.1\|982316_982526_+	hypothetical protein	Q7Y4M2	Streptococcus_phage	4.1e-23	75.4
WP_002885057.1\|982630_982816_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_058621665.1\|982963_983902_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_039670824.1\|983950_985231_-	purine permease	Q9KX94	Enterobacteria_phage	3.0e-31	28.4
WP_058621666.1\|985232_985814_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_058621667.1\|986761_987745_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	2.5e-139	74.6
WP_058621668.1\|990397_991816_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.5e-39	28.7
WP_048816338.1\|991938_992355_-	hypothetical protein	NA	NA	NA	NA
WP_142348653.1\|992385_992571_-	hypothetical protein	NA	NA	NA	NA
WP_099412448.1\|992691_994262_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_058621669.1\|994336_994765_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_082306736.1\|995902_996301_+	sodium transporter	NA	NA	NA	NA
WP_058621670.1\|996331_997087_-	SDR family oxidoreductase	F2NZ12	Diadromus_pulchellus_ascovirus	3.8e-10	28.6
WP_058621671.1\|997154_998153_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_058621672.1\|998169_999060_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_014294483.1\|999056_999893_-	NAD kinase	NA	NA	NA	NA
WP_058621673.1\|999867_1000533_-	GTP pyrophosphokinase family protein	F8K9M7	Nitrososphaera_phage	2.6e-10	32.6
WP_014294481.1\|1000665_1001235_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_058621674.1\|1001320_1002292_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	1.2e-40	36.0
WP_058621675.1\|1002299_1003427_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	7.9e-36	29.2
WP_014294478.1\|1003416_1003764_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_014294477.1\|1003909_1004557_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_014294476.1\|1004693_1005374_-	JAB domain-containing protein	A0A1B2LRS6	Wolbachia_phage	6.2e-12	34.9
WP_058621676.1\|1005420_1006260_-	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_058621677.1\|1006266_1007385_-	AI-2E family transporter	NA	NA	NA	NA
WP_058621678.1\|1008071_1008695_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	6.1e-30	40.9
WP_039670763.1\|1011294_1012623_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_058621679.1\|1012812_1013766_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.2e-39	36.6
WP_014294467.1\|1013881_1015099_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_014294466.1\|1015168_1016011_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014294465.1\|1016034_1016664_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-27	35.0
WP_009854101.1\|1016675_1017317_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_014294464.1\|1017502_1017832_-	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_014294462.1\|1018895_1020152_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.7e-170	73.4

DBSCAN-SWA_8

1259378 : 1354274

Streptococcus_phage(78.57%)

tail,terminase,holin,head,capsid,protease,tRNA,portal,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099412448.1\|1259378_1260948_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	2.6e-53	50.9
WP_058621768.1\|1261065_1261446_-	RidA family protein	NA	NA	NA	NA
WP_014294239.1\|1261517_1262312_-	YdcF family protein	NA	NA	NA	NA
WP_058621769.1\|1262350_1263274_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.8e-06	47.6
WP_014294237.1\|1264373_1265177_-	putative ABC transporter permease	NA	NA	NA	NA
WP_014294236.1\|1265262_1266438_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_014294235.1\|1266466_1267585_-	citrate synthase	NA	NA	NA	NA
WP_058621770.1\|1267588_1270252_-	aconitate hydratase AcnA	NA	NA	NA	NA
WP_014294233.1\|1270539_1270767_+	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	3.5e-12	42.9
WP_014294232.1\|1270844_1273004_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.7e-260	61.8
WP_014294231.1\|1273582_1274545_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.8e-126	69.8
WP_014294230.1\|1274813_1275380_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_058621771.1\|1275409_1275976_-	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_039670602.1\|1276131_1276689_-	NAD(P)H dehydrogenase	NA	NA	NA	NA
WP_014294227.1\|1276787_1277918_-	acetylornithine transaminase	B5LJF5	Mycobacterium_phage	3.8e-14	28.9
WP_014294226.1\|1277943_1278678_-	acetylglutamate kinase	NA	NA	NA	NA
WP_014294225.1\|1278691_1279885_-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	NA	NA	NA	NA
WP_058621772.1\|1279956_1280979_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_058621773.1\|1281091_1282270_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_058621774.1\|1282281_1283064_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_009853783.1\|1284651_1284840_-	hypothetical protein	NA	NA	NA	NA
WP_014294220.1\|1284885_1287504_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.0e-63	33.8
WP_039670593.1\|1287872_1288895_-	hypothetical protein	NA	NA	NA	NA
WP_014294218.1\|1288964_1289666_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	5.1e-09	28.3
WP_014294217.1\|1289719_1290331_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_058621775.1\|1290944_1292747_-	oligoendopeptidase F	NA	NA	NA	NA
WP_014294215.1\|1292736_1293708_-	competence protein CoiA	NA	NA	NA	NA
WP_039670589.1\|1293760_1294477_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_014294213.1\|1294552_1295257_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_058621776.1\|1296059_1297088_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_058621777.1\|1297119_1297845_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_014294210.1\|1297995_1298604_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.4e-62	57.4
WP_014294209.1\|1298692_1299754_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_158526998.1\|1300473_1301028_-	hypothetical protein	NA	NA	NA	NA
WP_058621779.1\|1301031_1301370_-	STAS-like domain-containing protein	NA	NA	NA	NA
WP_058621780.1\|1301387_1302242_-	hypothetical protein	NA	NA	NA	NA
WP_058621781.1\|1302319_1302547_-	hypothetical protein	Q6DMS5	Streptococcus_phage	5.5e-05	33.8
WP_058621782.1\|1302728_1304291_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.4e-219	73.2
WP_082306742.1\|1304290_1305526_-	recombinase family protein	M1NSJ1	Streptococcus_phage	3.2e-232	96.6
WP_058621784.1\|1305851_1307321_-	LysM peptidoglycan-binding domain-containing protein	A0A1B0RXL4	Streptococcus_phage	3.0e-261	92.6
WP_058621785.1\|1307322_1307727_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	1.5e-45	74.8
WP_058621786.1\|1307744_1309601_-	hypothetical protein	Q6DMS9	Streptococcus_phage	2.1e-256	73.1
WP_058621787.1\|1309613_1312529_-	carbamoylsarcosine amidase	Q6DMT0	Streptococcus_phage	0.0e+00	64.6
WP_058621788.1\|1312528_1313254_-	hypothetical protein	Q6DMT1	Streptococcus_phage	2.7e-82	57.5
WP_058621789.1\|1313250_1316109_-	hypothetical protein	A0A1B0RXL6	Streptococcus_phage	1.3e-215	94.5
WP_003054982.1\|1316291_1316711_-	hypothetical protein	D0R0E2	Streptococcus_phage	2.1e-71	100.0
WP_003054960.1\|1316722_1317292_-	hypothetical protein	E4ZFM9	Streptococcus_phage	2.2e-103	98.9
WP_003054958.1\|1317293_1317620_-	hypothetical protein	E4ZFM8	Streptococcus_phage	3.4e-56	99.1
WP_003054952.1\|1317626_1317995_-	hypothetical protein	A0A1X9I688	Streptococcus_phage	2.2e-48	91.0
WP_058621790.1\|1317987_1318326_-\|head,tail	head-tail adaptor protein	A0A1X9I694	Streptococcus_phage	4.9e-58	98.2
WP_003054946.1\|1318325_1318583_-\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	8.6e-39	97.6
WP_058621791.1\|1318585_1319791_-\|capsid	phage major capsid protein	A0A1X9I692	Streptococcus_phage	1.3e-225	98.0
WP_015057820.1\|1319809_1320505_-\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	6.2e-116	90.9
WP_058621792.1\|1320497_1321781_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	1.4e-222	88.3
WP_058621793.1\|1321861_1322488_-	hypothetical protein	NA	NA	NA	NA
WP_058621794.1\|1322525_1324118_-\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	1.0e-291	90.0
WP_058622028.1\|1324114_1324588_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	2.3e-82	94.3
WP_058621795.1\|1324650_1324860_-	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	1.3e-16	63.8
WP_058621796.1\|1324863_1325118_-	hypothetical protein	M1PG57	Streptococcus_phage	1.7e-18	58.2
WP_058621797.1\|1325189_1326446_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	2.3e-222	88.8
WP_058621798.1\|1326442_1327699_-	DNA modification methylase	A0A1B0RXE5	Streptococcus_phage	6.4e-212	86.6
WP_058621800.1\|1328414_1328780_-	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	6.0e-62	86.8
WP_058621801.1\|1329341_1330379_-	methionine adenosyltransferase	Q6DMV3	Streptococcus_phage	7.7e-179	91.3
WP_024409997.1\|1330425_1330608_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	6.5e-25	96.7
WP_024409998.1\|1330786_1331296_-	hypothetical protein	Q6DMV6	Streptococcus_phage	4.6e-44	52.7
WP_058621802.1\|1331288_1332665_-	DEAD/DEAH box helicase	A0A1B0RXH8	Streptococcus_phage	1.3e-258	97.6
WP_058621803.1\|1332645_1332927_-	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	4.6e-46	98.9
WP_058621804.1\|1333211_1335497_-	DNA primase	A0A1B0RXC5	Streptococcus_phage	0.0e+00	95.4
WP_058621805.1\|1335880_1336204_+	hypothetical protein	D0R0B4	Streptococcus_phage	9.1e-46	91.5
WP_058621806.1\|1336196_1337318_+	DUF2800 domain-containing protein	Q6DMW2	Streptococcus_phage	2.5e-207	94.6
WP_032462758.1\|1337322_1337871_+	DUF2815 family protein	E4ZFK3	Streptococcus_phage	7.1e-99	100.0
WP_058621807.1\|1338105_1340061_+	DNA polymerase	Q6DMW5	Streptococcus_phage	0.0e+00	97.5
WP_058621808.1\|1340099_1340669_-	hypothetical protein	Q6DMW6	Streptococcus_phage	9.6e-99	92.6
WP_058621809.1\|1341002_1342826_-	ImmA/IrrE family metallo-endopeptidase	A0A1B0RXB2	Streptococcus_phage	0.0e+00	96.7
WP_058621810.1\|1342943_1344083_-	DNA cytosine methyltransferase	R4TMW4	Halovirus	7.2e-29	31.3
WP_082306743.1\|1344172_1345225_+	HindVP family restriction endonuclease	NA	NA	NA	NA
WP_058621811.1\|1345316_1346006_+	helix-turn-helix transcriptional regulator	A0A1B0RXB1	Streptococcus_phage	1.5e-122	94.8
WP_058621812.1\|1346008_1346236_+	hypothetical protein	D0R0A4	Streptococcus_phage	1.1e-34	95.9
WP_058621813.1\|1347770_1348139_+	hypothetical protein	A0A1B0RXA8	Streptococcus_phage	2.6e-57	94.3
WP_058621814.1\|1348125_1348425_+	hypothetical protein	Q6DMX6	Streptococcus_phage	3.7e-49	98.0
WP_058621815.1\|1348616_1350080_-	Msr family ABC-F type ribosomal protection protein	A0A2I4R674	Erysipelothrix_phage	4.5e-249	96.9
WP_058621816.1\|1350200_1351418_-	macrolide efflux MFS transporter Mef(A)	A0A2K5B2B5	Erysipelothrix_phage	3.5e-215	99.0
WP_015057859.1\|1351966_1352383_-	hypothetical protein	A0A1B0RXA3	Streptococcus_phage	1.3e-73	100.0
WP_015057860.1\|1352397_1353510_-	recombinase family protein	Q6DMY0	Streptococcus_phage	5.0e-208	99.2
WP_058621817.1\|1353638_1354274_-	hypothetical protein	Q6DMY1	Streptococcus_phage	1.2e-110	93.4

DBSCAN-SWA_9

1992215 : 2000358

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014295497.1\|1992215_1993460_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	6.1e-90	42.2
WP_014295496.1\|1993460_1994750_+	insulinase family protein	A0A2K9LA15	Tupanvirus	6.1e-16	25.9
WP_014295495.1\|1994813_1995758_+	membrane protein	NA	NA	NA	NA
WP_058621992.1\|1995767_1996322_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_014295493.1\|1996318_1997161_+	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.2e-19	30.0
WP_014295492.1\|1997136_1997979_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	1.0e-16	28.4
WP_014295491.1\|1997971_1998769_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_058621993.1\|1998901_1999495_+	LysM peptidoglycan-binding domain-containing protein	A0A288TY55	Enterococcus_phage	2.2e-21	78.5
WP_014295489.1\|1999701_2000358_+	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	9.9e-23	70.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013688

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection