CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013737	Herbaspirillum rubrisubalbicans M1, complete genome	1 crisprs	cas3,DinG,DEDDh,csa3	0	2	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013737_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013737_1

3501279-3501408

Orphan

Consensus_repeat	Method
ATTGTCGAAGAAGCCGTAGCCCTGCTC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP013737_1

>merge|NZ_CP013737|1|3501279-3501408|PILER-CR
CGAAGAAGCCGTAGCCCTGCTCGCGCTCCTTGTCTTCGATGGCGGTGTGATTGTCGAAGAAACCGTAGCCCTGGGTGCGTTCGCGCTCTTCCTGGGTCACGAAATTGTCGAAGAAGCCGTAGCCGCGCTC

>NZ_CP013737|1|1|3501279-3501408|PILER-CR
CGAAGAAGCCGTAGCCCTGCTCGCGCT	CCTTGTCTTCGATGGCGGTGTGATTGT
CGAAGAAACCGTAGCCCTGGGTGCGTT	CGCGCTCTTCCTGGGTCACGAAATTGTCGA
AGAAGCCGTAGCCGCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013737.1\|WP_058896053.1\|3495025_3497737_+\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP013737.1\|WP_058896052.1\|3494333_3494879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013737.1\|WP_058896048.1\|3489984_3490350_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	unknown	unknown	gnl\|CDD\|239574
NZ_CP013737.1\|WP_058896057.1\|3502647_3503202_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013737.1\|WP_044529746.1\|3506226_3506841_-\|flagellar-transcriptional-regulator-FlhC	unknown	unknown	gnl\|CDD\|237181
NZ_CP013737.1\|WP_058896059.1\|3505343_3506138_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP013737.1\|WP_058896054.1\|3497914_3499162_+\|DUF2863-family-protein	unknown	unknown	gnl\|CDD\|371362
NZ_CP013737.1\|WP_058896061.1\|3508004_3509210_-\|cystathionine-beta-lyase	unknown	unknown	gnl\|CDD\|180810
NZ_CP013737.1\|WP_017451776.1\|3504324_3505185_-\|flagellar-motor-stator-protein-MotA	unknown	unknown	gnl\|CDD\|181655
NZ_CP013737.1\|WP_058896055.1\|3499398_3499905_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|182587
NZ_CP013737.1\|WP_058896047.1\|3488203_3489982_-\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|180814
NZ_CP013737.1\|WP_017451784.1\|3492181_3493171_+\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|235468
NZ_CP013737.1\|WP_058896060.1\|3507018_3507336_-\|flagellar-transcriptional-regulator-FlhD	unknown	unknown	gnl\|CDD\|179497
NZ_CP013737.1\|WP_058896058.1\|3503277_3504216_-\|flagellar-motor-protein-MotB	unknown	unknown	gnl\|CDD\|236365
NZ_CP013737.1\|WP_058896049.1\|3490352_3490763_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|274370
NZ_CP013737.1\|WP_058896062.1\|3509387_3509819_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013737.1\|WP_058896050.1\|3490929_3491715_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP013737.1\|WP_006463269.1\|3502153_3502519_-\|response-regulator	unknown	unknown	gnl\|CDD\|381110
NZ_CP013737.1\|WP_058896051.1\|3493303_3494305_+\|aldolase	unknown	unknown	gnl\|CDD\|225184
NZ_CP013737.1\|WP_058896063.1\|3509818_3511195_-\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838

Protein	Function_ID	Function_description	E-value
NZ_CP013737.1\|WP_058896053.1\|3495025_3497737_+\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP013737.1\|WP_058896048.1\|3489984_3490350_-\|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein	gnl\|CDD\|239574	cd03494, SQR_TypeC_SdhD, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. E. coli SQR, a member of this subfamily, reduces the high potential quinine, ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type C SQRs because they contain two transmembrane subunits and one heme group. SdhD and SdhC are the two transmembrane proteins of bacterial SQRs. They contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	8.81831e-36
NZ_CP013737.1\|WP_044529746.1\|3506226_3506841_-\|flagellar-transcriptional-regulator-FlhC	gnl\|CDD\|237181	PRK12722, PRK12722, flagellar transcriptional regulator FlhC.	5.6344e-129
NZ_CP013737.1\|WP_058896059.1\|3505343_3506138_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.80242e-07
NZ_CP013737.1\|WP_058896054.1\|3497914_3499162_+\|DUF2863-family-protein	gnl\|CDD\|371362	pfam11062, DUF2863, Protein of unknown function (DUF2863). This bacterial family of proteins have no known function.	0
NZ_CP013737.1\|WP_058896061.1\|3508004_3509210_-\|cystathionine-beta-lyase	gnl\|CDD\|180810	PRK07050, PRK07050, cystathionine beta-lyase; Provisional.	0
NZ_CP013737.1\|WP_017451776.1\|3504324_3505185_-\|flagellar-motor-stator-protein-MotA	gnl\|CDD\|181655	PRK09110, PRK09110, flagellar motor stator protein MotA.	0
NZ_CP013737.1\|WP_058896055.1\|3499398_3499905_-\|chemotaxis-protein-CheW	gnl\|CDD\|182587	PRK10612, PRK10612, chemotaxis protein CheW.	6.81781e-73
NZ_CP013737.1\|WP_058896047.1\|3488203_3489982_-\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|180814	PRK07057, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP013737.1\|WP_017451784.1\|3492181_3493171_+\|malate-dehydrogenase	gnl\|CDD\|235468	PRK05442, PRK05442, malate dehydrogenase; Provisional.	0
NZ_CP013737.1\|WP_058896060.1\|3507018_3507336_-\|flagellar-transcriptional-regulator-FlhD	gnl\|CDD\|179497	PRK02909, PRK02909, flagellar transcriptional regulator FlhD.	1.09322e-54
NZ_CP013737.1\|WP_058896058.1\|3503277_3504216_-\|flagellar-motor-protein-MotB	gnl\|CDD\|236365	PRK09041, motB, motility protein MotB.	0
NZ_CP013737.1\|WP_058896049.1\|3490352_3490763_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	gnl\|CDD\|274370	TIGR02970, Succinate_dehydrogenase_cytochrome_b556_subunit, succinate dehydrogenase, cytochrome b556 subunit. In E. coli and many other bacteria, two small, hydrophobic, mutually homologous subunits of succinate dehydrogenase, a TCA cycle enzyme, are SdhC and SdhD. This family is the SdhC, the cytochrome b subunit, called b556 in bacteria and b560 in mitochondria. SdhD (see TIGR02968) is called the hydrophobic membrane anchor subunit, although both SdhC and SdhD participate in anchoring the complex. In some bacteria, this cytochrome b subunit is replaced my a member of the cytochrome b558 family (see TIGR02046). [Energy metabolism, TCA cycle].	2.34238e-34
NZ_CP013737.1\|WP_058896050.1\|3490929_3491715_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	4.12831e-65
NZ_CP013737.1\|WP_006463269.1\|3502153_3502519_-\|response-regulator	gnl\|CDD\|381110	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY4 and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.64336e-68
NZ_CP013737.1\|WP_058896051.1\|3493303_3494305_+\|aldolase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	3.44655e-41
NZ_CP013737.1\|WP_058896063.1\|3509818_3511195_-\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0

>NZ_CP013737.1|WP_058896055.1|3499398_3499905_-|chemotaxis-protein-CheW
MSDTASKNLSGFGDKTDSNGNEFLAFTLGKEEYGIDILKVQEIRGYEAVTRIANSPDFIKGVVNLRGIIVPIVDMRIKFQLGEPTYDQFTVVIILNIGGRVVGMVVDSVSDVITLTQEQIKPAPEMGTTFDSDYLIGLGTLEQRMLILVDIDKLMSSAEMGLIEKLAA
>NZ_CP013737.1|WP_058896054.1|3497914_3499162_+|DUF2863-family-protein
MRRPAKRSSSKLSADSQHLVTFAQAIAQASSRLEERAWLKPLDALLNKLLRTGHQGLLDAALDHLFKADLDAYDVLIEAVEAGSESTTLEHDGQDYDVQLLVLPVLAWTRFAIASGPIAGDLLSAIGAHLHAHVLATDARLALAPALFSIEQLPRVHADVFALTRQMGQSALKNAPVQMRGEQPPTAAFLADTRYVIAAVAVPAGGALFHWQDSEQQSHFSANKAAAFEAWKQQATPLFTRLLPGCSVELLLPQAYFFGCREADKRIRPASIRAADYFLTQTLDIASSELHASIGGFSEDINGQIDEYRIGFSIGDDPTVVYGTVWPLYEQESGEELPMMIPAGAGLLEGLPPSPLQQILMVLRECGIVHIKHHAERFTMEFCDDCGAPLFPDREGELVHAEMPEDTPPPVEHFH
>NZ_CP013737.1|WP_058896053.1|3495025_3497737_+|aconitate-hydratase-AcnA
MSRNTLNTLKEFKISGSKKGKFYSLPALQKSLGVNISRLPVSIRIVLESVLRNCDGQKVTEEHVKQLANWGAKAARVDEIPFVVARVVLQDFTGVPLLADLAAMRNVASKLGKNPKNIEPLVPVDLVVDHSVQIDHFREKKALDLNMKLEFSRNNERYQFMKWGMQAFDTFGVVPPGFGIVHQVNLEYLARGVHNKTGVYYPDTLVGTDSHTTMINGIGVVGWGVGGIEAEAGMLGQPVYFLTPDVVGVNLTGALREGVTATDLVLTITELLRQTKVVGKFVEFFGEGTESLSLTDRATIANMAPEYGATMGFFPVDDATIAYFKGTGRTKAEIDAFEAYFKAQGLYGVPKAGQIDYTQEVSLDLGTVAPSLAGPKRPQDRIEIGNVKSTFSDLFTKPTAENGFNKKAEDLGASYKNADGVDVHNGDVLIAAITSCTNTSNPSVLLAAGLLAKKAVEAGLKVAPHIKTSLAPGSRVVTKYLEAAGLLPYLEKLGFGVTAYGCTTCIGNAGDLTPAMNEAIVKNDVVAAAVLSGNRNFEARIHPNIRANFLASPPLVVAYAIAGNVTRDLMTEPVGKGKGGKPVYLGDIWPTSQEIEKLLKFAMNAKTFKENYADVKGAPGKLWEAIKGVAKGEVYNWPSSTYIAEPPFFENFSEEPQAAATGISGARALGVFGDSITTDHISPAGSIKESSPAGKWLQANGVLKADFNSYGSRRGNHEIMMRGTFANVRIKNLMIPAKEDGSRVEGGITIHQPSGEEMSIYDAAMKYVAEGTPTMVFGGEEYGTGSSRDWAAKGTQLLGVKAVIARSFERIHRSNLVGMGVLPLQFLGNDSVQSLGITGEESFDLKGLEGEIKPQQEATLVIHRKNGQTQEVKLLLRIDTPIEVDYYKHGGILPFVLRQLLAA
>NZ_CP013737.1|WP_058896052.1|3494333_3494879_+|hypothetical-protein
MKKHLSLLALLGALFAVAGIAPAHADTDSTHTTKKKVVKKAHTKKAAAAAAAPAAKMPFSSDAEDDDSEPELSGTQSADFQCEMGNKLTIWKNDADDKHIAIRWNKRIHRLTRVATTTGANRFENHKMGLVWIGIPAKGLLLDSKKGQQLANECKNADQIKAAAAASAAPASTLAAAPHQN
>NZ_CP013737.1|WP_058896051.1|3493303_3494305_+|aldolase
MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPVFDITFDCEDGAAAGNEAAHAELVAALIASPDNVHRRIGARVHDVGHAHFEQDVATICGAAARELAYVMLPKPEGVEDVLRALESINRAARAAGRSYLPVQVLIETHGALADANKIAALPQVQSLSFGVMDFVSAHYGAIPGGAMRSPGQFDHPLVRRAKLEIAAVCHAHGKVPSHNVSTDIKNPAAVADDARRAAQEFGYTRMWSIHPDQIRPIVQAMSPATEEAELAAQILLKAQAVQWGPIQHLGNLHDRASYRYYWSILQRAHATGIALPPQTAAWFAPGDSPSTQP
>NZ_CP013737.1|WP_017451784.1|3492181_3493171_+|malate-dehydrogenase
MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEIDDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSAIEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGLEIDEFSQERINITLKELMEEREGVKHLVG
>NZ_CP013737.1|WP_058896050.1|3490929_3491715_-|GntR-family-transcriptional-regulator
MSSILPNSNNADAQAAGAGAASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSEEPQRPENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGAPIILEDIWLPGAIFKGLTAERLVEYRGPLYGLFESEFGTRMIRAEERIRAVGADQDAAEFLGVAPQTPLLSVERASFTYGDKPVEMRRGLYLTTNHHYQSELS
>NZ_CP013737.1|WP_058896049.1|3490352_3490763_-|succinate-dehydrogenase,-cytochrome-b556-subunit
MSEAAKPQRPQFRNIHLTQIAGYRMPLAAIVSIMHRISGLFLFLMLPFILFLLDSSLLSEGTFAYLKGLASGWFVKLVILALSWAYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVVSITLMVLVALKLFGAF
>NZ_CP013737.1|WP_058896048.1|3489984_3490350_-|succinate-dehydrogenase,-hydrophobic-membrane-anchor-protein
MADNNIGPKRLVVGAHYGLRDWMAQRATAVVMAIYTVILLVCFLTSTHFSYEGWAALFSRQWFKVATFAVFMALFFHAWIGVRDALMDYVKLVGLRLVLQVATIVWLIACAGYAAQILWRN
>NZ_CP013737.1|WP_058896047.1|3488203_3489982_-|succinate-dehydrogenase-flavoprotein-subunit
MAAIKSAITTRRFDAVIVGAGGSGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGASLGNMSEDNWYWHMFDTVKGSDYLGDQDAIEFMCREAPKAVYELEHFGMPFDRNPDGTIYQRPFGGHTANLGEKPVQRACAAADRTGHALLHTLYQRNVRAKTHFFVEWMALDLIRNEEGDVLGVVALEMETGEIMMLHAKTTLFATGGAGRIWAASTNAFINTGDGMGMAARAGLPLQDMEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPTLKDLAPRDFVSRSMDQEIKEGRGVGPHKDHVLLDLRHIGADTIKKRLPSILEIAHKFANVDATKEPIPVVPTIHYQMGGIPTNVHGQVVAPKGGSMKEVVQGMYAIGECACVSVHGANRLGTNSLLDLVVFGRAAGNHIVGTRLQDQSHKPIPAGALDRSLERIAHLESSTGSERVQDVANDIRATMQKYCGVFRTDALLQEGYKKIMELDERRKHVSFKDKSKVFNTARVEALELDNLIETAKATITSAAARKESRGAHAHSDYEQRDDVNWLKHTLWFSEGNRLDYKPVNMQPLTVETFKPKARTF
>NZ_CP013737.1|WP_006463269.1|3502153_3502519_-|response-regulator
MSKTILAVDDSGSLRQMVVFSLKAAGYNVTEAVDGVDALEKAKTHTFDLVLTDQNMPRMDGLTLIRSLRELTSYARVPILMLTTEFSDEMKAKGKAAGANGWLVKPFDPQRLTEVVRKVIG
>NZ_CP013737.1|WP_058896057.1|3502647_3503202_-|hypothetical-protein
MPTKTMLQELKRLLLDTASGGSRQLTEVESDLVQTNILLGEAIGKLGTSFMELHRSVQLQQSILEGLMNGNSQFDGESIEQLKATQGQVSHYVNAAVTGLQFQDMTSQLLERIVRRVIGLREALGVLSANSFEIVPEQGQTDEELKELLASTVQAMEERLTVLDSGLWKAVRQTRMESGDIELF
>NZ_CP013737.1|WP_058896058.1|3503277_3504216_-|flagellar-motor-protein-MotB
MADEGLRPIIVKRIKKGGGGHHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGDLNGIAEYFKTPLKVAMAGGSGSGDANTVLPGGGKDLTRQDGQLRKGENDIVSRKQSLKQAQQELERAERTRLEELKTRLEKAIDSNPTLKQFKNQLLIDITTEGLRIQIVDEKNRPMFALASAQLQPYTKEILHEIGRTLNDVPNKISLSGHTDATPYSQGEKGYSNWELSADRANASRRELIAGGMDESKVLRVVGLSSAVLLDKEDPFNPINRRISIIVMNKKAEEMVEKDSGSLNVPTDASDDDVQQGLGAPAKN
>NZ_CP013737.1|WP_017451776.1|3504324_3505185_-|flagellar-motor-stator-protein-MotA
MLVIIGYIVVMASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNGKAIKATLKALPTVFKGSAYTKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYLRLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMESVGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLNGYAPALSIEFGRKVLFSTERPTFLELEEHVKQAKSK
>NZ_CP013737.1|WP_058896059.1|3505343_3506138_-|class-I-SAM-dependent-methyltransferase
MSEDQNQAGARRRPLLQAPAIQALLLFVLGLVAANVIDVLLQRAGLSPLSPLQTSLLHGVLAALLARLRGMAVWWWLILLVFPVAALAVGSLHLPPWVFLVVFLFMLVLFWSTFRSQVPFYPSGQRAWDAVAALLPQDRAIRFMDIGSGLGGAVLDLSRRRPESEFTGIEIAPLPWLVSRLRAALAGNRCRFVRGDYLLLDFGDYDVVFAYLSPAAMVALWHKARAEMKPGTLLLSYEFHIPGTTPDVVIDAPGGGPVLHGWRM
>NZ_CP013737.1|WP_044529746.1|3506226_3506841_-|flagellar-transcriptional-regulator-FlhC
MAKKSVVTEAQEIQLAIELINLGARLQLLESETSLSRERLLKLYKELKGVSPPKGMLPFSTDWFITWQPNIHSSLFINIHRYLVEYARISGIEAVMKAYKLYLEQVGYTDSGEPVLSLTRAWTLVRFFESKMLMTTPCCKCGGHFVVHRLDLHQDYLCGLCHMPSRAGKTKKAKDAVVMGLVEAAMPLAVAAPLAEVPVLAAVA
>NZ_CP013737.1|WP_058896060.1|3507018_3507336_-|flagellar-transcriptional-regulator-FlhD
MNTNDMMAEIRDANLSYLMLAQQMIRSDKPTAIFRLGISAEIADLIEGLSNAQIMKLAATNMMLTRFRFDDSAILGMLTNYNKDKSLAQSHAAILMACQPSEQIS
>NZ_CP013737.1|WP_058896061.1|3508004_3509210_-|cystathionine-beta-lyase
MSDSNDFPAPSSASLPPLDPQTALIHSSYRAPEGFEAFPVGIHHASTVLFPNVAAMRSRDWREKLGYTYGLHGTPTSFVLEARLAEIEGGSHCRVTPSGLAAIAMVNFAFLKSGDDVLLPDNVYGPSKDLGQWLERDFQITARFYDPMIGAGLAELIQPNTRLIWTEAPGSVSMEVPDIPALCRAAHARGVLVAIDNTWAAGLAFKAFDHGVDIVMQAVTKYQSGGSDVLMGAVIVRDQALNEKLELAHMRLGFGVGMDDVYLVLRSLSSMRLRFQAHDAAARKVAAWLKQRPEIVAVLHPAFEDCPGHENWKRDFTGAGGLFSVIFDPRYGEQQTDRFVDSLRLFKIGYSWGGAHSLCVPYRMRGMRRQWQREGQLVRFNIGLESPEDLIADIEQALAQL
>NZ_CP013737.1|WP_058896062.1|3509387_3509819_-|hypothetical-protein
MAGPMMRRGLLAAALVLCTAVAWSPAQAASSGPAANAPPGSLQQTLMTHTLVLRGQIDGRDIQLSLAPKKNEDGLEGRYFFFGGSPEILVAGEVDGDDLIMEESINGKDVSGQWEGHRQGQSIVGTWSSADGAISKPFALQLP
>NZ_CP013737.1|WP_058896063.1|3509818_3511195_-|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MSNPSTPASPALPKVGFVSLGCPKALVDSEQILTQLRAEGYDTAKSYDGADLVIVNTCGFIDAAVQESLDAIGEALNENGKVIVTGCLGAKKDAEGEDIIQKIHPKVLEVTGPHAVGEVMQAVHKHLPKPHAPFIDLVPPQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPIADVMLEAENLFKAGVKELLVISQDTSAYGVDVKFRTGFWNGKPLKTHMTQLVGALGELAQQYGAWVRLHYVYPYPHVDQIIPLMAEGKILPYLDVPLQHAHPDVLKRMKRPANGEKNIERIQAWRAMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATANEIANPVPEEVREERRGRVMQLQEEISKKRLQAKVGKTLRVLIDEVDRNGGTGRTYSDAPEIDGVVYVKPPFEPHRKLEVGQFVDVRISAADAHDLWGAAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013737_1	1.1\|3501306\|27\|NZ_CP013737\|PILER-CR	3501306-3501332	27	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	480916-480942	3	0.889
NZ_CP013737_1	1.1\|3501306\|27\|NZ_CP013737\|PILER-CR	3501306-3501332	27	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	207571-207597	4	0.852
NZ_CP013737_1	1.1\|3501306\|27\|NZ_CP013737\|PILER-CR	3501306-3501332	27	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	615909-615935	4	0.852
NZ_CP013737_1	1.1\|3501306\|27\|NZ_CP013737\|PILER-CR	3501306-3501332	27	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	230221-230247	5	0.815
NZ_CP013737_1	1.1\|3501306\|27\|NZ_CP013737\|PILER-CR	3501306-3501332	27	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	391072-391098	6	0.778
NZ_CP013737_1	1.2\|3501360\|30\|NZ_CP013737\|PILER-CR	3501360-3501389	30	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	397869-397898	7	0.767
NZ_CP013737_1	1.2\|3501360\|30\|NZ_CP013737\|PILER-CR	3501360-3501389	30	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	539437-539466	7	0.767
NZ_CP013737_1	1.2\|3501360\|30\|NZ_CP013737\|PILER-CR	3501360-3501389	30	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	430548-430577	8	0.733
NZ_CP013737_1	1.2\|3501360\|30\|NZ_CP013737\|PILER-CR	3501360-3501389	30	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	302461-302490	8	0.733

1. spacer 1.1|3501306|27|NZ_CP013737|PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 3, identity: 0.889

gcgctccttgtcttcgatggcggtgtg	CRISPR spacer
gcgctcctcgtcgtcgatggcggtgtc	Protospacer
********.*** *************

2. spacer 1.1|3501306|27|NZ_CP013737|PILER-CR matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 4, identity: 0.852

gcgctccttgtcttcgatggcggtgtg	CRISPR spacer
ccgctcctcgtcgtcgatggcggtgtc	Protospacer
 *******.*** *************

3. spacer 1.1|3501306|27|NZ_CP013737|PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 4, identity: 0.852

gcgctccttgtcttcgatggcggtgtg	CRISPR spacer
ccgctcctcgtcgtcgatggcggtgtc	Protospacer
 *******.*** *************

4. spacer 1.1|3501306|27|NZ_CP013737|PILER-CR matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.815

gcgctccttgtcttcgatggcggtgtg	CRISPR spacer
ccgctcctcgtcgtcgatggcggtctc	Protospacer
 *******.*** *********** *

5. spacer 1.1|3501306|27|NZ_CP013737|PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 6, identity: 0.778

gcgctccttgtcttcgatggcggtgtg	CRISPR spacer
ctcgtcgttgtcttcgatggcgttgtg	Protospacer
 .  ** *************** ****

6. spacer 1.2|3501360|30|NZ_CP013737|PILER-CR matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgttcgcgctcttcctgggtcacgaa	CRISPR spacer
gatccccgcgcgctcttcctgcgtcacgac	Protospacer
*.* * . ************* *******

7. spacer 1.2|3501360|30|NZ_CP013737|PILER-CR matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgttcgcgctcttcctgggtcacgaa	CRISPR spacer
cgcgatctcgcgctcttcgtcggtcacgaa	Protospacer
 *.*  .*********** * *********

8. spacer 1.2|3501360|30|NZ_CP013737|PILER-CR matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgttcgcgctcttcctgggtcacgaa	CRISPR spacer
gaacgcttcgcgctcttcctgtgtcaggat	Protospacer
*.    *************** **** **

9. spacer 1.2|3501360|30|NZ_CP013737|PILER-CR matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgttcgcgctcttcctgggtcacgaa	CRISPR spacer
gatgcgttcgagctcttcctcggtccattg	Protospacer
*.******** ********* ****    .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1591356 : 1676517

Burkholderia_phage(28.21%)

transposase,plate,portal,integrase,head,capsid,tRNA,tail,terminase

attL 1641297:1641356|attR 1680042:1680119

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058894789.1\|1591356_1592130_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_008327243.1\|1592274_1592658_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_017454124.1\|1592762_1593434_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_058894790.1\|1593613_1594573_+	CobD/CbiB family protein	NA	NA	NA	NA
WP_058894791.1\|1594921_1595272_+	DUF3579 domain-containing protein	NA	NA	NA	NA
WP_058894792.1\|1595514_1596903_+	class II fumarate hydratase	NA	NA	NA	NA
WP_058894793.1\|1597222_1597549_+	hypothetical protein	NA	NA	NA	NA
WP_058894794.1\|1597619_1598183_+	glycine zipper family protein	NA	NA	NA	NA
WP_058894795.1\|1598442_1599471_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_058894796.1\|1599568_1600948_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_058894797.1\|1600944_1601691_-	response regulator	NA	NA	NA	NA
WP_058894798.1\|1601919_1602441_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_058894799.1\|1602747_1604289_+	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_058894800.1\|1604313_1607421_+	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_058894801.1\|1607433_1610670_+	MMPL family transporter	S5VTK5	Leptospira_phage	4.8e-62	22.1
WP_058894802.1\|1610692_1612222_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_058894803.1\|1612228_1614070_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	4.0e-45	34.7
WP_058894804.1\|1614243_1615647_+	MFS transporter	NA	NA	NA	NA
WP_058894805.1\|1615669_1616578_+	DMT family transporter	NA	NA	NA	NA
WP_017454378.1\|1616604_1617591_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_058894806.1\|1617938_1620056_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_058894807.1\|1620063_1621650_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_058894808.1\|1621640_1622615_+	ABC transporter permease	NA	NA	NA	NA
WP_058894809.1\|1622611_1623442_+	ABC transporter permease	NA	NA	NA	NA
WP_058894810.1\|1623438_1624890_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	2.7e-12	33.1
WP_058894811.1\|1624917_1625262_-	hypothetical protein	NA	NA	NA	NA
WP_058894812.1\|1625265_1626825_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.6e-16	32.9
WP_058894813.1\|1627021_1631044_-	DUF490 domain-containing protein	NA	NA	NA	NA
WP_058894814.1\|1631098_1632874_-	outer membrane protein assembly factor	NA	NA	NA	NA
WP_082685998.1\|1633206_1634016_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_017454389.1\|1634374_1635040_+	response regulator transcription factor	NA	NA	NA	NA
WP_058894815.1\|1635507_1636401_-	glutamate racemase	NA	NA	NA	NA
WP_058894816.1\|1636444_1637986_-	fumarate hydratase	NA	NA	NA	NA
WP_017454392.1\|1638018_1638639_-	YqhA family protein	K4K6D8	Caulobacter_phage	2.0e-17	31.5
WP_058894817.1\|1639065_1641048_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	7.2e-85	39.7
1641297:1641356	attL	NA	NA	NA	NA
WP_058894818.1\|1641485_1642640_-\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	5.3e-120	57.4
WP_058894819.1\|1642862_1643228_-	hypothetical protein	NA	NA	NA	NA
WP_058894820.1\|1643367_1645419_-	replication endonuclease	A4JWW0	Burkholderia_virus	8.2e-108	41.5
WP_058894821.1\|1645408_1645762_-	hypothetical protein	NA	NA	NA	NA
WP_058894822.1\|1645850_1646057_-	hypothetical protein	NA	NA	NA	NA
WP_082685999.1\|1646136_1646397_-	ogr/Delta-like zinc finger family protein	E5E3T8	Burkholderia_phage	8.2e-13	50.0
WP_058894823.1\|1646387_1646585_-	hypothetical protein	A4PE59	Ralstonia_virus	1.1e-06	47.2
WP_058894824.1\|1646622_1646820_-	hypothetical protein	E5E3U0	Burkholderia_phage	3.4e-11	54.7
WP_156425813.1\|1646838_1647039_-	hypothetical protein	NA	NA	NA	NA
WP_058894826.1\|1647122_1647548_+	helix-turn-helix transcriptional regulator	K4NXA8	Burkholderia_phage	2.7e-21	53.5
WP_156425814.1\|1647662_1648328_+	DUF1496 domain-containing protein	A4PE55	Ralstonia_virus	2.2e-14	27.3
WP_082686000.1\|1648386_1650330_+	hypothetical protein	NA	NA	NA	NA
WP_058894829.1\|1650337_1651567_-	late control protein	K4PAY4	Burkholderia_phage	1.7e-84	49.4
WP_058894830.1\|1651563_1652211_-\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	2.2e-38	59.1
WP_058894831.1\|1652222_1654847_-	hypothetical protein	A4PE52	Ralstonia_virus	2.4e-221	54.4
WP_006464173.1\|1654847_1654961_-\|tail	GpE family phage tail protein	A0A089FGX3	Burkholderia_phage	5.4e-06	67.6
WP_058894832.1\|1654969_1655287_-\|tail	phage tail assembly protein	A4PE51	Ralstonia_virus	3.5e-18	52.7
WP_058894833.1\|1655346_1655856_-\|tail	phage major tail tube protein	R4JEU1	Burkholderia_phage	4.2e-45	54.4
WP_058894834.1\|1655913_1657092_-\|tail	phage tail sheath protein	E5FFG9	Burkholderia_phage	1.8e-147	67.3
WP_082686143.1\|1657116_1657299_-\|tail	phage tail protein	NA	NA	NA	NA
WP_058897507.1\|1657403_1658003_-	hypothetical protein	NA	NA	NA	NA
WP_058894836.1\|1658608_1659208_-\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	4.3e-57	58.4
WP_058894837.1\|1659221_1660145_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	3.3e-72	51.2
WP_034309811.1\|1660141_1660486_-	oxidoreductase	E5FFH4	Burkholderia_phage	7.0e-20	47.9
WP_058894838.1\|1660482_1661127_-\|plate	phage baseplate assembly protein V	A0A2H4JFJ8	uncultured_Caudovirales_phage	1.3e-30	40.0
WP_058894839.1\|1661225_1661762_-	hypothetical protein	NA	NA	NA	NA
WP_058894840.1\|1661852_1662323_-	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	1.5e-36	54.6
WP_058894841.1\|1662319_1662805_-\|tail	phage tail protein	A0A2H4J906	uncultured_Caudovirales_phage	6.0e-33	51.0
WP_058894842.1\|1662758_1663328_-	lysozyme	NA	NA	NA	NA
WP_058894843.1\|1663324_1663855_-	glycoside hydrolase family 104 protein	Q9MC90	Pseudomonas_phage	1.3e-41	62.3
WP_058894844.1\|1663851_1664226_-	hypothetical protein	NA	NA	NA	NA
WP_017452849.1\|1664266_1664476_-\|tail	tail protein X	E5FFI3	Burkholderia_phage	7.8e-06	47.8
WP_058894845.1\|1664475_1664967_-\|head	head completion/stabilization protein	A4JWU5	Burkholderia_virus	4.3e-31	53.5
WP_058894846.1\|1665055_1665775_-\|integrase	integrase	A0A2H4J948	uncultured_Caudovirales_phage	1.1e-43	45.1
WP_017452846.1\|1665774_1666818_-\|capsid	phage major capsid protein, P2 family	A4PE30	Ralstonia_virus	2.5e-113	63.4
WP_058894847.1\|1666869_1667712_-\|capsid	GPO family capsid scaffolding protein	E5FFI7	Burkholderia_phage	1.0e-56	48.6
WP_044527945.1\|1667855_1669637_+\|terminase	terminase ATPase subunit family protein	A4JWQ1	Burkholderia_virus	1.6e-229	65.8
WP_058894848.1\|1669636_1670689_+\|portal	phage portal protein	K4NZV0	Burkholderia_phage	1.5e-121	61.6
WP_058894849.1\|1670918_1671644_-	hypothetical protein	A4PE26	Ralstonia_virus	4.0e-41	45.9
WP_058894850.1\|1671640_1672243_-	hypothetical protein	A4PE25	Ralstonia_virus	3.8e-37	46.2
WP_058894851.1\|1672242_1672590_-	hypothetical protein	NA	NA	NA	NA
WP_058894852.1\|1672573_1673083_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	1.2e-44	56.7
WP_058894853.1\|1673079_1673496_-	PAAR domain-containing protein	A4PE23	Ralstonia_virus	6.9e-22	44.7
WP_082686002.1\|1674106_1675267_+	AAA family ATPase	NA	NA	NA	NA
WP_123020395.1\|1675286_1676517_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	7.3e-128	79.1
1680042:1680119	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2662814 : 2703383

Burkholderia_virus(40.0%)

plate,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156425905.1\|2662814_2663024_-\|transposase	transposase	NA	NA	NA	NA
WP_123020395.1\|2663059_2664290_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	7.3e-128	79.1
WP_156425828.1\|2664642_2665431_+	hypothetical protein	NA	NA	NA	NA
WP_123020447.1\|2665606_2666044_-	hypothetical protein	NA	NA	NA	NA
WP_156425829.1\|2666538_2666691_+	hypothetical protein	NA	NA	NA	NA
WP_156425830.1\|2666796_2666946_-	hypothetical protein	NA	NA	NA	NA
WP_082686038.1\|2666942_2667344_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_058895475.1\|2667893_2668226_+	thioredoxin	A0A1V0SD63	Indivirus	1.8e-09	50.0
WP_058895476.1\|2668229_2669129_+	hypothetical protein	NA	NA	NA	NA
WP_082686039.1\|2669170_2670646_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_082686040.1\|2670819_2671767_-	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_082686149.1\|2671770_2672292_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_058895478.1\|2672803_2673268_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_058897558.1\|2673730_2676064_+	TonB-dependent receptor	NA	NA	NA	NA
WP_058897559.1\|2676593_2676860_+	TonB family protein	NA	NA	NA	NA
WP_058895479.1\|2676914_2677646_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_082686151.1\|2677662_2678076_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_058895481.1\|2678072_2679857_+	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_082686042.1\|2679853_2681227_+	hypothetical protein	NA	NA	NA	NA
WP_058897560.1\|2681322_2682765_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_156425831.1\|2683567_2684293_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_082686044.1\|2684253_2684835_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_058895484.1\|2684917_2685460_-	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	4.8e-31	43.6
WP_058895485.1\|2685657_2686059_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_058895486.1\|2686120_2686432_+	hypothetical protein	NA	NA	NA	NA
WP_058895487.1\|2686483_2686759_+	hypothetical protein	NA	NA	NA	NA
WP_058895488.1\|2686774_2687284_+	hypothetical protein	NA	NA	NA	NA
WP_044530237.1\|2688029_2688374_+	hypothetical protein	NA	NA	NA	NA
WP_058895489.1\|2688404_2688668_+	DUF1640 domain-containing protein	Q2A091	Sodalis_phage	3.7e-05	34.4
WP_058895490.1\|2688881_2689358_-	hypothetical protein	NA	NA	NA	NA
WP_156425832.1\|2689354_2689657_-	hypothetical protein	NA	NA	NA	NA
WP_123020395.1\|2689826_2691058_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	7.3e-128	79.1
WP_058895492.1\|2691415_2692315_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058895493.1\|2692476_2693280_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_058895494.1\|2693297_2694119_-	TrmB family transcriptional regulator	NA	NA	NA	NA
WP_058895495.1\|2694234_2694600_+	RidA family protein	NA	NA	NA	NA
WP_058895496.1\|2694596_2695802_+	MFS transporter	NA	NA	NA	NA
WP_123020500.1\|2697869_2699366_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_058895498.1\|2699434_2700007_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_058895499.1\|2700059_2700443_+	hypothetical protein	NA	NA	NA	NA
WP_058895500.1\|2700507_2702334_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_058895501.1\|2702297_2703383_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_3

3465172 : 3476905

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058896032.1\|3465172_3465598_-	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	3.5e-21	41.4
WP_058896033.1\|3465867_3466557_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	4.8e-28	36.8
WP_058896035.1\|3468225_3469587_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	2.6e-25	26.3
WP_058896036.1\|3469728_3470742_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	4.6e-35	33.9
WP_058896037.1\|3470745_3471711_-	peptidoglycan DD-metalloendopeptidase family protein	A0A1P8CWQ1	Bacillus_phage	4.1e-09	42.4
WP_058896038.1\|3471952_3472918_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.7e-34	48.4
WP_058896039.1\|3472914_3473652_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.1e-73	56.2
WP_058896040.1\|3473724_3474672_-	flagellar brake protein	NA	NA	NA	NA
WP_058896041.1\|3474673_3476905_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	3.1e-84	31.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage