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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LN879502 Candidatus Protochlamydia naegleriophila strain KNic chromosome cPNK 5 crisprs DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2 1 8 2 0
NZ_LN879503 Candidatus Protochlamydia naegleriophila strain KNic plasmid pPNK, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_LN879502
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LN879502_1 1212614-1212714 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LN879502_2 1359454-1359970 TypeI-E NA
8 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LN879502_3 1518904-1519040 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LN879502_4 1521144-1521225 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LN879502_5 1722264-1722563 Orphan NA
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LN879502_3 3.1|1518936|73|NZ_LN879502|CRISPRCasFinder 1518936-1519008 73 NZ_LN879503.1 110815-110887 14 0.808

1. spacer 3.1|1518936|73|NZ_LN879502|CRISPRCasFinder matches to position: 110815-110887, mismatch: 14, identity: 0.808

ggcttgtgcgttttctaattcatccatctctctacgacgctcagtttgctctatacgaat	CRISPR spacer
ggcttgtgcgttttctaattcacccatctctctacgacgctcagtttgctctatacgaat	Protospacer
**********************.*************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LN879502_5 5.4|1722510|21|NZ_LN879502|CRISPRCasFinder 1722510-1722530 21 MT586120 Synechococcus phage S-CAM7 isolate 0809CC03, complete genome 15725-15745 1 0.952
NZ_LN879502_5 5.4|1722510|21|NZ_LN879502|CRISPRCasFinder 1722510-1722530 21 KU686213 Synechococcus phage S-CAM7 isolate 0910SB42, complete genome 16886-16906 1 0.952
NZ_LN879502_4 4.1|1521172|26|NZ_LN879502|CRISPRCasFinder 1521172-1521197 26 MH133207 Acinetobacter phage vB_AbaM_B9, complete genome 40697-40722 4 0.846
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP010111 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence 209077-209108 6 0.812
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 CP042948 Escherichia coli strain 90-9133 plasmid p90-9133_1, complete sequence 104138-104169 6 0.812
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NC_010862 Escherichia coli plasmid pMAR7, complete sequence 6671-6702 6 0.812
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NC_011603 Escherichia coli O127:H6 str. E2348/69 plasmid pMAR2, complete sequence 6671-6702 6 0.812
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NZ_AP014804 Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence 6705-6736 6 0.812
NZ_LN879502_2 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder 1359665-1359697 33 NZ_CP010111 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence 209076-209108 7 0.788
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP009636 Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence 85699-85730 7 0.781
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP053962 Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence 150075-150106 7 0.781
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NC_019765 Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence 30491-30522 7 0.781
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NC_019401 Cronobacter phage vB_CsaM_GAP32, complete genome 147372-147403 7 0.781
NZ_LN879502_5 5.2|1722393|30|NZ_LN879502|CRISPRCasFinder 1722393-1722422 30 NZ_CP043508 Acetobacter sp. KACC 21233 plasmid unnamed2, complete sequence 65214-65243 7 0.767
NZ_LN879502_2 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder 1359665-1359697 33 NZ_CP009636 Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence 85698-85730 8 0.758
NZ_LN879502_2 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder 1359665-1359697 33 NZ_CP053962 Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence 150074-150106 8 0.758
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 764955-764986 8 0.75
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 AP013581 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, *** SEQUENCING IN PROGRESS *** 20753-20784 8 0.75
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 KP399677 Listeria phage vB_LmoS_188, complete genome 25921-25952 8 0.75
NZ_LN879502_2 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder 1359665-1359697 33 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 217719-217751 9 0.727
NZ_LN879502_2 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder 1359665-1359697 33 NZ_AP019824 Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence 27409-27441 9 0.727
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 217720-217751 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_AP019824 Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence 27410-27441 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP039918 Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626a, complete sequence 320617-320648 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP024774 Bacillus thuringiensis LM1212 plasmid pLM3, complete sequence 37064-37095 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP008817 Ochrobactrum anthropi strain OAB plasmid 1, complete sequence 122272-122303 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP041074 Bacillus tropicus strain LM1212-W3 plasmid p1, complete sequence 32654-32685 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP015253 Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence 106328-106359 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 MK448844 Streptococcus phage Javan116, complete genome 6180-6211 9 0.719
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NC_004604 Bacillus megaterium QM B1551 plasmid pBM400, complete sequence 5808-5839 9 0.719
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 NZ_CP032535 Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence 23061-23092 9 0.719
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 MK493321 Cyanophage S-RIM4 isolate RW_11_0999, complete genome 78357-78388 9 0.719
NZ_LN879502_2 2.16|1359910|32|NZ_LN879502|CRT 1359910-1359941 32 JN371769 Synechococcus phage metaG-MbCM1, complete genome 144283-144314 9 0.719
NZ_LN879502_2 2.12|1359666|32|NZ_LN879502|CRT 1359666-1359697 32 NZ_CP013123 Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed2, complete sequence 83-114 10 0.688
NZ_LN879502_2 2.14|1359788|32|NZ_LN879502|CRT 1359788-1359819 32 MN180248 UNVERIFIED: Wolbachia phage WO isolate Seq1WORi_AMD1 genomic sequence 22291-22322 11 0.656
NZ_LN879502_3 3.1|1518936|73|NZ_LN879502|CRISPRCasFinder 1518936-1519008 73 NZ_LN879503 Candidatus Protochlamydia naegleriophila strain KNic plasmid pPNK, complete sequence 110815-110887 14 0.808

1. spacer 5.4|1722510|21|NZ_LN879502|CRISPRCasFinder matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 1, identity: 0.952

tacgccagtagcaccagtcga	CRISPR spacer
tacgccagtagcaccagtgga	Protospacer
****************** **

2. spacer 5.4|1722510|21|NZ_LN879502|CRISPRCasFinder matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 1, identity: 0.952

tacgccagtagcaccagtcga	CRISPR spacer
tacgccagtagcaccagtgga	Protospacer
****************** **

3. spacer 4.1|1521172|26|NZ_LN879502|CRISPRCasFinder matches to MH133207 (Acinetobacter phage vB_AbaM_B9, complete genome) position: , mismatch: 4, identity: 0.846

gaatcgattcttggtgtcgattttct	CRISPR spacer
ggaaagattcttggtgttgattttct	Protospacer
*.*  ************.********

4. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 6, identity: 0.812

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
aaatttcaatttcttttgctaattcacgtata	Protospacer
*  ******.*******************.. 

5. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to CP042948 (Escherichia coli strain 90-9133 plasmid p90-9133_1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgatttagaaaagtatattgat--actgctaat	CRISPR spacer
ttgatttagaaaagtataaagatgaattgctt--	Protospacer
******************  ***  *.****   

6. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NC_010862 (Escherichia coli plasmid pMAR7, complete sequence) position: , mismatch: 6, identity: 0.812

ttgatttagaaaagtatattgat--actgctaat	CRISPR spacer
ttgatttagaaaagtataaagatgaattgctt--	Protospacer
******************  ***  *.****   

7. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NC_011603 (Escherichia coli O127:H6 str. E2348/69 plasmid pMAR2, complete sequence) position: , mismatch: 6, identity: 0.812

ttgatttagaaaagtatattgat--actgctaat	CRISPR spacer
ttgatttagaaaagtataaagatgaattgctt--	Protospacer
******************  ***  *.****   

8. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NZ_AP014804 (Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgatttagaaaagtatattgat--actgctaat	CRISPR spacer
ttgatttagaaaagtataaagatgaattgctt--	Protospacer
******************  ***  *.****   

9. spacer 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 7, identity: 0.788

tatttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gaaatttcaatttcttttgctaattcacgtata	Protospacer
 *  ******.*******************.. 

10. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP009636 (Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence) position: , mismatch: 7, identity: 0.781

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
aaatatcaatttcttttgctaattcacgtata	Protospacer
*  * ****.*******************.. 

11. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP053962 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
aaatatcaatttcttttgctaattcacgtata	Protospacer
*  * ****.*******************.. 

12. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 7, identity: 0.781

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
atttttcaaattcttttgctaatgaaactgaa	Protospacer
********* *************  *  **  

13. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 7, identity: 0.781

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
ttgatttagaaaactatactgatgcaattact	Protospacer
************* ****.****.* ..** *

14. spacer 5.2|1722393|30|NZ_LN879502|CRISPRCasFinder matches to NZ_CP043508 (Acetobacter sp. KACC 21233 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tggccct-----accgatcccgtcgctccagttac	CRISPR spacer
-----ctcgatgaccgatcccgttgctccagtaac	Protospacer
     **     ***********.******** **

15. spacer 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder matches to NZ_CP009636 (Bacillus cereus 03BB108 plasmid pBFI_2, complete sequence) position: , mismatch: 8, identity: 0.758

tatttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gaaatatcaatttcttttgctaattcacgtata	Protospacer
 *  * ****.*******************.. 

16. spacer 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder matches to NZ_CP053962 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

tatttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gaaatatcaatttcttttgctaattcacgtata	Protospacer
 *  * ****.*******************.. 

17. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.75

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ttttttcaacatcttttactaattgagctaca	Protospacer
 ********* ******.****** *  *.* 

18. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to AP013581 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C23-MedDCM-OCT-S23-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
atggtaatcaaaaaaatattgatactgctaat	Protospacer
 **.*    ****. *****************

19. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 8, identity: 0.75

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
gccatttagaacattatattgatactacagat	Protospacer
 . ******** * ************.* .**

20. spacer 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.727

tatttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
tttttttcaacttcttctgttaattcattatat	Protospacer
* **************.**.*******.    .

21. spacer 2.4|1359665|33|NZ_LN879502|PILER-CR,CRISPRCasFinder matches to NZ_AP019824 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence) position: , mismatch: 9, identity: 0.727

tatttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
tgtttttcaacttcttttcttaattcttcttgt	Protospacer
*.**************** .****** . *  .

22. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ttttttcaacttcttctgttaattcattatat	Protospacer
 **************.**.*******.    .

23. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_AP019824 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gtttttcaacttcttttcttaattcttcttgt	Protospacer
.**************** .****** . *  .

24. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP039918 (Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626a, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gacattggtcttcctttgctaattcaagtgcc	Protospacer
. . ** . ****.************ *****

25. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP024774 (Bacillus thuringiensis LM1212 plasmid pLM3, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ctttttcaacttcttttgccattttaggaatt	Protospacer
 ******************.* **.* * ...

26. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP008817 (Ochrobactrum anthropi strain OAB plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
gacattggtcttcctttgctaattcaagtgcc	Protospacer
. . ** . ****.************ *****

27. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP041074 (Bacillus tropicus strain LM1212-W3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ctttttcaacttcttttgccattttaggaatt	Protospacer
 ******************.* **.* * ...

28. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP015253 (Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ctttttcaacttcttttgccattttaggaatt	Protospacer
 ******************.* **.* * ...

29. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to MK448844 (Streptococcus phage Javan116, complete genome) position: , mismatch: 9, identity: 0.719

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ccattccaacttcttttgcaaattcaattaac	Protospacer
 . **.************* ******  *. *

30. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NC_004604 (Bacillus megaterium QM B1551 plasmid pBM400, complete sequence) position: , mismatch: 9, identity: 0.719

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
gtgatttagataattatattgataatttagaa	Protospacer
 ********* ** ********** * . .* 

31. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to NZ_CP032535 (Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence) position: , mismatch: 9, identity: 0.719

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
gtgatttagataattatattgataatttagaa	Protospacer
 ********* ** ********** * . .* 

32. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to MK493321 (Cyanophage S-RIM4 isolate RW_11_0999, complete genome) position: , mismatch: 9, identity: 0.719

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
ctgatttagaagaatatattgatatggtacgt	Protospacer
.**********.*.**********. *.  .*

33. spacer 2.16|1359910|32|NZ_LN879502|CRT matches to JN371769 (Synechococcus phage metaG-MbCM1, complete genome) position: , mismatch: 9, identity: 0.719

ttgatttagaaaagtatattgatactgctaat	CRISPR spacer
atgatttagaagagtacattgataacttagat	Protospacer
 **********.****.******* . . .**

34. spacer 2.12|1359666|32|NZ_LN879502|CRT matches to NZ_CP013123 (Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

atttttcaacttcttttgctaattcacgtgcc	CRISPR spacer
ttttttcaatttctttttctaatttttttaaa	Protospacer
 ********.******* ******. . *.  

35. spacer 2.14|1359788|32|NZ_LN879502|CRT matches to MN180248 (UNVERIFIED: Wolbachia phage WO isolate Seq1WORi_AMD1 genomic sequence) position: , mismatch: 11, identity: 0.656

acacaaagagacttatgacttgattttaaggt	CRISPR spacer
gatgaaagagacttatgtcttgatattctcaa	Protospacer
.   ************* ****** **   . 

36. spacer 3.1|1518936|73|NZ_LN879502|CRISPRCasFinder matches to NZ_LN879503 (Candidatus Protochlamydia naegleriophila strain KNic plasmid pPNK, complete sequence) position: , mismatch: 14, identity: 0.808

ggcttgtgcgttttctaattcatccatctctctacgacgctcagtttgctctatacgaat	CRISPR spacer
ggcttgtgcgttttctaattcacccatctctctacgacgctcagtttgctctatacgaat	Protospacer
**********************.*************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1463635 : 1517881 47 Staphylococcus_phage(37.5%) protease,transposase NA
DBSCAN-SWA_2 2179816 : 2189562 8 Catovirus(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_LN879503
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 84579 : 97456 15 Enterobacteria_phage(66.67%) integrase,transposase attL 83185:83198|attR 86381:86394
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage