CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013910	Deinococcus actinosclerus strain BM2, complete genome	4 crisprs	csa3,WYL,cas3,DEDDh,Cas9_archaeal	0	2	0	0

Cas Category Instructions

Results visualization

1. NZ_CP013910

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013910_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013910_1

1018202-1018303

Orphan

Consensus_repeat	Method
GCCCGCATCGACGCCCTCGAAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013910_1

>merge|NZ_CP013910|1|1018202-1018303|CRISPRCasFinder
GCCCGCATCGACGCCCTCGAAGCGAAGATCAACGGCATGGACAGCGGCGCCGCCAGCACCGACGTCACCGCGCTGAACGCCCGCATCAACGCCCTCGAAGCG

>NZ_CP013910|1|1|1018202-1018303|CRISPRCasFinder
GCCCGCATCGACGCCCTCGAAGCG	AAGATCAACGGCATGGACAGCGGCGCCGCCAGCACCGACGTCACCGCGCTGAAC
GCCCGCATCAACGCCCTCGAAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013910.1\|WP_062157648.1\|1015854_1016652_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180270
NZ_CP013910.1\|WP_062157641.1\|1008240_1008744_-\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|225395
NZ_CP013910.1\|WP_062157647.1\|1014797_1015847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225831
NZ_CP013910.1\|WP_062157656.1\|1027765_1028461_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157644.1\|1013341_1013710_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157652.1\|1021606_1022623_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|225915
NZ_CP013910.1\|WP_062157658.1\|1030274_1030961_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|281941
NZ_CP013910.1\|WP_062159686.1\|1010300_1011398_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP013910.1\|WP_082689140.1\|1019490_1021536_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP013910.1\|WP_062157650.1\|1019104_1019437_+\|DUF1049-domain-containing-protein	unknown	unknown	gnl\|CDD\|377648
NZ_CP013910.1\|WP_062157642.1\|1009135_1010146_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NZ_CP013910.1\|WP_062157655.1\|1025879_1027769_-\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_CP013910.1\|WP_062157643.1\|1011515_1013006_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP013910.1\|WP_062157657.1\|1028600_1030187_-\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|365897
NZ_CP013910.1\|WP_058976045.1\|1022626_1023055_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP013910.1\|WP_062157649.1\|1016742_1017462_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350165
NZ_CP013910.1\|WP_082689141.1\|1024564_1025815_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP013910.1\|WP_062157653.1\|1023051_1024401_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_CP013910.1\|WP_062157645.1\|1013786_1014257_-\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|273638
NZ_CP013910.1\|WP_062157646.1\|1014400_1014727_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013910.1\|WP_062157648.1\|1015854_1016652_-\|enoyl-CoA-hydratase	gnl\|CDD\|180270	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase.	2.01053e-96
NZ_CP013910.1\|WP_062157641.1\|1008240_1008744_-\|DUF456-domain-containing-protein	gnl\|CDD\|225395	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown].	2.00727e-30
NZ_CP013910.1\|WP_062157647.1\|1014797_1015847_-\|hypothetical-protein	gnl\|CDD\|225831	COG3294, COG3294, HD supefamily hydrolase [General function prediction only].	1.73784e-125
NZ_CP013910.1\|WP_062157652.1\|1021606_1022623_-\|NAD(P)-binding-protein	gnl\|CDD\|225915	COG3380, COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].	2.34322e-64
NZ_CP013910.1\|WP_062157658.1\|1030274_1030961_-\|PspA/IM30-family-protein	gnl\|CDD\|281941	pfam04012, PspA_IM30, PspA/IM30 family. This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homolog in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma(54) containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator.	8.66086e-44
NZ_CP013910.1\|WP_062159686.1\|1010300_1011398_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP013910.1\|WP_082689140.1\|1019490_1021536_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	1.94452e-130
NZ_CP013910.1\|WP_062157650.1\|1019104_1019437_+\|DUF1049-domain-containing-protein	gnl\|CDD\|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	0.00114
NZ_CP013910.1\|WP_062157642.1\|1009135_1010146_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	8.23662e-155
NZ_CP013910.1\|WP_062157655.1\|1025879_1027769_-\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP013910.1\|WP_062157643.1\|1011515_1013006_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.52974e-43
NZ_CP013910.1\|WP_062157657.1\|1028600_1030187_-\|carboxylesterase-family-protein	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	2.32662e-138
NZ_CP013910.1\|WP_058976045.1\|1022626_1023055_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	2.91952e-51
NZ_CP013910.1\|WP_062157649.1\|1016742_1017462_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|350165	cd17765, PNP_ThPNP_like, purine nucleoside phosphorylases similar to Thermus thermophiles PNP. Purine nucleoside phosphorylase (PNP) catalyzes the reversible phosphorolysis of purine nucleosides. Thermus thermophiles PNP catalyzes the phosphorolysis of guanosine but not adenosine. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	5.41748e-121
NZ_CP013910.1\|WP_082689141.1\|1024564_1025815_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP013910.1\|WP_062157653.1\|1023051_1024401_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_CP013910.1\|WP_062157645.1\|1013786_1014257_-\|transcription-elongation-factor-GreA	gnl\|CDD\|273638	TIGR01462, Transcription_elongation_factor_GreA, transcription elongation factor GreA. The GreA and GreB transcription elongation factors enable to continuation of RNA transcription past template-encoded arresting sites. Among the Proteobacteria, distinct clades of GreA and GreB are found. GreA differs functionally in that it releases smaller oligonucleotides. Because members of the family outside the Proteobacteria resemble GreA more closely than GreB, the GreB clade (TIGR01461) forms a plausible outgroup and the remainder of the GreA/B family, included in this model, is designated GreA. In the Chlamydias and some spirochetes, the region described by this model is found as the C-terminal region of a much larger protein. [Transcription, Transcription factors].	1.30381e-50

>NZ_CP013910.1|WP_062157649.1|1016742_1017462_-|purine-nucleoside-phosphorylase
MSQIHVRAQPGDVAPYVLLPGDPNRARHIAETYLDGAREYTSHRQLLGFTGTYQGLPVSVQTTGMGCPSAAIVAEELARLGARTLIRVGTLGGATPSVAPGDLVIATAAVPNDGTTRQMLGGAPYAPAASFEVVEASVQAARASGAPHHVGLVMTEDAFYASTPEHARLWAGRGVLGFEMEASAIFLVAAQRGLRAACLTACSNDIGDPQLVPDDVLAAGVDRMVRVALDAIVTLAARD
>NZ_CP013910.1|WP_062157648.1|1015854_1016652_-|enoyl-CoA-hydratase
MTQLDEFEFNNVQIDQHGPIAVLTINRPRALNALSADTLSEIAQAVNLIVEDAEVGALIITGAGDKAFVAGADISEFENLEGVYDGRELSLAGQDVMHQISSLPIPVIAAVNGFALGGGLELALACDVRVAATTARLGLPEVSLGLIPGFGGTQRLARLVGAGRALDLMLTARQVKADEALGMGLVNYVADDALTKAREVAELMLKNAPIALSLVKEAVRRGMDTALEAGLEVEADLFGMTVATKDFREGVDAFLNKRRAEFQGE
>NZ_CP013910.1|WP_062157647.1|1014797_1015847_-|hypothetical-protein
MGAGEQKFRLQVEGGKVSDVAGREDSAAPAAKSRVVEFTTPRSKLIEEANQAIRSDLRDYPRALAAYDALRGDPEALAHWDMANYITMRKLGYNDHGRVHAFITGAAGMAITELLLEGGVKTDLMESGVGDADDVFLTVILGTMLHDIGNQIHRVGHEAHGVALALPILDRIMTPLYPDPFKRVKVRSFILGAINCHDLSPAPLTLEGGIVAVADGTDITKGRGRKAFSLGSVDIHSISALAVDQVVIERGRDKPVLISVTMNNSGGIFQVEEILAPKVIRTPMRRFVELRATTRPEGEEQILSRVRLDGDHFVMDLEGGEQVAVEVMDSQKQTQQAVVENLGIGTDSR
>NZ_CP013910.1|WP_062157646.1|1014400_1014727_+|hypothetical-protein
MTRDDTREYAPEGEVRDDGTTGELLNDKMAAEDLLRGAASAESSNPNDQPGFQDGVLGGSDFEDRQGTPNNDGDSDLEGRAAGGEGVHRSGGVDGGPARTTPLPGAKK
>NZ_CP013910.1|WP_062157645.1|1013786_1014257_-|transcription-elongation-factor-GreA
MTKDRITMTQRGYDKLVETLHFLKTTKREEISENMGRAIEDGDLRESAAYDEARMQQSENEARISELERQLERAMIIEEDATGGAGLGAKVRVRDAKGKEHQFELVGTYEVDVLKGKISDASPIGKALAGRRAGEKVTVQLPKGSAEFEILSVDYL
>NZ_CP013910.1|WP_062157644.1|1013341_1013710_-|hypothetical-protein
MRRLTRPLLPLLLGGALAAPAWVAPATTLYPVPNQASAPLRTLPALTRLNLNRCYALWCDVQLGAQRGWILREAVNLPGECRQLVPLGLKNLRRSEAAYLASRDPNRNGLACDDLERPLLAR
>NZ_CP013910.1|WP_062157643.1|1011515_1013006_-|GGDEF-domain-containing-protein
MITDPMETAWSERDTRSEHAETLALRFIQERGSRVVLAYLSWRHGRTRDAHDLITPVLHDLKVGEPSVWYARALNVAACVAHGMNHIDQALSHLEEQIRVSRLIRDTRLEAIGLHDFAAIIRAAHPVRAEQLLLDVIRIFEREPEPIGLPVAQFNLGNIYQEAGALETAVQFYFAALEAPGDVLKPVIETLILSSLFPLLETLGYDRELRIYRARLYALLRSTQDINVQAQAWIALSRHAAPAEIIEHVSALLPKLEAMDNHEYLALLYARLSEAYEALGNHADGLRTLRRSAQYEKVASEAQWRHARKLFESFLAWEEAERNHTHLLNYARQLEVEHAELTMLSRTDPLTGLANRHLLRERLEAWAGQDGALSLALIDIDLFKQVNDRWGHPAGDRVIQAIARLLQGVATPADLIVRYGGEEFLFVRFGGGSVVPACRQILDGVNGLVFHEGRDTFSVTVSIGVALDGQDFIRLIERADRNLYEVKQGGRNSLKV
>NZ_CP013910.1|WP_062159686.1|1010300_1011398_-|redox-regulated-ATPase-YchF
MGLAIGIVGLPNVGKSTLFNAITRAGALAANYPFATIEPNVGRVTVPDERLAALSRVFTKGERVPPIIPTFVEFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVVRCFEDGNVIHVAGRVDPIDDIETINTELILADLGGLEKRLQNLQKKAKGNDKDAKEQAELAEQIIAVLSEGKPARAGTYDAPIPKEFGLITTKPVIYVANVGEDNLTEDNAYVQQVREYAAAEGAQVVKISAQIEGELAEMPEDEARMFLEELGVQESGLDQLVKVGYDTLGLITFITSGEKEVRAWTIRRGEKAPEAAGEIHSDLERGFIRAEVIEWDKMVEAGGWAGAKSKGWVRTEGKEYVMKDGDIMNVLHNM
>NZ_CP013910.1|WP_062157642.1|1009135_1010146_+|type-2-isopentenyl-diphosphate-Delta-isomerase
MSAPEPTAIQTRKLRHIEACLRPDSQYARQTTGLEGVAWPYRALPERNLEDVNLRASFLGRPLAAPVLIGAMTGGAEAAGRINRNLAVAAQRLGIGMMLGSQRVMLERPEAAASFQVRDVAPDILLVGNLGGAQFLLGYGPEQARRAVQEVGADALAIHVNPLQEALQPGGDTRWAGLRDRLAEVIPDLDFPVILKEVGHGLDAASAALAAPLGFAALDVAGAGGTSWARVEQLVHHGEVRTPDLCDLGVPTAQALRDARLVAPGVPLIASGGIRTGLDAARALCLGAEAVAVARPLLEPALHSAEAAEDWLANFIHELRVALFVGGYAAVRDLRC
>NZ_CP013910.1|WP_062157641.1|1008240_1008744_-|DUF456-domain-containing-protein
MSLAFLIFLVAWVIGMIGTFVPALPATVIIFIGSVAATLVDGFQPWPDLPFLLTFLVITILISMVDNVASAWGARKYGGSKQAVWGAVIGGLVGILPVIPFGLIVGPLAGALIAELLIVRKAPMDALRSAWGTLVGLLAGIAAKVVLHLLIGLYELWRLWEPAKGVF
>NZ_CP013910.1|WP_062157650.1|1019104_1019437_+|DUF1049-domain-containing-protein
MRLVSFLQVLLLLGIAAYLALVTLENPGVIRLPLPTGSGELTVPVGMAVTLFLGLGVLFTSLLLLPGLWRERLRRAREARQRRQAEERLTATLQARLGALPETTDPEVTA
>NZ_CP013910.1|WP_082689140.1|1019490_1021536_+|single-stranded-DNA-specific-exonuclease-RecJ
MREWRVSPPLAQVLTGRHLTPALLDPPLVLTPNPALREAARRIVTAIRAKQRIRIHGDYDADGVSATATLVLGLRELGAIVHGFIPHRLNEGYGVHPDKVEEHAAACDLLVTVDCGVTNLDEVAALIARGVQVIVTDHHAPGDGFPDALVVHPHLTDGYDHDLHNLTGAGVAYHLLWAVHEELGLPEPRALTALATLGTVADVAPLIGENRALVRAGLDALKDTARPGLRALLDSGRVKRPTARDVAFILAPRINAAGRLGEADVALDLLTTSSAHDASRLAEYLEIRNQERRKLQDDMFQHALTLADPGEPALVVTHPDWHAGVMGIVASKLVDTYHKPVFIVAQGKGSVRSTPGISAVAGLRYSHDLLKRYGGHPGAAGFAIDPANMDAFRDRIHAYARQFPTPAPRVRLDAPLPALAASLDLLQETHTFEPFGEGHALPLWHLREPLTETRLVGKKGNSLQFKVAGLRGIKFDETDDQGGERDLGAHLVSSEWRGQTRLEFHGQALRVPAPIDLDAPTPTQPTPRLNPRAAMEHLRAGASAYAEGPVAAYLRDNVPGLTLVTGTDAHPGGELILYALPPEDTLRGWLHATRTRPAASLAFAFGPKTLAELEGSLSRHHLSAPPANPLLNPGTLEAAADAYRRWQWAHHWRTLSDDGWTASVHAMLGEPVREPEAISAD
>NZ_CP013910.1|WP_062157652.1|1021606_1022623_-|NAD(P)-binding-protein
MQGVLMVGAGLGGLAAARDLGAADQHVTLLDKARGVSGRAATRRVTLPDGREARLDHGARFFTARHDRTRALAEAGVREGWNAEWTRGIPRWEEGNVHGGGDGHPRYAPPQGLSTLGRTLARGLEVTTGVTVSSLERRPDGWRVHTRDGATWDAGTLLLNLPAPQLAPLLADLDLRGSNSEGTAERVAAVEYAPCWAAGIVLECDLEASWPALRADHPVLEWLAREHTKRPAGHPPALTLHATPEWSRANLERTPDEVLPELLSATAEITGDLPPSLHTFAHRWRYAIPTRPAPGPCHWDPELRLGWCGDWFTPDEHGPRVETALLSGWTLARRVTGT
>NZ_CP013910.1|WP_058976045.1|1022626_1023055_-|CoA-binding-protein
MTLVTQTAQVRQILTEHRVIAVVGFHHDAMKPAYYVPEYMHRQGYTIIPVNPALAARGESFFGHRAVATLAEITTPVDIVDVFRRSDKVRGHLPDILAMPTPPKVVWLQLGIRDDATARELAAHGIDVVQDRCLLADHRALL
>NZ_CP013910.1|WP_062157653.1|1023051_1024401_-|glutamate-1-semialdehyde-2,1-aminomutase
MTTELQAAVLPAPTAQSEALFARARAVTPGGVNSPVRAFRSVGGTPRFIARADGAYLTDADGTRLLDYIGSWGPMILGHNHPAVRGAIADALQYGTSFGAPGEREVLLAELVTRLTGVDRVRFVSSGTEATMSALRLARGVTGRKFIVKFRGNYHGHADGLLVEAGSGLLTNADGALGAAAPSSAGVPEEYAGLTLVSEYNDPAALDALMTARGSEVAAVIFEPVVGNAGVLIPTPEFLAALHRVKTHGALLIADEVMTGFRLSLGGATGLLGLRPDLICWGKIIGGGLPVGAYGGHAEVMDFVSPQGPVYQAGTLSGNPLAMAAGLATLSALEADPDLYARLGAYTTALADGLRDAASAAGVPVSINHIGSMLTAFHLDAPDGSVRTYTDAAASDTKAFARWFQGMLGRGVYWAPSQFESIFVSGAHGDAELNATLDAARAAYQDLGA
>NZ_CP013910.1|WP_082689141.1|1024564_1025815_+|glutamate-5-semialdehyde-dehydrogenase
MGVRARAAARVLRSLPTARKVAALHAIAAGLRANAPTILAANAQDVQAAVEAGLPEAMVARLRLDARLLDGIAADVEAVSRLPDPVGETTPAQVQPSGIRVSTRRVPLGVLGVIYESRPNVTVDVAALALMSGNAVILRGGKETVRSNAALEAVIHAALRGQGLPADGVQVIRDPARERMLDLLKLDDLVDAIIPRGGAGLHRYCVESATVPVIVGGIGVVHVYLDPSFTRDPEDRARALEIVRNAKVQKPSACNALDTLLIHERALDALPDIARDLQAHGVTLRTDPAAHAALSDAGISSDPATAADYGTEFLALTASVKTVSSFEEALDFIAARGNHTDVILTRDEAQAGRFIEDVDSAAVVVNASPRFNDGGQLGLGAEVAISTQKLHARGPMGLRELTTTKWVVEGNGEVRG
>NZ_CP013910.1|WP_062157655.1|1025879_1027769_-|1-deoxy-D-xylulose-5-phosphate-synthase
MTDSVKPSGTPLLDRVSSPDDLKTLSREQLPALAQELRDEITRVCSVGGLHLASSLGATDLIVALHYVLNSPRDRILFDVGHQAYAHKMLTGRRDQMATVKKEGGLSGFTKVSESPHDAITVGHASTSLANALGMAMARDALGQDYKVAAVIGDGSLTGGMALAALNTIGDMNRRMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAMEAVSKPLASFMSRAKSSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLMERLVDLDGPTILHVVTKKGKGLSYAEADPIYWHGPGKFDPSTGEFSASKAYSWSNAFGDAMTELAAQDPRTFVITPAMREGSGLVGYSKAHPNRYLDVGIAEEVAVTAAAGMALQGLRPVVAIYSSFLQRAYDQVLHDVAIEHLNVTFAIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTHDGPFAVRYPRGNTTPVPEGTWPELEWGTWERVQDGDDVVILAGGKALEYAQKAAADLDGVGVVNARFVKPLDEAMLRDVARTARAIITVEDNTVVGGFGSAVLEFLNAEGIKTPVRVLGIPDEFQEHATVESVHARSGIDAQAIRTVLAELGVDVPIGV
>NZ_CP013910.1|WP_062157656.1|1027765_1028461_-|hypothetical-protein
MPAPRFPLAAVLAGALCAALGSCAPQATAPGTVQSSTPLTRASFYPQETGLQWAYLPEGEAAGSTPYVVQNLGPTLFGGEAVNASRMTGRGADQTWYRVTDAQGVKLLGIRKPGVTVRLQPAWLEYPAPDAWRAGLTWQGQSQVTLVADDGSVKGSGTLSYSYLVQERRAVTTPGGRFDVWVVTRQISDTVGGLFPATQQLWFTPFVGEVRTPEGLLLTERNFAARSGGQP
>NZ_CP013910.1|WP_062157657.1|1028600_1030187_-|carboxylesterase-family-protein
MQTRIGKGRAALLATLLGTGSWAAGQTGAPGVTTAQGPVQGVTKGAVTQYLGLPYAAPPTGPNRWRPPQPAPTWTSTRAADQLSPVCTQVISALFALPSETVGDVKGQEDCLYLNVYVPQGRPGPLPVMVWIHGGAFVNGSAGLYDASELARREGVIVVTLNYRLGPLGFLALPELDQESTDGTSGNYGFMDQQAALRWVQANIAAFGGDRKNVTLFGESAGGYSICAHMASPGSAGLFQKAVIMSGLCGSPGNTVSASEAAQRNVAYASRLGCQKDTLACLRSLDPARLAKAKVPGVRPLSNLVWAPVHGGEVLPRPLLETFQNGVFNKVPVVAGTTRDEGRLFVKVGVPEGRTMSLPLYWGAAGLLTGVPNVTRALREYPGRGEGTPALAFSNMFTDVVFACPAVNVAGALSRFVPVYAYEFADPQAATEIPSPPDLPGLGSAHSSELVYLFRTRLPGLGDPAAFTSAQAGLADAFAGVWGRSRAPGSRAGRRTTRRAGTCRSSRRRAMRPARRSYRTTGVTSGTA
>NZ_CP013910.1|WP_062157658.1|1030274_1030961_-|PspA/IM30-family-protein
MSILDRLSRLLRANVNDLISKAEDPAKIIDQALRDMRAAYAEARSEVAAAMSQNAKLEREANTNRRMASEYEKKAEEALRGGSEELAREALRRSQNAKDLAAGFEEQLGVQSQTVEQLKTQLRALEAKIDEMESKKSLLAARQKTAQAGATLDRVSGFSKAGGAMDAFEEMEQKVSGMEDRNRAMQDLRKENDFDAQLKDLGRGQALDDAMAALKAKVQGGGGSNSGS

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Crispr_ID: NZ_CP013910_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013910_2

1393183-1393284

Orphan

Consensus_repeat	Method
CAGTACGAGAAGTTCCTGACCTGGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013910_2

>merge|NZ_CP013910|2|1393183-1393284|CRISPRCasFinder
CAGTACGAGAAGTTCCTGACCTGGAAGCAAGGCCGCGAGAAGGCCCGGCTGGAAGCCAAGTACGCCGCGCAGGAGCAGTACGAGAAGTTCCTGGCCTGGAAG

>NZ_CP013910|2|2|1393183-1393284|CRISPRCasFinder
CAGTACGAGAAGTTCCTGACCTGGAAG	CAAGGCCGCGAGAAGGCCCGGCTGGAAGCCAAGTACGCCGCGCAGGAG
CAGTACGAGAAGTTCCTGGCCTGGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013910.1\|WP_062157953.1\|1381285_1382881_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP013910.1\|WP_062157963.1\|1395163_1395754_+\|pyridoxal-5'-phosphate-synthase-glutaminase-subunit-PdxT	unknown	unknown	gnl\|CDD\|237411
NZ_CP013910.1\|WP_062157958.1\|1390173_1390503_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380395
NZ_CP013910.1\|WP_082688972.1\|1384217_1384958_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157957.1\|1386791_1389977_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235681
NZ_CP013910.1\|WP_062157968.1\|1399927_1400779_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293839
NZ_CP013910.1\|WP_062157956.1\|1385025_1385778_+\|tryptophan-rich-sensory-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157961.1\|1393799_1394189_+\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP013910.1\|WP_157445441.1\|1379172_1380084_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl\|CDD\|224617
NZ_CP013910.1\|WP_062157965.1\|1398302_1398743_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_CP013910.1\|WP_062157964.1\|1395809_1397189_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP013910.1\|WP_062157952.1\|1380681_1381206_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157966.1\|1398926_1399352_+\|damage-inducible-protein-DinB	unknown	unknown	unknown
NZ_CP013910.1\|WP_062157967.1\|1399348_1399903_+\|inosine/xanthosine-triphosphatase	unknown	unknown	gnl\|CDD\|376669
NZ_CP013910.1\|WP_062159721.1\|1397272_1398247_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381312
NZ_CP013910.1\|WP_062157954.1\|1382952_1384107_+\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|239065
NZ_CP013910.1\|WP_062157959.1\|1391153_1392428_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP013910.1\|WP_157445204.1\|1380080_1380623_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224669
NZ_CP013910.1\|WP_062157970.1\|1401368_1402019_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP013910.1\|WP_062157962.1\|1394270_1395161_+\|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS	unknown	unknown	gnl\|CDD\|179769

Protein	Function_ID	Function_description	E-value
NZ_CP013910.1\|WP_062157958.1\|1390173_1390503_-\|hypothetical-protein	gnl\|CDD\|380395	cd06990, cupin_DUF861, domain of unknown function DUF 861, cupin domain. This family contains proteins which seem to be specific to bacteria and some fungi. The function of this family is unknown but contains a cupin domain without a metal binding site. Cupins are a functionally diverse superfamily originally discovered based on the highly conserved motif found in germin and germin-like proteins. This conserved motif forms a beta-barrel fold found in all of the cupins, giving rise to the name cupin (cupa is the Latin term for small barrel).	0.000784856
NZ_CP013910.1\|WP_062157957.1\|1386791_1389977_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP013910.1\|WP_062157963.1\|1395163_1395754_+\|pyridoxal-5'-phosphate-synthase-glutaminase-subunit-PdxT	gnl\|CDD\|237411	PRK13525, PRK13525, pyridoxal 5'-phosphate synthase glutaminase subunit PdxT.	5.46294e-104
NZ_CP013910.1\|WP_062157968.1\|1399927_1400779_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293839	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.62413e-86
NZ_CP013910.1\|WP_157445441.1\|1379172_1380084_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl\|CDD\|224617	COG1703, ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism].	6.93098e-119
NZ_CP013910.1\|WP_062157961.1\|1393799_1394189_+\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.24799e-22
NZ_CP013910.1\|WP_062157954.1\|1382952_1384107_+\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|239065	cd02152, OAT, Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in the arginine biosynthetic pathway. Members of this family may experience feedback inhibition by L-arginine. The active enzyme is a heterotetramer of two alpha and two beta chains, where the alpha and beta chains are the result of autocatalytic cleavage. OATs found in the clavulanic acid biosynthesis gene cluster catalyze the fifth step only, and may utilize acetyl acceptors other than glutamate.	1.14655e-176
NZ_CP013910.1\|WP_062157964.1\|1395809_1397189_-\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.46992e-62
NZ_CP013910.1\|WP_062157967.1\|1399348_1399903_+\|inosine/xanthosine-triphosphatase	gnl\|CDD\|376669	pfam01931, NTPase_I-T, Protein of unknown function DUF84. NTPase_I-T is a family of NTPases with supreme activity against ITP and XTP. Active site analysis and structure comparison of YjjX strongly suggested that it is an NTP binding protein with nucleoside triphosphatase activity. YjjX exhibits a mixed alpha-beta fold.	2.97387e-57
NZ_CP013910.1\|WP_062159721.1\|1397272_1398247_+\|aldo/keto-reductase	gnl\|CDD\|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	2.06866e-97
NZ_CP013910.1\|WP_062157953.1\|1381285_1382881_-\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	1.64578e-153
NZ_CP013910.1\|WP_062157959.1\|1391153_1392428_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP013910.1\|WP_062157965.1\|1398302_1398743_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.84288e-69
NZ_CP013910.1\|WP_157445204.1\|1380080_1380623_+\|hypothetical-protein	gnl\|CDD\|224669	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown].	6.31444e-59
NZ_CP013910.1\|WP_062157970.1\|1401368_1402019_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	6.86119e-24
NZ_CP013910.1\|WP_062157962.1\|1394270_1395161_+\|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS	gnl\|CDD\|179769	PRK04180, PRK04180, pyridoxal 5'-phosphate synthase lyase subunit PdxS.	0

>NZ_CP013910.1|WP_062157959.1|1391153_1392428_+|transcription-termination-factor-Rho
MTDAHQSLPFHELQQKILPELHLIAAGYGIENYRKLKKDALALAIMERQAASEGQLLARGFLEISPDGYGFLQADLLDPNSRTVLISAGVIKQYHLRTGDEIIGRARKPRENERFGSLVQVEAVNGVDPETARRRPRFDDLTPTFPDAQLVLEDPSMDDGLSLRVVDLLVPIGRGQRALIVAPPKAGKTSLLKKVANSIVKNYPDVTVMVLLVDERPEEVTDFRESVQGAQVIASTFDEPPQHHVRVAEFVHERARRIVEEGGHVVILLDSITRLARANNLVTPPTGRTLSGGLDSNALHWPKRFLGAARNIREGGSLTILATALVETGSRMDDVIFEEFKGTGNAELVLSRRLEERRIFPALDILKSGTRREELLLQPEVLKKMWLLRKVISDMDPADAMEMLLSRMGKTRNNVEFLAALAGG
>NZ_CP013910.1|WP_062157958.1|1390173_1390503_-|hypothetical-protein
MHLTDIPFGVTTWADVPATEHPGERGAAVWRTRQFGLVRVRMVEYSPGYLADHWCEKGHILLVLAGQLDTELADGRTFTLRPGESYQVADHTEPHRSSTDVGATLFIVD
>NZ_CP013910.1|WP_062157957.1|1386791_1389977_-|isoleucine--tRNA-ligase
MTDKKTLFTPVQGNPNFPALEQGILDFWKRERVFERSLEQTQGGPVFTFFEGPPTANGQPGVHHVQARSFKDLFPRFRTMQGFHVPRKAGWDTHGLPVELGVEKKLGLNSKREVEAYGIDRFNAECRASVFEYEAEWRRFTERMGYWVDLDDAYMTLHKDYIESIWWSVKNLSEKGLLYKGFRVAPYCPKDGTTLSNAEVSEGYKDIQDPSVYVPFRLTDPASLGLEDGAAFLVWTTTPWTLPYNVGVAIHPDFEYVAARDKDGHVLILAASLKTEVLGEEAEVVRTFKGSELERVAYQPLFTEAYEAEGEGKPVWMSGLDTYVSDSDGTGIVHTAPAFGEDDMRLARNYGFPVIVGVDGEGKHRFGPWKGVFFRDANTEIVRDLRARGLMWREKNFLHAYPHCWRCGTPLMYYATESWYLNNTRLKERLIELNQTIDWHPPHIRNGRYGGWLENLIDWNLSRNRYWGTPLPVWEAEDGEYRVIGSYAELAELSGRPELTGPDFDPHRPFVDDITFEDGGKTFRRVPYVMDVWYDSGSMPFAQHHYPFENREKFENGGFPADFIAEAIDQTRGWFNSLHQIGTMVFDSVAYKSVICSGHILDEKGAKMSKSKGNVVNPWDVFEQYGADAARWYMYVSAPPELSRRFGMNLVGEAFRSYFLTLWNTYSFFVLYANLDQPDLTAAAPAAERPEVDRWLLAKVQALIGTVTAALENYDPTGASRALQDFVVEDLSNWYVRRNRRRFWAGDDGADHNAYATLHYALVTVTQLTAPFTPFLAETLYGNLVRSLVPDAPDSVHLTPWPKVDEALAAPTLVGEMDAVLRVVSLGRAVRGQTGMRQRQPLPKVMVRARTADQTQALGRFAEQLKEELNVKEVELIDQFTELVSYVLRPNLPVLGKKFGKAVPQVRAALAAADASEVARFVRDGKQFEVVAPTGERFELGPDEVLVDAKSPEGFAAQEEAGYLVAFDTTLTRELELEGLARDLVRGVQDARKKAGFEVQDRIALHLDLSGDAREAAEAWQEYLMSETLAETLVFAAADGFEAELEGGKAYLQKLDTASHN
>NZ_CP013910.1|WP_062157956.1|1385025_1385778_+|tryptophan-rich-sensory-protein
MTGLPRQITLLLATILTLVMNYLSNALPLFGNSNKEVSDALPNAFTPAGLTFAVWGPIFLGLLAFAVYQALPAQRGPRYDRLFWPFLLGNLLNVSWLLAFQSLNFGPSVIIMLALLASLIWLYLTVRGLPPQGAERWTLALPTSLYLGWISVATIANITAYLVSVGVTTGALGLSAPVWSAVLVVIAAAIGVFFLARFHDYAFALVLLWAFYGVYVARPDAATVVTGVAIAAVLVVLGALLSLRTRRTAL
>NZ_CP013910.1|WP_082688972.1|1384217_1384958_+|hypothetical-protein
MARPLDFTYPSNRVAALGLLGTVALARLRGRGWADAIGAGGTAFLAWATARELDPDFTGTANAALPVAAVAGLVSRGVGLAPLLPAVAVLSGLRGIAGTTGETLTRTDHLGLLAQSLAAAGTGGAVGALVAGAAPLLAEGGRSVTPLMGALLPPLAPARGGSWTGALLSAAALPLARDLTAPEPVQSACDRAPRAVRAGEVRRARQVAALALAAGLLTRQSRGLLPLAAACLTVAARRAGANLKNT
>NZ_CP013910.1|WP_062157954.1|1382952_1384107_+|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSLTFPTGFTAAAMAAGIKPSGKTDLSGVTSAADCTWAFAGTRSTTAAACVTRNRDLYAQGAPIRALLVNAGNANAATGTRGAGDNADMADAFGSVLNVQPDAVLTASTGIIGHLLPMDRVLSGIEHLPDELESGADAFASAIMTTDTRPKTAEATLSSGARIVGTAKGSGMIHPDMATMFAFAFTDAQIDQMALREAFPAIVNRTFNAVTVDGDTSTNDMAVVLCNGQAGPTDLAEFLTALEGVMRDLARQIAADGEGATKLLTVQVSGARSEAEALAAARTCCVSPLLKSAVHGNDPNWGRVIMAVGRSGAGVNIEKLRVTVQGHPVFQGKPLPYDDAQVSESMKAEEVVFTIDLGVGDARGEAWGCDLSAEYVSINADYTT
>NZ_CP013910.1|WP_062157953.1|1381285_1382881_-|choline-dehydrogenase
MTSRDAGQGRVDFIVVGAGSGGCVAARRLLDAGARVLLLEAGGPDSHPLIRAPGAFNKLFRTAVDWNLTTVPQPRAAGRSFYWPRGKVLGGSSAINATIWIRGSKRDFDSWGEGWTWEDVLPELRALESYRGPASETRGTDGPMPAGARGASHELSHAFVKAAAVGLGLPVVESFNDGVLDGAGLLESNHQGGERFSAFRAFLRPVLDHPNLTVLTGAHVLELLWEGQRAAGVRLRWRGRTLDAPAGGVILTAGAVQTPQLLMLSGIGPRAELERHGLPVRVALEGVGGGLQDHLAVPVISRSRITSLDRVPQGEALARYLWNRSGPLSSNVAEASAFTHARPGLSAQDDPDIQFHFGPAYFRDHGFRTEPGNHFTVGPVLVDVHSRGRLTLASRDPHAAPVIDPGYLTDDRDVQSLVAGVRQAREIASSPPLSELRGAEVLPGEGHRSDAALRQHVARECATLYHPVGTAALGDGEAAVVNRELAVRDVRGLWVGDASVMPRIIHANTNATSMMIGARAATFALRAAGRD
>NZ_CP013910.1|WP_062157952.1|1380681_1381206_-|hypothetical-protein
MKPRSLLLTLAAALTLGAASAVPVKLGNVPVTVEPNAKLLTLSAAGIRTAFPSAAGRPDAVFMTEDRKVSVAFEWRASKLNKTEVGTLVEQFPSVIRAQVPNVKTLKANLLQVSGTPWAQFIFTTPSQGDELRRELLVTSAGGRMLVVTIAGNLKDYARNEAIVRTLTNSVRVN
>NZ_CP013910.1|WP_157445204.1|1380080_1380623_+|hypothetical-protein
MKAHLPTKASAVAGWLFAFLVVQRLLELRVARSNERWAREHGAQEYGQSHYPLFFVLHPTWMLLTLLEGRASRGRVNPWALALFIVAQPLRYWVIRTLGRYWNTRILIVPGGQRVTGGPFRYLKHPNYVVVALEIAAAPLAVGAWRTALAYTLLNAALLLGIRIPAEERALAEYRRSQQK
>NZ_CP013910.1|WP_157445441.1|1379172_1380084_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MLDRYRAGDLRALARAVTLAEAGLPAARPLLRAARERGARAVVLGVTGSPGSGKSTLTDALIAFLRQRGQRVAVLAVDPSSPYSGGAILGDRIRMLRHHADEGVFVRSLASRGALGGLSERTLGVLALMEGAGFDWVILETVGVGQSEVDVAAACDHTLLVLTPAGGDGVQAFKAGIMEIADVIAVNKADLPGADRTIRELMAAQGLGAHDQHTWFAPIRRTVAAKGEGIGAIVAAVEAHRAHLGAEGLQRRREARAALEVRTLVQERLLRRARELGRDLYARVARGDLDADDAADTLLRGNL
>NZ_CP013910.1|WP_062157961.1|1393799_1394189_+|response-regulator
MTGGAVRLLVVDDEEQILELLDLTLAIHGYEVCTASSGPRALELLAHEAIDVIVMDVLMAPWDGFETVRRMAAQHGPALPPVVFLSGLARPAVMPELGPDVVQEYLVKPFRPSQLVERIEEARRRRPSS
>NZ_CP013910.1|WP_062157962.1|1394270_1395161_+|pyridoxal-5'-phosphate-synthase-lyase-subunit-PdxS
MTEATTGTPALKQGFAEMFKGGVIMDVVTADQARIAEAAGATAVMALERVPADIRKDGGVARMSDPKMIKEIIGAVSIPVMAKVRIGHIVEAQILQALGVDFIDESEVLTPADDQYHILKHDFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVIEAVRHARTVLGEIKHIQARPAEELMTVSRDLQAPYELVRYVHEHGKLPVVNFAAGGVATPADAALMMLLGLDGVFVGSGIFKSDNPERRAQAIVKAVTHFQNADVLAEISEDLGAPMTGINIDDLIPAERLAARGW
>NZ_CP013910.1|WP_062157963.1|1395163_1395754_+|pyridoxal-5'-phosphate-synthase-glutaminase-subunit-PdxT
MARIGVLALQGAFREHRAALDRLGAQVTEVRLAADLDGLHGLILPGGESTTMARLMSEYALWEPLRAFHARGGQLWGTCAGAILLSREVQGAPPQFGRQDSLGLLDVTVQRNAFGRQIDSFTTGLDVRGLTGAFPAVFIRAPAFARVGEGVEVLAEYDGQAVAVRQGRVLATAFHPELTGDDRLHDLFLQGCLTPA
>NZ_CP013910.1|WP_062157964.1|1395809_1397189_-|MFS-transporter
MNALPNLSPQARQLATTGLVVGVFLAALEASVVATAMPSVIRDLGGETLYALPFAVYLLTSTVSSPLWGRASDVVGRRRLYLAAVLIFLIGSALCGQSHSMAMLIAARVVQGVGAGGLLPLTLTMVGELYSLQERSRVQSFISGVWGVSGLVGPLLGGWLTETLSWRWTFYASLPFGAAALLLALRFLPETGRPRPARLDWAGAALFTLGSGLVVWGLEQRQWLLVILGAVTLAGAVVLERRHPDPLLPMRALRERLPRVAFAGNLLGGAAYFGVIAYLPLYAQGVTGGGATAGGAILTPMLVGWTLTAIVTARLVKTVPLARIAQVGFAVLVVMFGALIFAVHAPLWVTSALGFAVGTGMGFSMLSLLLAAQETSSREELGAVTSGVLFARQMGGALGTALMALLIGSAAIQSGGFELAEGLRRAYLLALGLVAVALALSLRLRVTHPAQAPAPASND
>NZ_CP013910.1|WP_062159721.1|1397272_1398247_+|aldo/keto-reductase
MHQRPLGRTGLNVTEIGYGAWGIGADMWKGAQDDHSLDALRRYVELGGNFIDTAMGYGSGHSERLVGQVAREHPGTLVATKISPKNMEWPATPGTTADEAFPGQYITDMTRASLERLGLPTIDVQQLHVWNDSWLGQGDWQDAVAQLKRDGLIRAFGISVNDHQPDNAVRAVEAGAVDSVQVIYNVFDQSPQDRLLDACREHGVGVIVRVALDEGSLTGTLTQDSTFPEGDWRNGYFGGDRLSQLQPRLRAIEQDLGIHTDQLAETSLRFVLSHPAVSTVIVGMRSVRNVERNAALADGRGLPQDQVERLRAHRWDRNWYQSAE
>NZ_CP013910.1|WP_062157965.1|1398302_1398743_-|response-regulator
MTQTHTPIPIHLLLVEDSEADIILTQEAFQEAGIHTHLHVARDGVEALDFLRDPAQPRPDVILLDINMPRMNGLEVLREVKQDPQLMTIPVIMLTTSRAEEDILRSYQAYAASYVVKPVEFGKFYEAIQALGRYMLTIVRLPPRAS
>NZ_CP013910.1|WP_062157966.1|1398926_1399352_+|damage-inducible-protein-DinB
MNVLQYALAGGAAFRSPGDLLGGLTLAEATRAAPGVPYTLAELLAHLQVTQRASLDLASGRTDRWPDGLDVWPGAPASDAELVALLADLQTGLAEAQALAAGPSSRARDVLTDLAAHSAYHWGQVALIRRLHGTLPAPERA
>NZ_CP013910.1|WP_062157967.1|1399348_1399903_+|inosine/xanthosine-triphosphatase
MTVIVGSLNPGKVQPVQEVFAALWPDLAVRGAAVPSGVRDQPLGVGETRRGALNRARRAARLPGATWGVGLEGGVRVERGQGWLFGVVAAARAGDGLLLSARTAELPVPPAVLPRVLAGEELGGVMDELLGTHDLKRGAGTVGALTGGLVTRPGVWAQALALALAPARHPELYPPALPVRTNVR
>NZ_CP013910.1|WP_062157968.1|1399927_1400779_+|MBL-fold-metallo-hydrolase
MSTWIQSRQIGPAAVHSLTDGQFRLDGGAMFGSVPRVLWERATTPDELNRIRLRINPLLIQLGGENILVETGMWDQGGEKFEAMYALDRDETVFRGLDALGLSPGDIHLVINTHLHFDHAGRNVTTLGDPTFPNARYVVQKQELHDARHTHERSRASYLPAYIDPIEHAGLFEVVDGEHELRPGLSVLPLPGHNLGQQGVVLRQDGQTLVYVADLIPTLAHAPTAYIMGYDLYPVTTLETRKRYLGQWFEEGAIICTPHDPDTAFAQLHPNPKGGFTLSAAQP
>NZ_CP013910.1|WP_062157970.1|1401368_1402019_-|glycosyltransferase-family-2-protein
MSVSASSPAVVIAAFNEEDTVAEVVRVARTFTAEVVVASDGSVDDTARVAREAGAVVVDLPQNVGKGGALHAALLATHAEVVVLLDADLTGLSAEHLRMLSDPVLRGELDMSIGVFEGGGFVTDWGNKLTPHLSGQRSCRREWLLAVPDLAAERWPEPAITRHLKATGARWAYVELPNVAQVVKEKKRGFWGGAKARTKMYVSLLTYRARRRKNGA

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Crispr_ID: NZ_CP013910_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013910_3

2065530-2065639

Orphan

Consensus_repeat	Method
CCGGTGACGGTGCCCCAGGCGTGCCCGTCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013910_3

>merge|NZ_CP013910|3|2065530-2065639|CRISPRCasFinder
CCGGTGACGGTGCCCCAGGCGTGCCCGTCTGCGAGGGGGCGTAGCAGGGTTGAGGGCACCAGCGCGCCAGCAGACAGGCCGGTCACGGTGCCCCAGGCGTGCCCGTCTGC

>NZ_CP013910|3|3|2065530-2065639|CRISPRCasFinder
CCGGTGACGGTGCCCCAGGCGTGCCCGTCTGC	GAGGGGGCGTAGCAGGGTTGAGGGCACCAGCGCGCCAGCAGACAGG
CCGGTCACGGTGCCCCAGGCGTGCCCGTCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013910.1\|WP_082688957.1\|2060387_2061161_-\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_CP013910.1\|WP_157445286.1\|2061361_2062810_+\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377857
NZ_CP013910.1\|WP_157445291.1\|2064115_2064388_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158489.1\|2068442_2068724_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158485.1\|2064384_2065353_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158482.1\|2057662_2058124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158492.1\|2069532_2069973_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_157445285.1\|2058414_2058858_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_082689021.1\|2059114_2060113_-\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP013910.1\|WP_062158494.1\|2070601_2070871_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158487.1\|2066463_2067921_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_157445289.1\|2063026_2063596_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381606
NZ_CP013910.1\|WP_157445295.1\|2069101_2069338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158490.1\|2068720_2068921_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158488.1\|2067978_2068443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_157445282.1\|2058130_2058463_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_157445287.1\|2062813_2063023_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062158493.1\|2069969_2070599_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274586
NZ_CP013910.1\|WP_157445297.1\|2070870_2071119_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_157445294.1\|2068938_2069097_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013910.1\|WP_082688957.1\|2060387_2061161_-\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.41348e-11
NZ_CP013910.1\|WP_157445286.1\|2061361_2062810_+\|DUF262-domain-containing-protein	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	5.20101e-13
NZ_CP013910.1\|WP_157445289.1\|2063026_2063596_-\|hypothetical-protein	gnl\|CDD\|381606	cd13403, MLTF-like, membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins. This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	8.47195e-07
NZ_CP013910.1\|WP_082689021.1\|2059114_2060113_-\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.29148e-31
NZ_CP013910.1\|WP_062158493.1\|2069969_2070599_-\|hypothetical-protein	gnl\|CDD\|274586	TIGR03454, partition_RepB, plasmid partitioning protein RepB. Members of this family are the RepB protein involved in replicon partitioning. RepB is found, in general, as part of a repABC operon in plasmids and small chromosomes, separate from the main chromosome, in various bacteria. This model describes a rather narrow clade of proteins; it should be noted that additional homologs scoring below the trusted cutoff have very similar functions, although they may be named differently. [Mobile and extrachromosomal element functions, Plasmid functions].	0.00204204

>NZ_CP013910.1|WP_062158485.1|2064384_2065353_-|hypothetical-protein
MLNDKPVRVTVEGWLHYQLVSEGGLIVEEGEQHNLILNSGLDYYAIHGIRGSVDVAHVGTGSTAPAVAQTGLAAPLASTRQIGTTYPATIRTAEGVYNYVLEREFGFGEANGNLTEWGYGPNGAASLSVRELFRDAQGAPIVISKDNTQKLRLTYTLQITVGPTTRTAGAVTIDGVGTRTGSYHLCGVGGHAGDLQIVDQIMVAQQPPGMFGGFQNCMSLYDDPAFRTSDYNLWRVMEGSAAGPAGGSAGAYVAGSYTRQGQTYTWDTSQFNGQIVGVTLSCATDYYNRLAWVWSFDPGQEVTKTDLDRLTLRGPSVTWGRA
>NZ_CP013910.1|WP_157445291.1|2064115_2064388_-|hypothetical-protein
MISPAAAPAELVQPAPVPVPVPVPVLAAGVAPRSSGSANHVAGSVEGALTDYSDLNACAWFVGGGWDVRNGRRMAPRGLSGLEDTSERRR
>NZ_CP013910.1|WP_157445289.1|2063026_2063596_-|hypothetical-protein
MPTPSTPTRAQLIDRCVAAIYKEVPARRLSPIATRDLATALVAVCAEESYPLDLAFSHAYAESALDVNALNRSSGAAGPLQVTAVAARQVGVAWPLTTAAAKVRAGVRYMKWLRSAYAECTGSVRTTLRHYGMGRGNWLRFNRGELTCSTTVSVARAELGCPGNRPYSATIIAIAQRHPELRTTSWWGS
>NZ_CP013910.1|WP_157445287.1|2062813_2063023_-|hypothetical-protein
MNKTEQTVLIGSGLVALAILAGSVIIAERLSRSLDEKNFWAGSNIPEVFQDVQEITNPLSKIAESWTRA
>NZ_CP013910.1|WP_157445286.1|2061361_2062810_+|DUF262-domain-containing-protein
MLLDGQQRLTTITILLAVIRDIARINGAPGSDLARDIQRDFILLDEDRAVFSLQLGTLDADFFKNNIQSDPPNNTKATLRSQKLLLDTYKFFRVQVENKIQGLTLENTIRYLKKLKNTLAERIKMVGIEVNSEDEAFQIFETLNDRGLRLSVHDLLLNFLMQKADSDQARQRIRTNWNKVIENVGLRKMGNFLRFMWVSHYGDIKSQALYREIRASFTNDGRNPVEFAVLCAEESTNYKALLDLDSNVLKGSIPYIRYLIRNLDSDRSIPVLLSGMSKLNENSLEKLAKLCIDITVRHSIIAQQDPSRLEAAMYKAAKSLRAAPNNLSENQKISIVKEEFNRINPANDVILSQIIHTELNRDQASYIIKAIAEKAQSQYGNIDLSEYTIEHILPRNREEGTWEGFQEPDLHIWNIGNLTVLEGTLNRREGNNEYADKLRTYAESDAIITRDIAHYHPEWSAASIEARARYYGGIAVRIWTGD
>NZ_CP013910.1|WP_082688957.1|2060387_2061161_-|IS982-family-transposase
MARYRLHHSLGRRAVIRQLHRWAKRYFSDLKRCSHQKLSDALLVALLLSRLVFKHPFPSIWWNILREDRHDLPSYTQAYTRGQRLLERLEAVATPSQSCTEVIVDSMPLPVCRPKRGKRCSFPGARWGYGTQGDVYGYKLHAWVTASGAIVQYLIRPANLHDTTVSYELNRRWPDFGGPRIIGDKGYCCLGYVFPPKSNTRYDTGWRPGRHPRLRKRIETVFSGLVEAQIRSVQTKTLRSLRLRVVLAILAHNLAQP
>NZ_CP013910.1|WP_082689021.1|2059114_2060113_-|transposase
MLQVVRLMQRSRSFESLCGLNPTEFALLAEHLEPLWTRAHRTSLLREGRKRRIGAGRQFKLDVPHRLLLTLIYLRHYLPMHLLGVLFEMDAANVCRNIHALLPLLEQALPAPLRARTLNSRKVTPDDAPRRRLRTLEDVLAAFPEIADIIVDGTEQLRGQPKKKKGSGPGKKAVGRPKDQKKFFSVKKGTHTLKTQVAVTPDGLVVHLSAPARGRTHDMKVLKQSRLLPRLPRGSRVWGDRGYTGVDKLCPQHEVIVPRMRPKGGMLSPEDRELNHQIAKVRITVENVVCKLKKFRICREFYRNDTRRHGLFWGCVAGLVNLRTVNRAPQFA
>NZ_CP013910.1|WP_157445285.1|2058414_2058858_-|hypothetical-protein
MSTLTWVRQLADVVSWAVFQVPVPPIPQPTGSGDTAFDWAWTLCLLLAVAAGLVWAARQRAAPTAGQRAALRIFLPVVLIWWLTVYGLSKFAFSQFGLLNSWQLAGTYGTPVRWGCCGGSWRPAPGLSWWLAWPRCSPRRCSCTAGP
>NZ_CP013910.1|WP_157445282.1|2058130_2058463_-|hypothetical-protein
MAEVFPAPLLLHRRTVTAGGLVAAVTMTNVFALNLFCDVPVKLFSGHLLLAALVLLALSWLLTALVVVQVGLSLRAGLRTLREGRVATRCSPAPLKTRGFNLIQEKPFNR
>NZ_CP013910.1|WP_062158482.1|2057662_2058124_+|hypothetical-protein
MRPHPAARPALTAALLLLPPALSGCAWGAYFPAITPLERQVNGVYEGEGNGPTGRVPYRLTLGLVERDGRASGSLVNLESRKVYAGSGSFKRLVDGTEITLHLFENGAHRANLYVVRRDTDGQVSLDGHLRTVLLGREALSYAVSLRPVPAQP
>NZ_CP013910.1|WP_062158487.1|2066463_2067921_-|hypothetical-protein
MDEATLTALLQRGPRAFEEGRDVDLWDAIEAYLRETLLSPAALSPYAYASAQYAVNEPETGWTIQGTPLSGPRSLLSATPATNYAGKVGYRYGAPADGLSASGSTHTLPVDLPGAAHVARVSFLWMLGAAGYTAPDGSVALEPCADTRYDVALIGPDGATVAEALDVSPRDARILSQRTLTVYRSNGTPVQLDVPAVAAVDLPVGRVLPGGAYGVRWTLRTVRPRYTVSEFQSVDTNAYPVADGGGSTIAALTPSPAWPDGRRSTGAVVFDLDLTVGVTSNMTEDAARFTGAQLIRTATPLGPSGTLASRWVLEFSLDDTPDVRAWGGQISFLPTFYPDARLHDELPYLLGITGGMGERSETVYSASLNPIDLALTLVHPPRRDDNLWTYGVRGGERYRLEVTRRDIEIVTSTGSLTTRARGWSWDYRLYNAAGELLQAQERRVEGGAGDLSSWRMAILTHPGHAGWLLGKPAPVTVHRWQEWRE
>NZ_CP013910.1|WP_062158488.1|2067978_2068443_-|hypothetical-protein
MFPDFTKYIPMLQSGLDDMKNCLAHLYAEAKATREATQAQQRALAFEFGVMDVQDTSRVAPRRLTQLPVIVEAETADRKEIDVEGLNQGRAVSRGFYANLGDGPFKVTLMGLGGQASTSHTVPPGTTISLTCLISKVIIDVVDGEPAKYQLYMQ
>NZ_CP013910.1|WP_062158489.1|2068442_2068724_-|hypothetical-protein
MITTIVLTLVYAVLLAYCARSVLFVLSGTARNYIEWSQGLGGFLYLVAVITHYVTPAAEFNWVIGSVGFALVVLPDVLHWLAPRLYQRLTERC
>NZ_CP013910.1|WP_062158490.1|2068720_2068921_-|hypothetical-protein
MQRPAGLLIIAVTVIMLALAGNSIWRNAPLDNTWSLFLGGVITAVLGVPEVLARRKEQSPPEGDKE
>NZ_CP013910.1|WP_157445294.1|2068938_2069097_-|hypothetical-protein
MKELTGTQLIRQGAFTAVGTLLVYGVVLSAVRFAESRRPKSTGCGCGCGGSK
>NZ_CP013910.1|WP_157445295.1|2069101_2069338_-|hypothetical-protein
MPTRPPVTTMPVAPAPTVLAPSVISPITDVWQRAGSTNPLQYASDSIISRLKDQKQQWPGGTPPWIFDERNPLPLLDR
>NZ_CP013910.1|WP_062158492.1|2069532_2069973_-|hypothetical-protein
MTKKFTPTMLLLAGAAVAMAAAGAAVLMRPDPLAGYGTDLGTPGNPIPNPSGFWDLVPDFGLHNNLVSGSYTSVWDRWVNSIAPPMPLAPRPGGLYGERYSDRYTYDTPAGTGAATTSSGFTPSGNTGTSSGSFGVSAGSLYGRGN
>NZ_CP013910.1|WP_062158493.1|2069969_2070599_-|hypothetical-protein
MKDGTAMLAVSVSLGALLLVGAGVGGYLLLKPRLSSPGSPSATTSGTPATGVPSLPIGNGVVAPIGPSASDIFAAQEAERKRQEEWRRADKIRELDQALSEAQNEIKRLTDQLNSIDAAPMSQEHIQAWSAKHMQSCYDAYTFGFGCNKRNDLSEGWDVKAKADWDQKMAAQKRPILTRLSELNTKQQNLIANLAQLGVTKQPFTVRTT
>NZ_CP013910.1|WP_062158494.1|2070601_2070871_-|hypothetical-protein
MRRPVLAVALLGVLATGGVALALTLRRPQVAAGGTGAPVTLPGKADASLPPVQVGVATGYAPSVLIDTGPVDYSYIGPGWAYAGVKKDW
>NZ_CP013910.1|WP_157445297.1|2070870_2071119_-|hypothetical-protein
MEWLAAVGALASPVASIVDSFTGTGKAKAEAAEAAANAQTAAIQAQIEHERLQAKTTQQTLTYGLLAVGIVALGVIAYRVVA

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Crispr_ID: NZ_CP013910_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013910_4

3201966-3202143

Orphan

Consensus_repeat	Method
GGTGAGGTTGCCGCCGTTCACG	CRT

3 spacers

The CRISPR arrays of NZ_CP013910_4

>merge|NZ_CP013910|4|3201966-3202143|CRT
GGTGAGGTTGCCGCCGTTCACGCTGGCGTTCAGGGTGGCGGCGCCGGTCAGGGTGAGGTTGCCGCCGTTGACGGTGACGGTACTGGGACCGCTCATCTGGGCGCCGGTCAGGTTGCCGCCGTTCACGTCGGCGTGGAGGCTGTGGGCGCGGCCCATCCGGACGTTCCCGCCGTTCACC

>NZ_CP013910|4|1|3201966-3202143|CRT
GGTGAGGTTGCCGCCGTTCACG	CTGGCGTTCAGGGTGGCGGCGCCGGTCAG
GGTGAGGTTGCCGCCGTTGACG	GTGACGGTACTGGGACCGCTCATCTGGGCGCC
GGTCAGGTTGCCGCCGTTCACG	TCGGCGTGGAGGCTGTGGGCGCGGCCCAT
CCGGACGTTCCCGCCGTTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013910.1\|WP_062159537.1\|3193434_3194325_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP013910.1\|WP_062159543.1\|3200869_3201532_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062159546.1\|3202841_3204230_+\|RNB-domain-containing-ribonuclease	unknown	unknown	gnl\|CDD\|223631
NZ_CP013910.1\|WP_062159536.1\|3191105_3193073_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_CP013910.1\|WP_062159549.1\|3205202_3206990_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|225201
NZ_CP013910.1\|WP_062159548.1\|3204777_3205131_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062159550.1\|3207639_3208812_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|226587
NZ_CP013910.1\|WP_062159905.1\|3207130_3207601_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_082689218.1\|3210153_3210903_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|319985
NZ_CP013910.1\|WP_082689219.1\|3211204_3211672_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236608
NZ_CP013910.1\|WP_062159544.1\|3201528_3201720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062159547.1\|3204413_3204683_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062159539.1\|3195246_3196377_-\|YbfB/YjiJ-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340869
NZ_CP013910.1\|WP_062159538.1\|3194318_3195227_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP013910.1\|WP_062159540.1\|3196565_3197990_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP013910.1\|WP_062159542.1\|3198711_3200577_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_CP013910.1\|WP_157445411.1\|3198111_3198591_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377663
NZ_CP013910.1\|WP_062159552.1\|3210917_3211208_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013910.1\|WP_062159551.1\|3208842_3210108_-\|DUF1800-domain-containing-protein	unknown	unknown	gnl\|CDD\|378055
NZ_CP013910.1\|WP_062159535.1\|3190343_3191036_+\|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl\|CDD\|284031

Protein	Function_ID	Function_description	E-value
NZ_CP013910.1\|WP_062159549.1\|3205202_3206990_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	1.46119e-07
NZ_CP013910.1\|WP_062159546.1\|3202841_3204230_+\|RNB-domain-containing-ribonuclease	gnl\|CDD\|223631	COG0557, VacB, Exoribonuclease R [Transcription].	2.48392e-95
NZ_CP013910.1\|WP_062159536.1\|3191105_3193073_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_CP013910.1\|WP_062159551.1\|3208842_3210108_-\|DUF1800-domain-containing-protein	gnl\|CDD\|378055	pfam08811, DUF1800, Protein of unknown function (DUF1800). This is a family of large bacterial proteins of unknown function.	3.36478e-107
NZ_CP013910.1\|WP_082689218.1\|3210153_3210903_-\|transcriptional-regulator	gnl\|CDD\|319985	cd16327, RseB, RseB, a sensor in periplasmic stress. This family contains the periplasmic protein RseB (also known as MucB or Mucb/RseB) which exerts a crucial role in modulating the stability of RseA, the transmembrane anti-sigma-factor that is degraded during sigma-E-dependent transcription caused by bacterial envelope stress. RseB binds to RseA and inhibits its sequential cleavage, thereby functioning as a negative modulator of this response. The protein is composed of two domains, the larger N-terminal domain resembling an unclosed beta-barrel that is remarkably similar structurally to LolA and LolB, proteins capable of binding the lipid anchor of lipoproteins, suggesting that RseA acts as a sensor of periplasmic stress with a dual functionality, detecting mislocalized lipoproteins as well as propagating the signal to induce the sigma-E-response.	6.41477e-06
NZ_CP013910.1\|WP_062159537.1\|3193434_3194325_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.000812852
NZ_CP013910.1\|WP_062159550.1\|3207639_3208812_-\|DUF1501-domain-containing-protein	gnl\|CDD\|226587	COG4102, COG4102, Uncharacterized protein conserved in bacteria [Function unknown].	1.50752e-48
NZ_CP013910.1\|WP_062159539.1\|3195246_3196377_-\|YbfB/YjiJ-family-MFS-transporter	gnl\|CDD\|340869	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.3939e-52
NZ_CP013910.1\|WP_062159538.1\|3194318_3195227_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.57841e-05
NZ_CP013910.1\|WP_062159540.1\|3196565_3197990_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.03415e-07
NZ_CP013910.1\|WP_062159542.1\|3198711_3200577_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP013910.1\|WP_157445411.1\|3198111_3198591_+\|hypothetical-protein	gnl\|CDD\|377663	pfam06480, FtsH_ext, FtsH Extracellular. This domain is found in the FtsH family of proteins. FtsH is the only membrane-bound ATP-dependent protease universally conserved in prokaryotes. It only efficiently degrades proteins that have a low thermodynamic stability - e.g. it lacks robust unfoldase activity. This feature may be key and implies that this could be a criterion for degrading a protein. In Oenococcus oeni FtsH is involved in protection against environmental stress, and shows increased expression under heat or osmotic stress. These two lines of evidence suggest that it is a fundamental prokaryotic self-protection mechanism that checks if proteins are correctly folded (personal obs: Yeats C). The precise function of this N-terminal region is unclear.	1.31456e-06
NZ_CP013910.1\|WP_082689219.1\|3211204_3211672_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.6729e-35
NZ_CP013910.1\|WP_062159535.1\|3190343_3191036_+\|7-cyano-7-deazaguanine-synthase-QueC	gnl\|CDD\|284031	pfam06508, QueC, Queuosine biosynthesis protein QueC. This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.	2.80482e-94

>NZ_CP013910.1|WP_062159544.1|3201528_3201720_-|hypothetical-protein
MTILHPTPYLPSLRELRASLRAHLTRLLTPDAARAHARTELRRTLDAEAHRARLQRALSGARP
>NZ_CP013910.1|WP_062159543.1|3200869_3201532_-|hypothetical-protein
MKEKIRRILDLIRAGKLTLDDAAPLLAALSPKLALTEGDREFVSALLGRPELDAGQVAEHIMLLRGVRDAGFGFAPPPPPPPQPPRRPQVVIGGQRPRGLDGLVDRITGGIDSMVENITGQVERELHGPHPDMHHPHMPPGPRILRIKVESQHGDEYNANIPVSLAPHLDRLIPPHGRSALESAGFTLDALRLLIEASPYPGPLIDAQDQHGNEVHISLQ
>NZ_CP013910.1|WP_062159542.1|3198711_3200577_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MKRLNPWLIVLFVLALFLMFSQAPLSGRSSVNYTQFKTLLEGGQVERVIVRESNANVTLKQPTSVEVNTAGGPQKRDIKDFTVRLPGSVATPDGNLIPLMQQQNVDLRFEQPSQWLGILLNFLPIILLFAMMYFFFMRAQGGQNGVMQFGQSKAKKYGKENRVPTKFTDVAGHEEAKRELVEVVDFLKNPGKYHQIGAEIPKGVLLVGPPGTGKTLLARAIAGEADVPFFSVSASEFMEMFVGVGASRVRTLFEDARKSAPAIMFIDEIDSIGRKRGAGIGGGHDEREQTLNQILSEMDGFDKSSSVIVLGATNRPDVLDPALLRPGRFDRQVTIDLPNLKEREAILKVHLRNKPMATGVDVPEIAKSTPYFSGADLKNVTNEAALEAARVGKTQIDMSDFYRALDKITLGLENGSLTISEQEKKAIAYHEAGHAVTAAVIPGSDKLQKVSIIPRGRALGAAFYLPEEQVLMSKERLENQLIVALGGRAAEEVFMGSVTSGAADDFRKATNIARKMVLEWGMGDNFKNMALTTDSGPVFLGEDMAKPKAFSEHTSQLVDEDVKRILTRAFERARELVTEYQQAMHEVADALLTQELITGDVVREAVSRVGGQAQPMPQTTA
>NZ_CP013910.1|WP_157445411.1|3198111_3198591_+|hypothetical-protein
MRQRGAWGTVAGGVLALALLAALGVWGLSWWSGARAQAVPYPEFRSLLEAGQVARVVVRGETATVTLEQPVLTPGGPATRDARELRVRVPGEVITSDTHLRALIQQQRVDLRFEAPHQWPGILLNVLPVILLLSWVAALLGVLVWLGWWAMRRVKVANP
>NZ_CP013910.1|WP_062159540.1|3196565_3197990_-|hypothetical-protein
MIDVATTWQQVCEALAGGDYEQAFGVLDAAMREAHRPERARLTLLLGSLHALYGDAATTDLGAALREARTIDPSLREDPLYQALMAELDARTRGPDASPPPTAAREAADPLARFHALCALVLMDEGQAALDIHLPASELPEHLRWRLRSWEAEANEGLGQTADAANLYGEAAHLARGLNRAVMLQEQAALQLQLGQAEAAKHTLDQARPLYPTRPSTHDAEDAGLNLATWHYLRAQALLNLGQPDAAHDMIREAARLEAQHGDPSYGVALVRGQVLTHLGRQQDALDAFEDALKLATDADRPYANHELGVALLDLDRPVDAREKLEAVLADPEYPYQPEVLADIAECDYRLGRLQEAQLEAEQALAQGAVIPASLVLGSVALDYFQLDEALEHYDRVIREAAPESRDWVTAHQMAADVMAQQGFPDPAAAYAHAQQALAHTPDNDDWHVTLLEHLRKAEALLSQQGGTGGRMLN
>NZ_CP013910.1|WP_062159539.1|3195246_3196377_-|YbfB/YjiJ-family-MFS-transporter
MLRLSLGGAVALGFARFAYALLLPTMREDLGWSFTLSGAMNAANALGYLLGALIAAPLIRRAGLGRVFAGAMFLTALTLLACAATGLSAPLLSLRFLSGVGGALVFVSGGGLAALATRAHPERSPLLLGVFYGGAGIGMLLSAALLPPLLAHGWRGAWLALGLAALACIPLSAPALRRLPTHAASAPARSPAVSLRPLAWTLAAYTCFGIGYIAYMTFIVAFLKGAGAQAWITPFWALLGLSVVLHPFVWAPVTARLRGARAMTAQLLTLAAGAALPLLGTSPPALLLSGALFGGSFLAVVAFTTLITRRTLPEHAWARGIAAFTVLFAAGQAAGPLLTGLLADRAGGLRLGLGVSAGVLLLGAALALGQGRGRAT
>NZ_CP013910.1|WP_062159538.1|3194318_3195227_+|GNAT-family-N-acetyltransferase
MLSPVPTLRPFRAADASAVAHLVTEGGRGHWTYTPEHFREAQPGTRPTRLVAEQGGVVVATARLAPFGEGVPDALRLDVAGDGASFTPLLLAQLAEAPGGFRRVLGVTREDFTEVMTFFHAAGFRNAWQSWGAHLDLTTFDPAPFEPLQERLFLAGYEPERLGPDAPDADWDALSDLHRTGLRDQLRNPTTTPDPLTRDGLRDVIRREEAAFVTRWRGQIVALTRLTPRGPEVDSVGTVTHPDHRARGVMTALKAHALTWAQGAGHTHAGTGGTVLNLPMLRVNTRLGYRVERMWITWEKEL
>NZ_CP013910.1|WP_062159537.1|3193434_3194325_+|GNAT-family-N-acetyltransferase
MLLRSPEPADAYAAALLLNSTQEPHFHTTSARLCTTWDRHPTRTLVVGEPGQPRGLLTLWAPEFQPTHLWIGLHLHPDHRADDTAPTLMHAARDAARAQGRTHLWLSVREDYLSTAPDLPTLGLREVHRTFGGGLHLRGWTDPTPDLRQELEARGYHFTPAQPHADDPRLHDLYARTRDHKVTAAPTIPEASPTLTGEDGLWDAAYLAWRGEALVGLSLPERSRLNAWNALLTVTHEHRRQGVGRTLLSLTARALREQSFTFLNAAGSARDVAYLRVLRQVGANIEPDWIAWETPC
>NZ_CP013910.1|WP_062159536.1|3191105_3193073_-|transketolase
MSSDIPQLSVNTIRTLSIDGVQAANSGHPGAPLGAAPMAYVVWQDYLRFNPQHPEWPGRDRFVLSAGHASMLIYSLLHLTGYDLSLDELKNFRQWGSKTPGHPEFFHTPGLDATTGPLGQGAAMTVGMAMAEAHLAARYNRPEFPIFDNHTYAILGDGDLQEGVNHEAAALAGHLRLNKLIWLHDDNQVQLDTPTSKAESDDIAARYVAYGWNVQKVADGNDLDAIRAAVKEAQTSDRPTLIQVRTVIGFASPRAGTSKAHGEPLGAEGVAETKAALGWDYPPFTVPEEVKAHMDARERGAKFEADWNALMDGYRAAHPELAAEVDAMLKRELPANLADALPSYEVGGKGVATRNASGEVINALAKVLPGLMGGSADLSGSTKTTIKDGGEMQSGSMAGRNVLFGVREFGMAAAANGLSLYGGLHPMVGTFLVFADYLKPAFRLSAIQMQPVTYVLTHDSIGLGEDGPTHQPIEQIAMLRAVPGAHVIRPADANETAAAWQMALEYDKGPTALALTRQDLPILPRNHAGVKKGAYVVRDADGAQVILIASGSEVSLALDSAEALAAEGIQARVVSMPCMEVFRTQDRSYRDSVLTPGVKRIAIEAAAKGPWYEWVGTDGAVIGMDTFGASAPASVLFEKFGFSVQNVSKVVKSVL
>NZ_CP013910.1|WP_062159535.1|3190343_3191036_+|7-cyano-7-deazaguanine-synthase-QueC
MTEGKKRAVVLLSGGLDSSTVLGMATCDGYACTALSFRYGQRHTVELERAAKVAAHFGAAHRVIDINIGSFGGSALTDENIVVPTDGTAEGVIPPTYVPGRNTVFIAVGLSLAEAIDAERVFLGINAVDYSGYPDCRPEYLAAYQTLADLATKAGLEGRGAVLTAPLAELTKADIVREALAVGVPIDVTWSCYQGGEEPCGVCDSCRIRDKALIEAGRPDLATTYAQAQL
>NZ_CP013910.1|WP_062159546.1|3202841_3204230_+|RNB-domain-containing-ribonuclease
MTLPDLTPAQRTELELLARGKQDKSRTMRDLNQPETPEAAHALLLRAGLWTDARTPYADRLGAALTPVALDVPAFAPEGRLDLTHLETFAIDDEGNRDPDDAVGIEALPGGLTRLWVHVADVAALAPADSPLDLEARARGATLYLPDRTIGMLPDALVEQAGLGLHDTSPALSISLDLDEDGNAEAVDVQLTTVRVQRLTYTQAQERLDAGEEPFATLARLAAASRELRVQEGALSIDLPEVRVKADEAGATVTPLPKPEMRVVVQECMTLAGWAAAIYADDHAIALPFATQDPPHREVRGDTLPAQWARRRTLARTRFQPAPGPHAGMGLDLYTQATSPMRRYLDLVVHQQLRAHLAGQDGLSGKEVAARVAQAQMNADATRQAERLSRKHHTLRFIAAQPEREWEAVVVDRRGPQATLLIPDLAFDLPLSTPAAPGTALRVRLGDVNLPNLTLRARVVTD
>NZ_CP013910.1|WP_062159547.1|3204413_3204683_+|hypothetical-protein
MSAASILPSDIVSLRMSHCRAEHAAREAQYHLAVLHYRTCLEAAERREDCRAVEFFALKLAGCYDQMGLNAKAASFRALAGSGDAPLLG
>NZ_CP013910.1|WP_062159548.1|3204777_3205131_+|hypothetical-protein
MTTLPLTLLRRAFLPLALLGSAHAATLDLKVGQTGKLGDATITLLRTQDSRCPMNARCIQAGDLITSVLVREGSRVRLLRLKLSDTTAQSSGLHISGATANMAGQRLPLTVTFSDGR
>NZ_CP013910.1|WP_062159549.1|3205202_3206990_+|WD40-repeat-domain-containing-protein
MRTPALILSAALALSGAASALTLSKPTVYTVPGADSHLAAFLPGGQVAVDADNAVLLLDQNLKTVRGWYSLQGSVRALSASPDGARVAALSRDRWVVWDAQTGQEVRSGKAGPDTTLGFAADGALLLLEDGTLDRLDLGSGVRTELLGDGEAYGVRVSPDGTRAAVIYDSRVDLVSLPDGKVVTSGEISDDWDGLEATFSPDGQAAVIRTGSAALILRAGQDTATEVEGGEDFSLDGSVVFLNPAQFLYAEYGEGQLFDAQTGEPVGDALELDSLDTLVGGPDGQVLSLGGSVGRLNLSALDAPARPRVTLPSANAWSGAFIGGVPHAGLGDFINLKTGKALNVGNRERLYATEAQGEQVWTLNASGTVNVYRAGKIVKVAALGSKVEYETLHTSPDGRYAAVSGYEGLALLDGQTAKVVKQFTPAQLKVKDIHDALPTPDGKAVLVIPHEGNPLRVDVATGKVQAAVNLPADASAEEFQQSRGGTLAVAYSLDDTSFVALFKPGAATPFKTLKFATAVRTLRFSPDGKLLALLTGDAQNALQVLDTASGSVLARAGQFSLRTSLLTWSASGAQLMVGAGQQGQPGSVSVYDVKR
>NZ_CP013910.1|WP_062159905.1|3207130_3207601_-|hypothetical-protein
MKGVGLTLAGLVLLSPLLSTAGALPRYRLQAAPQLHLTEGNELWELDRRVMPCTYCHVNADGGAPWNPFGQAIQATFASEAKEGRHLSFPQALYTLLQADTDADGDSYPDALEVYAKTLPGDPASRPTQSLDELRAAFTAAGGAEQFAPPKKKAGK
>NZ_CP013910.1|WP_062159550.1|3207639_3208812_-|DUF1501-domain-containing-protein
MTNRRDFLKLSALAVAATSGMPGFLARAATQAGGTKTLVVVQLTGGNDGLNTLIPYSNGAYYAARPNIAIPKKDVLTVTPDLGMHPALRPLMKLWDDGHLAWMENVGYPNPNRSHFASMAIWHTADPTQAEADGWIGRIAEKIGDPFCASNLGAATPQALQASEFSLPSIDSVDNFQLKLPGGMNTPFESLLNSPRSGEAAYLTRATRQMLKNTARVQENVKKYKAGATYPDTKFASQLRDAARLIAAGVGQRVIYVSLGGFDTHAGQRAEQDGLLGTLAGGLSAFQADLERQGLARDVIVMGFSEFGRRVAENGSAGTDHGKGSVMFAFGQGVKGGVHGSSPDLEDLSEGDIKYRQDFRGVYAEALTRWLNLDARGILGGTFTGPRWIA
>NZ_CP013910.1|WP_062159551.1|3208842_3210108_-|DUF1800-domain-containing-protein
MPLTPLSRPLTAEDAAHFLRRTAFGATDEQIRALVGQKAQDVARAALAFDQSVAPGNPFDPMQGATPGAALQLGRGAWLYELAYGPHPLREKLALTWSNHFVIATDKVRNVPAVVDYLNLLRRHAATRSFERFTLEVAQSPAMLRYLDNDQNRKGKPNENFSRELLELFTTGIGHYTENDVREGARALTGWSYQGGRGNKQYLEQPRFVNQPQQHDDGKKTYLGQSGALKGEDIVRIATSQPATATFVSRKLHRAFLADTPDDAAVQGSADTWTRTKGDVMAVLTELLASEAFYASRSRIIRSPIEFLVGGIRTLGQPKIDARSLLNLAGTAGRMGQVLLEPDTVKGWDGGREWINDTTLLLRMQVAAALTMGSKAPNLDTPPSLLALTGQERPAGAVLLSSLKGRQRTYLSLISPEFQLA
>NZ_CP013910.1|WP_082689218.1|3210153_3210903_-|transcriptional-regulator
MLLLTLGTAHAGDLEDVQAALKQARAQVARGQAEVTVLFPPRATPTRAAAQLPALTVRPALLAKNFSVTRTGTERVAGRDAARFTLTPKVGDAARWTLWVDLTWNLPLAFEERGADGTLARRAALTRVQPAPARVTRPAPPAAPAGLRAALTRALPGLGLPPGFTPVAVQPRGQGLEVALTDGLNGLTLVVAPQDVKAAPGVASRRVGKVFVWLVGNLPQPTLQAALARVRSATPDPLGTFSAPADSNP
>NZ_CP013910.1|WP_062159552.1|3210917_3211208_-|hypothetical-protein
MTHHDPSEYTDEHDDLDTLLAQARQLTPADLGAADRFLTRRRAARTRHRAGWLTGALASAALVAGLTVLRPAAQLPGPLPSSAAYDAYQSAWGADW
>NZ_CP013910.1|WP_082689219.1|3211204_3211672_-|RNA-polymerase-sigma-factor
MRTHAPQVHRLAASLVGPGAADDIVQEVFIAAHRALKGFRGEASLSTWLHRITLNACHRALGARQAVPLEDTPEPHAPHDPARAGERAQVRERLARALAQLPPDQREAVALRELSGLDYAEIAALTGAELGTVKSRINRGRAALRALLTRAGVTP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	91565-91593	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	17660-17688	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	72566-72594	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	222383-222411	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	332162-332190	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	407091-407119	5	0.828
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	664650-664678	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	715528-715556	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	89123-89151	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	MN096358	Microbacterium phage LeeroyJenkins, complete genome	31206-31234	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	MN096357	Microbacterium phage WaterT, complete genome	30067-30095	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	MT818426	Microbacterium phage Lifes, complete genome	27978-28006	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	239557-239585	6	0.793
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	221895-221923	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	101386-101414	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_008758	Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete sequence	53230-53258	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	435332-435360	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	464282-464310	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	481413-481441	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	MK305888	Streptomyces phage Austintatious, complete genome	24060-24088	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_047792	Streptomyces phage Ididsumtinwong, complete genome	26361-26389	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	MF042361	Pseudomonas phage Skulduggery, complete genome	55852-55880	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	615377-615405	7	0.759
NZ_CP013910_4	4.3\|3202093\|29\|NZ_CP013910\|CRT	3202093-3202121	29	NC_019307	Streptomyces sp. W75 plasmid pCQ4, complete sequence	38129-38157	7	0.759
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1904991-1905019	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1803587-1803615	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1873791-1873819	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1802607-1802635	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1803597-1803625	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1802981-1803009	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1803567-1803595	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1905182-1905210	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1905179-1905207	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1905143-1905171	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	926148-926176	8	0.724
NZ_CP013910_4	4.1\|3201988\|29\|NZ_CP013910\|CRT	3201988-3202016	29	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	886979-887007	8	0.724

1. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ccgccattcagggtggcggtgccggtcac	Protospacer
*.* *.*************.********

2. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ccgccgttcagggcggcggtgccggtcac	Protospacer
*.* *********.*****.********

3. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ccgccgttcagggcggcggtgccggtcac	Protospacer
*.* *********.*****.********

4. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ccgccgttcagggcggcggtgccggtcac	Protospacer
*.* *********.*****.********

5. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcg--ccggtcag	CRISPR spacer
ctggggttcagggtggcggcgatccagac--	Protospacer
**** ****************  **.* *

6. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.828

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ccggcgttcagggtgacggcggcggcccg	Protospacer
*.*************.***** ***.* *

7. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gccgcgttcggggtggcggcgacggtcac	Protospacer
 . ******.*********** ******

8. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gggctgcgcagggtggcggcgccggtcag	Protospacer
  * .*. *********************

9. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgggcgatcagggtggcggcgacggtgaa	Protospacer
. **** ************** **** *.

10. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to MN096358 (Microbacterium phage LeeroyJenkins, complete genome) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gaggcgtccagggtggcggtgccggtggg	Protospacer
  *****.***********.****** .*

11. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to MN096357 (Microbacterium phage WaterT, complete genome) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gaggcgtccagggtggcggtgccggtggg	Protospacer
  *****.***********.****** .*

12. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to MT818426 (Microbacterium phage Lifes, complete genome) position: , mismatch: 6, identity: 0.793

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gaggcgtccagggtggcggtgccggtggg	Protospacer
  *****.***********.****** .*

13. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 6, identity: 0.793

ctggcg-ttcagggtggcggcgccggtcag	CRISPR spacer
-ggatgcttcacggtggcggcgacggtcag	Protospacer
  *..* **** ********** *******

14. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tcagcgtgcagggtggcggccccggtcca	Protospacer
...**** ************ ****** .

15. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ggacccgtcagggtgccggcgccggtcag	Protospacer
  . *  ******** *************

16. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_008758 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tcggcctccagggtggcggcgccggggcg	Protospacer
..*** *.*****************   *

17. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ttggcgatcagggtggcggcgtcgatgtc	Protospacer
.***** **************.**.*

18. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ttcccgttcagggtgatggcgccggtcgt	Protospacer
.*  ***********..**********.

19. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tcggcgttcagggtggcgacgtcggccgt	Protospacer
..****************.**.***.*.

20. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to MK305888 (Streptomyces phage Austintatious, complete genome) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
taggcgttcagggtggcgacgtcggcctc	Protospacer
. ****************.**.***.*

21. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_047792 (Streptomyces phage Ididsumtinwong, complete genome) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
taggcgttcagggtggcgacgtcggcctc	Protospacer
. ****************.**.***.*

22. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to MF042361 (Pseudomonas phage Skulduggery, complete genome) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
attgcgtccagggttgcggcgccggtttc	Protospacer
 * ****.****** ***********.

23. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 7, identity: 0.759

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
ttggcgatcagggtggcggcgtcgatgtc	Protospacer
.***** **************.**.*

24. spacer 4.3|3202093|29|NZ_CP013910|CRT matches to NC_019307 (Streptomyces sp. W75 plasmid pCQ4, complete sequence) position: , mismatch: 7, identity: 0.759

tcggcgtggaggctgtgggcgcggcccat	CRISPR spacer
cgggcgcggaggctgcgggcgcggccacg	Protospacer
. ****.********.**********

25. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

26. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

27. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

28. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

29. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

30. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

31. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

32. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

33. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

34. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
tgcgcgttcagggacgcggcgccggtata	Protospacer
.  **********  ***********  .

35. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gtggtgttgagggtggcggcgccgccggc	Protospacer
 ***.*** *************** . .

36. spacer 4.1|3201988|29|NZ_CP013910|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.724

ctggcgttcagggtggcggcgccggtcag	CRISPR spacer
gtggtgttgagggtggcggcgccgccggc	Protospacer
 ***.*** *************** . .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage