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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013921 Lacticaseibacillus paracasei strain KL1 chromosome, complete genome 3 crisprs csa3,DEDDh,DinG,WYL,cas3 0 0 12 0

Results visualization

1. NZ_CP013921
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013921_1 577648-577765 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013921_2 1736765-1736872 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013921_3 1816664-1816772 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 68570 : 146640 91 Lactobacillus_phage(75.44%) tRNA,tail,protease,integrase,capsid,holin,terminase,portal,head attL 65539:65556|attR 99778:99795
DBSCAN-SWA_2 169240 : 229110 49 Bacillus_phage(25.0%) tRNA,bacteriocin,transposase NA
DBSCAN-SWA_3 341180 : 398030 42 Faecalibacterium_phage(18.18%) protease,tRNA,transposase NA
DBSCAN-SWA_4 511504 : 563859 62 Lactobacillus_phage(71.43%) tRNA,tail,protease,capsid,holin,transposase,portal NA
DBSCAN-SWA_5 1443997 : 1453340 8 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1646300 : 1702079 57 Streptococcus_phage(23.08%) tRNA,tail,integrase,capsid,transposase,head attL 1699740:1699799|attR 1703121:1704004
DBSCAN-SWA_7 1816897 : 1913214 86 Lactobacillus_phage(53.12%) integrase,transposase attL 1859930:1859949|attR 1912102:1912121
DBSCAN-SWA_8 1949804 : 2002912 44 unidentified_phage(25.0%) holin,transposase NA
DBSCAN-SWA_9 2155658 : 2177579 21 unidentified_phage(50.0%) transposase NA
DBSCAN-SWA_10 2209893 : 2391728 162 Lactobacillus_phage(19.05%) tRNA,protease,holin,bacteriocin,transposase NA
DBSCAN-SWA_11 2506327 : 2564375 56 Lactobacillus_phage(40.0%) transposase NA
DBSCAN-SWA_12 2811786 : 2895019 82 unidentified_phage(36.84%) protease,tRNA,bacteriocin,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage