CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014343	Pseudomonas putida strain 1A00316, complete genome	2 crisprs	DEDDh,csa3,cas3,DinG,WYL	0	1	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014343_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014343_1

4011280-4011375

Orphan

Consensus_repeat	Method
GAAAAATAAATCTGTCCCCTTTTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014343_1

>merge|NZ_CP014343|1|4011280-4011375|CRISPRCasFinder
GAAAAATAAATCTGTCCCCTTTTCCCAGTCCCCTTTTCCCACTTCGCTGCCAGGAGCCGGAATTAGAGTAGGAAAAATAAATCTGTCCCCTTTCCT

>NZ_CP014343|1|1|4011280-4011375|CRISPRCasFinder
GAAAAATAAATCTGTCCCCTTTTCC	CAGTCCCCTTTTCCCACTTCGCTGCCAGGAGCCGGAATTAGAGTAG
GAAAAATAAATCTGTCCCCTTTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014343.1\|WP_155721679.1\|4029553_4029724_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_081100322.1\|4012343_4012622_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379730
NZ_CP014343.1\|WP_143514931.1\|4004840_4005131_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_155721677.1\|4008587_4008914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_143514929.1\|4027831_4028953_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226646
NZ_CP014343.1\|WP_062574722.1\|4011450_4012083_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_062360725.1\|4005210_4005543_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_051555768.1\|4002533_4003394_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP014343.1\|WP_062574726.1\|4026199_4026637_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP014343.1\|WP_081100393.1\|4007322_4007679_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP014343.1\|WP_062574721.1\|4009837_4010470_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_062574723.1\|4012621_4023271_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377410
NZ_CP014343.1\|WP_062574727.1\|4026658_4027804_-\|cupin	unknown	unknown	gnl\|CDD\|372651
NZ_CP014343.1\|WP_062574720.1\|4008973_4009666_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP014343.1\|WP_028692819.1\|4003740_4004124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_155721678.1\|4029070_4029226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_155721676.1\|4007919_4008180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014343.1\|WP_062574724.1\|4023327_4025022_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP014343.1\|WP_062574725.1\|4025166_4026066_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP014343.1\|WP_062574718.1\|4005750_4007304_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980

Protein	Function_ID	Function_description	E-value
NZ_CP014343.1\|WP_081100393.1\|4007322_4007679_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.28978e-42
NZ_CP014343.1\|WP_062574724.1\|4023327_4025022_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	7.36728e-143
NZ_CP014343.1\|WP_062574723.1\|4012621_4023271_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|377410	pfam04830, DUF637, Possible hemagglutinin (DUF637). This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.	2.52226e-38
NZ_CP014343.1\|WP_081100322.1\|4012343_4012622_-\|hypothetical-protein	gnl\|CDD\|379730	pfam15567, Imm35, Immunity protein 35. A predicted immunity protein with an alpha+beta fold and a conserved tryptophan residue. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, usually containing a protease domain such as Tox-PL1 and Ntox40. In some instances, it is also fused to a papain-like toxin, ADP-ribosyl glycohydrolase and a S8-like peptidase. Based on these associations the domain is likely to be a protease inhibitor.	5.62199e-15
NZ_CP014343.1\|WP_062574720.1\|4008973_4009666_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.81308e-16
NZ_CP014343.1\|WP_062574725.1\|4025166_4026066_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.6193e-08
NZ_CP014343.1\|WP_143514929.1\|4027831_4028953_-\|hypothetical-protein	gnl\|CDD\|226646	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].	7.32919e-94
NZ_CP014343.1\|WP_062574727.1\|4026658_4027804_-\|cupin	gnl\|CDD\|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	2.53929e-31
NZ_CP014343.1\|WP_051555768.1\|4002533_4003394_+\|hypothetical-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.05992e-88
NZ_CP014343.1\|WP_062574726.1\|4026199_4026637_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.29474e-33
NZ_CP014343.1\|WP_062574718.1\|4005750_4007304_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.26983e-127

>NZ_CP014343.1|WP_062574721.1|4009837_4010470_-|hypothetical-protein
MEPKTYELLNHIPKHADYAVSAGDLDPEDIPQDRIDAVLDLLRHANNDEEHFLAAKLLTSWGIHEGLIALEGRMDKPGGIEGVYFHRLHGYDDTYHQILLAVTRYFVNVADRGDIEAARVQIYFPLSKIIALANSEPFEIAKIFDFASSENYSEYVPLVEKHLVAIIDHPEIHRWKIYNAIEFLMVFNPGFVAFLLKEKNKTIDDFRPVT
>NZ_CP014343.1|WP_062574720.1|4008973_4009666_-|transposase
MPRGGRVLLPHCPHHIVHRGHNRQVVFAQDTDFQRYLADLRELKDAFGVKVYAYCLMTNHVHLLLVPDDACAGLSQLMKTLAARATRYRNRLEGRSGTLWESRFKSSIVQSDTYLLACCRYIELNPVRARMVAEVGDYPWSSYSARMGAVKRQNWLDEDPLFEALGETEELRRKRYAEFVRQAISDEELSLIRDTIQRGQLTGSSRFVDEIAQITGKRIERRKQGRPKLE
>NZ_CP014343.1|WP_155721677.1|4008587_4008914_-|hypothetical-protein
MYCAMLWSKERAAAGLDGVLKVIEIPKDAIPMLINADSKNYPLLSELCLDDYGLYSGEQLERLRLELKNMSRATNGMDGFFCSLDDLALEARVLGESVLFDPFRDLSS
>NZ_CP014343.1|WP_155721676.1|4007919_4008180_-|hypothetical-protein
MAKFLCRCSHVISLVSSPVSEEFTLVPNKLLYELAERADKGRIPFDEFFDRIDVVGKDVITCPACGRVWIRKDEGAGYWPYLEEKE
>NZ_CP014343.1|WP_081100393.1|4007322_4007679_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVLFVFLNKPRNRVKILYWERNGFCLWLKRLESERFKTSPEITDEAIVLTVQELNWLLDGFDLWRNRPHQVLTPRFVA
>NZ_CP014343.1|WP_062574718.1|4005750_4007304_-|IS66-family-transposase
MNSMPDDLPDDPVLLKQMLLEAYAARSREQEVKEAYATHIVDLKEQIKLLRDRLFGRKSEQAIDPNTPQLAMFNEAESEPLLTVETPDEEVVTPAPRRGKRKPLSADLPRIEVIHELPEHELTCACGCRKHEIGEEISEQLDIVPMQIRVLKHVRKVYGCRGCEVAPITADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHCFESVLSRHGIDIPRQTLARWIIQCSEHVQPLLNLMRERLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVKVSGPPDRKIVLFDYSSSRAQEVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHARRKFVDAQKVQPKGKTGRADVALAMINKLYGIERELKDASDEQRYVARQAQSLPVLTQLKSWLDKAQSQVTPQSVLGKAVNYLANNWSRLVRYVEAGYLPIDNNLAERSIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKINGQEPYTWLRHVLERLPHAQSVADYEALLPWNCSPEMPR
>NZ_CP014343.1|WP_062360725.1|4005210_4005543_-|hypothetical-protein
MTSVSELNELLVANNCLHFMSIQLDENGMAYDLSLSISASEKAGADVVCISFIDVSQLASREFGGGLTQLMHMSVKKLDSGLDRIRYQFCDHEDGKLSFYFSSFSVDCVE
>NZ_CP014343.1|WP_143514931.1|4004840_4005131_-|hypothetical-protein
MMTISWFNECISPFLEGCSLEYSSCSGGDFGDLERIELEGFGKLGAVEFWSKGWIGVDIYDCVLEEQAMNVLFSPEEQGSVRQAFESLIEIFTQNV
>NZ_CP014343.1|WP_028692819.1|4003740_4004124_+|hypothetical-protein
MLVTVAVIYCLLITSKIAYWLVGEGWEMARVGDFAMIMLAPPALSCILLVTSSVLLYRRSAKSVWFLLGALLFGLTLIPLMFPEIFRLPASLYPQAFWYVLPGTLQAMLLVAVWIYSLRMRQNGYLK
>NZ_CP014343.1|WP_051555768.1|4002533_4003394_+|hypothetical-protein
MTRSQDNPSVQELFLSELVAEPNRYHLYISHACPFSHRVHLVQSLLGLEDALDVTSVAARRHDQGWEFDEHDQDPLHKDVTLLSSLYERSRPGFTGNQSVPVLWDRQQNRIVHNDSAELALQMATRLLPLAKTPIDLVPDRSSCDIVELNQWLHTNINRMVYHMGFAPDQESYDQAFQQFFAAMDTLEHRLRKQPYLVGGKLSLSDLFLLPTLIRYEAVYYVHFKTNHKTLAEYPALYQYLVRLTQIPAIYRTIDMAHIKLHYYYSHNHINPTRIVPQGPALSWLN
>NZ_CP014343.1|WP_062574722.1|4011450_4012083_-|hypothetical-protein
MGPKTYELLNHIPKHADYAVSAGDLDPEDIPLDRIDAVLDLLRHANSNEEHFLAAKLLTSWGIHEGLIALEGRMDKSGGIEGVYFHRLHGYDDTYHQILLAVTRYFTNVADRGDIEAARVQIYSPLSKIIALANSEPFEIAKIFDFASSENYSEYVPLVEKHLVAIIDHPEIHRWKIYDAIEFLMVFNPGFVVSLLKEKNKTIDDFRPVA
>NZ_CP014343.1|WP_081100322.1|4012343_4012622_-|hypothetical-protein
MISFEESLEMVINHLSKSPMPLVITYSEGFPDGWLFCFNSKQYVETGDFSFQLVGNGPIFVDKDTGELHFFGTALPPKEYVEEYSLRKRDKK
>NZ_CP014343.1|WP_062574723.1|4012621_4023271_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MDIRTPLNQCIALIVAGVLFLNPIVATAAQLTVDAAANANTSIKQAGNGVPIVNIATPNGSGLSTNTFRDYNVGSNGLILNNATSKTQSTQLGGIIIGNPNLRGQAAQVILNQVTGGNRSTLQGYTEVAGQAARVIVANPHGITCKGCGFINTPRATLTTGKPIMDGERLDRFQVDGGDIAIEGDALNATNLDQFDLITRSAKLNTELHAKQLNVVTGRNDVKADTLQATPRGDEGGDKPLLAIDSSALGGMYANTIRLVGTEQGVGVKLAGNMAATTGDIQVDANGKVTLAQTSSAGNLTVAAQSAELTGKTYAAGNATVRVRDDVTVGQSLAARDSITVAGARIDNQGVIEAGVEPDNTRNAHGDVTLTGQTLRNRGSVVANRTLEATGSTTLDNQGGTFKGRATTLTAGQLDNRQGQVLADDTLTVNAHAIDNRDQGLLQGKGQAVVDVSATLDNRGGRLVGQGGLQVTATQLDNRDKGLVGSDRQAKLTTHALLDNQDGGKLSADRLDISTAGLLNGGGQLLGGDVLINASADIDNRLGLVSAKRLLDLKAVGLDNSGKGNLRSDGTLGVKVATLDNRDNGLLSSLSDLTLHGERLDNRGGLVLADRSLTVTGGHFDNRDKGAATTKGKAHIDVASLSNSDAGHLQSDGRLDLIAGTVDNQRLGNITAKGDLEAHLGTLNHQGGKLTSLSSLLLTADTIDNQQGGKIGATTVADISAARILNQQGEISSAGKVVLNASELLDNQGGKVIGDRGLALTVQRLLNQNKGLLSGHDRLSLHGTELLNNGGKLSSRQHIDVTLDGKLDNSDAGLIVSDATVTLNAGTLHNRQGGKVSANTALDLTSQGLLDNQGGTLVTNTGLLLKAGRLDNSHLGVISAQDHAELRSGAIDNSAKGNIGAGSLLLVGTQLDNNTYGRISATGQIDATLTGLDQNDHGQLVSETGIDLDLQHGQLVNRNGGLLRSPGSLLLRQIGVVDNRETGEISSNHGFSLVANKLDNRGGRVISAQDLTLRIAGVLDNSLQGVLSASHDLTVEATRLDNYTGGSLASGQALKATIGGQLDNHDQGILSAVGALTVTSAGLLNSERGLLSGNTGVTVTTGQLDNHQGGQLISQAAMTVDSGELDNRGGALSSKQAMKLTTSELRNGADALLRGGRIHSDGALTLVAGQVDSSQGGEISAKGDLLLRVSELIQRQGRLIGEQKLDLDLNGGDLLNQGGLISANGPLNIQHLGKLDNSAGEVTSQQSYSLLAQRLDNQQGRILSDGRLTVEAPLLDNSGKGLISGAQGLLAKGIDLNNSGEGTLSSKDGDLTVTLDGTLDNRELGALVSKGNQQITAANLHNSKGIISSEQAITLSVTDRLDNSGGGLISATGDLAFDQAGTVIDNQGGQINGQAITVVGKRLENAKGQLTSRALLDLTLTGALLNTDGARLVSGADLLLKAGSIANNGGKLISHGLLRVDSATLDNSRGGNLASQQNLVLRLSGDLLNGQDGLLFSEHGKLDIHANALDNQAGTLKSQGGIDVRLDKALNNHGGRLESQAGDLELHAASLDNGGNGMLSAVKGLFKGVFAGLFDNGGGTTQAQSVDIKADTRVNNQGGYLSALGGDNQLDTAEFDNRGGGLYAAGLLHLQGQQLLNQSGKIGAGHIDFGLSGALYNGLGQLESESDLLLRASELDNRAGNLRALGKTGTSRFIVTGNLLNDNGVLATANHDLDLQIGGLSNSGGQLLHTGLGTFGLASDKVTQAGGVLHTDGLLSIGAASWTNDSVLQARRLELDIGRFVQTASGKLLAVESFKGRGGDWTNHGLLASDGSLQLDLTGNYDGNGRLSSLGGLGLSATDIRLSSAASLAGGAGSVVTARNLLSNDGRLTALGGLTVNAASLENRGTLGGAAAVTLAANTLSNQRGLVFSGNDMTLRVGSLSNYYGDIYSLGGLDLAGNGSARAALLDNISASMESAGSMTLAVDTLLNRKEHLSSKQKLVAGYVNVYSDDRCKGKGCELYFSATESWQDVIDQDSPTAFITSGGKLTFAGNAFRNHYSSVSAGSDIAINTAVFENKGAGGGEQRNLTASMYTRDRGQYNAFINAKNQFNQNPGSLTLDQVMAASGYPYASIYDVIDNKTPIAGAVVAPAVVQSAGAVTINATQRIDNSVVRVNQAGAGTINARGDATADARQAQTQVRALNPQLPPDLAQRQVNPVTLPSFSLPQGSNGLFRISSQAGQAAISGDALGATGDRTQAGSGTFIAPLASTASADSRAAQTLGASGAAAAQGAVAGSGVALGGLAAGVKLVQGVPERSVPNVSHKYLVETNPVLTDLKQFLSSDYMLGQLNIKPDQAIKRLGDGLYEQRLIREAVVARTGQRYIDGMTSDETLFRYLMDNAIASKDKLSLSVGVSLSAEQVAALTHDIVWMEQVEVNGEKVLAPVLYLAHANGRVAPNGALIQGRDVNLISGGELVNVGTLRATNNLAVSATNIGNAGLMEAGGRLDMLATESIRNAQGGIIAGREVSLTALTGDVINERSVTRLEGRAGGEHVTKDLVDTAARIEAANNLTITAGQDIGIVGGAVQAGGNIDMDAGRDLIIASQEGVDSHEYQRRRVSGHDTSITQYGSEVKAGGNLTATAGQDLSIVASEIEARRDLALQAGRDVTLAAAANEEHSYAKGKKGKTKYERQEDDVEQQSAEVKAGGDLTIDAGRDLRMVASKASAGDEAYLVAGDKLELLAANDSQYSLYDMNKKGGWGSKKTQRDEVTDVKAVGSEVTSGGDLTLESGGDQLYQGAKLASGADLTIDSGGSVTFEAVKDMHQESHEKSKSNAGWFSMKGEGRTDETVRQSELVAKGDLVINAVGKIHVDVRQVNQQTVSESIDAMVKADPKLAWLKQVEAQGGVDWRQVKEIHDSFKYSNSGLGPAAQLAIAIVMAAVVGPAAAAWAGGGVTGAAVGAVATGASTNASVSVINNRGNLGAVVKDVTSSDAMKGYVISGVTAGLTAAYFDGWTGTKTDIATGKVIGPKLYTLKGVGQFAANQTLQNGTSMLLSKALGQGGSASEALKGALFNTLAAASFNAVGDYTHKWGIENGSLPKIAIHAMVGGLLSKATGGDFKTGALAAGANEALVVELNKLADGNESLLTMSSQIVGVLAAASQEDANAASLNKAAWVAKNGTQYNFLGDHSAKQRDEARDSFRKDGGLKAARELVKLEGADQRSDKLLEAYKRDPSSLTQDDMAELTAYLQVYAFERLDAVRKQDVVKGLDANHSLAVTRASVASLLGGEQTLGYGYPYAGTSQDKIAWADAQSGQMGLLESLAWTRDRSVNEQTYLDAKGKLRIGDEQQGLANLGDPAIYFLTGPIGSTIRAVAATNGALQFTQGAKQAVEGDGWNAAGNMVAGLLGMGTLGIPAVKGGAGVASDAKPVGGAKGTGGAVEETAGSIKNVNPGFPEAGRTHNCVNCSIATDATLAGNPASALPIKSTDGVSITVLEKQFGTRFVSVSSADNISQKMIGIGSGARGIVYGSYGPGQPGHVFNVVNQNGTIRFLDGQTGKVADLSKFTSFKFLRTN
>NZ_CP014343.1|WP_062574724.1|4023327_4025022_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MPLPTRFLAAGLVLLPLLAGAAPFQTPGDRDLIRDRQENLLQEQRKRLEELQQLPGRQAPQAPAQPTEQGRCFQIQRIDLQGASLLDEPQRKALLEGYEGKCLQVGQLNDLLKRITDHYLNRGYLTTRAYLPQQDLGSGVLQIIIVEGRLEGLDGSALASPREMAMAFPGNTGEVLNLRDMEQMVDQLGRLPSRQVEVELIPGQEVGGSRVQLKGQRDKPWRVSASRHNNGDASSGEQQMNLGLEWDSPLGLADQLSLRGGRDVVSDHWRHSDSHGLNYSLPWGWWTFNYSYNHNYYRTRDTSSGFPFKLDGDNSVHQFQAERVIHRDSLSKTAVNAGVSHLRARNYLDDTLIDVSSTRITERQLGVNHGRRIGNAFVNLDAGWQQGIGALDAQGAGDPRGNEPVARYNKYTLTLSYLQPFQLWGEQFSFDSLATGQRSEDALYSGQRISVGGLTSVRGFKEQTLTGDSGGYWRNQLRWRRPVTWAPLQPWLREYGMAFAYDAGVIKGQHGNGQDHGRLSGNAFEFNVRGQYFAASATFARSLERPDVITRREHPIYFRVDAFF
>NZ_CP014343.1|WP_062574725.1|4025166_4026066_-|DMT-family-transporter
MDNSLRRGSLEMIAAMLISGTIGWFVLVSGQPVLEVVFWRCVFGAGTLLLICAAMGFLKPGVLTRVTFLLAVASGVAIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLAALFLGEKITVAKLTWLSVAFLGMLAIVSAHGAGQASGGEYLQGIALALGAAFLYAVAALIIKRLTGTPPHLIALIQVSTGVLLLAPWVQLGGLPGELPALGSLVTLGILHTGLMYVLLYSAIQRLPTALTGALSFIYPIAAILVDWLAFDHRLAALQWLGVGLILLAAAGMQQGWWFRPAGKPARQQ
>NZ_CP014343.1|WP_062574726.1|4026199_4026637_+|Lrp/AsnC-family-transcriptional-regulator
MTDTIDQLLINALMEDSRRSLKALAQISGLSAPSVSERLRRLEERGVLRGYTVEVDPRCFGYQLQAIVRIRPLPGQLQEVERQIVAIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDRLNVLAETNTAIIKKTPVKRRLPPMD
>NZ_CP014343.1|WP_062574727.1|4026658_4027804_-|cupin
MLVQSALSSLFARANEVGVAGTFQFVFSGQQHFWVRAPACTQVHTGMHPQADVTIAMDTSVFLAIMQGQSDIEALFAQGRLKIDGRLGLATLLPRLVSRALHGGDSVGVEMDCRYPAQPRFSEQLSARLDMRGGIERRAARQLSLHEFTTRYRALGKPLVLSSALDDWPLAKMSMGQALEHFADVQGISRHGYYADHAFSSGREFKATRVVDFVAGMEPADQPASDEPAAYMGNNQLPRQWLHLIQFPEWFERSQYIAPRFWLGPKGTLTPLHRDDSDNLFAQVWGEKLILLAAPHHREALGSWATSPDGGLEGCDFNPDKPNWEDFPTARNVEFLPVQLGPGDLLFLPEGWFHQVTSLSTSLSINFWTRSVRVPAEVCVG
>NZ_CP014343.1|WP_143514929.1|4027831_4028953_-|hypothetical-protein
MMSMNSKIASGNDSVPEDASFLRKTFCLVSLYWKGEEKLFAWCSLAALAVLSLLAVATALAINEWYKHFYNAIQALDAYSFYRLVLVFVAIVLLSVMRSVLITYWVDVFALRWRRWLTNHYLSAWVVESNRPDQIEQQVDNPDQRIAEDINKFTFETIDLACGLFYTLASVVSFSVVLISISGSAQLWGLSIPAYMFWAAIFYALLGTFISQKIGFKLVSLSNNQQRSEADLRYFLIRFRDHSCEQEDPSGRNGEKDRISEKLDVSLANMRRTIRVKMRLSLFTESYSQLSLVFSSLLAVPRFFSGAIQFGDVMQINSAFGNLCENLSWFINAYHRLADWKATTDRLISFDGALAERSEMEGVTRGHGTVLAK
>NZ_CP014343.1|WP_155721678.1|4029070_4029226_-|hypothetical-protein
MNAFGAMVVIILIGIAVGTAADYWMLDKFIKYALMSVVITLSLRVLRGSKL
>NZ_CP014343.1|WP_155721679.1|4029553_4029724_-|hypothetical-protein
MDLLSALLLAVIFKKVAGLLKGRFGWNTDSVLGLVSVPVIYLFIYFVVHPSLSKWF

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Crispr_ID: NZ_CP014343_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014343_2

4133079-4133182

Orphan

Consensus_repeat	Method
ACTGCACCGATCAGCGCCTCGTCCTGCCCCCCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014343_2

>merge|NZ_CP014343|2|4133079-4133182|CRISPRCasFinder
ACTGCACCGATCAGCGCCTCGTCCTGCCCCCCAGCTCCCCTGTATCCCAAAACCAGATACTCCACGAGTACTGCACCGATCAGCGCCTTGTCCTGCCCCCCAGC

>NZ_CP014343|2|2|4133079-4133182|CRISPRCasFinder
ACTGCACCGATCAGCGCCTCGTCCTGCCCCCCAGC	TCCCCTGTATCCCAAAACCAGATACTCCACGAGT
ACTGCACCGATCAGCGCCTTGTCCTGCCCCCCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014343.1\|WP_062574779.1\|4130988_4131345_+\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|234845
NZ_CP014343.1\|WP_023630669.1\|4127923_4128178_+\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321
NZ_CP014343.1\|WP_062574785.1\|4144870_4145935_-\|pseudouridine-synthase	unknown	unknown	gnl\|CDD\|182659
NZ_CP014343.1\|WP_062360651.1\|4130161_4130950_+\|phenylalanine-4-monooxygenase	unknown	unknown	gnl\|CDD\|237020
NZ_CP014343.1\|WP_062574782.1\|4138673_4141691_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP014343.1\|WP_062574777.1\|4123458_4124148_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226670
NZ_CP014343.1\|WP_050706738.1\|4124239_4125025_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270421
NZ_CP014343.1\|WP_062574776.1\|4122763_4123462_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226634
NZ_CP014343.1\|WP_023630946.1\|4121976_4122741_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226961
NZ_CP014343.1\|WP_062574783.1\|4141843_4142725_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP014343.1\|WP_062574789.1\|4149280_4149877_+\|septation-protein-A	unknown	unknown	gnl\|CDD\|234704
NZ_CP014343.1\|WP_062575760.1\|4147709_4148339_-\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|183245
NZ_CP014343.1\|WP_062574778.1\|4128345_4129905_-\|sigma-54-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225821
NZ_CP014343.1\|WP_028691072.1\|4125555_4127517_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP014343.1\|WP_062574784.1\|4142797_4144216_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182324
NZ_CP014343.1\|WP_062574787.1\|4146885_4147713_-\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|224273
NZ_CP014343.1\|WP_062574780.1\|4131344_4132538_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP014343.1\|WP_062574781.1\|4133295_4138545_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373059
NZ_CP014343.1\|WP_062574786.1\|4146109_4146871_-\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
NZ_CP014343.1\|WP_062574788.1\|4148352_4149213_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686

Protein	Function_ID	Function_description	E-value
NZ_CP014343.1\|WP_062574779.1\|4130988_4131345_+\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	3.20179e-45
NZ_CP014343.1\|WP_023630669.1\|4127923_4128178_+\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	4.35503e-36
NZ_CP014343.1\|WP_062574785.1\|4144870_4145935_-\|pseudouridine-synthase	gnl\|CDD\|182659	PRK10700, PRK10700, 23S rRNA pseudouridine(2605) synthase RluB.	2.23744e-101
NZ_CP014343.1\|WP_062360651.1\|4130161_4130950_+\|phenylalanine-4-monooxygenase	gnl\|CDD\|237020	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed.	2.12869e-158
NZ_CP014343.1\|WP_062574782.1\|4138673_4141691_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.10836e-89
NZ_CP014343.1\|WP_062574777.1\|4123458_4124148_-\|ABC-transporter-permease	gnl\|CDD\|226670	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism].	1.30393e-97
NZ_CP014343.1\|WP_050706738.1\|4124239_4125025_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.12434e-128
NZ_CP014343.1\|WP_062574776.1\|4122763_4123462_-\|ABC-transporter-permease	gnl\|CDD\|226634	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism].	8.81185e-105
NZ_CP014343.1\|WP_023630946.1\|4121976_4122741_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226961	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism].	4.75292e-170
NZ_CP014343.1\|WP_062574783.1\|4141843_4142725_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	4.87682e-74
NZ_CP014343.1\|WP_062574789.1\|4149280_4149877_+\|septation-protein-A	gnl\|CDD\|234704	PRK00259, PRK00259, intracellular septation protein A; Reviewed.	1.00884e-81
NZ_CP014343.1\|WP_062575760.1\|4147709_4148339_-\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|183245	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase.	8.40334e-99
NZ_CP014343.1\|WP_062574778.1\|4128345_4129905_-\|sigma-54-dependent-transcriptional-regulator	gnl\|CDD\|225821	COG3283, TyrR, Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism].	0
NZ_CP014343.1\|WP_028691072.1\|4125555_4127517_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP014343.1\|WP_062574784.1\|4142797_4144216_-\|amino-acid-permease	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NZ_CP014343.1\|WP_062574787.1\|4146885_4147713_-\|segregation/condensation-protein-A	gnl\|CDD\|224273	COG1354, scpA, Rec8/ScpA/Scc1-like protein (kleisin family) [Replication, recombination, and repair].	2.61797e-66
NZ_CP014343.1\|WP_062574780.1\|4131344_4132538_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP014343.1\|WP_062574781.1\|4133295_4138545_+\|hypothetical-protein	gnl\|CDD\|373059	pfam14424, Toxin-deaminase, The BURPS668_1122 family of deaminases. A member of the nucleic acid/nucleotide deaminase superfamily prototyped by Burkholderia BURPS668_1122. Members of this family are found as toxins in polymorphic toxin systems in a wide range of bacteria and in the eukaryote Perkinsus. Members of this family typically possess a DxE catalytic motif in Helix-2 of the core fold instead of the more common C[H]xE motif. The Perkinsus versions are predicted to be inactive.	6.56936e-13
NZ_CP014343.1\|WP_062574786.1\|4146109_4146871_-\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	6.34073e-57
NZ_CP014343.1\|WP_062574788.1\|4148352_4149213_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.20486e-70

>NZ_CP014343.1|WP_062574780.1|4131344_4132538_+|aspartate/tyrosine/aromatic-aminotransferase
MHFAAIGRVPGDPILGLMEAYAHDANPAKFDLGVGVFKDAQGLTPIPAAVKQAEQRLVERQATKSYIGGHGDAAFGRLVSELVLGSDSPLLASQRAGATQTPGGTGALRLAAEFIAHCLPGRGIWLSDPTWPIHETIFAGAGLTVSHYPYVGKDNRLNVDGMLAALEQAAQGDVVLLHACCHNPTGFDLGQDDWRAVLDIVKRRNLLPLIDFAYQGFGDGLEEDAWALRLFAAELPELLVTSSCSKNFGLYRDRTGALLVCSHDAEKLLDVRSQLAFIARNLWSTPPDHGAAVVAEILGDPALKALWVEEVNAMRQRIAELRQGLVQALAPHGLAERFAHIAAQRGMFSYTGLNPEQVRLLRERHSVYMVGTGRANIAGADARRLEQLAAAIADVCR
>NZ_CP014343.1|WP_062574779.1|4130988_4131345_+|4a-hydroxytetrahydrobiopterin-dehydratase
MNALNQAHCEACRADAPKVTDEELAVLIREIPDWNIEVRDGHMELERVFLFKNFKHALAFTNAIGEIAEAEGHHPGLLTEWGKVTVTWWSHSIKGLHRNDFIMCARTDEVAKTAEGRK
>NZ_CP014343.1|WP_062360651.1|4130161_4130950_+|phenylalanine-4-monooxygenase
MKQTQYVAREPDAHGFIDYPQQEHAVWNTLITRQLKVIEGRACQEYLDGIEQLKLPHDRIPQLGEINKVLGATTGWQVARVPALIPFQTFFELLASKRFPVATFIRTPEELDYLQEPDIFHEIFGHCPLLTNPFFAEFTHTYGKLGLAATKEQRVYLARLYWMTIEFGLMETAQGRKIYGGGILSSPKETVYSLSGEPEHQAFDPIEAMRTPYRIDILQPLYFVLPNMKRLFDLAHEDIMAMVHQAMQLGLHAPKFPPKVAA
>NZ_CP014343.1|WP_062574778.1|4128345_4129905_-|sigma-54-dependent-transcriptional-regulator
MRIKVHCQNRIGILRDILNLLVEYGINVLRGEVGGDHGNAIYLHCPNLINLQFQALRPKFESIAGVFGVKRVGLMPSERRHMELNALLGALDFPVLSIDMGGSIVAANRGAAQLLGVRVDEVPGIPLSRYVEDFDLPELIRANKSRINGLRIKVKGDVFLADIAPLQSEHDDSEALAGAVITLHRADRIGERIYNVRKQELRGFDSIFQSSRVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQAPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHIPPLRECMDGLEGLVQHFLDQASRQIGCPMPRLAPAAMDKLAQYHWPGNVRQLENVLFQAVSLCEGGVVKSEHIRLPDYGARQPLGEFSLDGDLSQIVGRFEKAVLESLMSEFPSSRALGKRLGVSHTTIANKLRDYSLSKSAE
>NZ_CP014343.1|WP_023630669.1|4127923_4128178_+|DUF2790-domain-containing-protein
MKALLVLVLGGFCGAALAGEAKDVEQIPVEQYSYSQHLDIARVISMSEVPNVCEVVPARMTYEDSQGQKHILEYRVMGNGCSNG
>NZ_CP014343.1|WP_028691072.1|4125555_4127517_-|acetate--CoA-ligase
MSAAPLYPVRPEVAASTLTDEATYKAMYQQSVINPDGFWREQAQRLDWIKPFTKVKQTSFDDHHVDIKWFADGTLNVSYNCLDRHLAERGDQLAIIWEGDDPSEHRNITYRELHEQVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACARIGAIHSVVFGGFSPEALAGRIIDCKSKVVITADEGLRGGRRTPLKANVDLALTNPETNSVQKIIVCKRTGGDIAWHQHRDIWYEDLMKVASSHCAPKEMGAEEALFILYTSGSTGKPKGVLHTTGGYLVYAALTHERVFDYRPGEVYWCTADVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITRVSKIVDKHKVNILYTAPTAIRAMMAEGEAAVAGADGSSLRLLGSVGEPINPEAWNWYYKTVGKERCPIVDTWWQTETGGVLISPLPGATALKPGSATRPFFGVVPALVDNLGNLIEGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESAMVAHPKVAEAAVVGVPHDIKGQGIYVYVTLNAGEESSEQLRQELKNWVRKEIGPIASPDVIQWAPGLPKTRSGKIMRRILRKIATGEYDALGDISTLADPGVVQHLIDTHKAMSLATA
>NZ_CP014343.1|WP_050706738.1|4124239_4125025_-|ABC-transporter-substrate-binding-protein
MKKLALLGALALSVFSLVSQADEKPLKIGIEAAYPPFAFKQPDGSLAGFDYDIGNALCEQMKAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKEGTAVSDSLAELKGKKIGVQRGSIHDRFAKEVLAPQGATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDTKYFGDGVGIAVRKGDTANAERINAAIDAIRANGKYKEIEKKYFNFDIYGPDSK
>NZ_CP014343.1|WP_062574777.1|4123458_4124148_-|ABC-transporter-permease
MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQDIINRVAPLLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGAAYGMSGVQVFFRIMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATREPFTFFLAVAALYLVLTSVSLLALKYLEKRYSVGVKAAEL
>NZ_CP014343.1|WP_062574776.1|4122763_4123462_-|ABC-transporter-permease
MIFDYNVIWEAMPLYLGGLLTTLKLLALSLLFGLLAAVPLGLMRVSKQPLVNMSAWLYTYVIRGTPMLVQLFLIYYGLAQFEAVRESFLWSWLSSATFCACLAFAINTSAYTAEIIAGSLKATPHGEIEAAKAIGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERRWLGYLAPRKH
>NZ_CP014343.1|WP_023630946.1|4121976_4122741_-|ATP-binding-cassette-domain-containing-protein
MYKLQIQDLHKRYGSHEVLKGVSLEAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKILLNNEELKLVAGKDGALKAADPKQLQRMRSRLSMVFQHFNLWSHMTALENVIEAPVHVLGVNKKEALEKAEHYLAKVGVSHRKDAFPGHMSGGEQQRVAIARALAMEPEVMLFDEPTSALDPELVGDVLKVMQSLAQEGRTMVVVTHEMGFAREVSNQLVFLHKGLVEERGCPREVLVNPQSERLKQFLSGSLK
>NZ_CP014343.1|WP_062574781.1|4133295_4138545_+|hypothetical-protein
MSTRPSTDEDLDNSIQSPVPALVANDLDIPLSVPRDACDAIRAVHLTLNYLLDGNTRFPEEPRFIFRNLMDLYGDARTYALVAAVLDVAPDTLTPRQIHQFFARIAWVNEASIKTPTAKKQLDELLFGEKALSAETARLGKDEFSELGELLTGVPAALQTWMLQFKRGERRDIASDWLAQCPAENLLKDLTAYELNPAQTALTALTLTLQEVLPTRTEYEDNALIISRNLQLTQPMMKLRVRVLPGASQVPPLANEDGYRDDSPSVEWSNAQTQDLGTRLLRKVVLHALDASTEAWVPLTLDNVQRAQGMQAFSFAHTLKQVHPALSTPDCLRIASLLLPSTPEMAAPSPLDPLPDSRALIETLPAFSDWCTHTLIDDVFTNAGCELLSELKQGERHLLLPASKTWQLMMGSSQFADVFRPLLAQAGWYGASQAESASPRATQALASRAIVDHFLGPRTPADQSLAENFHDHWVTEHSHVELRVKVSDNIRARNPGISPAALSLLEYLLLRELAPELLITDTPDWLYYGRSLQSLALMHGARLLEAILPGACSRATYDKVITLASDLSSVNDEQLQRQWSSTLILPALRYAKAHGALPDFTGNDIRQATQQQMNSAVQFVTSEQQAFAQDAQQIAMTPPDRKTLAEQQLAEAGVDKQYWDKAINAPWIWNHLSDLGLAKSSSYNWHQTTATPGFTSDVDEPSQKPVIENLTQLIMTGDIYREGKSTVPQLYDQAFETFKNVWQAAQARLIRRLFLEMPQALRNRLYTSTCEVNLVTFEETPNSKEQAGTQGLFIRCQPGDHRADFDTHEASTEYFFELTPGAGALRPCSQQFNYKVVPDTGFSGNIVETVAKHWENNERKRQARVTPLQPLDSDAYLNGTPSRFADQLQTPRRGKLIAATERIYAQQASEGDFFQTLATTATAHLYASTLAQFKARHTHTTPWEELVDLEKQVADFLARTLLPFYGCIADLVKGDHSAGVITGCVLDAVGVLIPAGKFIASSLALIRDAANLTLRATCEIMSSAIGDLLLHLAEQSPVLIYRDIGRGIRWLFVKSWEKLAQPALRWLHDLRGAQQLLHTTEQGTYAITREALSDLGHVALPGELEQVGSSENTLVRNLGTPETPNFKLLDPHDNLPFGPRLIGEDASLAHSLVPLKAPGSISPNHYPTRIITVATADDRLIMSIDAACEVRVRYKGEGHYDIHIDDHGYHLDTTSAEPCLTELPKAPVSELTDVEAEQILCRLRRDVIEVSCTPHTKLVSLPAERLRAPDADPLTRGQEISQAFETKEFHLERRTIPASEQSPEQTHDLLVHEGKFCKWDHAPIKRTNPVRFTPDKQIVALSAEQRDALGLPEAPRYRAEIKGRMSRERNFGFSDQISGTQAKTINPQVPVVELDQICDQVFDRRRLRGISMEWETETYIYVEVDNGRFYKTRQGPGELSFTPVSDPAEIDEYLRLSNQYRFVSERPYSAIDRDNIAKLLYGTLVEKNEPGLQTWIASAPRNREYQAYAQWCIDNNVRNDMLHFAENILSGERSQSALVEETRGLIPDWRKITQRNIAEKSATAETLNELLPIQGKEASWVPVTAKNIGDDAVSKMISKQVNTSNLAFFSIQTKEGKKFVYYALAGGKRAEKLNLKIHVQGEHSRTIKGITYTDARALMKDRAPDPSITSLPNVRHADRLAIAGHSRHLDAERLIASIVKEQHPANSIDSIHVFTRMDTCRSCGGVVLPQLALAYNDADFWVTYLDDYQ
>NZ_CP014343.1|WP_062574782.1|4138673_4141691_-|FAD-binding-oxidoreductase
MIAQLPPRAPAAYYPEFLEALKNSGFRGQISADYGTRTVLATDNSIYQRLPQAAVFPLDADDVARVATLMAEPRFRDIKLTPRGGGTGTNGQSLTDGIVVDLSRHMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELHSVLLGGERLHSLPIDDATLEQACAAPGRVGEVYRMAREIQQTQAGLIESTFPKLNRCLTGYDLAHLRDEQGRFNLNSVLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMAHKPLSIETVDSKVLMLAMKDIVWHSVAEYFPADAERPTLGINLVEFCGDEPAEVNARVEAFVAHLQRDTSVERLGHTLAEGAEAVTRVYTMRKRSVGLLGNVEGEVRPQPFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTQRYGGLLWGEHGKGLRSEYVPEYFGELYPALQRLKGAFDPHNQLNPGKICTPPDSAEGLTPVDGVTLRGDLDRSIDERVWQSFGSAVHCNGNGACYNYDPNDAMCPSWKATRERQHSPKGRASLIREWLRLQGEANIDVLAAAQRKASWFKGLPARLRNSRARQQGQEDFSHEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPGLYNAVMGSKWVSRLLADKVGMVDSPLISRFNFQATLTRCRVQVASVPALRELTPAQRERSIVLVQDAFTRYFETPLLASFIDLAHRLGHKVFLAPYSANGKPLHVQGFLGAFARAAIRNATQLKALADCGVPLVGLDPAMTLVYRQEYQKVDGVECPSVLLPQEWLMNVLPERAPAKADSFRLMAHCTEKTNVPASTKQWEQVFARLGLKLVTEATGCCGMSGTYGHEARNQETSKTIFEQSWATKLDRQGEALATGYSCRSQVKRMTDKQLRHPLEVVLQYAQR
>NZ_CP014343.1|WP_062574783.1|4141843_4142725_+|LysR-family-transcriptional-regulator
MNYRHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQLTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAHPGMLVHIHSRIEAINFDTSEIDAAIGVATHDLPGLVCHRLHAEELVVILPPEAKVDGHWNPQRISEQVLLNVANNPHAWGEWFSHHALPHRTMRLGPSFELTSHLIQAVRAGIGIGLVPRILVQEELASGELFSPGTPFASQRSYYLIYPPRNEALPSLRAFRGWLLEQI
>NZ_CP014343.1|WP_062574784.1|4142797_4144216_-|amino-acid-permease
MSGHNSQSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVMKSAGPSMILGYAICGFIAFMIMRQLGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNCWVLYILVGMSELSAVGKYVHYWWPEIPTWVTAAAFFLLINAINLMNVKFFGEAEFWFAIIKVAAIVGMIGLGAYLLTSGSGGPEASVTNLWAHGGFFPHGVSGLVMALAFIMFSFGGLEMLGFTAAEADKPKTVIPKAINQVIYRILIFYVGALVVLLSLTPWDSLVASIDASGGSYGSSPFVQVFSLLGSDVAAHLLNFVVLTAALSVYNSGTYCNARMLLGMAEQGDAPAALAKVDRRGVPVRSILVSAAVTLIAVLLNYLMPQNALELLMSLVVATLVINWAMISYSHLKFRQHLDRTGQKPLFKALWYPYGNYLVLAFVVLILGIMLQIPGIQVSVYAMPVWLVVMYVAYQLKSKRGSQANGAAGSIAK
>NZ_CP014343.1|WP_062574785.1|4144870_4145935_-|pseudouridine-synthase
MSDKDLQDQQPTPPSGEKLQKVLARIGVGSRRDVEAWIGQGRIKVNGVEATLGLRVDLHDAITVDGKLIKRVEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGRLDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDDMIDRLKAGVVLEDGPAKFTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGVVVSRLKRVRFGPVFLNSDLPMGRWREMSQGEIDILAAEVGLQPVALPEMKLKAKDKLERLQRKSTRPLGRGERVRTLRPAAEGKDERPARAPREESAPRKSGRGSTVAERPSEMRKRPARPEGDKPAGRGRGKPRG
>NZ_CP014343.1|WP_062574786.1|4146109_4146871_-|SMC-Scp-complex-subunit-ScpB
MNLNEPRELASLIEAFLLASGKPQSLERLYELFEEAERPAPAVFKKALDVLGKSCSGRAFELKEVASGYRLQIREDYAPWVGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGVAVNSNIIKTLMEREWIRIVGYREVPGRPAMFATTKAFLDHFNLKSLDELPALAELREMEPEPLLDPDEAPVPAHLQALADASLGGEGEEVQPKEQTSFRSLLVELDAMEEGLKTDFDDLRDEASVEPEDEPKA
>NZ_CP014343.1|WP_062574787.1|4146885_4147713_-|segregation/condensation-protein-A
MSQTETPEAPAEEADAPQQLQLALVYGEALTELPVDLYIPPDALEVILEAFEGPLDLLLYLIRKQNIDILDIPVAEITRQYMGYVELMKSVRLELAAEYLVMAAMLAEIKSRMLLPRSSEIEEEEGDPRAELIRRLQEYERFKAAAEGIDELPRVGRDVVVPRLEAPQAKVRKLLPEVALEEILLSMAEVMRRNDLFESHQITRETLSTRERMSEVLERLKGGGFVPFVELFSREEGKLGVVVTFMAILELVKESLIELVQNEPFAPIHVRARAE
>NZ_CP014343.1|WP_062575760.1|4147709_4148339_-|threonylcarbamoyl-AMP-synthase
MSQFFQIHPENPQPRLIKQAVEIIRKGGVVVYPTDSAYALGCQIGNKAAIERVRKLRGLDKTHNFTLMCCDMSQLGLYAKVDTGTFRLLKAHVPGPYTFILNGTREVPRLLLHEKRRTIGLRVPKHEITLALLAELGEPLMSVSLILPGDAEPMVDPYEIRERLEHNVDLVIDGGFGDLKASTIIDLSGDEPALIREGCGDPTPFLVNA
>NZ_CP014343.1|WP_062574788.1|4148352_4149213_-|PHP-domain-containing-protein
MNVDLHCHSTASDGALSPTALVARAHEHGVRTLSLTDHDTLEGLPEARQACLDNGMRWISGVELSCTWGGATIHVLGYDFPLDAPPLLEAIDNLHRGRWLRAEEIDRKLAAKGMPGALDGARAVQQELGDSGNAPARPHFAEFLVRAGFVKDRGEAFRKWLGAGKLGDVKLHWPTLEETVATLRQSNAWVSLAHPMHYDLTRSKRRRLIADYIQAGGQALEVVNGMMPPEQVGTMSILTREFGLLASAGSDFHGPGTWGEIGAYRPLPEDLPPLWRRFRHEQPMAV
>NZ_CP014343.1|WP_062574789.1|4149280_4149877_+|septation-protein-A
MKQFIDFIPLLLFFIVYKLDPRPVEFAGHGFEFGGIYSATAMLIASSVVVYGALFLRHGKLEKGQLLTLVACLVFGGLTLAFHSETFLKWKAPVVNWLFALAFAGSHFIGDRVLIKRIMGHALTLPETVWNRLNLAWIGFFLVCGAANLFVAFTFQDIWVDFKVFGSLGMTVLFLVAQGVYLSRHLHDTDPSTSKPKD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014343_2	2.1\|4133114\|34\|NZ_CP014343\|CRISPRCasFinder	4133114-4133147	34	MN694686	Marine virus AFVG_250M1040, complete genome	95-128	9	0.735
NZ_CP014343_2	2.1\|4133114\|34\|NZ_CP014343\|CRISPRCasFinder	4133114-4133147	34	MN694686	Marine virus AFVG_250M1040, complete genome	41292-41325	9	0.735

1. spacer 2.1|4133114|34|NZ_CP014343|CRISPRCasFinder matches to MN694686 (Marine virus AFVG_250M1040, complete genome) position: , mismatch: 9, identity: 0.735

tcccctgtatcccaaaaccagatactccacgagt-----	CRISPR spacer
cccacggtatcccaaaaccagatact-----aattatca	Protospacer
.** * ********************     *.*

2. spacer 2.1|4133114|34|NZ_CP014343|CRISPRCasFinder matches to MN694686 (Marine virus AFVG_250M1040, complete genome) position: , mismatch: 9, identity: 0.735

tcccctgtatcccaaaaccagatactccacgagt-----	CRISPR spacer
cccacggtatcccaaaaccagatact-----aattatca	Protospacer
.** * ********************     *.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1068037 : 1075803

Thermobifida_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062572910.1\|1068037_1068892_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	9.0e-08	31.9
WP_062572911.1\|1068894_1069359_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_011532415.1\|1069371_1069680_-	ribosome-associated translation inhibitor RaiA	A0A0K1LP60	Escherichia_phage	1.1e-05	35.2
WP_028689657.1\|1069758_1071258_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_011532417.1\|1071431_1072157_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.4e-23	26.5
WP_011532418.1\|1072157_1072682_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_062572912.1\|1072668_1073241_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_062572913.1\|1073249_1073774_-	HAD family hydrolase	A0A140XBD6	Dickeya_phage	5.8e-26	45.9
WP_028689660.1\|1073774_1074749_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.7e-34	32.5
WP_062572914.1\|1074993_1075803_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-24	32.1

DBSCAN-SWA_2

1566933 : 1574569

Leptospira_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062573211.1\|1566933_1568487_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.0e-82	34.9
WP_081100366.1\|1568505_1568862_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.8e-16	41.2
WP_081100367.1\|1568946_1569219_-	hypothetical protein	A0A291L9W7	Bordetella_phage	1.8e-23	64.2
WP_062573214.1\|1569677_1571123_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.2e-58	31.5
WP_062573215.1\|1571187_1572543_+	phosphomannomutase/phosphoglucomutase	A0A1X9I671	Streptococcus_phage	4.1e-07	24.5
WP_062573216.1\|1572542_1573337_+	ABC transporter permease	NA	NA	NA	NA
WP_081100232.1\|1573333_1574569_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.6e-11	24.2

DBSCAN-SWA_3

2115772 : 2124281

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028692382.1\|2115772_2117053_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-96	54.4
WP_062573549.1\|2117053_2118445_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_062573550.1\|2118478_2119438_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_062573551.1\|2119535_2120552_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.0e-151	79.6
WP_028692378.1\|2120548_2120884_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	4.0e-44	77.5
WP_062573552.1\|2120880_2121177_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.8e-25	63.6
WP_062573553.1\|2121176_2121536_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.7e-35	64.2
WP_062573554.1\|2121537_2121930_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.8e-54	79.8
WP_062573555.1\|2122015_2123395_-	uracil-xanthine permease	H9YQ34	environmental_Halophage	7.4e-28	51.1
WP_062573556.1\|2123609_2124281_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	8.1e-105	91.5

DBSCAN-SWA_4

3120314 : 3131104

uncultured_Caudovirales_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062574221.1\|3120314_3123389_-	error-prone DNA polymerase	A0A0K1Y906	Streptomyces_phage	1.6e-102	29.0
WP_062574222.1\|3123385_3124804_-	DNA polymerase Y family protein	NA	NA	NA	NA
WP_062574223.1\|3124810_3125431_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA
WP_081100384.1\|3125430_3126039_-	repressor LexA	I6S1S3	Salmonella_phage	1.6e-06	45.1
WP_062574225.1\|3126242_3126812_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	8.2e-58	64.9
WP_062574226.1\|3126804_3127887_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	8.2e-107	66.1
WP_062574228.1\|3128212_3128926_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.3e-116	86.5
WP_062574229.1\|3128949_3129420_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	3.6e-67	83.3
WP_062574230.1\|3129434_3130718_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	3.4e-200	85.0
WP_062574231.1\|3130747_3131104_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	4.1e-39	66.7

DBSCAN-SWA_5

4340987 : 4395711

uncultured_Caudovirales_phage(37.93%)

tRNA,plate,tail,holin,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028690589.1\|4340987_4342763_-\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	5.6e-12	26.3
WP_003254776.1\|4342857_4343079_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_062575767.1\|4343168_4343489_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA
WP_028690591.1\|4343683_4344157_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	6.2e-19	37.9
WP_028690592.1\|4344424_4345018_+	cold shock domain-containing protein	A0A1X9IGI9	Lactococcus_phage	2.3e-10	48.3
WP_028690593.1\|4345037_4345226_-	hypothetical protein	NA	NA	NA	NA
WP_028690594.1\|4345252_4345672_-	HIT domain-containing protein	NA	NA	NA	NA
WP_028690595.1\|4346433_4347750_+	OprD family porin	NA	NA	NA	NA
WP_062574894.1\|4347907_4349623_+\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	2.6e-06	24.4
WP_062574895.1\|4349644_4350598_+	hypothetical protein	NA	NA	NA	NA
WP_062574896.1\|4350629_4351694_-	DNA polymerase IV	NA	NA	NA	NA
WP_062574897.1\|4352433_4355076_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_062574898.1\|4355075_4356368_+	virulence factor family protein	NA	NA	NA	NA
WP_062574899.1\|4356403_4358302_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	5.3e-77	35.8
WP_050704462.1\|4358537_4359869_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_028690603.1\|4359954_4360413_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_062575768.1\|4360534_4361245_+	RNA-binding protein	NA	NA	NA	NA
WP_028690605.1\|4361451_4361913_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.0e-37	50.7
WP_062361257.1\|4361919_4362612_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_028690607.1\|4362690_4363470_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_028690608.1\|4363590_4364517_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_028690609.1\|4364521_4364887_-	diacylglycerol kinase	NA	NA	NA	NA
WP_028690610.1\|4364964_4365615_-	response regulator transcription factor	NA	NA	NA	NA
WP_028690611.1\|4365871_4366582_-	DTW domain-containing protein	NA	NA	NA	NA
WP_062574900.1\|4366796_4367216_+	hypothetical protein	NA	NA	NA	NA
WP_062574901.1\|4367217_4367424_-	hypothetical protein	NA	NA	NA	NA
WP_062574902.1\|4367727_4368846_+	LOG family protein	NA	NA	NA	NA
WP_062574903.1\|4368897_4369368_-	recombination regulator RecX	NA	NA	NA	NA
WP_028690616.1\|4369376_4370453_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.3e-112	62.4
WP_062574904.1\|4370557_4371040_-	nicotinamide-nucleotide amidohydrolase family protein	B5TK85	Pseudomonas_phage	3.5e-57	76.1
WP_062574905.1\|4371087_4371648_-	hypothetical protein	NA	NA	NA	NA
WP_081100333.1\|4371719_4372985_-	hypothetical protein	NA	NA	NA	NA
WP_062575769.1\|4373071_4373533_-	lysozyme	B5TK84	Pseudomonas_phage	2.3e-34	59.9
WP_062574907.1\|4373565_4374117_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	3.7e-71	68.9
WP_062574908.1\|4374334_4375369_-	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.0e-139	71.1
WP_028690634.1\|4375384_4375591_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	5.5e-20	68.7
WP_062574909.1\|4375565_4376411_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.0e-84	57.1
WP_062574910.1\|4376420_4378709_-	hypothetical protein	NA	NA	NA	NA
WP_062574911.1\|4378834_4379137_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.9e-21	57.4
WP_062574912.1\|4379149_4379659_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	4.0e-64	71.9
WP_062574913.1\|4379672_4380839_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	3.7e-182	82.0
WP_081100334.1\|4380922_4381351_-	hypothetical protein	Q9ZXK5	Pseudomonas_virus	7.6e-32	52.9
WP_062574914.1\|4381359_4383807_-	hypothetical protein	A0A077K818	Ralstonia_phage	9.0e-85	54.0
WP_062574915.1\|4383799_4384408_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	5.1e-74	66.0
WP_062574916.1\|4384409_4385291_-\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.4e-106	68.3
WP_028690641.1\|4385287_4385614_-	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.6e-34	67.9
WP_023631778.1\|4385717_4386050_-	hypothetical protein	NA	NA	NA	NA
WP_062574917.1\|4386284_4386845_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.2e-54	56.4
WP_062574918.1\|4386841_4387339_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	9.8e-15	33.9
WP_062574919.1\|4387401_4388232_-\|bacteriocin	putidacin L1 family lectin-like bacteriocin	NA	NA	NA	NA
WP_062574920.1\|4388242_4388431_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	7.4e-08	65.8
WP_062574921.1\|4388456_4388804_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	9.2e-44	82.2
WP_081100335.1\|4389266_4390013_-	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	1.9e-115	82.9
WP_062574922.1\|4390162_4392736_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	1.4e-27	22.9
WP_028690650.1\|4392877_4393201_+	ferredoxin family protein	NA	NA	NA	NA
WP_011535249.1\|4393743_4394751_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	3.9e-34	35.8
WP_028690651.1\|4394856_4395711_-	peptidoglycan DD-metalloendopeptidase family protein	I3PV79	Clostridium_phage	1.4e-13	36.2

DBSCAN-SWA_6

5396954 : 5467144

Escherichia_phage(23.08%)

holin,protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062575492.1\|5396954_5398013_-\|holin	phosphorylcholine phosphatase	NA	NA	NA	NA
WP_062575493.1\|5398257_5399649_+	L-cystine transporter	NA	NA	NA	NA
WP_062575494.1\|5399779_5400298_-	dihydrofolate reductase	A0A1B2IBQ4	Erwinia_phage	5.8e-26	39.7
WP_062575495.1\|5400352_5401744_+	DUF2868 domain-containing protein	NA	NA	NA	NA
WP_062575496.1\|5401736_5403101_+	GTPase/DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	1.1e-55	41.9
WP_062575497.1\|5403193_5403616_+	hypothetical protein	NA	NA	NA	NA
WP_155721694.1\|5403758_5404046_-	hypothetical protein	NA	NA	NA	NA
WP_051555623.1\|5404050_5404467_-	hypothetical protein	NA	NA	NA	NA
WP_051555624.1\|5404466_5405369_-	NAD synthetase	NA	NA	NA	NA
WP_062575498.1\|5405443_5406370_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_081100357.1\|5406448_5408215_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_062575499.1\|5408207_5409410_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_062575500.1\|5409409_5410114_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-17	33.5
WP_062575501.1\|5410113_5413113_-	protein kinase	S4VR00	Pandoravirus	5.2e-18	28.4
WP_028689164.1\|5413120_5413840_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_062575502.1\|5413836_5414493_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_062575503.1\|5414489_5417996_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_062575504.1\|5417992_5419303_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_028689168.1\|5419309_5420644_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_062575505.1\|5420659_5421160_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_062575506.1\|5421209_5422580_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_062575507.1\|5422977_5424006_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_023632506.1\|5424079_5424595_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_062575508.1\|5424606_5426100_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_028689173.1\|5426192_5426681_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_028689174.1\|5426753_5427188_+	hypothetical protein	NA	NA	NA	NA
WP_062575509.1\|5427184_5427595_+	hypothetical protein	NA	NA	NA	NA
WP_028689176.1\|5427588_5428104_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_062575510.1\|5428100_5429963_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_062575511.1\|5429926_5430976_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_062575512.1\|5430968_5433644_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	6.3e-84	32.0
WP_062575513.1\|5433655_5435584_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.4e-40	26.4
WP_062575514.1\|5435737_5437405_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
WP_062575515.1\|5437435_5438740_-	OprD family porin	NA	NA	NA	NA
WP_062575516.1\|5439264_5441355_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_062575517.1\|5441828_5442935_-	agmatine deiminase	M1HH76	Paramecium_bursaria_Chlorella_virus	6.6e-104	52.2
WP_062575518.1\|5443177_5446078_-	aminotransferase	NA	NA	NA	NA
WP_062575519.1\|5446245_5447328_+	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	2.5e-95	52.2
WP_062575520.1\|5447324_5448200_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	4.0e-104	64.4
WP_062575521.1\|5448196_5448745_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.3e-47	51.9
WP_062575522.1\|5448741_5449602_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.8e-25	33.3
WP_062362721.1\|5449641_5451456_+	sensor histidine kinase	NA	NA	NA	NA
WP_062575523.1\|5451452_5452859_+	sigma-54-dependent Fis family transcriptional regulator	W8CYM9	Bacillus_phage	1.3e-08	29.5
WP_062575524.1\|5452855_5453311_+	thioesterase	NA	NA	NA	NA
WP_062575525.1\|5453342_5454176_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_050703344.1\|5454172_5454739_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_062575526.1\|5454803_5455466_+	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_062575527.1\|5455510_5455951_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_062575528.1\|5456126_5456954_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_062575529.1\|5456962_5459308_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_028689199.1\|5459673_5460153_+	hypothetical protein	NA	NA	NA	NA
WP_062575530.1\|5460362_5461172_+	protein-glutamate O-methyltransferase	NA	NA	NA	NA
WP_050703335.1\|5461290_5461947_+	response regulator transcription factor	NA	NA	NA	NA
WP_062575531.1\|5461936_5462371_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_050703331.1\|5462587_5464129_-	phosphoenolpyruvate carboxykinase	A0A2H4PQN1	Staphylococcus_phage	2.7e-127	47.3
WP_062575532.1\|5464308_5465211_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_062575533.1\|5465319_5466120_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_062575534.1\|5466150_5466552_-	RNA-binding protein	NA	NA	NA	NA
WP_062575535.1\|5466661_5467144_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014343

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection