CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007491	Escherichia coli strain ACN002 chromosome, complete genome	7 crisprs	DinG,cas3,DEDDh,c2c9_V-U4,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	0	15	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007491_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_1

67153-67268

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007491_1

>merge|NZ_CP007491|1|67153-67268|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAACACAGCGCGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>NZ_CP007491|1|1|67153-67268|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAACACAGCGCGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_000525176.1\|60224_60884_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP007491.1\|WP_001200579.1\|59292_60108_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP007491.1\|WP_001117011.1\|60895_63802_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP007491.1\|WP_000916291.1\|72681_73380_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP007491.1\|WP_000951786.1\|68800_70501_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP007491.1\|WP_000746150.1\|56683_59038_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP007491.1\|WP_000035637.1\|63966_66318_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP007491.1\|WP_001065381.1\|53537_54359_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP007491.1\|WP_001148402.1\|71803_72568_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP007491.1\|WP_000151734.1\|67287_68790_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP007491.1\|WP_001297366.1\|76096_77752_-\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP007491.1\|WP_000888642.1\|66392_67088_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP007491.1\|WP_001295536.1\|74949_75933_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP007491.1\|WP_000800453.1\|55344_56631_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP007491.1\|WP_001248770.1\|77840_77972_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP007491.1\|WP_000637846.1\|78073_79252_+\|sugar-efflux-transporter-SetA	unknown	unknown	gnl\|CDD\|129977
NZ_CP007491.1\|WP_000610901.1\|53157_53535_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP007491.1\|WP_001300811.1\|70839_71718_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP007491.1\|WP_000235714.1\|73363_74974_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NZ_CP007491.1\|WP_000241271.1\|54355_55345_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_000525176.1\|60224_60884_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.37214e-159
NZ_CP007491.1\|WP_001200579.1\|59292_60108_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.49529e-169
NZ_CP007491.1\|WP_001117011.1\|60895_63802_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP007491.1\|WP_000916291.1\|72681_73380_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	1.49788e-164
NZ_CP007491.1\|WP_000951786.1\|68800_70501_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP007491.1\|WP_000746150.1\|56683_59038_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP007491.1\|WP_000035637.1\|63966_66318_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP007491.1\|WP_001065381.1\|53537_54359_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
NZ_CP007491.1\|WP_001148402.1\|71803_72568_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.3759e-49
NZ_CP007491.1\|WP_000151734.1\|67287_68790_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP007491.1\|WP_001297366.1\|76096_77752_-\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP007491.1\|WP_000888642.1\|66392_67088_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	1.31794e-177
NZ_CP007491.1\|WP_001295536.1\|74949_75933_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP007491.1\|WP_000800453.1\|55344_56631_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP007491.1\|WP_001248770.1\|77840_77972_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
NZ_CP007491.1\|WP_000637846.1\|78073_79252_+\|sugar-efflux-transporter-SetA	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP007491.1\|WP_000610901.1\|53157_53535_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP007491.1\|WP_001300811.1\|70839_71718_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP007491.1\|WP_000235714.1\|73363_74974_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NZ_CP007491.1\|WP_000241271.1\|54355_55345_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0

>NZ_CP007491.1|WP_000888642.1|66392_67088_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRLVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIATGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP007491.1|WP_000035637.1|63966_66318_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDIRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYIRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NZ_CP007491.1|WP_001117011.1|60895_63802_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NZ_CP007491.1|WP_000525176.1|60224_60884_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NZ_CP007491.1|WP_001200579.1|59292_60108_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NZ_CP007491.1|WP_000746150.1|56683_59038_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL
>NZ_CP007491.1|WP_000800453.1|55344_56631_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NZ_CP007491.1|WP_000241271.1|54355_55345_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRTYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPLLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NZ_CP007491.1|WP_001065381.1|53537_54359_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NZ_CP007491.1|WP_000610901.1|53157_53535_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NZ_CP007491.1|WP_000151734.1|67287_68790_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>NZ_CP007491.1|WP_000951786.1|68800_70501_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDTTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>NZ_CP007491.1|WP_001300811.1|70839_71718_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NZ_CP007491.1|WP_001148402.1|71803_72568_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGG
>NZ_CP007491.1|WP_000916291.1|72681_73380_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELLSGKASASALLGITG
>NZ_CP007491.1|WP_000235714.1|73363_74974_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLKWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NZ_CP007491.1|WP_001295536.1|74949_75933_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NZ_CP007491.1|WP_001297366.1|76096_77752_-|DNA-binding-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NZ_CP007491.1|WP_001248770.1|77840_77972_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>NZ_CP007491.1|WP_000637846.1|78073_79252_+|sugar-efflux-transporter-SetA
MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007491_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_2

252640-252793

Orphan

Consensus_repeat	Method
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007491_2

>merge|NZ_CP007491|2|252640-252793|CRISPRCasFinder
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAACCTGTGCTGGATCGGTAGGCCGGATAAGGCG

>NZ_CP007491|2|2|252640-252793|CRISPRCasFinder
CGCGTCTTATCATGCCTACAAACCTGTGCCGGATCGGTAGGCCGGATAAGGCG	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA
CGCGTCTTATCATGCCTACAAACCTGTGCTGGATCGGTAGGCCGGATAAGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_000189539.1\|260169_261414_+\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NZ_CP007491.1\|WP_001225679.1\|250146_250887_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP007491.1\|WP_000093939.1\|251187_251937_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP007491.1\|WP_001284199.1\|239080_239563_-\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_CP007491.1\|WP_001295204.1\|257704_257845_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181271
NZ_CP007491.1\|WP_000749881.1\|261911_262967_-\|phosphoporin-PhoE	unknown	unknown	gnl\|CDD\|182275
NZ_CP007491.1\|WP_000532698.1\|245424_245898_+\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
NZ_CP007491.1\|WP_000978828.1\|242612_243062_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007491.1\|WP_000174677.1\|261471_261873_+\|sigma-factor-binding-protein-Crl	unknown	unknown	gnl\|CDD\|182882
NZ_CP007491.1\|WP_000973090.1\|245940_248385_-\|acyl-CoA-dehydrogenase-FadE	unknown	unknown	gnl\|CDD\|236528
NZ_CP007491.1\|WP_001118055.1\|244500_245271_-\|2-oxoglutaramate-amidase	unknown	unknown	gnl\|CDD\|182461
NZ_CP007491.1\|WP_000952760.1\|252927_254667_-\|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
NZ_CP007491.1\|WP_000284050.1\|248624_249203_+\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP007491.1\|WP_001291992.1\|259619_260078_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP007491.1\|WP_000006256.1\|252112_252610_+\|REP-associated-tyrosine-transposase-RayT	unknown	unknown	gnl\|CDD\|224854
NZ_CP007491.1\|WP_001059874.1\|256519_256972_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP007491.1\|WP_001226155.1\|255467_256523_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP007491.1\|WP_000333380.1\|249408_250176_+\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP007491.1\|WP_001293003.1\|257901_259359_-\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP007491.1\|WP_000207589.1\|254611_255397_+\|putative-lateral-flagellar-export/assembly-protein-LafU	unknown	unknown	gnl\|CDD\|235860

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_000189539.1\|260169_261414_+\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NZ_CP007491.1\|WP_001225679.1\|250146_250887_-\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116
NZ_CP007491.1\|WP_000093939.1\|251187_251937_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	3.06441e-41
NZ_CP007491.1\|WP_001284199.1\|239080_239563_-\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	2.49397e-78
NZ_CP007491.1\|WP_001295204.1\|257704_257845_+\|hypothetical-protein	gnl\|CDD\|181271	PRK08179, prfH, peptide chain release factor-like protein; Reviewed.	6.09679e-17
NZ_CP007491.1\|WP_000749881.1\|261911_262967_-\|phosphoporin-PhoE	gnl\|CDD\|182275	PRK10159, PRK10159, phosphoporin PhoE.	0
NZ_CP007491.1\|WP_000532698.1\|245424_245898_+\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	9.39999e-93
NZ_CP007491.1\|WP_000333380.1\|249408_250176_+\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	8.29603e-146
NZ_CP007491.1\|WP_000174677.1\|261471_261873_+\|sigma-factor-binding-protein-Crl	gnl\|CDD\|182882	PRK10984, PRK10984, sigma factor-binding protein Crl.	1.11584e-87
NZ_CP007491.1\|WP_000973090.1\|245940_248385_-\|acyl-CoA-dehydrogenase-FadE	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP007491.1\|WP_001118055.1\|244500_245271_-\|2-oxoglutaramate-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
NZ_CP007491.1\|WP_000952760.1\|252927_254667_-\|flagellar-biosynthesis-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP007491.1\|WP_000284050.1\|248624_249203_+\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
NZ_CP007491.1\|WP_001291992.1\|259619_260078_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	5.05624e-113
NZ_CP007491.1\|WP_000006256.1\|252112_252610_+\|REP-associated-tyrosine-transposase-RayT	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.32036e-43
NZ_CP007491.1\|WP_001059874.1\|256519_256972_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	4.77997e-103
NZ_CP007491.1\|WP_001226155.1\|255467_256523_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP007491.1\|WP_001293003.1\|257901_259359_-\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP007491.1\|WP_000207589.1\|254611_255397_+\|putative-lateral-flagellar-export/assembly-protein-LafU	gnl\|CDD\|235860	PRK06778, PRK06778, hypothetical protein; Validated.	5.17999e-173

>NZ_CP007491.1|WP_000006256.1|252112_252610_+|REP-associated-tyrosine-transposase-RayT
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDINAGERIIL
>NZ_CP007491.1|WP_000093939.1|251187_251937_+|C40-family-peptidase
MSSFLLGRFLHPGVFSLCVLLPLFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGENIRVSRLAEPFWQDHFLGARRILTEETIL
>NZ_CP007491.1|WP_001225679.1|250146_250887_-|murein-L,D-transpeptidase
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>NZ_CP007491.1|WP_000333380.1|249408_250176_+|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>NZ_CP007491.1|WP_000284050.1|248624_249203_+|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>NZ_CP007491.1|WP_000973090.1|245940_248385_-|acyl-CoA-dehydrogenase-FadE
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPFDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAEESRLCSINVDDFDPEELATKPVKLPEKVRKVEAA
>NZ_CP007491.1|WP_000532698.1|245424_245898_+|C-lysozyme-inhibitor
MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>NZ_CP007491.1|WP_001118055.1|244500_245271_-|2-oxoglutaramate-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQNDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAIYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMVALREYREKFPAWQDADEFRLR
>NZ_CP007491.1|WP_000978828.1|242612_243062_+|hypothetical-protein
MMKYLMVLLSLFSGSVLGMGRVNELCGIDSVKTIEIINLPSYVTTLVPLSKEGLNEIYRYKVVVNEISDLYAGKIIDLLQMKYFRKEKYNNIRWGVSIISKGNNKCEIYFDAFGECGSVNGINVCFEKNEMIGWIKKEIPLLSQKIGGL
>NZ_CP007491.1|WP_001284199.1|239080_239563_-|Hcp-family-type-VI-secretion-system-effector
MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYALMHSISRSQNVNHHELIITKPVDKSSPLLAKALSDNEKMAICEFILYRTSKAGIYQPYYKINLSKARISSIDFVTPHAVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ
>NZ_CP007491.1|WP_000952760.1|252927_254667_-|flagellar-biosynthesis-protein-FlhA
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRISDNGDITHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFSYDDITQLHNRLSSMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>NZ_CP007491.1|WP_000207589.1|254611_255397_+|putative-lateral-flagellar-export/assembly-protein-LafU
MTTIKLIVNSVSKSERESIIAALHGQSIFSGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRMR
>NZ_CP007491.1|WP_001226155.1|255467_256523_+|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELHLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
>NZ_CP007491.1|WP_001059874.1|256519_256972_+|GNAT-family-N-acetyltransferase
MNNIQIRNYQPGDFQQLCAIFIRAVMMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFISRIERHIDMLFVDPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQIVKQQHVECRGAWFTNFYMRYKPQH
>NZ_CP007491.1|WP_001295204.1|257704_257845_+|hypothetical-protein
MLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAFIEG
>NZ_CP007491.1|WP_001293003.1|257901_259359_-|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQDILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIKSVGHYWTLLTELLKEIPAK
>NZ_CP007491.1|WP_001291992.1|259619_260078_+|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDNYVVDIPQDTWIEQPWDMGVVFVPPISGR
>NZ_CP007491.1|WP_000189539.1|260169_261414_+|esterase-FrsA
MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDDALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITGWIEKRLC
>NZ_CP007491.1|WP_000174677.1|261471_261873_+|sigma-factor-binding-protein-Crl
MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEPADDFRDEPVKLTA
>NZ_CP007491.1|WP_000749881.1|261911_262967_-|phosphoporin-PhoE
MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007491_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_3

1402523-1402646

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007491_3

>merge|NZ_CP007491|3|1402523-1402646|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP007491|3|3|1402523-1402646|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_001273518.1\|1395257_1397360_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP007491.1\|WP_001297805.1\|1397372_1398011_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP007491.1\|WP_000190982.1\|1410218_1411244_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP007491.1\|WP_000098911.1\|1406526_1407675_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP007491.1\|WP_000102278.1\|1411542_1411632_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP007491.1\|WP_000534291.1\|1402960_1404217_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP007491.1\|WP_001310861.1\|1398074_1398743_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP007491.1\|WP_000269501.1\|1409289_1410222_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP007491.1\|WP_000493947.1\|1405845_1406487_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP007491.1\|WP_001174942.1\|1404257_1405631_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP007491.1\|WP_001182363.1\|1407965_1409177_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP007491.1\|WP_000212657.1\|1402082_1402388_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP007491.1\|WP_001070230.1\|1394610_1395237_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP007491.1\|WP_000528342.1\|1393945_1394155_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP007491.1\|WP_001295403.1\|1391977_1393390_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP007491.1\|WP_000587555.1\|1399528_1400341_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP007491.1\|WP_000701040.1\|1411797_1412967_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP007491.1\|WP_001069997.1\|1398739_1399525_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP007491.1\|WP_000716929.1\|1400352_1401957_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP007491.1\|WP_000007283.1\|1413112_1413694_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_001273518.1\|1395257_1397360_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP007491.1\|WP_001297805.1\|1397372_1398011_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.93584e-120
NZ_CP007491.1\|WP_000190982.1\|1410218_1411244_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP007491.1\|WP_000098911.1\|1406526_1407675_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP007491.1\|WP_000534291.1\|1402960_1404217_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP007491.1\|WP_001310861.1\|1398074_1398743_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	2.09652e-76
NZ_CP007491.1\|WP_000269501.1\|1409289_1410222_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP007491.1\|WP_000493947.1\|1405845_1406487_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP007491.1\|WP_001174942.1\|1404257_1405631_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP007491.1\|WP_001182363.1\|1407965_1409177_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP007491.1\|WP_000212657.1\|1402082_1402388_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP007491.1\|WP_001070230.1\|1394610_1395237_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP007491.1\|WP_000528342.1\|1393945_1394155_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP007491.1\|WP_001295403.1\|1391977_1393390_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP007491.1\|WP_000587555.1\|1399528_1400341_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	9.78241e-175
NZ_CP007491.1\|WP_000701040.1\|1411797_1412967_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP007491.1\|WP_001069997.1\|1398739_1399525_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	5.33298e-163
NZ_CP007491.1\|WP_000716929.1\|1400352_1401957_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP007491.1\|WP_000007283.1\|1413112_1413694_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138

>NZ_CP007491.1|WP_000212657.1|1402082_1402388_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP007491.1|WP_000716929.1|1400352_1401957_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLVVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP007491.1|WP_000587555.1|1399528_1400341_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLAQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP007491.1|WP_001069997.1|1398739_1399525_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSVTDYGEKIYLYCKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP007491.1|WP_001310861.1|1398074_1398743_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP007491.1|WP_001297805.1|1397372_1398011_+|YdhW-family-putative-oxidoreductase-system-protein
MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP007491.1|WP_001273518.1|1395257_1397360_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_CP007491.1|WP_001070230.1|1394610_1395237_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP007491.1|WP_000528342.1|1393945_1394155_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP007491.1|WP_001295403.1|1391977_1393390_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP007491.1|WP_000534291.1|1402960_1404217_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP007491.1|WP_001174942.1|1404257_1405631_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>NZ_CP007491.1|WP_000493947.1|1405845_1406487_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP007491.1|WP_000098911.1|1406526_1407675_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP007491.1|WP_001182363.1|1407965_1409177_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP007491.1|WP_000269501.1|1409289_1410222_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP007491.1|WP_000190982.1|1410218_1411244_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP007491.1|WP_000102278.1|1411542_1411632_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP007491.1|WP_000701040.1|1411797_1412967_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP007491.1|WP_000007283.1|1413112_1413694_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP007491_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_4

2924209-2924725

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

8 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP007491_4

>merge|NZ_CP007491|4|2924209-2924725|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACTGTACGCGGCGAGTTTTAGCGACAGGTCATCCCGGTTTATCCCCGCTGGCGCGGGGAACACGGATCTGCCAGCGCCTCTGCGGGGCGGTAAACCGGTTTATCCCCGCTGGCGCGGGGAACACTACGCCAGCCACCTGCTTCGCCAGCCGTTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACAAAGCACGGAATTTTTACAGCGCGTTAGATCCCGGTTTATCCCCGCTGGCGCGGGGAACACTCACGGTAGCGCCACTGCGCGTCGGTGACGGGCGGTTTATCCCCGCTGGCGCGGGGAACACAACGAACAGGGATTTGTCGGCAGTTTCTTTACCGGTTTATCCCCGCTGGCGCGGGGAACACATAATTCGCAAATCAATATATATTTTGTCCGTCGGTTTATCCCCGCTGGCGCGGGGAACACAATTGCGGATGCTCCCGGAATTGCGCGGGCAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007491|4|1|2924209-2924725|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007491|4|4|2924209-2924725|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007491|4|1|2924209-2924725|CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTACGCGGCGAGTTTTAGCGACAGGTCATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCAGCCACCTGCTTCGCCAGCCGTTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAAGCACGGAATTTTTACAGCGCGTTAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGAACAGGGATTTGTCGGCAGTTTCTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATAATTCGCAAATCAATATATATTTTGTCCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTGCGGATGCTCCCGGAATTGCGCGGGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_000029329.1\|2928487_2929024_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP007491.1\|WP_000372108.1\|2921929_2922838_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP007491.1\|WP_001173673.1\|2919895_2920501_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007491.1\|WP_001219242.1\|2917809_2918289_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP007491.1\|WP_059309200.1\|2916021_2916783_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP007491.1\|WP_000956458.1\|2933573_2933726_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP007491.1\|WP_000568943.1\|2916763_2917813_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP007491.1\|WP_000063176.1\|2924821_2925115_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP007491.1\|WP_000206443.1\|2927420_2928476_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP007491.1\|WP_000085051.1\|2926663_2927410_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP007491.1\|WP_048943256.1\|2920500_2921928_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007491.1\|WP_001246104.1\|2919522_2919846_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP007491.1\|WP_000281446.1\|2926031_2926682_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP007491.1\|WP_001084084.1\|2929020_2930583_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007491.1\|WP_000517476.1\|2919017_2919329_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP007491.1\|WP_000144861.1\|2925111_2926035_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP007491.1\|WP_000246138.1\|2918288_2918999_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP007491.1\|WP_001233970.1\|2930680_2933380_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP007491.1\|WP_000490426.1\|2923089_2924127_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007491.1\|WP_000039842.1\|2933990_2934725_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_000029329.1\|2928487_2929024_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP007491.1\|WP_000372108.1\|2921929_2922838_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP007491.1\|WP_001173673.1\|2919895_2920501_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP007491.1\|WP_001219242.1\|2917809_2918289_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP007491.1\|WP_059309200.1\|2916021_2916783_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	3.55412e-148
NZ_CP007491.1\|WP_000956458.1\|2933573_2933726_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP007491.1\|WP_000568943.1\|2916763_2917813_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP007491.1\|WP_000063176.1\|2924821_2925115_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP007491.1\|WP_000206443.1\|2927420_2928476_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.21697e-155
NZ_CP007491.1\|WP_000085051.1\|2926663_2927410_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.83917e-49
NZ_CP007491.1\|WP_048943256.1\|2920500_2921928_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007491.1\|WP_001246104.1\|2919522_2919846_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP007491.1\|WP_000281446.1\|2926031_2926682_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.0289e-91
NZ_CP007491.1\|WP_001084084.1\|2929020_2930583_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP007491.1\|WP_000517476.1\|2919017_2919329_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP007491.1\|WP_000144861.1\|2925111_2926035_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.67486e-158
NZ_CP007491.1\|WP_000246138.1\|2918288_2918999_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP007491.1\|WP_001233970.1\|2930680_2933380_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.23832e-176
NZ_CP007491.1\|WP_000490426.1\|2923089_2924127_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007491.1\|WP_000039842.1\|2933990_2934725_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.33579e-136

>NZ_CP007491.1|WP_000490426.1|2923089_2924127_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP007491.1|WP_000372108.1|2921929_2922838_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP007491.1|WP_048943256.1|2920500_2921928_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLNLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP007491.1|WP_001173673.1|2919895_2920501_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP007491.1|WP_001246104.1|2919522_2919846_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP007491.1|WP_000517476.1|2919017_2919329_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP007491.1|WP_000246138.1|2918288_2918999_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP007491.1|WP_001219242.1|2917809_2918289_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP007491.1|WP_000568943.1|2916763_2917813_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP007491.1|WP_059309200.1|2916021_2916783_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVGAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP007491.1|WP_000063176.1|2924821_2925115_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP007491.1|WP_000144861.1|2925111_2926035_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP007491.1|WP_000281446.1|2926031_2926682_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELRTGQQLCFNLRANPTICKSGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP007491.1|WP_000085051.1|2926663_2927410_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP007491.1|WP_000206443.1|2927420_2928476_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWAMAEKGTEQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP007491.1|WP_000029329.1|2928487_2929024_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP007491.1|WP_001084084.1|2929020_2930583_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEVEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKMWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRFVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVNLERIMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP007491.1|WP_001233970.1|2930680_2933380_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPRIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAQAMDIKHYWQKALVQAQNALTVFPPKAETAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWLTHVTKTDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQDPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP007491.1|WP_000956458.1|2933573_2933726_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP007491.1|WP_000039842.1|2933990_2934725_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMLEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP007491_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_5

2950424-2950940

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP007491_5

>merge|NZ_CP007491|5|2950424-2950940|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACTCATATACAGCAAACCTTCAGAATGCATTCCGGGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGTCTGCCTCCAGCCCAGCCCTGGATATTTCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGTTCACTCACGCAACGTCTGAGCGCGTTGACGGTTTATCCCCGCTGGCGCGGGGAACTCAGGGCCGCCGCTACCCCAGAAGTGCCACTCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGTATCGTCTCGTTATTGCGCCGCCCCAACTCGGTTTATCCCCGCTGGCGCGGGGAACTCAGTATGCGTTCAATCACTGTCAGGCCTACTTCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGTTGCCCGATGGACACTCCCAGACCATCAGCCGGTTTATCCCCGCTGGCGCGGGGAACTCACTAAACTTAATGATGGCCGTTACAGCGTGGACGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007491|5|5|2950424-2950940|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGGGCCGCCGCTACCCCAGAAGTGCCACTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGTATCGTCTCGTTATTGCGCCGCCCCAACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTATGCGTTCAATCACTGTCAGGCCTACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTTGCCCGATGGACACTCCCAGACCATCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTAAACTTAATGATGGCCGTTACAGCGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007491|5|2|2950424-2950940|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATACAGCAAACCTTCAGAATGCATTCCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGGGCCGCCGCTACCCCAGAAGTGCCACTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGTATCGTCTCGTTATTGCGCCGCCCCAACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTATGCGTTCAATCACTGTCAGGCCTACTTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGTTGCCCGATGGACACTCCCAGACCATCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTAAACTTAATGATGGCCGTTACAGCGTGGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP007491|5|2|2950425-2950940|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACTCA	TATACAGCAAACCTTCAGAATGCATTCCGGGC
GGTTTATCCCCGCTGGCGCGGGGAACTCG	CCGTCTGCCTCCAGCCCAGCCCTGGATATTTC
GGTTTATCCCCGCTGGCGCGGGGAACTCT	GGTTCACTCACGCAACGTCTGAGCGCGTTGAC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GGGCCGCCGCTACCCCAGAAGTGCCACTCCCC
GGTTTATCCCCGCTGGCGCGGGGAACTCG	CGTATCGTCTCGTTATTGCGCCGCCCCAACTC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GTATGCGTTCAATCACTGTCAGGCCTACTTCC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	GTTGCCCGATGGACACTCCCAGACCATCAGCC
GGTTTATCCCCGCTGGCGCGGGGAACTCA	CTAAACTTAATGATGGCCGTTACAGCGTGGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_001324446.1\|2941330_2942191_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP007491.1\|WP_001071648.1\|2956426_2957218_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP007491.1\|WP_001268446.1\|2952243_2953116_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP007491.1\|WP_001164578.1\|2947003_2948281_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP007491.1\|WP_001199979.1\|2951279_2951951_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007491.1\|WP_001324445.1\|2942187_2942967_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP007491.1\|WP_000036723.1\|2953175_2954474_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007491.1\|WP_000109532.1\|2940330_2940591_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP007491.1\|WP_000059312.1\|2944375_2945830_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP007491.1\|WP_001288229.1\|2952089_2952230_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007491.1\|WP_000147666.1\|2942944_2944354_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP007491.1\|WP_000039683.1\|2948307_2949786_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP007491.1\|WP_000226815.1\|2957949_2960184_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP007491.1\|WP_000254738.1\|2957288_2957624_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP007491.1\|WP_001130266.1\|2940607_2941183_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP007491.1\|WP_000210878.1\|2954561_2956199_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007491.1\|WP_000046838.1\|2960231_2961533_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP007491.1\|WP_000021330.1\|2945899_2946685_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP007491.1\|WP_001295150.1\|2939068_2940340_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP007491.1\|WP_000581937.1\|2957623_2957872_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_001324446.1\|2941330_2942191_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.47186e-88
NZ_CP007491.1\|WP_001071648.1\|2956426_2957218_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP007491.1\|WP_001268446.1\|2952243_2953116_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.56011e-100
NZ_CP007491.1\|WP_001164578.1\|2947003_2948281_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.84544e-29
NZ_CP007491.1\|WP_001199979.1\|2951279_2951951_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
NZ_CP007491.1\|WP_001324445.1\|2942187_2942967_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	7.46503e-62
NZ_CP007491.1\|WP_000036723.1\|2953175_2954474_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007491.1\|WP_000109532.1\|2940330_2940591_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.6328e-41
NZ_CP007491.1\|WP_000059312.1\|2944375_2945830_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
NZ_CP007491.1\|WP_000147666.1\|2942944_2944354_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_CP007491.1\|WP_000039683.1\|2948307_2949786_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	9.76816e-108
NZ_CP007491.1\|WP_000226815.1\|2957949_2960184_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP007491.1\|WP_000254738.1\|2957288_2957624_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP007491.1\|WP_001130266.1\|2940607_2941183_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP007491.1\|WP_000210878.1\|2954561_2956199_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007491.1\|WP_000046838.1\|2960231_2961533_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP007491.1\|WP_000021330.1\|2945899_2946685_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14687e-138
NZ_CP007491.1\|WP_001295150.1\|2939068_2940340_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.82789e-125
NZ_CP007491.1\|WP_000581937.1\|2957623_2957872_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>NZ_CP007491.1|WP_000039683.1|2948307_2949786_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNYFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP007491.1|WP_001164578.1|2947003_2948281_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP007491.1|WP_000021330.1|2945899_2946685_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAASCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP007491.1|WP_000059312.1|2944375_2945830_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP007491.1|WP_000147666.1|2942944_2944354_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP007491.1|WP_001324445.1|2942187_2942967_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWRDYLRQRMQP
>NZ_CP007491.1|WP_001324446.1|2941330_2942191_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLIIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP007491.1|WP_001130266.1|2940607_2941183_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP007491.1|WP_000109532.1|2940330_2940591_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP007491.1|WP_001295150.1|2939068_2940340_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP007491.1|WP_001199979.1|2951279_2951951_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007491.1|WP_001288229.1|2952089_2952230_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNNNESKITDAAVNLFIQI
>NZ_CP007491.1|WP_001268446.1|2952243_2953116_+|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIKVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP007491.1|WP_000036723.1|2953175_2954474_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007491.1|WP_000210878.1|2954561_2956199_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP007491.1|WP_001071648.1|2956426_2957218_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP007491.1|WP_000254738.1|2957288_2957624_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP007491.1|WP_000581937.1|2957623_2957872_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP007491.1|WP_000226815.1|2957949_2960184_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP007491.1|WP_000046838.1|2960231_2961533_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVSRHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK

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Crispr_ID: NZ_CP007491_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_6

3401521-3401660

Orphan

Consensus_repeat	Method
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007491_6

>merge|NZ_CP007491|6|3401521-3401660|CRISPRCasFinder
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAAACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAA

>NZ_CP007491|6|6|3401521-3401660|CRISPRCasFinder
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGACACAAA	ACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGT
TGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_000816988.1\|3395863_3396955_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
NZ_CP007491.1\|WP_001045434.1\|3391947_3392532_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP007491.1\|WP_000147576.1\|3401711_3402752_-\|permease	unknown	unknown	gnl\|CDD\|223773
NZ_CP007491.1\|WP_000130392.1\|3408186_3409194_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP007491.1\|WP_000044770.1\|3392611_3393307_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP007491.1\|WP_001136488.1\|3393336_3395853_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP007491.1\|WP_000189314.1\|3404579_3404882_+\|DNA-damage-response-exodeoxyribonuclease-YhbQ	unknown	unknown	gnl\|CDD\|178979
NZ_CP007491.1\|WP_000809262.1\|3396997_3397858_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|184956
NZ_CP007491.1\|WP_001323952.1\|3390791_3391547_+\|galactosamine-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|182064
NZ_CP007491.1\|WP_000908554.1\|3404868_3405372_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP007491.1\|WP_000646033.1\|3400931_3401507_+\|divisome-associated-lipoprotein-YraP	unknown	unknown	gnl\|CDD\|182907
NZ_CP007491.1\|WP_001295551.1\|3402824_3403460_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP007491.1\|WP_000037608.1\|3403587_3404106_+\|protein/nucleic-acid-deglycase	unknown	unknown	gnl\|CDD\|153228
NZ_CP007491.1\|WP_000249160.1\|3397922_3399959_+\|penicillin-binding-protein-activator-LpoA	unknown	unknown	gnl\|CDD\|225649
NZ_CP007491.1\|WP_000449030.1\|3404085_3404529_-\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP007491.1\|WP_001158034.1\|3400331_3400922_+\|DnaA-initiator-associating-protein-DiaA	unknown	unknown	gnl\|CDD\|182811
NZ_CP007491.1\|WP_001295552.1\|3405365_3405890_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP007491.1\|WP_000421305.1\|3406098_3407094_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP007491.1\|WP_001301318.1\|3407102_3407981_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP007491.1\|WP_000246837.1\|3399916_3400312_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|129354

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_000816988.1\|3395863_3396955_+\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	3.34626e-21
NZ_CP007491.1\|WP_001045434.1\|3391947_3392532_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.76746e-31
NZ_CP007491.1\|WP_000147576.1\|3401711_3402752_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	4.38189e-63
NZ_CP007491.1\|WP_000130392.1\|3408186_3409194_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP007491.1\|WP_000044770.1\|3392611_3393307_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	9.16141e-79
NZ_CP007491.1\|WP_001136488.1\|3393336_3395853_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP007491.1\|WP_000189314.1\|3404579_3404882_+\|DNA-damage-response-exodeoxyribonuclease-YhbQ	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	3.58629e-45
NZ_CP007491.1\|WP_000809262.1\|3396997_3397858_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|184956	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional.	0
NZ_CP007491.1\|WP_001323952.1\|3390791_3391547_+\|galactosamine-6-phosphate-isomerase	gnl\|CDD\|182064	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional.	1.51027e-147
NZ_CP007491.1\|WP_000908554.1\|3404868_3405372_-\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	1.31299e-64
NZ_CP007491.1\|WP_000646033.1\|3400931_3401507_+\|divisome-associated-lipoprotein-YraP	gnl\|CDD\|182907	PRK11023, PRK11023, divisome-associated lipoprotein YraP.	1.97056e-117
NZ_CP007491.1\|WP_001295551.1\|3402824_3403460_-\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.89133e-65
NZ_CP007491.1\|WP_000037608.1\|3403587_3404106_+\|protein/nucleic-acid-deglycase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	6.06977e-86
NZ_CP007491.1\|WP_000249160.1\|3397922_3399959_+\|penicillin-binding-protein-activator-LpoA	gnl\|CDD\|225649	COG3107, LppC, Putative lipoprotein [General function prediction only].	6.33924e-141
NZ_CP007491.1\|WP_000449030.1\|3404085_3404529_-\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	2.19601e-100
NZ_CP007491.1\|WP_001158034.1\|3400331_3400922_+\|DnaA-initiator-associating-protein-DiaA	gnl\|CDD\|182811	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional.	5.61903e-143
NZ_CP007491.1\|WP_001295552.1\|3405365_3405890_-\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	6.78212e-85
NZ_CP007491.1\|WP_000421305.1\|3406098_3407094_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.87234e-118
NZ_CP007491.1\|WP_001301318.1\|3407102_3407981_+\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP007491.1\|WP_000246837.1\|3399916_3400312_+\|YraN-family-protein	gnl\|CDD\|129354	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein. the scores for Mycobacterium tuberculosis and Treponema pallidum are low considering the alignment [Hypothetical proteins, Conserved].	3.92681e-63

>NZ_CP007491.1|WP_000646033.1|3400931_3401507_+|divisome-associated-lipoprotein-YraP
MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFIK
>NZ_CP007491.1|WP_001158034.1|3400331_3400922_+|DnaA-initiator-associating-protein-DiaA
MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD
>NZ_CP007491.1|WP_000246837.1|3399916_3400312_+|YraN-family-protein
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS
>NZ_CP007491.1|WP_000249160.1|3397922_3399959_+|penicillin-binding-protein-activator-LpoA
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS
>NZ_CP007491.1|WP_000809262.1|3396997_3397858_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
>NZ_CP007491.1|WP_000816988.1|3395863_3396955_+|fimbrial-protein
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLKANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
>NZ_CP007491.1|WP_001136488.1|3393336_3395853_+|fimbrial-biogenesis-outer-membrane-usher-protein
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYSGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNRNISVGVSGQQWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSVNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
>NZ_CP007491.1|WP_000044770.1|3392611_3393307_+|molecular-chaperone
MSKRTFAVIITLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGTSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDNVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ
>NZ_CP007491.1|WP_001045434.1|3391947_3392532_+|type-1-fimbrial-protein
MNKVTKTAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPVTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGTAATGVGIRIDDAESGNLMPLNAMGNDNTVYQIPADSAGIVNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR
>NZ_CP007491.1|WP_001323952.1|3390791_3391547_+|galactosamine-6-phosphate-isomerase
MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT
>NZ_CP007491.1|WP_000147576.1|3401711_3402752_-|permease
MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGTVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF
>NZ_CP007491.1|WP_001295551.1|3402824_3403460_-|NAD(P)H-binding-protein
MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLTDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE
>NZ_CP007491.1|WP_000037608.1|3403587_3404106_+|protein/nucleic-acid-deglycase
MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>NZ_CP007491.1|WP_000449030.1|3404085_3404529_-|YhbP-family-protein
METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA
>NZ_CP007491.1|WP_000189314.1|3404579_3404882_+|DNA-damage-response-exodeoxyribonuclease-YhbQ
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
>NZ_CP007491.1|WP_000908554.1|3404868_3405372_-|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF
>NZ_CP007491.1|WP_001295552.1|3405365_3405890_-|SCP2-domain-containing-protein
MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC
>NZ_CP007491.1|WP_000421305.1|3406098_3407094_+|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
>NZ_CP007491.1|WP_001301318.1|3407102_3407981_+|U32-family-peptidase
MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
>NZ_CP007491.1|WP_000130392.1|3408186_3409194_+|LLM-class-flavin-dependent-oxidoreductase
MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG

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Crispr_ID: NZ_CP007491_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007491_7

4702498-4702644

Orphan

Consensus_repeat	Method
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007491_7

>merge|NZ_CP007491|7|4702498-4702644|CRISPRCasFinder
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACATTGCCAGATGCGACGCTGTCGCGTCTTATCAGGCCTACGGGTCCGGTGCTCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA

>NZ_CP007491|7|7|4702498-4702644|CRISPRCasFinder
TCTGTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA	TTGCCAGATGCGACGCTGTCGCGTCTTATCAGGCCTACGGGTCCGGTGC
TCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007491.1\|WP_001104443.1\|4694446_4695466_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007491.1\|WP_001128332.1\|4709423_4710743_-\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NZ_CP007491.1\|WP_001059395.1\|4697152_4697656_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007491.1\|WP_000416420.1\|4699098_4701954_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP007491.1\|WP_015364387.1\|4713410_4714430_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP007491.1\|WP_000998700.1\|4710807_4711572_-\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NZ_CP007491.1\|WP_000079650.1\|4697848_4699045_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP007491.1\|WP_001348245.1\|4708358_4709357_-\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NZ_CP007491.1\|WP_000896738.1\|4712843_4713407_+\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NZ_CP007491.1\|WP_001294563.1\|4706778_4708281_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP007491.1\|WP_000002960.1\|4696689_4697106_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP007491.1\|WP_001348242.1\|4693292_4693745_+\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345
NZ_CP007491.1\|WP_001295681.1\|4705535_4706618_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP007491.1\|WP_000012907.1\|4695523_4696528_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP007491.1\|WP_000256659.1\|4692554_4693148_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP007491.1\|WP_000584114.1\|4704435_4705536_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP007491.1\|WP_000036530.1\|4693867_4694446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007491.1\|WP_001197418.1\|4711595_4712627_-\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NZ_CP007491.1\|WP_000786397.1\|4701953_4702397_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP007491.1\|WP_000397144.1\|4702657_4704169_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
NZ_CP007491.1\|WP_015364387.1\|4713410_4714430_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	9.61104e-169
NZ_CP007491.1\|WP_001128332.1\|4709423_4710743_-\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP007491.1\|WP_001059395.1\|4697152_4697656_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.42611e-18
NZ_CP007491.1\|WP_000416420.1\|4699098_4701954_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP007491.1\|WP_000998700.1\|4710807_4711572_-\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NZ_CP007491.1\|WP_000079650.1\|4697848_4699045_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	1.61495e-149
NZ_CP007491.1\|WP_000896738.1\|4712843_4713407_+\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	1.3617e-126
NZ_CP007491.1\|WP_001294563.1\|4706778_4708281_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP007491.1\|WP_000002960.1\|4696689_4697106_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	6.53598e-69
NZ_CP007491.1\|WP_001348242.1\|4693292_4693745_+\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.72624e-69
NZ_CP007491.1\|WP_001295681.1\|4705535_4706618_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP007491.1\|WP_000012907.1\|4695523_4696528_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP007491.1\|WP_000256659.1\|4692554_4693148_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.74823e-10
NZ_CP007491.1\|WP_000584114.1\|4704435_4705536_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP007491.1\|WP_000397144.1\|4702657_4704169_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP007491.1\|WP_001197418.1\|4711595_4712627_-\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NZ_CP007491.1\|WP_000786397.1\|4701953_4702397_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	1.17566e-66
NZ_CP007491.1\|WP_001348245.1\|4708358_4709357_-\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	3.51734e-109

>NZ_CP007491.1|WP_000786397.1|4701953_4702397_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSNPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP007491.1|WP_000416420.1|4699098_4701954_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVKNGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP007491.1|WP_000079650.1|4697848_4699045_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAVGMGTVFFISTKMLHANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL
>NZ_CP007491.1|WP_001059395.1|4697152_4697656_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYDGEVVGGGGIAPLTGSEADICELQKMYFLPAIRGKGLAKKLALMAMDHAHEMGFKRCYLETTAFLTEAIALYEHLGFQHIDYALGCTGHVDCEVRMLRDL
>NZ_CP007491.1|WP_000002960.1|4696689_4697106_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDVVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEEYIDDDDDGVRH
>NZ_CP007491.1|WP_000012907.1|4695523_4696528_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP007491.1|WP_001104443.1|4694446_4695466_+|hypothetical-protein
MNWQAQDYKDFFKDALATTLSTIKQEHLLIMPHVCNEIIPDLLGEEGILEEIDNLSASDDAFTNNKKSNDEINKIKIDLAHILIDSLDDAPVDLSPVIRSMLETFLKSPYMSDVKILEWCFNKSIEYFNAAAKIDYACDVIKNIKSGCDQSKRAEALFSLLDKEPYKNSCKLQGLIWDKLVAYVNDFNLSNQEKSRLILKLFDDVKLLFNEVPVSILVNDIFLKGFFMKQPDFAKWYFYQLLKCYEGEQLYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKMVNELKIRTRMMEVLRDGKINIYNYINEKQLEKLNPPENLRAVIEKWGWKNRTHTA
>NZ_CP007491.1|WP_000036530.1|4693867_4694446_+|hypothetical-protein
MSKISHSDYFHYVASCRNFKPKHDVLNSWCVGINNFSRIAEGQHNKRNILSPKAFLEFLAWIFTLGHVDFSESRNEAGRKMMGNIKSSSYLKKDDGSEIMRFYMNNPEGWEDDIRPVILEVRLTPPSVNGARQGRTAIIFDDVTESGKSIFRFEGTDFETKDESSLLLITNKVLACYQREINNEIALQLNNN
>NZ_CP007491.1|WP_001348242.1|4693292_4693745_+|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQSWLPQELRQAIEHIKANVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP007491.1|WP_000256659.1|4692554_4693148_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQLCATAALAGGAIKTILKE
>NZ_CP007491.1|WP_000397144.1|4702657_4704169_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP007491.1|WP_000584114.1|4704435_4705536_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP007491.1|WP_001295681.1|4705535_4706618_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP007491.1|WP_001294563.1|4706778_4708281_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAEEGTSSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRSDTNGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGVLGSLLGGRRR
>NZ_CP007491.1|WP_001348245.1|4708358_4709357_-|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRVRRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSATPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NZ_CP007491.1|WP_001128332.1|4709423_4710743_-|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLLPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NZ_CP007491.1|WP_000998700.1|4710807_4711572_-|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLRQEGIRAVAAPFNVTHKHEIDTAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NZ_CP007491.1|WP_001197418.1|4711595_4712627_-|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGASEIVCADVSPRSLLLAKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NZ_CP007491.1|WP_000896738.1|4712843_4713407_+|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NZ_CP007491.1|WP_015364387.1|4713410_4714430_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGKLEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPHELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007491_3	3.1\|1402566\|38\|NZ_CP007491\|CRISPRCasFinder	1402566-1402603	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP007491_2	2.1\|252693\|48\|NZ_CP007491\|CRISPRCasFinder	252693-252740	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4089-4136	3	0.938
NZ_CP007491_2	2.1\|252693\|48\|NZ_CP007491\|CRISPRCasFinder	252693-252740	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4088-4135	3	0.938
NZ_CP007491_2	2.1\|252693\|48\|NZ_CP007491\|CRISPRCasFinder	252693-252740	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4088-4135	3	0.938
NZ_CP007491_2	2.1\|252693\|48\|NZ_CP007491\|CRISPRCasFinder	252693-252740	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4088-4135	3	0.938
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31255-31303	6	0.878
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	45716-45747	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	45716-45747	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	29015-29046	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	78292-78323	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	39563-39594	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	KU932021	Escherichia coli plasmid pEC3I, complete sequence	51902-51933	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	18560-18591	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	49240-49271	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	81434-81465	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	28916-28947	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	36182-36213	7	0.781
NZ_CP007491_5	5.2\|2950514\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950514-2950545	32	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	32230-32261	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	45716-45747	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	45716-45747	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	51276-51307	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	29015-29046	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	78292-78323	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	39563-39594	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	KU932021	Escherichia coli plasmid pEC3I, complete sequence	51902-51933	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	18560-18591	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	49240-49271	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	81434-81465	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	28916-28947	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	36182-36213	7	0.781
NZ_CP007491_5	5.10\|2950515\|32\|NZ_CP007491\|PILER-CR	2950515-2950546	32	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	32230-32261	7	0.781
NZ_CP007491_6	6.1\|3401570\|42\|NZ_CP007491\|CRISPRCasFinder	3401570-3401611	42	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30214-30255	7	0.833
NZ_CP007491_4	4.2\|2924299\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924299-2924330	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	532343-532374	8	0.75
NZ_CP007491_4	4.3\|2924360\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924360-2924391	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	148991-149022	8	0.75
NZ_CP007491_4	4.3\|2924360\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924360-2924391	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	530640-530671	8	0.75
NZ_CP007491_4	4.5\|2924482\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924482-2924513	32	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	17977-18008	8	0.75
NZ_CP007491_4	4.5\|2924482\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924482-2924513	32	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	97497-97528	8	0.75
NZ_CP007491_4	4.8\|2924665\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924665-2924696	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	62682-62713	8	0.75
NZ_CP007491_4	4.8\|2924665\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924665-2924696	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1222106-1222137	8	0.75
NZ_CP007491_4	4.8\|2924665\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924665-2924696	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2467671-2467702	8	0.75
NZ_CP007491_4	4.8\|2924665\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924665-2924696	32	NC_008759	Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence	12670-12701	8	0.75
NZ_CP007491_5	5.3\|2950575\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950575-2950606	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1417960-1417991	8	0.75
NZ_CP007491_5	5.11\|2950576\|32\|NZ_CP007491\|PILER-CR	2950576-2950607	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1417960-1417991	8	0.75
NZ_CP007491_6	6.1\|3401570\|42\|NZ_CP007491\|CRISPRCasFinder	3401570-3401611	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24899-24940	8	0.81
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	275-323	8	0.837
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14152-14200	8	0.837
NZ_CP007491_4	4.2\|2924299\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924299-2924330	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35771	9	0.719
NZ_CP007491_4	4.3\|2924360\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924360-2924391	32	NZ_CP036297	Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence	14953-14984	9	0.719
NZ_CP007491_4	4.3\|2924360\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924360-2924391	32	NZ_CP036288	Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence	14983-15014	9	0.719
NZ_CP007491_4	4.3\|2924360\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924360-2924391	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	3454-3485	9	0.719
NZ_CP007491_4	4.5\|2924482\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924482-2924513	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	405875-405906	9	0.719
NZ_CP007491_6	6.1\|3401570\|42\|NZ_CP007491\|CRISPRCasFinder	3401570-3401611	42	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24786-24827	9	0.786
NZ_CP007491_4	4.5\|2924482\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924482-2924513	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2248362-2248393	10	0.688
NZ_CP007491_4	4.7\|2924604\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924604-2924635	32	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	244686-244717	10	0.688
NZ_CP007491_4	4.7\|2924604\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924604-2924635	32	GU075905	Prochlorococcus phage P-HM2, complete genome	78536-78567	10	0.688
NZ_CP007491_4	4.8\|2924665\|32\|NZ_CP007491\|PILER-CR,CRISPRCasFinder,CRT	2924665-2924696	32	NC_011987	Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence	86181-86212	10	0.688
NZ_CP007491_5	5.8\|2950880\|32\|NZ_CP007491\|CRISPRCasFinder,CRT	2950880-2950911	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	51062-51093	10	0.688
NZ_CP007491_5	5.16\|2950881\|32\|NZ_CP007491\|PILER-CR	2950881-2950912	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	51062-51093	10	0.688
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208985-209033	10	0.796
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219479-219527	10	0.796
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	61920-61968	10	0.796
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210313-210361	10	0.796
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191268-191316	10	0.796
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	6786-6834	11	0.776
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14243-14291	11	0.776
NZ_CP007491_7	7.1\|4702547\|49\|NZ_CP007491\|CRISPRCasFinder	4702547-4702595	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87119-87167	12	0.755

1. spacer 3.1|1402566|38|NZ_CP007491|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

2. spacer 2.1|252693|48|NZ_CP007491|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

3. spacer 2.1|252693|48|NZ_CP007491|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

4. spacer 2.1|252693|48|NZ_CP007491|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

5. spacer 2.1|252693|48|NZ_CP007491|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.938

tttacgccgcatccggcggttatgcgcagatgcctgatgcgacgctga	CRISPR spacer
tttatgccgcatccggcagttatgcgcagatgcctgatgcgacgctgg	Protospacer
****.************.*****************************.

6. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 6, identity: 0.878

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc--	CRISPR spacer
atgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 **** ********************************.*  *** ***

7. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

8. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

9. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

10. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

11. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

12. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

13. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

14. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

15. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

16. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

17. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

18. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

19. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

20. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

21. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

22. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

23. spacer 5.2|2950514|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

24. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

25. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

26. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

27. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

28. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

29. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

30. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

31. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NC_018995 (Escherichia coli plasmid pHUSEC41-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

32. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_CP053235 (Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

33. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

34. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to KU932021 (Escherichia coli plasmid pEC3I, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

35. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_CP024154 (Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

36. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

37. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

38. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_LR213460 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

39. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

40. spacer 5.10|2950515|32|NZ_CP007491|PILER-CR matches to NZ_MH618673 (Escherichia coli strain 838B plasmid p838B-R, complete sequence) position: , mismatch: 7, identity: 0.781

--gccgtctgcctccagcccagccctggatattt	CRISPR spacer
tggcc--ctgcctgcagctcagccctggataacg	Protospacer
  ***  ****** ****.************ .

41. spacer 6.1|3401570|42|NZ_CP007491|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.833

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
gcgtaggccagataaggcgtttacgccgcatccggcatttgt	Protospacer
.******.*********.****************.*  .***

42. spacer 4.2|2924299|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
ggatcggccagcgcatctgcgggaggatgatg	Protospacer
***** ******** ********. *.*.*

43. spacer 4.3|2924360|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ttccgcagccgcctccttcgccagccgtaccc	Protospacer
* *  *****.*** ************* *

44. spacer 4.3|2924360|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ctggcccatcacctgcttcgccacctgttcgg	Protospacer
.  *** ..************** *.******

45. spacer 4.5|2924482|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
agttggtagcggccctgcgcgtcggtgacgct	Protospacer
   .******* * ****************

46. spacer 4.5|2924482|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
ttgaagaagcgcgactgcgcgtcggtgacgtc	Protospacer
*.. .* ***** *****************

47. spacer 4.8|2924665|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
gattgcggatgctgccggcattgcgataggga	Protospacer
.************ **** ******  .* .*

48. spacer 4.8|2924665|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
tgatggcgctgctcacggaattgcgcgcgcaa	Protospacer
 . **  * ***** ************ ****

49. spacer 4.8|2924665|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
tgatggcgctgctcacggaattgcgcgcgcaa	Protospacer
 . **  * ***** ************ ****

50. spacer 4.8|2924665|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NC_008759 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence) position: , mismatch: 8, identity: 0.75

aattgcggatgctcccggaa-----ttgcgcgggcaa	CRISPR spacer
aaatgcggatgctcccggaaatgagtttcacg-----	Protospacer
** *****************     ** *.**

51. spacer 5.3|2950575|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggttcactcacgcaacgtctgagcgcgttga	CRISPR spacer
cggggtaatcacgcaacgtccgaccgcgttgt	Protospacer
.**  .* ************.** *******

52. spacer 5.11|2950576|32|NZ_CP007491|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggttcactcacgcaacgtctgagcgcgttga	CRISPR spacer
cggggtaatcacgcaacgtccgaccgcgttgt	Protospacer
.**  .* ************.** *******

53. spacer 6.1|3401570|42|NZ_CP007491|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.81

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
ttgtaggtcggataaggcgtttacgccgcatccgacatcaat	Protospacer
 .*******.*******.******************  * .*

54. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 8, identity: 0.837

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc-	CRISPR spacer
atgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 **** ********************************... *** *.*

55. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 8, identity: 0.837

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc--	CRISPR spacer
acgcctgatgcgtcgctgtcgcgtcttatcaggcctacag--ccgttgccg	Protospacer
 .*** ****** *************************.*  *** ***

56. spacer 4.2|2924299|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
gtcgctgccagcgcctcggcgaggcggtctcg	Protospacer
*   ************* ***.******

57. spacer 4.3|2924360|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036297 (Planctomycetes bacterium Pla86 plasmid pPla86_1, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
cacgcaagccacctgcatcgccagctgccgct	Protospacer
.**** ********** ********.*..

58. spacer 4.3|2924360|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036288 (Planctomycetes bacterium Pla133 plasmid pPla133_1, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
cacgcaagccacctgcatcgccagctgccgct	Protospacer
.**** ********** ********.*..

59. spacer 4.3|2924360|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719

tacgccagccacctgcttcgccagccgttcgg	CRISPR spacer
ctcggcagccacctgctgcgccagctgcgcaa	Protospacer
. ** ************ *******.*. *..

60. spacer 4.5|2924482|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
ttgaagaagcgcgactgcgcgtcagtgacgtc	Protospacer
*.. .* ***** **********.******

61. spacer 6.1|3401570|42|NZ_CP007491|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.786

acgtaggtcagataaggtgtttacgccgcatccgactgctgt	CRISPR spacer
ttgtaggtcggataaggcgtttacgccgcatccgacatcaac	Protospacer
 .*******.*******.******************  * ..

62. spacer 4.5|2924482|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

tcacggtagcgccactgcgcgtcggtgacggg	CRISPR spacer
gggacgtcgcgccactgggcgtcggtgatgtc	Protospacer
  .  ** ********* **********.*

63. spacer 4.7|2924604|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ataattcgcaaatcaatatatattttgtccgt	CRISPR spacer
tattttcggaaatcaatctatattttgcctca	Protospacer
    **** ******** *********.*.

64. spacer 4.7|2924604|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 10, identity: 0.688

ataattcgcaaatcaatatatattttgtccgt	CRISPR spacer
ccagaagtaaaatcaatatataatttttccgt	Protospacer
 .*.     ************* *** *****

65. spacer 4.8|2924665|32|NZ_CP007491|PILER-CR,CRISPRCasFinder,CRT matches to NC_011987 (Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence) position: , mismatch: 10, identity: 0.688

aattgcggatgctcccggaattgcgcgggcaa	CRISPR spacer
cccagcggatgctcctcgaattgcgcggtagc	Protospacer
  . ***********. ***********  .

66. spacer 5.8|2950880|32|NZ_CP007491|CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

actaaacttaatgatggccgttacagcgtgga	CRISPR spacer
gagtaacttaatgatgggcgtcacagcagcgg	Protospacer
.   ************* ***.*****.  *.

67. spacer 5.16|2950881|32|NZ_CP007491|PILER-CR matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

actaaacttaatgatggccgttacagcgtgga	CRISPR spacer
gagtaacttaatgatgggcgtcacagcagcgg	Protospacer
.   ************* ***.*****.  *.

68. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

69. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

70. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacg--ggtccggtgc	CRISPR spacer
atgccagatgcgacgctggcgcgtcttatctggcctacgaagggctaac--	Protospacer
 ***************** *********** ********  ** *....

71. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

72. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc----	CRISPR spacer
atgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
 **** ************ *******************    **. **.

73. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.776

ttgccagatgcgacgctgtcgcgtcttatcaggcctac--gggtccggtgc	CRISPR spacer
atgccagatgcgacgctgacgcgtcttatctggcctacaaagggctaac--	Protospacer
 ***************** *********** *******  .** *....

74. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc	CRISPR spacer
gcgcctgatgcgccgctgtcgcgtcttatcaggcctacaaatcgtttcc	Protospacer
 .*** ****** *************************...**   * *

75. spacer 7.1|4702547|49|NZ_CP007491|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

ttgccagatgcgacgctgtcgcgtcttatcaggcctacgggtccggtgc	CRISPR spacer
atgcctgatgcgacgctgccgcgtcttatcaggcctacaaaatcaatcg	Protospacer
 **** ************.*******************... .*..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

252112 : 344220

102

Shigella_phage(45.0%)

integrase,tail,plate,capsid,head,terminase,holin,transposase,portal,protease

attL 265768:265826|attR 307483:307541

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000006256.1\|252112_252610_+\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
WP_000952760.1\|252927_254667_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_000207589.1\|254611_255397_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_001226155.1\|255467_256523_+	DNA polymerase IV	NA	NA	NA	NA
WP_001059874.1\|256519_256972_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001295204.1\|257704_257845_+	hypothetical protein	NA	NA	NA	NA
WP_001293003.1\|257901_259359_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_001291992.1\|259619_260078_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_000189539.1\|260169_261414_+	esterase FrsA	NA	NA	NA	NA
WP_000174677.1\|261471_261873_+	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000749881.1\|261911_262967_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.7e-118	60.9
WP_001285288.1\|263254_264358_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893260.1\|264369_265623_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-95	47.0
265768:265826	attL	NA	NA	NA	NA
WP_000051887.1\|265827_266991_-\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_000206810.1\|267217_267523_-	hypothetical protein	U5P0J0	Shigella_phage	2.2e-49	97.0
WP_001242717.1\|267522_267885_-	phage protein	K7PH61	Enterobacteria_phage	2.0e-65	99.1
WP_000008183.1\|267875_268412_-	5'-deoxynucleotidase	K7PKJ9	Enterobacteria_phage	3.7e-100	98.9
WP_059309162.1\|268539_269364_-	DUF2303 family protein	K7PJQ6	Enterobacteria_phage	5.6e-148	98.5
WP_000135680.1\|269429_269792_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000917896.1\|270392_270689_-	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
WP_059309163.1\|271139_271424_-	hypothetical protein	A0A2H4FNB7	Salmonella_phage	2.1e-14	48.9
WP_000135661.1\|271491_271839_-	hypothetical protein	NA	NA	NA	NA
WP_023145979.1\|271854_272559_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	2.2e-68	59.0
WP_000098317.1\|272666_272930_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.1e-09	51.7
WP_059309164.1\|272958_273510_+	hypothetical protein	K7PGU3	Enterobacteria_phage	1.9e-96	96.7
WP_001250269.1\|273685_273865_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104969.1\|273854_274796_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	3.9e-153	99.7
WP_077871628.1\|274792_275287_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	9.6e-87	98.8
WP_000066917.1\|275286_275940_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_000210154.1\|275936_276263_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	2.7e-53	99.1
WP_000767124.1\|276259_276649_+	RusA family crossover junction endodeoxyribonuclease	Q8SBE7	Shigella_phage	7.1e-69	100.0
WP_001061380.1\|276668_277478_+	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	2.8e-152	98.9
WP_001433852.1\|277485_278475_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-195	99.7
WP_001205457.1\|278493_278838_+	antitermination protein Q	A0A0P0ZCW0	Stx2-converting_phage	7.2e-57	89.4
WP_001542079.1\|278863_279478_-	hypothetical protein	A0A2D1GNI4	Pseudomonas_phage	2.2e-32	35.9
WP_125282403.1\|279481_279826_-	hypothetical protein	NA	NA	NA	NA
WP_000907077.1\|279841_280591_-	TIGR04255 family protein	NA	NA	NA	NA
WP_001120496.1\|280991_281318_+\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	1.2e-56	99.1
WP_001197764.1\|281321_281798_+	glycoside hydrolase family 104 protein	S5FV07	Shigella_phage	1.7e-85	95.6
WP_001367630.1\|281781_282174_+	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	5.7e-50	82.9
WP_000651448.1\|282420_282741_+	hypothetical protein	NA	NA	NA	NA
WP_001135203.1\|282836_283187_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	1.4e-63	97.4
WP_059309166.1\|283312_283807_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	1.5e-87	98.8
WP_122986317.1\|284040_285537_+\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	9.7e-300	99.6
WP_000605604.1\|285548_285731_+	hypothetical protein	M1FJ83	Enterobacteria_phage	1.7e-25	100.0
WP_059309167.1\|285730_286972_+\|portal	phage portal protein	U5P411	Shigella_phage	1.0e-241	99.3
WP_001193634.1\|286949_287600_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	3.6e-118	99.1
WP_059309168.1\|287614_288820_+\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	1.6e-223	99.3
WP_000601360.1\|288869_289070_+	hypothetical protein	S5FNU1	Shigella_phage	3.8e-26	97.0
WP_000927711.1\|289072_289396_+\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
WP_024215340.1\|289392_289803_+\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	1.7e-73	97.1
WP_024215338.1\|289777_290284_+	hypothetical protein	M1FPE2	Enterobacteria_phage	8.9e-80	89.9
WP_059309169.1\|290280_290841_+	hypothetical protein	U5P4H6	Shigella_phage	7.5e-104	98.4
WP_000497751.1\|290849_291020_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_059309170.1\|291003_292500_+\|tail	phage tail sheath subtilisin-like domain-containing protein	M1FN90	Enterobacteria_phage	1.1e-274	99.8
WP_000090998.1\|292499_292856_+\|tail	phage tail tube protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_000661047.1\|292855_293125_+\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
WP_059309171.1\|293266_295102_+\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	2.9e-306	99.3
WP_059309172.1\|295162_296491_+	DNA circularization N-terminal domain-containing protein	Q8SBG8	Shigella_phage	1.6e-245	98.6
WP_000999503.1\|296487_297567_+\|plate	baseplate protein	U5P0H6	Shigella_phage	3.4e-206	99.7
WP_001259082.1\|297566_298115_+\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	1.5e-96	98.9
WP_059309173.1\|298114_298540_+	phage GP46 family protein	U5P0R9	Shigella_phage	3.7e-79	97.9
WP_000785342.1\|298526_299585_+\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	3.1e-199	98.9
WP_000383549.1\|299575_300160_+	YmfQ family protein	O22003	Shigella_phage	1.8e-113	99.5
WP_015364405.1\|300163_300814_+	hypothetical protein	M1FN94	Enterobacteria_phage	7.9e-65	65.1
WP_000376429.1\|300817_301237_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	5.0e-36	54.4
WP_001030519.1\|301208_301811_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.1e-97	88.5
WP_021574459.1\|301810_302344_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	4.1e-59	69.1
WP_015364430.1\|302373_302928_+	site-specific DNA recombinase	A0A0F7LA37	Escherichia_phage	1.8e-86	86.7
WP_059309174.1\|303270_303768_-	hypothetical protein	NA	NA	NA	NA
WP_015364432.1\|304155_304260_+	hypothetical protein	NA	NA	NA	NA
WP_001104032.1\|304366_307120_-	hypothetical protein	A0A1B1IUG5	uncultured_Mediterranean_phage	3.3e-27	26.0
WP_001111345.1\|307654_308065_-	hypothetical protein	NA	NA	NA	NA
307483:307541	attR	NA	NA	NA	NA
WP_048943132.1\|308043_309000_-	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA
WP_000667031.1\|309009_311208_-	aldehyde oxidoreductase molybdenum-binding subunit PaoC	A0A0P0I429	Acinetobacter_phage	1.1e-38	25.8
WP_000643336.1\|311204_312161_-	aldehyde oxidoreductase FAD-binding subunit PaoB	NA	NA	NA	NA
WP_000070694.1\|312157_312847_-	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_001019920.1\|313264_313879_+	YagU family protein	NA	NA	NA	NA
WP_001305432.1\|314769_315480_-	fimbrial chaperone EcpE	NA	NA	NA	NA
WP_001323478.1\|315448_317092_-	fimbrial adhesin EcpD	NA	NA	NA	NA
WP_001131091.1\|317081_319607_-	fimbrial usher EcpC	NA	NA	NA	NA
WP_000716398.1\|319618_320287_-	fimbrial chaperone EcpB	NA	NA	NA	NA
WP_000730974.1\|320344_320932_-	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_024179291.1\|321006_321549_-	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA
WP_001147279.1\|322371_322599_+	hypothetical protein	NA	NA	NA	NA
WP_000866436.1\|322633_322774_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_000803998.1\|322773_323037_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000662258.1\|323400_323502_-	hypothetical protein	NA	NA	NA	NA
WP_000020228.1\|324616_328867_+	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_000621009.1\|329006_329858_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001306921.1\|330448_331042_-	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000474091.1\|331053_331290_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001046317.1\|331398_332724_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
WP_000339586.1\|332949_333804_+	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA
WP_001102099.1\|334331_335051_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000023927.1\|335061_336489_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001323770.1\|336481_337177_+	lactate utilization protein C	NA	NA	NA	NA
WP_001209100.1\|337419_338088_-	hypothetical protein	NA	NA	NA	NA
WP_001159094.1\|338300_339971_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_000089055.1\|339984_341457_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001299022.1\|341470_342058_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_000131044.1\|342186_344220_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4

DBSCAN-SWA_2

567847 : 580287

Enterobacteria_phage(43.75%)

lysis,integrase,holin

attL 567788:567834|attR 589322:589368

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
567788:567834	attL	NA	NA	NA	NA
WP_001298992.1\|567847_569011_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
WP_000206733.1\|569237_569543_-	hypothetical protein	U5P0J0	Shigella_phage	3.4e-50	99.0
WP_001242748.1\|569542_569905_-	hypothetical protein	U5P092	Shigella_phage	1.0e-66	99.2
WP_000008200.1\|569895_570432_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.3e-101	100.0
WP_000081308.1\|570559_571384_-	DUF2303 family protein	U5P439	Shigella_phage	5.0e-149	99.6
WP_000135682.1\|571449_571812_-	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000453587.1\|571909_572455_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_000881608.1\|573019_573202_-	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|573408_573735_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000738425.1\|574215_574509_+	increased serum survival lipoprotein Iss	C6ZCX3	Enterobacteria_phage	1.6e-44	91.8
WP_001228695.1\|574599_574782_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000992107.1\|574998_575532_-	lysozyme	K7PLY1	Enterobacteria_phage	1.1e-99	95.5
WP_000370549.1\|575637_575910_+	hypothetical protein	NA	NA	NA	NA
WP_000250557.1\|575875_576220_-	YdfR family protein	K7PGU6	Enterobacteria_phage	3.5e-35	90.5
WP_000284486.1\|576224_576440_-\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	1.0e-32	95.8
WP_077249175.1\|577533_578598_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.0e-202	98.0
WP_000917724.1\|578744_578948_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000357056.1\|579267_580287_+	hypothetical protein	A0A0R6PIZ6	Moraxella_phage	2.4e-39	32.5
589322:589368	attR	NA	NA	NA	NA

DBSCAN-SWA_3

817436 : 836522

Enterobacteria_phage(62.96%)

integrase,tail,terminase,lysis,transposase,protease

attL 808937:808951|attR 846228:846242

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
808937:808951	attL	NA	NA	NA	NA
WP_000533642.1\|817436_818507_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
WP_001303849.1\|818484_818703_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000545745.1\|818742_818910_-	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
WP_088895425.1\|819182_820410_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000208005.1\|820730_821528_-	DUF550 domain-containing protein	A0A075B8H2	Enterobacteria_phage	5.7e-49	41.1
WP_000582229.1\|821538_822294_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	5.5e-142	92.4
WP_001289862.1\|822295_822703_-	ead/Ea22-like family protein	A0A125RPT9	Escherichia_phage	3.1e-67	97.0
WP_000763386.1\|822699_822921_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	6.4e-35	98.6
WP_000188870.1\|823019_823235_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548531.1\|823311_823503_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_072216179.1\|823475_823661_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.6e-26	95.1
WP_000186798.1\|823657_824338_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	1.3e-131	98.2
WP_000372938.1\|824527_824680_-	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	2.4e-20	98.0
WP_001198861.1\|824648_824813_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000065371.1\|824885_825254_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	4.5e-65	99.2
WP_000213968.1\|825436_825637_-	antirestriction Ral family protein	A0A0K2FJE6	Enterobacteria_phage	2.4e-33	98.5
WP_029403297.1\|826152_827235_-	porin OmpC	Q1MVN1	Enterobacteria_phage	4.4e-161	78.4
WP_000839596.1\|827824_828040_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135294.1\|828039_828537_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	1.9e-90	97.6
WP_012738274.1\|828753_828936_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	1.7e-17	100.0
WP_000738492.1\|829026_829320_-	serum resistance lipoprotein Bor	K7PL54	Enterobacteria_phage	4.0e-48	100.0
WP_001403557.1\|829610_830021_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	9.4e-72	99.3
WP_001031427.1\|830306_830513_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	5.8e-30	100.0
WP_001421937.1\|830677_830872_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	8.7e-28	100.0
WP_000453576.1\|831260_831806_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.7e-95	99.4
WP_001700483.1\|831780_832884_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	7.8e-214	99.1
WP_024179294.1\|834311_836522_+\|tail	tail fiber domain-containing protein	K7PGT9	Enterobacteria_phage	7.7e-237	57.6
846228:846242	attR	NA	NA	NA	NA

DBSCAN-SWA_4

920684 : 929266

Salmonella_phage(84.62%)

integrase

attL 915704:915716|attR 922560:922572

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
915704:915716	attL	NA	NA	NA	NA
WP_000290933.1\|920684_921737_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.6e-107	57.3
WP_001321204.1\|921923_922115_-	hypothetical protein	A0A0R6PIH8	Moraxella_phage	4.0e-09	68.2
WP_001047324.1\|922130_922700_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	4.2e-38	42.9
922560:922572	attR	NA	NA	NA	NA
WP_001247707.1\|922825_923047_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|923079_923589_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956182.1\|923596_923797_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_000963472.1\|923760_924102_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.3e-55	98.2
WP_001244230.1\|924169_924403_+	DUF2732 family protein	E5G6L6	Salmonella_phage	1.1e-32	97.4
WP_000752619.1\|924402_924630_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.5e-36	98.7
WP_000104150.1\|924626_925481_+	DNA adenine methylase	E5G6L8	Salmonella_phage	7.5e-148	90.5
WP_001420002.1\|925486_926308_+	hypothetical protein	A0A0M4RCP6	Salmonella_phage	1.1e-122	75.7
WP_001109970.1\|926307_928680_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.2
WP_001154433.1\|928833_929022_+	hypothetical protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
WP_001217579.1\|929032_929266_+	DinI family protein	E5G6M1	Salmonella_phage	1.0e-35	98.7

DBSCAN-SWA_5

1476100 : 1530178

Enterobacteria_phage(33.33%)

tail,terminase,lysis,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260840.1\|1476100_1476922_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|1477021_1477105_-	hypothetical protein	NA	NA	NA	NA
WP_000743951.1\|1477197_1477533_-	acid shock protein	NA	NA	NA	NA
WP_000091819.1\|1477929_1479183_-	MFS transporter	NA	NA	NA	NA
WP_001019530.1\|1479289_1480183_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225276.1\|1480317_1481538_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919231.1\|1481662_1482358_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_071606760.1\|1482310_1483603_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
WP_000148710.1\|1483761_1484376_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_000526490.1\|1484418_1485273_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213028.1\|1485274_1485892_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_001342404.1\|1485902_1488326_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	9.8e-209	48.6
WP_000041556.1\|1488386_1490813_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.7e-214	49.0
WP_001307224.1\|1491011_1491317_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001321287.1\|1491424_1492135_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138581.1\|1492137_1492698_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705211.1\|1492732_1493074_-	DUF1283 family protein	NA	NA	NA	NA
WP_000598292.1\|1493208_1493535_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_001295394.1\|1493740_1494955_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836058.1\|1494966_1495986_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001389342.1\|1496043_1496172_+	hypothetical protein	NA	NA	NA	NA
WP_001459782.1\|1496173_1497454_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	2.3e-156	62.6
WP_000005552.1\|1497488_1497740_-	excisionase family protein	S4TND0	Salmonella_phage	2.2e-15	50.0
WP_041520819.1\|1497812_1500284_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.2e-57	56.1
WP_001083276.1\|1500377_1500569_-\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000854559.1\|1500565_1500754_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_000344950.1\|1501240_1501816_-	hypothetical protein	NA	NA	NA	NA
WP_000379589.1\|1501817_1501973_-	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_048943200.1\|1502165_1502573_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	3.3e-24	46.2
WP_000476993.1\|1502650_1502878_+	transcriptional regulator	NA	NA	NA	NA
WP_023567544.1\|1502861_1503383_+	phage regulatory protein CII	NA	NA	NA	NA
WP_000054505.1\|1503363_1504329_+	hypothetical protein	U5P0A0	Shigella_phage	2.9e-55	61.2
WP_001151189.1\|1504369_1504771_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.4e-64	95.5
WP_022645725.1\|1504970_1505993_+	hypothetical protein	Q858S2	Enterobacteria_phage	2.5e-105	62.4
WP_000887491.1\|1507007_1507220_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
WP_000980999.1\|1507436_1507688_+	hypothetical protein	NA	NA	NA	NA
WP_032140164.1\|1507754_1508033_+	hypothetical protein	A0A077KB22	Edwardsiella_phage	6.1e-06	37.1
WP_023567547.1\|1508034_1509084_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-108	54.3
WP_000904112.1\|1509096_1509471_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	8.4e-35	62.7
WP_023567548.1\|1509467_1510289_+	antitermination protein	K7PKS8	Enterobacteria_phage	4.5e-81	54.0
WP_000562553.1\|1511191_1511323_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_000506934.1\|1511689_1512118_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_072162994.1\|1512289_1512664_+	tolA family protein	NA	NA	NA	NA
WP_000839561.1\|1512915_1513131_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	5.9e-33	95.8
WP_000192451.1\|1513135_1513480_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.2e-37	95.2
WP_000370545.1\|1513445_1513718_-	hypothetical protein	NA	NA	NA	NA
WP_001101168.1\|1513823_1514366_+	lysozyme	Q08J98	Stx2-converting_phage	3.0e-94	87.8
WP_059309187.1\|1514362_1514899_+	hypothetical protein	K7PHH7	Enterobacteria_phage	3.2e-72	82.9
WP_059309188.1\|1515067_1515760_-	hypothetical protein	NA	NA	NA	NA
WP_000373426.1\|1516331_1516826_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	2.2e-83	99.4
WP_001700320.1\|1516825_1518928_+\|terminase	phage terminase large subunit family protein	K7PH40	Enterobacteria_phage	0.0e+00	99.9
WP_001072975.1\|1518924_1519137_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_077688660.1\|1519064_1520645_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	2.4e-288	99.4
WP_000090847.1\|1521773_1522376_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.8e-87	85.1
WP_048943199.1\|1522436_1525916_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.5
WP_032236520.1\|1525983_1526583_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	1.7e-106	94.5
WP_071886289.1\|1526647_1530178_+\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	1.9e-11	35.5

DBSCAN-SWA_6

2291137 : 2299446

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001374182.1\|2291137_2293138_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
WP_001295429.1\|2293262_2293724_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001295430.1\|2293764_2294235_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_059309194.1\|2294281_2295001_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2294997_2296683_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|2296904_2297636_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|2297695_2297803_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2297783_2298515_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569361.1\|2298519_2299446_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_7

2903600 : 2916783

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272924.1\|2903600_2906162_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_001141340.1\|2906267_2906924_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.0e-49	46.3
WP_001297141.1\|2906974_2907742_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
WP_000847985.1\|2907937_2908846_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590392.1\|2908842_2910105_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
WP_001278994.1\|2910101_2910740_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001136918.1\|2910744_2911521_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_000104456.1\|2911609_2912974_+	GntP family transporter	NA	NA	NA	NA
WP_048943255.1\|2913067_2914060_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	4.6e-32	37.6
WP_001272592.1\|2914122_2915262_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|2915401_2916028_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_059309200.1\|2916021_2916783_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.9e-58	48.0

DBSCAN-SWA_8

4376189 : 4424407

Enterobacteria_phage(43.64%)

tail,integrase,capsid,head,terminase,lysis,portal,tRNA

attL 4408423:4408437|attR 4430293:4430307

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001535325.1\|4376189_4376771_+	SocA family protein	A0A139ZPG5	Marinitoga_camini_virus	8.8e-07	29.6
WP_000900143.1\|4376776_4377238_+	hypothetical protein	NA	NA	NA	NA
WP_001093914.1\|4377271_4377544_-	pyocin activator PrtN family protein	S5MQM5	Escherichia_phage	5.7e-41	96.6
WP_001061348.1\|4377580_4378153_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.2e-109	99.5
WP_000206745.1\|4378152_4378962_-	hypothetical protein	Q8HAA7	Salmonella_phage	3.3e-76	61.8
WP_001565177.1\|4378961_4379324_-	phage protein	U5P092	Shigella_phage	1.5e-65	97.5
WP_000008210.1\|4379314_4379851_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	9.7e-101	99.4
WP_001569327.1\|4379978_4380803_-	DUF2303 family protein	U5P439	Shigella_phage	1.7e-149	99.3
WP_000135691.1\|4380868_4381231_-	hypothetical protein	Q8SBF8	Shigella_phage	1.2e-59	98.3
WP_001513551.1\|4381799_4382294_+	hypothetical protein	NA	NA	NA	NA
WP_000859462.1\|4382636_4383311_-	LexA family transcriptional repressor	Q8SBF6	Shigella_phage	1.2e-132	100.0
WP_000649477.1\|4383401_4383602_+	helix-turn-helix domain-containing protein	U5P445	Shigella_phage	7.9e-32	100.0
WP_039268521.1\|4383645_4384197_+	hypothetical protein	Q8SBF4	Shigella_phage	9.9e-101	99.5
WP_059309219.1\|4384193_4385030_+	ash family protein	Q8SBF3	Shigella_phage	3.7e-139	92.4
WP_047668166.1\|4385022_4385259_+	hypothetical protein	A0A291AX25	Escherichia_phage	8.7e-38	97.4
WP_000061529.1\|4385255_4386074_+	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	1.8e-122	100.0
WP_074014899.1\|4386070_4386565_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	4.3e-87	98.8
WP_000066917.1\|4386564_4387218_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_000210154.1\|4387214_4387541_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	2.7e-53	99.1
WP_000767114.1\|4387537_4387927_+	RusA family crossover junction endodeoxyribonuclease	K7PH72	Enterobacteria_phage	4.6e-68	99.2
WP_001532217.1\|4387946_4388744_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.6e-150	99.2
WP_071887085.1\|4388751_4389741_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.4e-193	99.1
WP_085949407.1\|4389755_4390124_+	antitermination protein Q	A5LH77	Enterobacteria_phage	9.4e-55	87.5
WP_001208502.1\|4390159_4390609_-	hypothetical protein	A5LH78	Enterobacteria_phage	8.0e-24	43.8
WP_001446998.1\|4390630_4391572_-	hypothetical protein	A5LH79	Enterobacteria_phage	5.0e-68	44.2
WP_000917724.1\|4391840_4392044_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799656.1\|4392194_4393247_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.7e-208	100.0
WP_000839597.1\|4393314_4393530_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	2.6e-33	100.0
WP_059309221.1\|4393529_4394027_+	lysozyme RrrD	A0A291AWW2	Escherichia_phage	2.4e-90	98.2
WP_000079508.1\|4394095_4394506_-	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_001663509.1\|4394562_4394796_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000453587.1\|4395184_4395730_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_059309222.1\|4395704_4397630_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
WP_000198153.1\|4397626_4397833_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
WP_059309223.1\|4397829_4399431_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.6e-308	98.9
WP_023278094.1\|4399411_4400731_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	6.2e-234	98.6
WP_001345004.1\|4400740_4401073_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	5.0e-55	99.1
WP_000063265.1\|4401128_4402154_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.7e-191	98.8
WP_001695575.1\|4402195_4402591_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	8.2e-57	93.9
WP_059309224.1\|4402602_4402956_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	3.4e-62	99.1
WP_059309225.1\|4402967_4403543_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.1e-52	61.2
WP_059309226.1\|4403539_4403935_+\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	5.5e-69	96.9
WP_032082990.1\|4403942_4404683_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.7e-127	95.9
WP_032082986.1\|4404698_4405121_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	5.3e-70	96.4
WP_000459464.1\|4405102_4405537_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.7e-63	98.3
WP_059309227.1\|4405529_4408091_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	88.2
WP_000847352.1\|4408087_4408417_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.1e-57	97.2
WP_001152632.1\|4408416_4409115_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	9.5e-133	99.1
4408423:4408437	attL	NA	NA	NA	NA
WP_059309228.1\|4409120_4409864_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.6e-149	98.0
WP_071887086.1\|4409800_4410433_+\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	1.1e-92	95.2
WP_059309230.1\|4410493_4413889_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	89.0
WP_052940550.1\|4413956_4414556_+	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	5.3e-108	97.0
WP_071887089.1\|4414620_4418151_+\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	8.5e-12	36.4
WP_059309232.1\|4418150_4418735_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	95.8
WP_001217539.1\|4418850_4419099_-	DinI-like family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_021557428.1\|4419160_4420258_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	1.1e-212	99.7
WP_000543828.1\|4420346_4421384_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_000891389.1\|4421517_4421760_+	envelope stress response protein PspG	NA	NA	NA	NA
WP_000235522.1\|4421925_4422909_-	quinone oxidoreductase	NA	NA	NA	NA
WP_000918363.1\|4422991_4424407_+	replicative DNA helicase	O80281	Escherichia_phage	4.8e-200	78.3
4430293:4430307	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4510851 : 4572139

Acinetobacter_phage(23.08%)

integrase,protease,tRNA,transposase

attL 4513018:4513032|attR 4573421:4573435

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295074.1\|4510851_4512369_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.7e-87	38.0
WP_000856841.1\|4512605_4514063_-	dipeptide/tripeptide permease DtpC	A0A0P0IY73	Acinetobacter_phage	8.9e-48	29.4
4513018:4513032	attL	NA	NA	NA	NA
WP_001295383.1\|4514121_4516269_-	lysine decarboxylase CadA	NA	NA	NA	NA
WP_000092909.1\|4516348_4517683_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_001187182.1\|4518048_4519587_-	lysine decarboxylation/transport transcriptional activator CadC	NA	NA	NA	NA
WP_085975623.1\|4521262_4521460_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_059309235.1\|4521647_4522058_-	toxin	NA	NA	NA	NA
WP_039023579.1\|4522148_4522517_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_059309237.1\|4523214_4523436_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	7.2e-10	44.4
WP_059309238.1\|4523498_4523975_-	RadC family protein	NA	NA	NA	NA
WP_057109541.1\|4523990_4524470_-	antirestriction protein	A9J566	Pseudomonas_phage	5.2e-13	31.0
WP_001175153.1\|4524735_4525554_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.4e-47	39.5
WP_001278287.1\|4525643_4525877_-	DUF905 family protein	NA	NA	NA	NA
WP_001097368.1\|4525882_4526560_-	hypothetical protein	NA	NA	NA	NA
WP_059309239.1\|4526678_4527563_-	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_021573508.1\|4527668_4528658_+	hypothetical protein	NA	NA	NA	NA
WP_021527174.1\|4528654_4529509_-	hypothetical protein	NA	NA	NA	NA
WP_000573211.1\|4531171_4531420_-	hypothetical protein	NA	NA	NA	NA
WP_001075462.1\|4531524_4532256_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_001100706.1\|4532765_4533218_+	N-acetyltransferase	NA	NA	NA	NA
WP_001126811.1\|4535869_4536436_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_059309240.1\|4536682_4537258_+	hypothetical protein	NA	NA	NA	NA
WP_000958149.1\|4537326_4537563_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_153275897.1\|4537591_4537744_+	hypothetical protein	NA	NA	NA	NA
WP_088895425.1\|4538245_4539473_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_059309241.1\|4539575_4540700_+	glycosyltransferase	NA	NA	NA	NA
WP_021527151.1\|4540841_4542116_-	esterase family protein	NA	NA	NA	NA
WP_001554632.1\|4542653_4543088_-	hypothetical protein	NA	NA	NA	NA
WP_001554634.1\|4543900_4544110_+	microcin H47 immunity protein MchI	NA	NA	NA	NA
WP_071780941.1\|4544137_4544365_+	microcin H47	NA	NA	NA	NA
WP_001554635.1\|4544636_4546187_+	hypothetical protein	NA	NA	NA	NA
WP_021527076.1\|4546212_4546665_+	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
WP_000489615.1\|4546817_4548092_+	HlyD family secretion protein	NA	NA	NA	NA
WP_112030617.1\|4548066_4550187_+	microcin export transporter peptidase/ATP-binding subunit MchF	F2Y165	Organic_Lake_phycodnavirus	1.2e-13	24.2
WP_001390454.1\|4550247_4550571_-	hypothetical protein	NA	NA	NA	NA
WP_021527187.1\|4551182_4551869_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_021527186.1\|4551968_4552415_-	hypothetical protein	NA	NA	NA	NA
WP_021527185.1\|4552872_4553421_+	hypothetical protein	NA	NA	NA	NA
WP_001255836.1\|4557116_4557449_+	DUF600 family protein	NA	NA	NA	NA
WP_059309242.1\|4557545_4560959_+	DEAD/DEAH box helicase family protein	Q6NDX2	Leptospira_phage	2.5e-16	26.2
WP_021527170.1\|4561022_4562657_+	N-6 DNA methylase	J7I0U9	Acinetobacter_phage	2.6e-32	30.9
WP_021527169.1\|4562665_4563760_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_085962211.1\|4564447_4565616_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
WP_170983259.1\|4566934_4567324_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	3.9e-67	98.4
WP_000587837.1\|4567583_4568126_-	AAA family ATPase	NA	NA	NA	NA
WP_059309245.1\|4568171_4568999_-	aminoglycoside 3-N-acetyltransferase	NA	NA	NA	NA
WP_001339175.1\|4569141_4570350_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	2.3e-235	99.8
WP_001218753.1\|4570876_4572139_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	1.1e-78	42.6
4573421:4573435	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007491

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection