CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008871	Pseudomonas aeruginosa strain W45909 chromosome, complete genome	3 crisprs	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	2	0	7	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008871_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008871_1

342356-342469

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008871_1

>merge|NZ_CP008871|1|342356-342469|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP008871|1|1|342356-342469|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008871.2\|WP_003084303.1\|340320_341475_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP008871.2\|WP_003084301.1\|339168_340266_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008871.2\|WP_003111119.1\|329204_330083_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP008871.2\|WP_003084290.1\|334736_336095_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP008871.2\|WP_003118763.1\|348259_349279_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP008871.2\|WP_023114765.1\|330245_330911_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP008871.2\|WP_003084299.1\|337646_338750_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008871.2\|WP_003112937.1\|332288_333665_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP008871.2\|WP_003118762.1\|347649_348261_-\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NZ_CP008871.2\|WP_003084297.1\|336160_337531_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP008871.2\|WP_003112945.1\|351639_352134_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP008871.2\|WP_023114764.1\|330971_332033_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008871.2\|WP_016263945.1\|343512_345900_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP008871.2\|WP_003112941.1\|346010_347063_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP008871.2\|WP_003112942.1\|347041_347545_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP008871.2\|WP_003112938.1\|333943_334696_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP008871.2\|WP_003084320.1\|349298_350051_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008871.2\|WP_003118764.1\|350099_350798_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP008871.2\|WP_003084339.1\|352138_352831_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP008871.2\|WP_003084327.1\|350819_351374_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008871.2\|WP_003084303.1\|340320_341475_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP008871.2\|WP_003084301.1\|339168_340266_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP008871.2\|WP_003111119.1\|329204_330083_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP008871.2\|WP_003084290.1\|334736_336095_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP008871.2\|WP_003118763.1\|348259_349279_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.48481e-56
NZ_CP008871.2\|WP_023114765.1\|330245_330911_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.47331e-08
NZ_CP008871.2\|WP_003084299.1\|337646_338750_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP008871.2\|WP_003112937.1\|332288_333665_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP008871.2\|WP_003084297.1\|336160_337531_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP008871.2\|WP_003112945.1\|351639_352134_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	2.14015e-67
NZ_CP008871.2\|WP_023114764.1\|330971_332033_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.45331e-164
NZ_CP008871.2\|WP_016263945.1\|343512_345900_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP008871.2\|WP_003112941.1\|346010_347063_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_CP008871.2\|WP_003118762.1\|347649_348261_-\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00342131
NZ_CP008871.2\|WP_003112938.1\|333943_334696_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.81471e-108
NZ_CP008871.2\|WP_003118764.1\|350099_350798_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.81845e-78
NZ_CP008871.2\|WP_003084339.1\|352138_352831_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79

>NZ_CP008871.2|WP_003084303.1|340320_341475_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP008871.2|WP_003084301.1|339168_340266_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP008871.2|WP_003084299.1|337646_338750_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP008871.2|WP_003084297.1|336160_337531_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP008871.2|WP_003084290.1|334736_336095_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP008871.2|WP_003112938.1|333943_334696_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NZ_CP008871.2|WP_003112937.1|332288_333665_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP008871.2|WP_023114764.1|330971_332033_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAIPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLARTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP008871.2|WP_023114765.1|330245_330911_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVEHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_CP008871.2|WP_003111119.1|329204_330083_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP008871.2|WP_016263945.1|343512_345900_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLAVAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPTPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDFPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAADADSPWWDDRRTERRETRADIVRAAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP008871.2|WP_003112941.1|346010_347063_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP008871.2|WP_003112942.1|347041_347545_-|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP008871.2|WP_003118762.1|347649_348261_-|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_CP008871.2|WP_003118763.1|348259_349279_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP008871.2|WP_003084320.1|349298_350051_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP008871.2|WP_003118764.1|350099_350798_+|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESEACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP008871.2|WP_003084327.1|350819_351374_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP008871.2|WP_003112945.1|351639_352134_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP008871.2|WP_003084339.1|352138_352831_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

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Crispr_ID: NZ_CP008871_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008871_2

3115036-3115249

Orphan

Consensus_repeat	Method
CGCCCTACGGGGTAATGGGGCGCTCGGGTAGGGCGAATAGCCGCTCGCGGCTA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP008871_2

>merge|NZ_CP008871|2|3115036-3115249|PILER-CR
GGGGCGCTCGGGTAGGACGAGGTACCGGTGCGCTGGCGGATAGCGCCGGGGCGCTATTCGCCCTACGGGGTAATGGGGCGCTCGGGTAGGGCGAATAGCCGCTCGCGGCTATCCGCCGGGTGGGGTACCGGTGCGTTGGCGGATAGCGCCGGGGCGCTATTCGCCCTACGGGGTAATGGGGCGCTCGGGTAGGGCGAATAGCCGCTCGCGGCTA

>NZ_CP008871|2|1|3115036-3115249|PILER-CR
GGGGCGCTCGGGTAGGACGAGGTACCGGTGCGCTGGCGGATAGCGCCGGGGCG	CTATTCGCCCTACGGGGTAATGGGGCGCTCGGGTAGGG
CGAATAGCCGCTCGCGGCTATCCGCCGGGTGGGGTACCGGTGCGTTGGCGGAT	AGCGCCGGGGCGCTATTCGCCCTACGGGGTAATGGGGCGCTCGGGTAGGG
CGAATAGCCGCTCGCGGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008871.2\|WP_003117847.1\|3111223_3112291_+\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|224871
NZ_CP008871.2\|WP_003089416.1\|3121592_3121736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008871.2\|WP_003115101.1\|3112287_3113124_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP008871.2\|WP_003117844.1\|3119803_3121429_-\|NADP-dependent-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|143401
NZ_CP008871.2\|WP_003105356.1\|3106978_3107890_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP008871.2\|WP_003089436.1\|3109603_3110509_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP008871.2\|WP_003107130.1\|3123210_3123732_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273551
NZ_CP008871.2\|WP_003107490.1\|3115591_3117001_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NZ_CP008871.2\|WP_003089433.1\|3110613_3111174_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP008871.2\|WP_003089438.1\|3102039_3102945_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380381
NZ_CP008871.2\|WP_003117848.1\|3107986_3109603_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293752
NZ_CP008871.2\|WP_003107732.1\|3113089_3114289_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270271
NZ_CP008871.2\|WP_059301359.1\|3118326_3119586_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173852
NZ_CP008871.2\|WP_023114396.1\|3103096_3104437_-\|aryl-sulfate-sulfotransferase	unknown	unknown	gnl\|CDD\|368677
NZ_CP008871.2\|WP_003089408.1\|3125572_3125938_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225981
NZ_CP008871.2\|WP_003107128.1\|3121761_3123114_-\|GntP-family-permease	unknown	unknown	gnl\|CDD\|308194
NZ_CP008871.2\|WP_003107131.1\|3123926_3124958_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380489
NZ_CP008871.2\|WP_003089406.1\|3125970_3127269_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP008871.2\|WP_023114395.1\|3104459_3106829_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|224544
NZ_CP008871.2\|WP_003107493.1\|3117060_3118296_-\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924

Protein	Function_ID	Function_description	E-value
NZ_CP008871.2\|WP_003117847.1\|3111223_3112291_+\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	1.08154e-22
NZ_CP008871.2\|WP_003115101.1\|3112287_3113124_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.57364e-103
NZ_CP008871.2\|WP_003117844.1\|3119803_3121429_-\|NADP-dependent-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|143401	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.	0
NZ_CP008871.2\|WP_003105356.1\|3106978_3107890_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.58829e-34
NZ_CP008871.2\|WP_003089436.1\|3109603_3110509_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	4.9427e-28
NZ_CP008871.2\|WP_003107130.1\|3123210_3123732_-\|AAA-family-ATPase	gnl\|CDD\|273551	TIGR01313, Thermosensitive_gluconokinase, carbohydrate kinase, thermoresistant glucokinase family. This model represents a subfamily of proteins that includes thermoresistant and thermosensitve isozymes of gluconate kinase (gluconokinase) in E. coli and other related proteins; members of this family are often named by similarity to the thermostable isozyme. These proteins show homology to shikimate kinases and adenylate kinases but not to gluconate kinases from the FGGY family of carbohydrate kinases.	1.18389e-88
NZ_CP008871.2\|WP_003107490.1\|3115591_3117001_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP008871.2\|WP_003089433.1\|3110613_3111174_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	4.02431e-26
NZ_CP008871.2\|WP_003089438.1\|3102039_3102945_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|380381	cd06976, cupin_MtlR-like_N, AraC/XylS family transcriptional regulators similar to MtlR, N-terminal cupin domain. MtlR is a Pseudomonas fluorescens protein that acts as a transcriptional regulator of the mannitol utilization genes. It has an N-terminal cupin domain (represented by this alignment) and a C-terminal AraC/XylS family helix-turn-helix (HTH) DNA-binding domain. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	2.70391e-37
NZ_CP008871.2\|WP_003117848.1\|3107986_3109603_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|293752	cd16028, PMH, Phosphonate monoester hydrolase/phosphodiesterase. Phosphonate monoester hydrolase/phosphodiesterase hydrolyses phosphonate monoesters or phosphate diesters using a posttranslationally formed formylglycine as the catalytic nucleophile. PMH is the member of the alkaline phosphatase superfamily. The structure of PMH is more homologous to arylsulfatase than alkaline phosphatase. Sulfatases also use formylglycine as catalytic nucleophile.	0
NZ_CP008871.2\|WP_003107732.1\|3113089_3114289_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270271	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily. This subfamily includes nitrate (NrtA) and bicarbonate (CmpA) receptors. These domains are found in eubacterial perisplamic-binding proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. These binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.20311e-84
NZ_CP008871.2\|WP_059301359.1\|3118326_3119586_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173852	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C. DszC is a flavin reductase dependent enzyme, which catalyzes the first two steps of DBT desulfurization in mesophilic bacteria. DszC converts DBT to DBT-sulfoxide, which is then converted to DBT-sulfone. Bacteria with this enzyme are candidates for the removal of organic sulfur compounds from fossil fuels, which pollute the environment. An equivalent enzyme tdsC, is found in thermophilic bacteria. This alignment also contains a closely related uncharacterized subgroup.	1.96409e-165
NZ_CP008871.2\|WP_023114396.1\|3103096_3104437_-\|aryl-sulfate-sulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	1.30976e-26
NZ_CP008871.2\|WP_003089408.1\|3125572_3125938_-\|cupin-domain-containing-protein	gnl\|CDD\|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	1.51695e-30
NZ_CP008871.2\|WP_003107128.1\|3121761_3123114_-\|GntP-family-permease	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	0
NZ_CP008871.2\|WP_003107131.1\|3123926_3124958_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	1.17788e-113
NZ_CP008871.2\|WP_003089406.1\|3125970_3127269_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.12635e-67
NZ_CP008871.2\|WP_023114395.1\|3104459_3106829_-\|TonB-dependent-receptor	gnl\|CDD\|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	2.22792e-60
NZ_CP008871.2\|WP_003107493.1\|3117060_3118296_-\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0

>NZ_CP008871.2|WP_003107732.1|3113089_3114289_+|ABC-transporter-substrate-binding-protein
MCLDDPTHSRRDILKLAALLSAAGALPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHANGLFEAEGIQAERPVLLRSWAQVIEAFISGQVNVIHLLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPEIADVRQLGGKSVAIPFWYSIHNVVLQQLLRDNGLRAVSRAVGAALAADEVNLVVLPPSDMPPALASKRIHGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLERRPQWSQKVVNAIVKAQLWTREHRAEAAQLLSKAGANRYTPHAPEVLGRVLAPGAEEQQAYLASGAIRHADWQERRIDFQPYPYPSYTEELVRRLKDTLIEGNNAFLASLDPRQVASDLVDDRFVRQALAEVGGLQAFGLAEGFQRSEEISP
>NZ_CP008871.2|WP_003115101.1|3112287_3113124_+|ABC-transporter-ATP-binding-protein
MSEALLDARGIALGYPRGAGWQAVLGDFELRLGAGEVVSILGPSGVGKSSLLRVLAGLQEPAAGSVRVLGEPLRGPHPGVAVAFQDPSLLPWLNLEKNVAFGLDFARQPHLDAATRQARVDQAIAAVGLEHARARYPAQLSGGMAQRTALARCLARQPKVLLLDEPFGALDEVTRADMQQLLLRAIHERGTAVVLITHDIDEALLLSERILLLGDSPARTLGEWRIDLPQPRAELVEELGALRIEILKTLRRASRTHAHPIAQPEASHVPGRPDPFPT
>NZ_CP008871.2|WP_003117847.1|3111223_3112291_+|acyl-CoA/acyl-ACP-dehydrogenase
MLDPTLSDWLDRQADALDRGDADPAALLPRLAAAGVLGVAVEERLGGAGGTLADAVERVAAVAARSLTAAFVFWGQRAFIEYLLQSPNQELRQRLLGDLLAGRLAGATGLSNAMKFLSGIEALQVVAHAEEAGWRLDGRLPWVTNLRSGDFVVAAAIEHGEGGKPFVLAIPEGLAGLQRSADLRLLGLQCSNTAALDLRAVAVGRDWLLHDDARQFLPRVRPAFLGLQCGMAIGLARRALDEVQRHLGGSRSLLDGELAAQRETLDGHVAALHAGLASGEFASQPARLFRIRIGLAEAAANAVQLELQASGGKAYLSEHGAGFARRWRESAFVPIVTPSLVQLRAELQRQAEAKA
>NZ_CP008871.2|WP_003089433.1|3110613_3111174_+|carboxymuconolactone-decarboxylase-family-protein
MSRVPVLTLENAPEAARPFLQTALNNSGYIPNLLGVLANAPAALETYLTVSGLNAKASLGLPEREVVQLVAATTHGCDFCVAGHTAVARNKARLPEPVIEALRARGELPDARYEALADFTRAVIASRGAVTDEQFEAFRAAGFDQAQALEVILGVSLATLCNFANVFARTPLNAELEQYRWTNPQA
>NZ_CP008871.2|WP_003089436.1|3109603_3110509_-|AraC-family-transcriptional-regulator
MNSSNPLVDWLLDSLEVDTSLFHVGRYCGGWHASTHGLARASFHLVVQGHCWAHVAGSARGWRLDSGDALFFLRDVEFRLSSEATAEAARCQPRGEMQALEWNAADGAGLVCGFFHFHSGLSGLIVDALPDWLILRAGDPALDAARRLFALIVDECRRQPAPSPVLLERLSHLLFLYVLRQQVLDNPTLGGLVALARQPQFAGLLEALIEAPEQPWSLEQMAERTGLSRSAFFKRFNELSGQSPGQVLLALRMHRACALLRADASVAEVAAAVGYQSTAAFTRAFHKATGQQPGAYRKASR
>NZ_CP008871.2|WP_003117848.1|3107986_3109603_+|alkaline-phosphatase-family-protein
MSQPKPIRNVLYIMCDQLRRDYLSCYGHPYLHTPNIDRLAAEGVRFARAYTQGTICGPSRMSSYTGRYVSSHQVAWNAVPLPLEELTLGDYLRAAGVRTALVGKTHATANLEGMRRFGIDPASARGAALAEAGFEPYDRNDGVYPDDPAFADKRESAPYTHYLRRLGFTGDNPWHDWANAAAGADGEILSGWRMRHAGLPTRLPEAHSETAYTTRRAMDFIDEQGERPWCLHLSYIKPHWPYIAPAPYHALYRADQVLPALRAAPGEESDHPVYRAFREHRESLNFSREDVRRQVIPTYMGLIRQVDDQLGRLFQHMRASGRWDDTLIVFTSDHGDFLGDHGLGEKEFLLESAVGVPLLIRDPRPEADATRGRVEEALVQSIDVLPSILEAFAVEPASHRIEGRSLLPFVHGAPPADWRRYAIAEYDYAFQAPARERLGRPIDACRMYMVRSERWKYIAYDGFRAQLFDLASDPGELRDLGADPAHAAVREAHAGMLFDWLRGLKRRTTISNAEIDLRGQAFRYGEPEGGRLVPIGLW
>NZ_CP008871.2|WP_003105356.1|3106978_3107890_+|LysR-family-transcriptional-regulator
MHIDLRQLRHFIALHEHRSFVAAALAVNLSQSAFSRSIQALEHSAGCRLVDRAAKDLRPTKQGLIVLEHARRLVSGAHNLANEIALFNGLEAGELRFGAGPAPATWLVPRAVGRFNVRYPKARVSFQVEHWQALNRRLQAEEFEFFVADTRHFEADPQYRTSRLRPRRWHFCCREGHPLAARESVSAEELLSFPLATNISPPNIRKVLVDLSGRPDFRPAIECENGHSLLGVVLASDAIGISSGLGDLAPPGQGGLRPLRVRELPDDLDELHTRYGIVSRAGYSLSPLAEAMIDELKRVDDAT
>NZ_CP008871.2|WP_023114395.1|3104459_3106829_-|TonB-dependent-receptor
MNRRPAYRSIPSSRSAPFRRRLLPLSICLACAGGAQLAGADDTPAGTEEARQAQPATTLQTVTVTSRRRVENSQDVPTAMSVLGGETLESQRIYRVQDLQQLVPSTNVAYVHARQSSVSIRGLGNNPASDGLEGSVGLYLDNVYLGRPGMASFDLLDIEQLEVLRGPQGTLFGKNTTAGVINIGTRAPSFTPERSAEISGGEDGYFQARGTISGPLGETLAGRLSAYRTRDDGYVKNLHDGNTLNGGARQGFRGQLLFKPNDDFSLRWIGDYNEEDSDNGVLTLFSSGPTVNGVNRYEQRAAAAGATLVDGHRRKVNFDSDQQVTVFQGGTSVEANWKLANDFTLTSISAYRWWDFTPRNDDGLDVPAAYNAGVSVRDKQWSQEIRLASPSGGFFDYVLGAYYFGQDLDNKSFTDYGPRADIWNGTPAGALSDVSTRGRGHIDTDSYALFAQGTWHLTERLDLTAGVRGTYEEKSAWVERYAPLGGAAVSGAAAAARNGRVGAYDSGDIGLHSVSPSALLSLSYRFSDQVLGYASLSHGEKSGGVNLTVASAPSAGADSLLIGTERANDAELGLKTTLLDNRLILNGNLFWTVVHGYQANAYDEANRTQYLTNAGDVRSRGLEFEATALPIRGLTLNFNASYNDVRYLSYKNAPCAPEVAFQAGAPASCDLSGHQVVGASKYIANFNSEYRWKLDDGLEPYLTASYAFRSRAVGTIDDSAYGQIPSYALVNASAGLRGDYGDGQWDLSLWLKNAFDKTYFTSLWNSANGGYAGVLGTPRTLGVTARYDF
>NZ_CP008871.2|WP_023114396.1|3103096_3104437_-|aryl-sulfate-sulfotransferase
MPRFPMLLLSAALLAAGAHAAPSVYPTGVTRYAPQKAFNQYVIFSGADRKTHLIDMNGNEVKRWDYPGFPAAVIDPALNGGKRGHVLLQLADLAAPDKLASPGNGLANQALGELDWDGKEVWRWGDQAPGGAAHQHHDQRRLANGNTLLLANKVHAVKGFAVPRVIDDVIYEVTPQGKLAWSWTASEHLDEFGFTADQLKRVRASENPDYLHINNLAPLGENRWHAAGDRRFAPDNLLLDSRNANFIAIVDKASGKVVWRLGPNLPPIDPKSARKLPRPVDQISGQHDAHLIPEGLPGAGNLLVFDNQGDAGYPSVQRGLVSGSRVLEIDPLKKQIVWQYTAEDSQQPGWAFYSAFISSARRLPNGNTLIDEGQNGRFFQVTPGGEIVWEYVSPYFGKAPRGDARSNWVYRALPVAYDWVPEGTPREEKAVNLAVPGATPQVTARR
>NZ_CP008871.2|WP_003089438.1|3102039_3102945_-|AraC-family-transcriptional-regulator
MPRASKVTDPSYELMDDHEGHSLIYRQHGFPSPLVRWHFHKEYELHLIVASSGKVFIGDYIGNFAPDTLFLTGPNLPHNWISQVEPDEVVARRDMLVNFTDEVLEDGSGVFSELNRLAPLLARARYGIEFRDPALIGESRRLLQRIADSGGMTRLGYFFILMEQLAECEDYQLLSTVTSSQLADEHNVERINRAVDYIFQHYAQDLTQEQVAAHLGMTPTYFSRFFKQAAGRGFVEFVNRLRISKSCELLARSELPVTEVCFESGFSNLSNFNRRFQQLKGMTPTGYRRLVTQRLTEQNLL
>NZ_CP008871.2|WP_003107490.1|3115591_3117001_+|LLM-class-flavin-dependent-oxidoreductase
MPREIRLNAFEMNCVGHQSPGLWAHPRDRSSQYKDLEYWTDLARLLERGRFDGLFIADVLGIYDVLDGNGDAAIRQAAQVPVNDPLALITPMAAVTRHLGFGLTASLSFEHPYPFARRLSTLDHLTKGRIGWNVVTSYLESGARNLGQQAQLDHDRRYDYADEYLQVLYKLFEGSWEDGAVLRDRRRRIFSDPGKIHEIRHVGEHFQVPGIHLCEPSPQRTPVLYQAGASSRGKRFAAEHAECVFVAAPSKTVLKQAVADIRQRVAEAGRDPRKVLVFNLQTVVLGETDAKARAKFDEYRAFVSYEGALALISGWTGIDFGQYRPDQVLRHIHTNAIQSAVEAFSSADPTRTWTVRELADWVGIGGFGPLFVGSPATVADLLQEWVEDTDVDGFNLAYALAHETFSDVVELLVPELQKRGVYKTEYAPGTLREKLFGDGPRLPDSHPAAGYRDLRALWEKEAGRNALPA
>NZ_CP008871.2|WP_003107493.1|3117060_3118296_-|SfnB-family-sulfur-acquisition-oxidoreductase
MSALEKNAADPYRQPLPRTPARRIADDAEAIRVARELAGLFAEEASLRDRQRRLPVAELEAFSQSGLWGISVPRAYGGAEVGYRTLAEVLKTIAAVDPSLAQLPQNHLAVLDHLRLDGSEEQKRFFYGLVLDGVRFGNAFSERHSRTVAEFQTRVLADGDGFRIDGRKFYSSGALLAHWVPAVGLDAEQRAHLAFIPRDAPGLTVIDDWSGFGQRTTASGTVILDNVRVPAEHVIPVHRAFDRPTAAGAVSQFIQAAIDAGIARGILAETVQQVRRHARPWIDANQQHAWEDPYTIQQVGDLRIRVRAAEAVLDLAADAIEAALAAPDEESVAAASIAVAEAKVLTTEAALLAANRLFELAGTRSTLEELNLDRHWRNARTHTLHDPVRWKYHAIGNYQLNGVKPPRHAWL
>NZ_CP008871.2|WP_059301359.1|3118326_3119586_-|acyl-CoA-dehydrogenase-family-protein
MNARVHPEATAASLSEGADYELLAQRFRPIFARIAEGAVERERQRELPHEAIAWLKQAGFGAVRVPREHGGAGASLPQLVQLLIELAEADSNITQALRGHFAFVEDRLNAEPGPGRDRWLRRFVEGDLVGCAWTEVGSVRLGEVLTRVSRKDDGRWVVNGSKYYSTGSLFSDWIDLYAQRDDTGADVIAAIRTDQPGVRQSDDWDGFGQRTTGSGTSLFEDAEVEEENLIDFASRFKYQTAFYQLVLLAVLAGTGRAALRDVAAEVRGRTRIYSHGNAPRVSQDPQVQQVVGRIAARVYAAEAATLRAAEAAQRAYLARFVGNPQTEKEANVAAEIESAKAQAIVAELVLQATSELFDASGASAVGRGKQLDRHWRNARTAASHNPLIYKQRIVGDWEINGSEPPYVWQIGSGPATASR
>NZ_CP008871.2|WP_003117844.1|3119803_3121429_-|NADP-dependent-glyceraldehyde-3-phosphate-dehydrogenase
MTAPLHLDSLFPSLDAIPEQYRPDAPIEQRDYLVDGQLRHWDGPLAPVRSPVFLAEADGERQVILGSTPLLDADAALAALDAAVRAYDHGQGLWPNLRVAERIQHVERFLARMREQREAVVKLLMWEIGKNLKDSEKEFDRTCDYIVDTIEALKELDRRSSRFELEQGTLGQIRRVPLGVALCMGPYNYPLNETFTTLIPALIMGNTVVFKPAKFGVLLIRPLLEAFRDSFPPGVINVIYGRGRETVSALMASGKVDVFAFIGTHSGASDLKKLHPRPHRLRAALGLDAKNPGIVLPQVDLDNAVNEAVTGALSFNGQRCTALKILFVHESVLRPFLDKFSARLASLKPGMPWEPGVALTPLPEPGKVDYLEGLLNDALAKGARVVNAGGGEHRQSFFYPALLSPVSPDMRLYHEEQFGPLVPVVPYRELDEVIDYVLRSDYGQQLSLFGNDPAQIGRLVDAFANQVGRINVNAQCQRGPDSYPFNGRKNSAEGTLSVHDALRVFSIRTLVATRDTEANKTLVSEIIRNRASNFLTTDYIF
>NZ_CP008871.2|WP_003089416.1|3121592_3121736_-|hypothetical-protein
MTEPMQRPDHEASRWPRDFDIRQRYAEQQELLEPPPARPREEPTADA
>NZ_CP008871.2|WP_003107128.1|3121761_3123114_-|GntP-family-permease
MFGMSHDAYLLLDALVTIIGLIVLITRFKVHPFIALIIAAGFLGLTSGMPVEKIVKSFQDGFGGVLGFVGVILALGTMLGKLMADSGGADQIARTLIRAFGKERVHWSMMLAAFLVGIPLFFEIGFILLIPLVFIVARRSGVSLIKIGIPLLAGLSAVHGLVPPHPGPLLAIGVFGADIGKTILYGLIVALPTAAIAGPLFGALVSRYIPGTPSAELVEQIAHEPETQDLPSFGVTLATVLLPVFLMLLKTFADVAFPDGHAFRAWMDMIGHPISALLLALLVALYTFGYARGFDSKKILRLLDQSLAPTAAIVMIIGAGGGFKQMLVASGVGDVIGHLAVNAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPVIDLIPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMSVSETFKTWTAMETILSVVGLVFILLLSLVL
>NZ_CP008871.2|WP_003107130.1|3123210_3123732_-|AAA-family-ATPase
MHPPLQALVIMGVAGCGKSSVSQALCQRSGAHGIEGDSFHPAANIRKMSAGIPLTDDDRAGWLDTLAEQLRQAVAAGKLPVLTCSALKRAYRDRLRRAVPGLGIVYLELTPAVAAERVAQRPGHFMPATLIDSQFAALEPPLDEPLTLRLDATLPVECLAQAAHAWWLEHAAA
>NZ_CP008871.2|WP_003107131.1|3123926_3124958_+|LacI-family-DNA-binding-transcriptional-regulator
MSITKNDKNTRTTGRPTLNEVARRAGVSPITASRALRGVASVAEELAQKVRDAARELGYVANPAARALASAQSHSVAVLVPSLANLLFIETLEAIHAVLRPQGLEVLIGNFHYSRNEEEDLIRNYLAYQPRGLLLTGFERTESARRMIEASGIPCVYMMDLDSGSGLNCVGFSQLRAGEAAAEHLLARGRRRLAYIGAQLDQRTLLRGEGFRRALQKAGCYDPGLEILTPRPSSVALGGELFVQLLASQPQVDGVFFCNDDLAQGALLEALRRGVKVPEQIAVLGFNDLPGSDCTVPRLSSIRTPREAIGRRAAEQLLALIAGKEVRDSALDMGFELMAREST
>NZ_CP008871.2|WP_003089408.1|3125572_3125938_-|cupin-domain-containing-protein
MAITVIRHGITLDELDAWGSVADLGSEILEGEVKAFGKMTAGAPTDPVSAAYFGTTAGKFRMTYPFSEQATVVSGEVRLTDESTGQSTLYKAGDSWFVSKGTPVLWEVADGGFVKHYYAVA
>NZ_CP008871.2|WP_003089406.1|3125970_3127269_-|FAD-binding-oxidoreductase
MINIETPTYYTATKKYELSFPSLETDLDADVVVIGGGFSGINTALELAEHGITDIVVLEARHLGFGGTGRNGGQIMAGIGHDLEKIRKDVGEDGLRAIFEISDLGADIIKGRIEKYAIDADFCHGYGYMGFNARQAKTLQAWEKEFRSLGSPHEIRYLHGAEVRQIIGSDAYGSALLHMGGGHVHSLNLLLGEAKALAGLGARIFEYSPALEVQYGERIRVRTAKGSVTANKLLWACDSFLNRLEPELHRTTINTYAFQMMTEPLPDELIQRISPIRGAYSDIRPVIDYYRVTNENRLLFGAATPFVERIPGDLKAWNRKLMLKIFPYLEHVRIDLAWGGPMACSANLFPQIGSLSGRPNAFFVQGYSGFGVTPSHIVCKVLAEGMSEGSARYDLLSSVRRIPIHGKDHFRPLLLSAGKTWHQLSGYWNGRR

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Crispr_ID: NZ_CP008871_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008871_3

6701141-6701298

Orphan

Consensus_repeat	Method
CCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCATTGAAAAACGCATGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008871_3

>merge|NZ_CP008871|3|6701141-6701298|CRISPRCasFinder
CCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCATTGAAAAACGCATGCGGTTTGGCGTCTTGGGTGAGGCCGAGCCGACATCCTGTCAGGGCCTCGTCGTTCAGCCCATCCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCATTGAAAAACGCATGCG

>NZ_CP008871|3|2|6701141-6701298|CRISPRCasFinder
CCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCATTGAAAAACGCATGCG	GTTTGGCGTCTTGGGTGAGGCCGAGCCGACATCCTGTCAGGGCCTCGTCGTTCAGCCCAT
CCCCGGCCCGGCCATCCTGGCCGGTCGTTCGCATTGAAAAACGCATGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008871.2\|WP_003146829.1\|6702016_6704221_-\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|274168
NZ_CP008871.2\|WP_003096992.1\|6705323_6705827_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP008871.2\|WP_003099732.1\|6705826_6706636_+\|zinc-ABC-transporter-ATP-binding-protein-ZnuC	unknown	unknown	gnl\|CDD\|181939
NZ_CP008871.2\|WP_003097004.1\|6709460_6710138_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP008871.2\|WP_003122325.1\|6707458_6708247_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274513
NZ_CP008871.2\|WP_003102836.1\|6690469_6691063_-\|MarC-family-protein	unknown	unknown	gnl\|CDD\|170674
NZ_CP008871.2\|WP_003161102.1\|6696017_6696665_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP008871.2\|WP_003096976.1\|6694086_6694722_-\|thiol:disulfide-interchange-protein-DsbA/DsbL	unknown	unknown	gnl\|CDD\|239317
NZ_CP008871.2\|WP_003096979.1\|6695540_6695834_-\|cytochrome-c5-family-protein	unknown	unknown	gnl\|CDD\|225784
NZ_CP008871.2\|WP_003096998.1\|6706628_6707417_+\|zinc-ABC-transporter-permease-subunit-ZnuB	unknown	unknown	gnl\|CDD\|181938
NZ_CP008871.2\|WP_003118455.1\|6696928_6699670_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP008871.2\|WP_003097007.1\|6710214_6710997_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270315
NZ_CP008871.2\|WP_003096975.1\|6693192_6694071_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|226098
NZ_CP008871.2\|WP_003097002.1\|6708453_6709461_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236863
NZ_CP008871.2\|WP_003102831.1\|6694889_6695495_-\|cytochrome-c4	unknown	unknown	gnl\|CDD\|225418
NZ_CP008871.2\|WP_003102827.1\|6700071_6701022_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|235369
NZ_CP008871.2\|WP_003096984.1\|6699747_6700038_+\|DUF2782-domain-containing-protein	unknown	unknown	gnl\|CDD\|378588
NZ_CP008871.2\|WP_003096987.1\|6701310_6702000_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223287
NZ_CP008871.2\|WP_003125958.1\|6691180_6693196_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP008871.2\|WP_003099734.1\|6704330_6705254_-\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226908

Protein	Function_ID	Function_description	E-value
NZ_CP008871.2\|WP_003146829.1\|6702016_6704221_-\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	gnl\|CDD\|274168	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (Class II RNRs) related to the characterized species from Pyrococcus, Thermoplasma, Corynebacterium, and Deinococcus. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. This model identifies genes in a wide range of deeply branching bacteria. All are structurally related to the class I (non-heme iron dependent) RNRs. In most species this gene is known as NrdJ, while in mycobacteria it is called NrdZ. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP008871.2\|WP_003096992.1\|6705323_6705827_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	1.3923e-42
NZ_CP008871.2\|WP_003099732.1\|6705826_6706636_+\|zinc-ABC-transporter-ATP-binding-protein-ZnuC	gnl\|CDD\|181939	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed.	8.54289e-114
NZ_CP008871.2\|WP_003097004.1\|6709460_6710138_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	1.33335e-106
NZ_CP008871.2\|WP_003122325.1\|6707458_6708247_+\|hypothetical-protein	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	0.000920553
NZ_CP008871.2\|WP_003102836.1\|6690469_6691063_-\|MarC-family-protein	gnl\|CDD\|170674	PRK10739, PRK10739, YhgN family NAAT transporter.	4.81982e-48
NZ_CP008871.2\|WP_003161102.1\|6696017_6696665_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	4.02419e-107
NZ_CP008871.2\|WP_003096976.1\|6694086_6694722_-\|thiol:disulfide-interchange-protein-DsbA/DsbL	gnl\|CDD\|239317	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.	1.63388e-70
NZ_CP008871.2\|WP_003096979.1\|6695540_6695834_-\|cytochrome-c5-family-protein	gnl\|CDD\|225784	COG3245, CycB, Cytochrome c5 [Energy production and conversion].	1.51706e-36
NZ_CP008871.2\|WP_003096998.1\|6706628_6707417_+\|zinc-ABC-transporter-permease-subunit-ZnuB	gnl\|CDD\|181938	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB.	7.07263e-93
NZ_CP008871.2\|WP_003118455.1\|6696928_6699670_-\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP008871.2\|WP_003097007.1\|6710214_6710997_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270315	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold. This group includes the lipoprotein Tp32, a periplasmic component of a methionine uptake transporter system, and its closely related homologs. The Tp32 has both structural and sequential homology to the MetQ family of substrate-binding protein, and thus it belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	6.38438e-133
NZ_CP008871.2\|WP_003096975.1\|6693192_6694071_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	1.23885e-61
NZ_CP008871.2\|WP_003097002.1\|6708453_6709461_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	0
NZ_CP008871.2\|WP_003102831.1\|6694889_6695495_-\|cytochrome-c4	gnl\|CDD\|225418	COG2863, COG2863, Cytochrome c553 [Energy production and conversion].	1.5355e-43
NZ_CP008871.2\|WP_003102827.1\|6700071_6701022_+\|homoserine-kinase	gnl\|CDD\|235369	PRK05231, PRK05231, homoserine kinase; Provisional.	7.54032e-167
NZ_CP008871.2\|WP_003096984.1\|6699747_6700038_+\|DUF2782-domain-containing-protein	gnl\|CDD\|378588	pfam11191, DUF2782, Protein of unknown function (DUF2782). This is a bacterial family of proteins whose function is unknown.	3.76643e-30
NZ_CP008871.2\|WP_003096987.1\|6701310_6702000_-\|hypothetical-protein	gnl\|CDD\|223287	COG0209, NrdA, Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism].	5.19108e-14
NZ_CP008871.2\|WP_003125958.1\|6691180_6693196_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.41074e-62
NZ_CP008871.2\|WP_003099734.1\|6704330_6705254_-\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226908	COG4531, ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism].	2.34354e-156

>NZ_CP008871.2|WP_003102827.1|6700071_6701022_+|homoserine-kinase
MSVFTPLERSTLEAFLAPYDLGRLRDFRGIAEGSENSNFFVSLEHGEFVLTLVERGPVQDLPFFIELLDVLHEDGLPVPYALRTRDGEALRRLEGKPALLQPRLAGRHERQPNAHHCQEVGDLLGHLHAATRGRILERPSDRGLPWMLEQGANLAPRLPEQARALLAPALAEIAALDAERPALPRANLHADLFRDNVLFDGPHLAGLIDFYNACSGWMLYDLAITLNDWCSNTDGSLDPARARALLAAYANRRPFTALEAEHWPSMLRVACVRFWLSRLIAAEAFAGQDVLIHDPAEFEMRLAQRQNVEIHLPFAL
>NZ_CP008871.2|WP_003096984.1|6699747_6700038_+|DUF2782-domain-containing-protein
MRTLNRLMLAGLLAFAPLVAMAADDDAPSGEPDVTIRQEGDKTIQEYRVNGFLYAIKVVPKHGKPYFLVRADGSDGNFIRSDQPDKLIPQWEIFSW
>NZ_CP008871.2|WP_003118455.1|6696928_6699670_-|DNA-polymerase-I
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDAKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREELVEQVCEGIRPLMSGAATLDVPLVVEAGVGSNWDEAH
>NZ_CP008871.2|WP_003161102.1|6696017_6696665_+|YihA-family-ribosome-biogenesis-GTP-binding-protein
MSEKNPIVGLCQKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTHANLARTSKTPGRTQLLNFFALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSAPKRQGIDEAQMVLAQWLGLLDEEQEAFEEA
>NZ_CP008871.2|WP_003096979.1|6695540_6695834_-|cytochrome-c5-family-protein
MKKLLLAATVVAVAVTAQAAQDPEAVFNRTCGACHDGQLPMAPKKGDHAAWEPRLAKGMPTLVQHVTNGFNAMPPRGLCTDCSAEDYQATIQWMVKK
>NZ_CP008871.2|WP_003102831.1|6694889_6695495_-|cytochrome-c4
MNKLLVSLLLTLGLTGLAHAAGDAAAGQAKAAVCGACHGADGNSPAPNFPKLAGQGERYLLKQMHDIKDGKRTVLEMTGLLTNLSDQDLADIAAYFASQKMSVGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQLTDFREGTRTNDGDTKIMQSIAAKLSNKDIAAISSYIQGLH
>NZ_CP008871.2|WP_003096976.1|6694086_6694722_-|thiol:disulfide-interchange-protein-DsbA/DsbL
MRNLILTAMLAMASLFGMAAQADDYTAGKEYVELSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERAAAKK
>NZ_CP008871.2|WP_003096975.1|6693192_6694071_-|endonuclease/exonuclease/phosphatase-family-protein
MLRRWQREPRVAGSCDPRVNPSCDDSRELPDDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLADYDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPLPGPPGRGAIFVRFGEGADALVVVMMHLALGARTRTRQLAYIRELIGDYRHQVLMGDMNTHAVDLLENSPLRDLGLMAPQVEATFPSWRPQRNLDHILLSSDLALERVDVLDQPISDHLPVSVEIRLPDNLRDKALVVRGDAGSPP
>NZ_CP008871.2|WP_003125958.1|6691180_6693196_-|diguanylate-cyclase
MSRDDVQRWKDKYLENIEQQERLQRRWDARIDLLRRGLVRSSLAAEGSDKAVDQCMKELREILRRDDMDAGLSGLIPRLEKAVLDSEQRRQQRTQQNIDALGELAQQLLALDLPRELRKPLKQFARDIEERARQSREIPILLSELSRLQRQALAERKGGDAEDGRPSLLQRLFGGKESETTAEPSASVPSVVAASNTPIQPAAAAPSLPVAEHDEAPGGPPQPLPACTVAAIESAPAGWVGVAERGEPNQILLDEPREIWLDSLPLPAGLSFSETLEEAGAEPSPAMPADVESAPEAPATPVDNLDGQAVDEAYELPPPIPEPGYSAVAPHIEASLLRLLDGLSLPSSHQPQAEALRERIDGSLNWYELVPVLDDLAVLVLSLADSGQRDFEEYLRQLNERLESFLGHLGDAHAGYTDVLDNARGFDQSLREQVSGLQASVQQATDLNSLKLAVDSRLNGLLASMDEHQREQAEHEQEVSGRLQALMERVNSMEQDAKAFHSHLEDQRQKALTDPLTGLPNRAALSERLEQEVARRHRDGGDLLLAVLDIDHFKRINDDFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATSLEAGRQLLERLRAAIAACPFHFKGEPLSITCSAGITAFEGNEAGEAVFERADQALYRAKRAGRDRLEVA
>NZ_CP008871.2|WP_003102836.1|6690469_6691063_-|MarC-family-protein
MDMFGVAVLIFLVTDPFGNIAVFLAALKGVAPGRRLRVAFRELAFALGLLLLFLTLGEHILSGLGLSREATGIAGGIILFVIAMRLIFPSPQGLLGEVPDGEPLLVPLATPAVAGPSALAMLITLRTTFDGPLWELYLAVVLAWAATALILLQAAFLQRFLGPRGLTAIERLAGMLLIMLSVDMLLDNLRSVLHIAA
>NZ_CP008871.2|WP_003096987.1|6701310_6702000_-|hypothetical-protein
MSAVKITQKIKGFKVVNEAEEQALAAAAEAASVVQMDETLERPDTLIGATYKIKSPLFEHALYVTINDMVLNAGTAHEQRRPFEIFINSKNMDHFQWIVALTRIMSAVFRKGGDCTFLVEELKAVFDPRGGYLKKGGIYMPSIVAEIGGVLERHLTAIGLLRGPELDEEQRLFLAEKRAAYEAAQGTSKVEPGEGFPAGAQLCGKCNSMAVVQMDGCATCLNCGHSKCG
>NZ_CP008871.2|WP_003146829.1|6702016_6704221_-|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase
MLRTVAGFGRPNNHREVNQRMAKTDARSPRTERGTIALQDASQDIWDKKYRLKSKDGTPVDASVDGTWQRVARALADVEEKASREHWYGRFLWALRNGAIPAGRIISNAGALGHKPATSTINCTVSGTIQDSMDNILEKVHEAGLTLKAGCGIGYEFSTLRPRGAYVSGAGAYTSGPLSFMDIYDKMCFTVSSAGGRRGAQMGTFDVSHPDVREFIRAKREDGRLRQFNLSLLITDQFMQAVEQDADWPLVFPVHVKERDEIDLDDPNAVVWREWPIQDDYVQRADGLVACKVYGQVRARHLWDMIMVSTYDYAEPGFILIDRVNELNNNWWCEAIRATNPCGEQPLPPYGSCLLGSVNLTCFVEQPFGDEARFDWDRFREVVRVFTRMLDNVVEINGLPLEQQRQEILGKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEVAREMALVGWEVALELAREKGPAPILAQDYEVTAEMLRKRPEMAADGYKAGDRIRGSVLHAKYSRYMQRVAEHAPELIEALAETGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNLIREGRKTKEKVEVYSYELLAYRTLVNAQALPDSDDPARRLPDYFITADSVTPAQHVDIQAAAQKWVDSSISKTANVPTDYPFEDFKDIYRYAWHQGLKGCTTFRFNPEAFQGVLVKESDLEKTRYRFELEDGSVVEFKGNEQVEYDGEIHTAANLFDALKEGYYGKY
>NZ_CP008871.2|WP_003099734.1|6704330_6705254_-|zinc-ABC-transporter-substrate-binding-protein
MTLRPFALLSACFALFLLASPARAEVSVLTSIKPLQLVAAAIQDGVGQPDVLLPPGASPHQYALRPSDVRRLREVQLFYWIGPDLENFLPKVLAGRQGASVAVQDLPGMHLRKFVNFEEEEHAGHDEHDHDHRPGMLDAHLWLLPANARTIAARMAEDLAQVDPANAGRYRANLKAFEERLGGLDGKLRERLGKLAGKPFFVFHEAFDYFEEAYGLRHTGVFAVSAEVQPGARHVAAMRAQLKAAGPACIFSEPPLRPRLADTLSEGLPVRLAELDDLGVNVSVDANGYENLLNNLAGEFAGCLEKL
>NZ_CP008871.2|WP_003096992.1|6705323_6705827_+|transcriptional-repressor
MYKIAPKTPLACQPHDHSQCVSTALAEADALCARQGVRLTELRRRVLELVWQSHKPLGAYDILAVLSETDGRRAAPPTVYRALDFLQENGLVHRIASLNAFVGCNNPEHSHQGQFLICRTCHTAIELEQPDISRAIVAGANSVGFAVESQTVEVVGLCGTCRDQKDA
>NZ_CP008871.2|WP_003099732.1|6705826_6706636_+|zinc-ABC-transporter-ATP-binding-protein-ZnuC
MDNALVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTIGYMPQKLHVDATLPLSVLRFLRLVPGVRREQALAALREVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELFGQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPPGTRFTPVHKHGPDCNHG
>NZ_CP008871.2|WP_003096998.1|6706628_6707417_+|zinc-ABC-transporter-permease-subunit-ZnuB
MADFLLNALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDVSPTLAVTVGCVLLAVLLVTLQQRQPLAADTLLGILAHSTLSLGLVTLSFMKEVRVDLMAYLFGDLLAVSASDLLWIIAGSALVLALICFLWRPLLAITVHEELAKVEGLPVGAIRLALMLLIAIVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAVGASLLGLVAVCAGLALSWFKDTPAGPSIVVSAAGLFLLSFVLPRRTV
>NZ_CP008871.2|WP_003122325.1|6707458_6708247_+|hypothetical-protein
MSSFFRLLSVLAAALLVSACQGNASSQPTPVVAPQAQPADPYAELQQTLAAGKLEQAEQQWLALRSAAAGDERVEAFRRQLAEAYMQRGETALRQGDLNTATSALGHARGLMPKAPALTAGLDGAINRAKVDPARAEQARRMQQAAQQQMQQIIQTPPGGELKPLPGAPHLIDPQAASSAVPLPMLDGTGQGGLGAVLDAVAADVVAYRCRVHIEVRRDSDYPLVSDQLLARVKKLSPDFDLHLSHVVQADKPTRLILTPRN
>NZ_CP008871.2|WP_003097002.1|6708453_6709461_+|methionine-ABC-transporter-ATP-binding-protein
MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLINRLEEPSGGRILVEGEDVTALDAEGLRRFRQRVGMIFQHFNLLSSKTVADNIAMPLRLAGGFSRAEVDARVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRPSILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGGAIVEQGDVADVFLHPQHPTTRRFVFEAERVDEDERHDDFAHVPGLILRLTFRGEATYAPLLGTVARQTGVDYSILSGRIDRIKDTPYGQLTLALVGGDLEAAMSQLNAADVHVEVLR
>NZ_CP008871.2|WP_003097004.1|6709460_6710138_+|ABC-transporter-permease
MDFFETMSFANIDWYEIWLASVDTFWMLGGSLLFTVVLGLPLGVLLFLTGPRQMFEQKAVYTLLSLVVNILRSLPFIILLIVMIPLTVLITGTSLGVAGAIPPLVVGATPFFARLVETALREVDKGIIEATQAMGASTRQIIWNALLPEARPGIIAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVVMLLILVQILQTVGDKLVVHFSRK
>NZ_CP008871.2|WP_003097007.1|6710214_6710997_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLLAAFSAVAALGLTAAQAAESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGVHIEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPRVLTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDAMQKLAKALHSAEVKQFIQEKYKGAVVPAF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP008871_2	2.1\|3115089\|38\|NZ_CP008871\|PILER-CR	3115089-3115126	38	NZ_CP008871.2	3115365-3115402	1	0.974
NZ_CP008871_2	2.2\|3115180\|50\|NZ_CP008871\|PILER-CR	3115180-3115229	50	NZ_CP008871.2	3115250-3115299	1	0.98
NZ_CP008871_2	2.1\|3115089\|38\|NZ_CP008871\|PILER-CR	3115089-3115126	38	NZ_CP008871.2	3115262-3115299	2	0.947

1. spacer 2.1|3115089|38|NZ_CP008871|PILER-CR matches to position: 3115365-3115402, mismatch: 1, identity: 0.974

ggtaccggtgcgctggcggatagcgccggggcgctatt	CRISPR spacer
ggtgccggtgcgctggcggatagcgccggggcgctatt	Protospacer
***.**********************************

2. spacer 2.2|3115180|50|NZ_CP008871|PILER-CR matches to position: 3115250-3115299, mismatch: 1, identity: 0.98

tccgccgggtggggtaccggtgcgttggcggatagcgccggggcgctatt	CRISPR spacer
tccgccgggtggggtaccggtgcgttggcggatagcgctggggcgctatt	Protospacer
**************************************.***********

3. spacer 2.1|3115089|38|NZ_CP008871|PILER-CR matches to position: 3115262-3115299, mismatch: 2, identity: 0.947

ggtaccggtgcgctggcggatagcgccggggcgctatt	CRISPR spacer
ggtaccggtgcgttggcggatagcgctggggcgctatt	Protospacer
************.*************.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

638617 : 696140

Pseudomonas_phage(55.56%)

tail,holin,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009875776.1\|638617_639643_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.3e-109	58.1
WP_003085061.1\|639721_640291_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|640374_640728_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003142783.1\|640718_641261_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_022580735.1\|641233_642466_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	1.6e-77	43.1
WP_003085071.1\|642509_643016_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003099581.1\|643110_644664_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|644660_645932_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|646032_647955_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|648233_648566_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003113213.1\|648609_649461_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
WP_003085085.1\|649460_649841_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_023114717.1\|649877_650684_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_023114716.1\|650799_651786_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003129198.1\|651782_653075_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_004352244.1\|653055_655839_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_003109031.1\|655971_657684_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.0e-282	82.1
WP_003099554.1\|658956_659973_+	phosphotransferase	NA	NA	NA	NA
WP_003099549.1\|659969_660644_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_004352246.1\|660645_661404_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_004352248.1\|661404_662466_-	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_003459408.1\|662617_665011_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|665056_665689_+	response regulator transcription factor	NA	NA	NA	NA
WP_023114715.1\|665817_666852_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003085109.1\|667085_668195_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003099539.1\|668250_669297_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003113206.1\|669411_670659_+	ABC transporter permease	NA	NA	NA	NA
WP_003099535.1\|670764_671595_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|671718_672393_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003113205.1\|672392_673211_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_003113204.1\|673283_674762_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003113203.1\|675080_675395_-	transcription regulatory protein PrtN	NA	NA	NA	NA
WP_003113202.1\|675494_676265_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.4e-71	59.1
WP_003085132.1\|676722_676923_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003113201.1\|676970_677330_+	hypothetical protein	NA	NA	NA	NA
WP_003117965.1\|677786_678134_+\|holin	holin	B5TK61	Pseudomonas_phage	3.9e-26	51.8
WP_003118917.1\|678149_678779_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	7.1e-87	78.0
WP_003142810.1\|678775_679138_+	hypothetical protein	NA	NA	NA	NA
WP_003118919.1\|679134_679392_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003113190.1\|679707_680202_+	hypothetical protein	A0A286S1Q8	Klebsiella_phage	1.4e-45	56.5
WP_004352265.1\|680213_680561_+\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_003113188.1\|680590_680845_+	hypothetical protein	A0A2H4PI34	Pseudomonas_phage	6.3e-10	38.4
WP_023114714.1\|680891_682730_+\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	2.6e-28	35.8
WP_003113186.1\|682722_683064_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-17	40.0
WP_003118922.1\|683071_683767_+\|tail	phage minor tail protein L	A0A1B0VNE0	Pseudomonas_phage	1.5e-69	50.2
WP_003129219.1\|683769_684540_+	C40 family peptidase	A0A2D1GNP8	Pseudomonas_phage	5.5e-81	55.6
WP_016252934.1\|684594_685197_+\|tail	tail assembly protein	A0A1V0E8A0	Vibrio_phage	4.9e-53	57.3
WP_004352268.1\|685255_688870_+\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	55.3
WP_004352269.1\|689105_689894_+	hypothetical protein	NA	NA	NA	NA
WP_003115342.1\|689917_691009_+	hypothetical protein	A0A0S2SY45	Pseudomonas_phage	1.3e-46	36.9
WP_003113180.1\|691008_691344_+	hypothetical protein	NA	NA	NA	NA
WP_004352270.1\|691324_691555_+	hypothetical protein	A0A1W6JT87	Pseudomonas_phage	1.1e-18	64.0
WP_004352271.1\|691650_692703_+	hypothetical protein	A0A0H5AXZ9	Pseudomonas_phage	2.7e-62	52.5
WP_023114713.1\|692702_693005_+	hypothetical protein	A0A0H5B141	Pseudomonas_phage	6.3e-33	70.0
WP_003118930.1\|693001_693232_+	hypothetical protein	C8ZKF3	Pseudomonas_phage	1.4e-24	71.6
WP_003117978.1\|693650_694256_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|694257_695307_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085205.1\|695303_696140_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9

DBSCAN-SWA_2

1473420 : 1536350

Pseudomonas_phage(76.19%)

terminase,holin,protease,lysis,tRNA,portal,integrase

attL 1492843:1492865|attR 1533349:1533371

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003122145.1\|1473420_1474749_+\|tRNA	tRNA lysidine(34) synthetase TilS	M1IB95	Acanthocystis_turfacea_Chlorella_virus	1.0e-05	24.1
WP_003092366.1\|1474919_1476548_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.0e-158	53.1
WP_003092365.1\|1476550_1477396_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.4e-48	40.3
WP_003092364.1\|1477441_1478731_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.5e-139	61.5
WP_003098569.1\|1478795_1479080_+	cell division protein FtsB	NA	NA	NA	NA
WP_003092359.1\|1479099_1479804_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_003092358.1\|1479864_1480113_-	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_003453634.1\|1480078_1481305_-	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_003098564.1\|1481380_1482289_-	glutathione-dependent formaldehyde neutralization regulator	NA	NA	NA	NA
WP_003092351.1\|1482420_1483533_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.3e-35	29.1
WP_003113869.1\|1483586_1484438_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_003098560.1\|1484508_1484982_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_023114621.1\|1484978_1486046_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_003092341.1\|1486033_1486783_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.8e-68	53.0
WP_003098558.1\|1486815_1487451_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_003115226.1\|1487496_1488390_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1488494_1489499_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1489925_1490249_-	ferredoxin family protein	NA	NA	NA	NA
WP_079279453.1\|1490315_1492895_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
1492843:1492865	attL	NA	NA	NA	NA
WP_023114620.1\|1492954_1493929_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8E5	uncultured_Caudovirales_phage	1.9e-102	57.3
WP_071538228.1\|1493938_1494148_-	DUF4224 domain-containing protein	A0A1B0VMB6	Pseudomonas_phage	2.9e-13	57.8
WP_023114619.1\|1494361_1494652_-	hypothetical protein	A0A0A1IWS9	Pseudomonas_phage	1.0e-48	99.0
WP_023114239.1\|1494723_1494927_-	hypothetical protein	A0A125RNQ4	Pseudomonas_phage	1.0e-31	97.0
WP_023114241.1\|1495374_1495614_-	hypothetical protein	NA	NA	NA	NA
WP_012613684.1\|1496871_1497120_-	hypothetical protein	H2BD39	Pseudomonas_phage	1.2e-37	92.7
WP_023114616.1\|1497202_1497883_-	hypothetical protein	H2BDG4	Pseudomonas_virus	1.4e-80	66.7
WP_023114615.1\|1497912_1498449_-	DUF4406 domain-containing protein	A0A1B0YZW9	Pseudomonas_phage	5.0e-97	96.6
WP_023114614.1\|1498906_1499209_-	hypothetical protein	A0A0U4ISH7	Pseudomonas_phage	3.5e-39	94.0
WP_023114613.1\|1499208_1499523_-	hypothetical protein	A0A0U4KL54	Pseudomonas_phage	9.5e-40	83.7
WP_023114612.1\|1499957_1500206_-	hypothetical protein	A0A0U3TGX2	Pseudomonas_phage	8.3e-31	84.1
WP_023114611.1\|1500216_1500600_-	helix-turn-helix transcriptional regulator	A0A0U4IIG4	Pseudomonas_phage	1.1e-61	95.3
WP_124082060.1\|1500940_1501882_-	hypothetical protein	A0A1B0YZX8	Pseudomonas_phage	6.5e-60	46.9
WP_023114609.1\|1501847_1502546_-	hypothetical protein	A0A088FRV0	Escherichia_phage	1.0e-54	48.4
WP_023114608.1\|1502794_1503088_-	hypothetical protein	NA	NA	NA	NA
WP_023114607.1\|1503105_1503396_-	hypothetical protein	A0A125RNS4	Pseudomonas_phage	7.9e-41	92.0
WP_023114606.1\|1503938_1505033_-	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	3.2e-66	42.7
WP_023114605.1\|1505128_1505848_-	helix-turn-helix transcriptional regulator	A0A1W6JTC8	Pseudomonas_phage	4.9e-39	55.7
WP_031637426.1\|1505943_1506156_+	hypothetical protein	NA	NA	NA	NA
WP_023114604.1\|1506309_1507014_+	phage regulatory protein/antirepressor Ant	A0A1B0YZY9	Pseudomonas_phage	1.6e-124	97.9
WP_031637423.1\|1507078_1507834_+	helix-turn-helix domain-containing protein	A0A1B0YZZ0	Pseudomonas_phage	8.0e-77	80.2
WP_023114602.1\|1507830_1508514_+	hypothetical protein	A0A1B0YZY6	Pseudomonas_phage	3.0e-123	97.8
WP_023114601.1\|1508510_1508717_+	hypothetical protein	A0A1B0YZY8	Pseudomonas_phage	6.9e-31	92.6
WP_021205616.1\|1508713_1509295_+	recombination protein NinG	A0A0U4KL68	Pseudomonas_phage	6.6e-103	95.3
WP_023114600.1\|1509291_1509588_+	hypothetical protein	A0A1B0YZZ2	Pseudomonas_phage	1.2e-41	83.7
WP_014602588.1\|1509589_1509964_+	hypothetical protein	NA	NA	NA	NA
WP_003129668.1\|1510233_1510566_+\|holin	phage holin, lambda family	A0A1B0YZZ1	Pseudomonas_phage	5.1e-44	100.0
WP_023114599.1\|1510562_1511180_+	glycoside hydrolase family 19 protein	A0A1W6JTC9	Pseudomonas_phage	1.9e-108	94.1
WP_023875728.1\|1511176_1511419_+	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	3.2e-19	51.9
WP_031637422.1\|1511415_1511886_+\|lysis	lysis protein	A0A1B0Z001	Pseudomonas_phage	3.1e-71	91.0
WP_023114596.1\|1511882_1512626_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	1.1e-134	99.2
WP_023114595.1\|1512745_1513291_+\|terminase	terminase small subunit	A0A1W6JT69	Pseudomonas_phage	3.1e-94	100.0
WP_003159069.1\|1515231_1515447_+	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	6.5e-32	100.0
WP_019486499.1\|1515446_1517093_+\|portal	phage portal protein	A0A1W6JTB6	Pseudomonas_phage	0.0e+00	99.8
WP_113774872.1\|1517052_1519146_+\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	0.0e+00	97.8
WP_023110592.1\|1519212_1519530_+	DUF2190 family protein	A0A1B0YZT7	Pseudomonas_phage	1.6e-50	100.0
WP_023114592.1\|1519526_1519856_+	hypothetical protein	A0A1W6JT71	Pseudomonas_phage	1.5e-56	97.2
WP_023114591.1\|1519852_1520323_+	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	9.1e-87	98.7
WP_023114590.1\|1520326_1520521_+	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	5.7e-27	96.9
WP_015980909.1\|1520522_1521275_+	hypothetical protein	A0A1B0YZT8	Pseudomonas_phage	2.4e-137	99.6
WP_023114589.1\|1521356_1521998_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1W6JT76	Pseudomonas_phage	6.8e-109	93.9
WP_019396608.1\|1522059_1522362_+	hypothetical protein	A0A1W6JT80	Pseudomonas_phage	4.1e-48	100.0
WP_023114588.1\|1522464_1524948_+	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	98.5
WP_023114587.1\|1524987_1525509_+	hypothetical protein	A0A1W6JT98	Pseudomonas_phage	4.4e-98	99.4
WP_023114586.1\|1525508_1527218_+	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	8.5e-300	88.9
WP_023114585.1\|1527220_1527631_+	hypothetical protein	A0A1W6JT78	Pseudomonas_phage	1.2e-53	93.2
WP_021205046.1\|1527630_1528176_+	hypothetical protein	A0A1B0YZV4	Pseudomonas_phage	1.2e-90	92.3
WP_021205047.1\|1528186_1528591_+	hypothetical protein	A0A0U4B0P9	Pseudomonas_phage	1.2e-66	99.3
WP_023114584.1\|1528587_1530246_+	hypothetical protein	A0A0U4IJ51	Pseudomonas_phage	0.0e+00	98.5
WP_023114583.1\|1530275_1530863_+	hypothetical protein	A0A0U4B0K9	Pseudomonas_phage	3.3e-102	94.9
WP_003159082.1\|1530855_1531047_+	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	3.5e-29	98.4
WP_023114582.1\|1531051_1531612_+	hypothetical protein	A0A1B0YZW5	Pseudomonas_phage	5.5e-99	98.4
WP_023086976.1\|1531611_1531893_+	hypothetical protein	A0A1W6JTD4	Pseudomonas_phage	3.6e-46	100.0
WP_023114581.1\|1532472_1532787_+	hypothetical protein	A0A0U4K5I1	Pseudomonas_phage	5.0e-49	88.5
WP_014602611.1\|1532874_1533147_+	hypothetical protein	A0A0U4JEI3	Pseudomonas_phage	2.6e-46	98.9
WP_003092265.1\|1533514_1534522_-	TolB family protein	NA	NA	NA	NA
1533349:1533371	attR	NA	NA	NA	NA
WP_003092262.1\|1534669_1535176_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092260.1\|1535309_1536350_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5

DBSCAN-SWA_3

2602257 : 2609150

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003160440.1\|2602257_2603538_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.8e-98	45.4
WP_003113366.1\|2603539_2604937_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_023114465.1\|2604941_2605916_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003108776.1\|2606003_2606987_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_003090393.1\|2606983_2607319_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
WP_003090391.1\|2607315_2607621_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090389.1\|2607620_2607980_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_003090387.1\|2607976_2608372_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090386.1\|2608481_2609150_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1

DBSCAN-SWA_4

3031801 : 3071162

Planktothrix_phage(33.33%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016253414.1\|3031801_3033085_-\|tail	pyoverdine-tailoring periplasmic protein PvdN	NA	NA	NA	NA
WP_016253415.1\|3033107_3034454_-\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_003139293.1\|3034669_3036304_+	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA
WP_003120134.1\|3036352_3037777_-	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA
WP_003131508.1\|3037782_3039774_-	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	G9BWD6	Planktothrix_phage	6.9e-35	39.3
WP_003089547.1\|3039773_3040949_-	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA
WP_012614142.1\|3041049_3042045_-	FecR family protein	NA	NA	NA	NA
WP_003103620.1\|3042208_3042688_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003114509.1\|3042820_3044152_+	L-ornithine N(5)-monooxygenase	NA	NA	NA	NA
WP_023114408.1\|3044274_3046563_+	acylase	NA	NA	NA	NA
WP_003089535.1\|3046743_3047067_+	transcriptional repressor	NA	NA	NA	NA
WP_003124571.1\|3047108_3048029_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023114407.1\|3048125_3049277_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003089526.1\|3049353_3049596_-	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003104944.1\|3049890_3050127_+	hypothetical protein	NA	NA	NA	NA
WP_003089521.1\|3050391_3050862_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_003160318.1\|3050858_3053174_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_003115787.1\|3053590_3054796_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003110901.1\|3054996_3055638_-	response regulator transcription factor	NA	NA	NA	NA
WP_003089513.1\|3055914_3056310_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_003114514.1\|3056332_3056869_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_023114406.1\|3056879_3058883_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	6.9e-43	29.8
WP_023114405.1\|3058889_3059675_-	hypothetical protein	NA	NA	NA	NA
WP_003116944.1\|3059744_3060620_-	hypothetical protein	NA	NA	NA	NA
WP_019681913.1\|3060710_3063260_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	1.2e-76	29.4
WP_003104928.1\|3063261_3064278_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_023114404.1\|3064241_3066035_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_023114403.1\|3066018_3066444_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003089495.1\|3066456_3066954_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003089494.1\|3067027_3068512_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003089493.1\|3068534_3069080_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_059301361.1\|3069288_3069771_+	hypothetical protein	NA	NA	NA	NA
WP_003122697.1\|3069830_3071162_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_5

5005881 : 5095901

102

Pseudomonas_virus(70.21%)

terminase,integrase,head,holin,protease,tail,portal,capsid,plate,tRNA

attL 5029381:5029397|attR 5094281:5094297

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003085581.1\|5005881_5006286_+\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA
WP_003145751.1\|5006384_5007137_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003085577.1\|5007268_5007841_+	hypothetical protein	NA	NA	NA	NA
WP_003123029.1\|5007945_5008686_+	carboxy-S-adenosyl-L-methionine synthase CmoA	A0A1B0XTP2	Freshwater_phage	6.4e-10	26.4
WP_003085573.1\|5008682_5009651_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_003101974.1\|5009741_5010488_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_003101972.1\|5010480_5011182_-	DNA repair protein RecO	NA	NA	NA	NA
WP_003085566.1\|5011242_5012160_-	GTPase Era	NA	NA	NA	NA
WP_003085565.1\|5012152_5012842_-	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.2e-24	31.4
WP_023086589.1\|5012838_5013216_-	DUF4845 domain-containing protein	NA	NA	NA	NA
WP_003101969.1\|5013384_5014239_-	signal peptidase I	NA	NA	NA	NA
WP_023102293.1\|5014244_5016044_-	elongation factor 4	A0A2K9L2P9	Tupanvirus	3.3e-20	38.5
WP_003101964.1\|5016193_5017618_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	3.4e-28	32.0
WP_003110245.1\|5017657_5018113_-	SoxR reducing system RseC family protein	NA	NA	NA	NA
WP_003101960.1\|5018109_5019060_-	sigma factor AlgU regulatory protein MucB	NA	NA	NA	NA
WP_003101958.1\|5019068_5019653_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA
WP_003085543.1\|5019684_5020266_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_003114182.1\|5020674_5022291_+	L-aspartate oxidase	NA	NA	NA	NA
WP_003114181.1\|5022259_5022712_-	hypothetical protein	NA	NA	NA	NA
WP_003085532.1\|5022695_5022950_-	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA
WP_003101947.1\|5023222_5024167_+	folate-binding protein YgfZ	NA	NA	NA	NA
WP_003085528.1\|5024267_5025104_+	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	2.5e-26	36.6
WP_010793854.1\|5025112_5026495_-	sensor histidine kinase	NA	NA	NA	NA
WP_003085524.1\|5026487_5027159_-	response regulator	NA	NA	NA	NA
WP_059301322.1\|5027369_5028653_+	OprD family porin	NA	NA	NA	NA
WP_003085519.1\|5028682_5029666_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
5029381:5029397	attL	NA	NA	NA	NA
WP_023114050.1\|5029714_5030185_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_003120784.1\|5030195_5031713_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_003114172.1\|5031705_5032743_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_003106436.1\|5032869_5033565_-	uracil-DNA glycosylase	A0A0A7D9F8	Equid_alphaherpesvirus	1.0e-49	45.2
WP_003106439.1\|5033664_5034486_-	VanW family protein	NA	NA	NA	NA
WP_003106441.1\|5034542_5035424_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_023114048.1\|5035556_5037065_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_023114047.1\|5037076_5038240_+	isobutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_003085498.1\|5038305_5039124_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_019372102.1\|5039182_5040286_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_023114046.1\|5040397_5041294_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
WP_003085490.1\|5041350_5041995_+	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_003110820.1\|5042110_5042752_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_023112778.1\|5042786_5044763_-	alkyl/aryl-sulfatase	M1I0S7	Paramecium_bursaria_Chlorella_virus	8.1e-161	44.9
WP_003116515.1\|5044865_5045780_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003098351.1\|5045783_5045972_-	hypothetical protein	NA	NA	NA	NA
WP_003085479.1\|5046094_5046340_-	DUF1145 domain-containing protein	NA	NA	NA	NA
WP_003114164.1\|5046456_5046912_-	hypothetical protein	NA	NA	NA	NA
WP_003098355.1\|5047007_5047187_-	hypothetical protein	NA	NA	NA	NA
WP_003114162.1\|5047419_5048496_+	DUF2157 domain-containing protein	NA	NA	NA	NA
WP_003098357.1\|5048492_5049308_+	DUF4824 family protein	NA	NA	NA	NA
WP_003120794.1\|5049328_5049601_+	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_003114159.1\|5049600_5050293_+	16S rRNA pseudouridine(516) synthase	NA	NA	NA	NA
WP_003098363.1\|5050428_5051472_+	L,D-transpeptidase	NA	NA	NA	NA
WP_003114158.1\|5051551_5052289_+	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA
WP_016263849.1\|5052740_5053643_+	(R)-3-hydroxydecanoyl-ACP:CoA transacylase	NA	NA	NA	NA
WP_023114045.1\|5054655_5055711_-\|portal	phage portal protein	Q9ZXM6	Pseudomonas_virus	1.7e-197	97.1
WP_031275675.1\|5055707_5057471_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	0.0e+00	100.0
WP_023089196.1\|5057626_5058448_+\|capsid	GPO family capsid scaffolding protein	Q9ZXM4	Pseudomonas_virus	3.4e-129	99.6
WP_023091259.1\|5058483_5059500_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	1.7e-191	99.4
WP_023114941.1\|5059505_5060207_+\|terminase	terminase endonuclease subunit	Q9ZXM2	Pseudomonas_virus	1.1e-123	98.7
WP_023083460.1\|5060310_5060772_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	3.1e-79	98.0
WP_003098378.1\|5060771_5060984_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.9e-32	94.1
WP_003098379.1\|5061008_5061362_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.0e-59	100.0
WP_003098380.1\|5061363_5061636_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	2.6e-38	97.8
WP_023115051.1\|5061632_5062439_+	N-acetylmuramidase family protein	Q9ZXL6	Pseudomonas_virus	1.0e-141	96.2
WP_016852029.1\|5062435_5062678_+	hypothetical protein	NA	NA	NA	NA
WP_016852030.1\|5062674_5063136_+	peptidase	Q9ZXL5	Pseudomonas_virus	5.3e-63	87.6
WP_016852031.1\|5063213_5063750_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	7.9e-95	98.9
WP_016852032.1\|5063742_5064201_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	7.0e-68	89.5
WP_016852033.1\|5064270_5064843_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	3.6e-93	98.9
WP_016852034.1\|5064839_5065184_+	GPW/gp25 family protein	Q9ZXK9	Pseudomonas_virus	7.9e-56	97.4
WP_023115050.1\|5065180_5066095_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	4.4e-154	94.1
WP_015967199.1\|5066094_5066631_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	1.4e-99	100.0
WP_059301320.1\|5066632_5069023_+\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	0.0e+00	89.3
WP_023115048.1\|5069074_5069536_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	8.5e-37	53.9
WP_023115047.1\|5069626_5070802_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	2.3e-219	98.5
WP_057427955.1\|5070858_5071374_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	7.4e-90	94.2
WP_016852041.1\|5071428_5071758_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	1.5e-48	95.4
WP_003098394.1\|5071766_5071886_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.8e-15	100.0
WP_023115045.1\|5071875_5074635_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	0.0e+00	92.3
WP_003098399.1\|5074640_5075081_+\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	1.8e-76	99.3
WP_023115044.1\|5075077_5076361_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	1.4e-235	97.4
WP_023114951.1\|5076421_5077225_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S5PRR3	Streptococcus_phage	1.5e-44	37.3
WP_023114952.1\|5077221_5078418_-	DGQHR domain-containing protein	NA	NA	NA	NA
WP_124119585.1\|5078414_5078912_-	hypothetical protein	NA	NA	NA	NA
WP_049262809.1\|5079119_5079572_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_020750421.1\|5079616_5079847_+	phage-associated protein, BcepMu gp16 family	NA	NA	NA	NA
WP_031637512.1\|5079876_5080350_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	3.3e-52	69.5
WP_023114954.1\|5080357_5080576_-	hypothetical protein	NA	NA	NA	NA
WP_023089222.1\|5080574_5080766_+	hypothetical protein	NA	NA	NA	NA
WP_003098408.1\|5080768_5081062_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.1e-50	99.0
WP_003098409.1\|5081058_5081409_+	hypothetical protein	NA	NA	NA	NA
WP_023115041.1\|5081480_5081714_+	hypothetical protein	Q9ZXI9	Pseudomonas_virus	2.9e-38	98.7
WP_023115040.1\|5081710_5084431_+	toprim domain-containing protein	Q9ZXI8	Pseudomonas_virus	0.0e+00	99.0
WP_023089226.1\|5084475_5084829_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	2.4e-60	97.4
WP_003098417.1\|5084840_5085047_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	7.3e-33	100.0
WP_023115039.1\|5085350_5087261_+	DNA cytosine methyltransferase	A0A0U1T6D1	Pseudomonas_phage	6.6e-285	94.3
WP_023115038.1\|5087257_5088490_+	phosphoadenosine phosphosulfate reductase family protein	R9TRT5	Rhizobium_phage	7.2e-176	72.1
WP_016852058.1\|5088500_5088677_+	hypothetical protein	Q38017	Pseudomonas_virus	5.5e-05	70.6
WP_016852059.1\|5088673_5089042_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	2.7e-30	50.4
WP_003098423.1\|5089234_5089438_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_023115037.1\|5089444_5090647_-\|integrase	integrase family protein	A0A248SL35	Klebsiella_phage	2.2e-36	30.9
WP_023093099.1\|5091084_5092938_+\|integrase	tyrosine-type recombinase/integrase	A0A0U1UNT3	Pseudomonas_phage	6.5e-104	51.0
WP_013721909.1\|5092973_5093417_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_013721908.1\|5093498_5095901_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.5e-140	41.3
5094281:5094297	attR	NA	NA	NA	NA

DBSCAN-SWA_6

5165726 : 5207385

Cyanophage(12.5%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023115023.1\|5165726_5166821_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_023101524.1\|5167205_5168285_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016446188.1\|5168929_5169307_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012761384.1\|5169591_5169873_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_059301278.1\|5169908_5170478_+	Hsp20/alpha crystallin family protein	A0A1D7SX46	Cyanophage	6.2e-05	27.1
WP_059301272.1\|5170571_5173421_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	1.5e-128	40.9
WP_059301270.1\|5173437_5174868_+	cardiolipin synthase	NA	NA	NA	NA
WP_023093172.1\|5174895_5176779_+\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	5.1e-104	40.9
WP_059301268.1\|5176775_5177216_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	5.8e-11	37.9
WP_059301266.1\|5177370_5180178_+	GGDEF and EAL domain-containing protein	G3MA91	Bacillus_virus	2.3e-28	38.7
WP_023093176.1\|5180361_5180862_+	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_059301264.1\|5180839_5181805_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_059301262.1\|5181829_5182981_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_059301260.1\|5183214_5184123_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_031637502.1\|5184445_5184922_-	hypothetical protein	NA	NA	NA	NA
WP_003120795.1\|5185153_5185447_-	DUF2845 domain-containing protein	NA	NA	NA	NA
WP_003085431.1\|5185786_5186044_+	YjhX family toxin	NA	NA	NA	NA
WP_016253819.1\|5186103_5186610_+	N-acetyltransferase	NA	NA	NA	NA
WP_016253820.1\|5186653_5187049_-	lactoylglutathione lyase	NA	NA	NA	NA
WP_003085421.1\|5187093_5187390_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_016253821.1\|5187505_5188360_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_016253822.1\|5188645_5189425_+	EAL domain-containing protein	NA	NA	NA	NA
WP_003120801.1\|5189517_5190156_+	type B chloramphenicol O-acetyltransferase	M1HS53	Paramecium_bursaria_Chlorella_virus	3.1e-13	32.4
WP_003098436.1\|5190410_5191313_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-11	40.8
WP_003116522.1\|5191346_5191967_+	CatB-related O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	2.2e-27	39.6
WP_003098438.1\|5192093_5193488_+	amidase	NA	NA	NA	NA
WP_003123056.1\|5193558_5194875_+	MFS transporter	NA	NA	NA	NA
WP_003085391.1\|5194953_5195859_+	sterol desaturase family protein	NA	NA	NA	NA
WP_003116524.1\|5195841_5196507_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003098443.1\|5196578_5197565_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003110838.1\|5197574_5198000_-	hypothetical protein	NA	NA	NA	NA
WP_003116526.1\|5197999_5198944_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_003085375.1\|5198948_5199428_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_003116527.1\|5199456_5200119_-	hypothetical protein	NA	NA	NA	NA
WP_003455035.1\|5200153_5201860_-	putative porin	NA	NA	NA	NA
WP_003098450.1\|5201927_5202674_-	energy transducer TonB	NA	NA	NA	NA
WP_003085366.1\|5202682_5203102_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_003110841.1\|5203112_5204960_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_003110842.1\|5204983_5206618_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_003085362.1\|5206782_5207385_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

6227561 : 6318050

Pseudomonas_virus(76.09%)

terminase,head,holin,protease,tRNA,tail,transposase,portal,capsid,plate,integrase

attL 6277736:6277751|attR 6322037:6322052

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003104666.1\|6227561_6228023_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003096050.1\|6228081_6228573_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_023114929.1\|6228609_6228864_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	4.7e-13	43.4
WP_003096058.1\|6228865_6229285_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_003114478.1\|6229609_6231157_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_014603391.1\|6231470_6232289_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_031637483.1\|6232438_6233725_+	murein hydrolase activator EnvC	G9BW84	Planktothrix_phage	2.9e-10	39.8
WP_003123646.1\|6233753_6235064_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	5.0e-26	29.0
WP_003096069.1\|6235063_6235837_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_010793678.1\|6235905_6237387_+	hypothetical protein	NA	NA	NA	NA
WP_003096075.1\|6237423_6238179_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106330.1\|6238328_6239081_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106332.1\|6239171_6239918_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106334.1\|6240089_6240860_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003106336.1\|6240870_6241608_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_003112624.1\|6241656_6241917_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_003096087.1\|6241920_6242559_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003096088.1\|6242558_6243152_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_003112623.1\|6243312_6243711_+	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_003112622.1\|6243747_6243984_+	hypothetical protein	NA	NA	NA	NA
WP_003112621.1\|6243980_6245087_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003105535.1\|6245180_6247433_+	AsmA family protein	NA	NA	NA	NA
WP_004352428.1\|6247429_6248497_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003096100.1\|6248540_6248813_+	oxidative damage protection protein	NA	NA	NA	NA
WP_003112619.1\|6248840_6249923_+	oxidoreductase	NA	NA	NA	NA
WP_023114931.1\|6250207_6251323_+\|integrase	site-specific integrase	W6MYA3	Pseudomonas_phage	4.0e-48	38.4
WP_023114932.1\|6251634_6253713_+	ATP-binding protein	NA	NA	NA	NA
WP_023114933.1\|6254064_6254457_+	hypothetical protein	NA	NA	NA	NA
WP_023114934.1\|6254599_6255262_+	hypothetical protein	NA	NA	NA	NA
WP_023114935.1\|6255280_6256483_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	1.5e-40	30.1
WP_023114936.1\|6257034_6258081_-	hypothetical protein	NA	NA	NA	NA
WP_124033778.1\|6258348_6258684_+	hypothetical protein	NA	NA	NA	NA
WP_023114937.1\|6258684_6260940_-	DotA/TraY family protein	NA	NA	NA	NA
WP_124033779.1\|6260936_6261251_-	hypothetical protein	NA	NA	NA	NA
WP_124033780.1\|6261238_6261487_-	DNA-binding protein	NA	NA	NA	NA
WP_124074571.1\|6262112_6262334_+	hypothetical protein	NA	NA	NA	NA
WP_031637489.1\|6262389_6262842_-	hypothetical protein	NA	NA	NA	NA
WP_086009326.1\|6263390_6264528_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.7e-47	38.7
WP_023114938.1\|6264555_6265902_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_003096148.1\|6266409_6267147_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_023114939.1\|6267305_6267995_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_003096153.1\|6268243_6269017_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-20	31.1
WP_003096156.1\|6269031_6269784_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016562461.1\|6269845_6270541_+	ABC transporter permease	NA	NA	NA	NA
WP_003096163.1\|6270537_6271230_+	ABC transporter permease	NA	NA	NA	NA
WP_010793675.1\|6271298_6272519_+	methyltransferase	NA	NA	NA	NA
WP_003110596.1\|6272917_6273388_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003112617.1\|6273391_6274870_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003105511.1\|6274884_6276069_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003096173.1\|6276079_6277609_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
6277736:6277751	attL	NA	NA	NA	NA
WP_071534457.1\|6278671_6279199_+	SocA family protein	NA	NA	NA	NA
WP_124033784.1\|6279629_6280049_+	hypothetical protein	L7TJK7	Pseudomonas_virus	2.2e-23	38.8
WP_023114940.1\|6280045_6281101_-\|portal	phage portal protein	Q9ZXM6	Pseudomonas_virus	6.0e-195	96.5
WP_031643136.1\|6281100_6282861_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	0.0e+00	99.8
WP_023121181.1\|6283016_6283838_+\|capsid	GPO family capsid scaffolding protein	Q9ZXM4	Pseudomonas_virus	2.2e-128	98.9
WP_016852024.1\|6283873_6284890_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	6.6e-191	99.1
WP_023083461.1\|6284895_6285597_+\|terminase	terminase endonuclease subunit	Q9ZXM2	Pseudomonas_virus	6.2e-124	98.7
WP_023116818.1\|6285700_6286162_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	6.8e-79	97.4
WP_003098378.1\|6286161_6286374_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.9e-32	94.1
WP_003098379.1\|6286398_6286752_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.0e-59	100.0
WP_003098380.1\|6286753_6287026_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	2.6e-38	97.8
WP_023114944.1\|6287022_6287829_+	N-acetylmuramidase family protein	Q9ZXL6	Pseudomonas_virus	9.0e-143	96.9
WP_016852029.1\|6287825_6288068_+	hypothetical protein	NA	NA	NA	NA
WP_016852030.1\|6288064_6288526_+	peptidase	Q9ZXL5	Pseudomonas_virus	5.3e-63	87.6
WP_016852031.1\|6288603_6289140_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	7.9e-95	98.9
WP_023089204.1\|6289132_6289591_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	9.8e-70	91.3
WP_023089205.1\|6289600_6290029_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023089206.1\|6290206_6290779_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	9.7e-91	96.8
WP_023089207.1\|6290775_6291120_+	GPW/gp25 family protein	Q9ZXK9	Pseudomonas_virus	4.6e-56	97.4
WP_023114945.1\|6291116_6292031_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	7.0e-160	96.7
WP_023091255.1\|6292030_6292567_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	3.1e-99	99.4
WP_023114946.1\|6294922_6295387_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	2.3e-42	60.7
WP_023114947.1\|6295477_6296653_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	2.3e-219	98.5
WP_023114948.1\|6296709_6297225_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	2.1e-89	94.2
WP_023083449.1\|6297279_6297609_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	5.3e-49	96.3
WP_003098394.1\|6297617_6297737_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.8e-15	100.0
WP_023114949.1\|6297726_6300474_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	0.0e+00	94.1
WP_003098399.1\|6300479_6300920_+\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	1.8e-76	99.3
WP_023121182.1\|6300916_6302203_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	3.1e-230	96.2
WP_071534455.1\|6302424_6302964_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_031633861.1\|6303086_6303620_+	hypothetical protein	NA	NA	NA	NA
WP_023096284.1\|6303673_6304024_-	hypothetical protein	Q9ZXJ5	Pseudomonas_virus	2.9e-53	89.6
WP_031643138.1\|6304341_6304698_-	helix-turn-helix transcriptional regulator	E5E3P4	Burkholderia_phage	2.0e-06	42.1
WP_031643139.1\|6304782_6304995_+	hypothetical protein	A0A2H4JE67	uncultured_Caudovirales_phage	1.9e-07	46.8
WP_031293865.1\|6305024_6305495_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	2.5e-76	93.6
WP_003098408.1\|6305491_6305785_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.1e-50	99.0
WP_023096288.1\|6305781_6306132_+	hypothetical protein	NA	NA	NA	NA
WP_003098410.1\|6306202_6306436_+	hypothetical protein	Q9ZXI9	Pseudomonas_virus	7.8e-39	100.0
WP_023121183.1\|6306432_6309153_+	toprim domain-containing protein	Q9ZXI8	Pseudomonas_virus	0.0e+00	96.6
WP_023114956.1\|6309197_6309551_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	2.4e-60	97.4
WP_003098417.1\|6309562_6309769_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	7.3e-33	100.0
WP_023114957.1\|6310072_6311758_+	hypothetical protein	L7TH64	Pseudomonas_virus	4.8e-287	90.8
WP_023114958.1\|6311768_6311957_+	hypothetical protein	Q38017	Pseudomonas_virus	7.0e-06	76.5
WP_023114959.1\|6311953_6312166_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_023114960.1\|6312162_6313311_+	hypothetical protein	V9IQN0	Stenotrophomonas_phage	1.8e-72	40.5
WP_023114961.1\|6313603_6313774_+	hypothetical protein	NA	NA	NA	NA
WP_023114962.1\|6313777_6314284_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_023114963.1\|6314819_6316139_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	1.2e-64	34.2
WP_023114964.1\|6317069_6318050_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
6322037:6322052	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP008871.2|WP_003158163.1|4750653_4751028_+|hypothetical-protein

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Acr_ID: NZ_CP008871.2|WP_021205795.1|4752769_4753162_+|hypothetical-protein

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Acr_ID: NZ_CP008871.2|WP_003158159.1|4753180_4753504_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP008871.2|WP_003158163.1|4750653_4751028_+|hypothetical-protein

4750653_4751028_+

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

NZ_CP008871.2|WP_021205795.1|4752769_4753162_+|hypothetical-protein

4752769_4753162_+

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP008871.2|WP_003158159.1|4753180_4753504_+|hypothetical-protein

4753180_4753504_+

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008871

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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Click the colored protein region to show detailed information

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