CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013988	Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 chromosome, complete genome	2 crisprs	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c10_CAS-V-U3	1	13	4	0

1. NZ_CP013988

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013988_1

• CRISPR_ID: NZ_CP013988_1
• CRISPR_location: 362504-362671
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP013988_1

Consensus_repeat	Method
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	PILER-CR
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	CRISPRCasFinder

spacers of NZ_CP013988_1

>1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder
TAGAATGACGGGCTTCCTCCTCAGCTTGCT
>1.2|362606|30|NZ_CP013988|PILER-CR,CRISPRCasFinder
ATGTAGTGAATTCCATTTGTAATGCGTTGT

CRISPR arrays and Neighbor proteins around NZ_CP013988_1

CRISPR arrays

The CRISPR arrays of NZ_CP013988_1

>merge|NZ_CP013988|1|362504-362671|PILER-CR,CRISPRCasFinder
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAACTAGAATGACGGGCTTCCTCCTCAGCTTGCTGTTTGAGGGGCGACAATTTTTGGAGATCACGAAAACATGTAGTGAATTCCATTTGTAATGCGTTGTGTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC

>NZ_CP013988|1|1|362504-362671|PILER-CR
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	TAGAATGACGGGCTTCCTCCTCAGCTTGCT
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	ATGTAGTGAATTCCATTTGTAATGCGTTGT
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC

>NZ_CP013988|1|1|362504-362671|CRISPRCasFinder
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	TAGAATGACGGGCTTCCTCCTCAGCTTGCT
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC	ATGTAGTGAATTCCATTTGTAATGCGTTGT
GTTTGAGGGGCGACAATTTTTGGAGATCACGAAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013988.1|WP_082148263.1|366721_367111_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl|CDD|226180
NZ_CP013988.1|WP_128492279.1|366533_366725_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|198034
NZ_CP013988.1|WP_026465313.1|363418_364102_-|IS6-family-transposase	unknown	unknown	gnl|CDD|225853
NZ_CP013988.1|WP_059348448.1|361462_362110_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348450.1|362758_362944_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_162492204.1|358706_359389_-|IS6-family-transposase	unknown	unknown	gnl|CDD|225853
NZ_CP013988.1|WP_162492205.1|363040_363394_-|hypothetical-protein	unknown	unknown	gnl|CDD|366772
NZ_CP013988.1|WP_002329884.1|365368_366052_-|IS6-like-element-IS1216-family-transposase	unknown	unknown	gnl|CDD|225853
NZ_CP013988.1|WP_082685332.1|359613_359901_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348452.1|364972_365203_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348444.1|353558_354407_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187578
NZ_CP013988.1|WP_059348453.1|366093_366414_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348451.1|364358_364958_+|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl|CDD|273542
NZ_CP013988.1|WP_159025924.1|362119_362455_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348447.1|360379_360721_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348446.1|357516_358146_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_026465862.1|367375_367600_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348445.1|354507_354981_+|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224870
NZ_CP013988.1|WP_059349361.1|355639_356917_+|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl|CDD|225428
NZ_CP013988.1|WP_016897894.1|358190_358385_+|YwbE-family-protein	unknown	unknown	gnl|CDD|274807

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013988.1|WP_128492279.1|366533_366725_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	0.000700599
NZ_CP013988.1|WP_059348451.1|364358_364958_+|thioredoxin-fold-domain-containing-protein	gnl|CDD|273542	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.	4.14215e-07
NZ_CP013988.1|WP_016897894.1|358190_358385_+|YwbE-family-protein	gnl|CDD|274807	TIGR03833, TIGR03833, conserved hypothetical protein. A pair of adjacent genes, ablAB (acetyl-beta-lysine biosynthesis) encodes lysine 2,3-aminomutase and beta-lysine acetyltransferase in methanogenic archaea. Homologous pairs, possibly with identical function, occur in a wide range of species, including Bacillus subtilis. This model describes a conserved hypothetical protein, small in size, with a phylogenetic distribution moderately well correlated to that of the acetyltransferase family. This protein family is also described as DUF2196 and COG4895. The function is unknown. [Hypothetical proteins, Conserved].	1.24183e-29
NZ_CP013988.1|WP_026465313.1|363418_364102_-|IS6-family-transposase	gnl|CDD|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.34252e-92
NZ_CP013988.1|WP_162492204.1|358706_359389_-|IS6-family-transposase	gnl|CDD|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.23463e-91
NZ_CP013988.1|WP_162492205.1|363040_363394_-|hypothetical-protein	gnl|CDD|366772	pfam01719, Rep_2, Plasmid replication protein. This family consists of various bacterial plasmid replication (Rep) proteins. These proteins are essential for replication of plasmids, the Rep proteins are topoisomerases that nick the positive stand at the plus origin of replication and also at the single-strand conversion sequence.	1.97248e-13
NZ_CP013988.1|WP_059349361.1|355639_356917_+|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl|CDD|225428	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism].	0
NZ_CP013988.1|WP_002329884.1|365368_366052_-|IS6-like-element-IS1216-family-transposase	gnl|CDD|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.91937e-92
NZ_CP013988.1|WP_059348445.1|354507_354981_+|Rrf2-family-transcriptional-regulator	gnl|CDD|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	1.98207e-27
NZ_CP013988.1|WP_059348444.1|353558_354407_-|SDR-family-oxidoreductase	gnl|CDD|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.16874e-73
NZ_CP013988.1|WP_082148263.1|366721_367111_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl|CDD|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	1.1584e-29

Protein sequences

>NZ_CP013988.1|WP_159025924.1|362119_362455_+|hypothetical-protein
MIMDISNKNILGYGIWISATLMMTSPYILISLGAIGLLFLAFVLFCEEAYKKQSVLLLLFDTTIMTLSSLLLLILPDNLGIYLNFIGVILLLIAYLAKKWVIKNFLKNNNF
>NZ_CP013988.1|WP_059348448.1|361462_362110_+|hypothetical-protein
MNFKKSLIVGASVLTLAPIASAIFVDTQVQASGNVQNESVMQKDNVVTNAQLEVVRDLEPVFEYFYFDENQNLKISLSDQELGKIYSNNEEGLQTVYSTLERAIPMPKENVKQSSSPFRLAVHSGKVWFHHQDVVATLYGAAVAGPAAVYAALTSLGTFTTGPVGGAVIAALGIIGLPGLNDFVYQILQASANGQGVYIGAEMNGAFPNIVSGTF
>NZ_CP013988.1|WP_059348447.1|360379_360721_+|hypothetical-protein
MKYSNSIMKKCFIPLAISFLGNLWLLTVQASGNQQVYKSILFLIILISLFVALKNIWELLDKKRIKVLFGISLFALVFNTLVISLNFLPSIIVLLIGLFVLYAFGHIFMRYVS
>NZ_CP013988.1|WP_082685332.1|359613_359901_+|hypothetical-protein
MTDEMNNPLYLNWQMTSEKEAIIAELNEKSNAIKNDLPVLLSKYDLRQRWAMTNRQSLYNYTRRKDFPNPIYHFSNGKTPVYLETDIQIFETKYP
>NZ_CP013988.1|WP_162492204.1|358706_359389_-|IS6-family-transposase
MKPFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDSDGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKGPSITSAFKKLKEYGGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKILLGIPA
>NZ_CP013988.1|WP_016897894.1|358190_358385_+|YwbE-family-protein
MSEGNKRSNIQIGSQVKVVQKQDQRSGKLTEGIVGKILTNSQNHPHGIKVMLEDGTVGRVKEIL
>NZ_CP013988.1|WP_059348446.1|357516_358146_+|hypothetical-protein
MHTYVKAVPTQASLFKPINVSVQDARIEGETVLRVTKNQDIKEDDEATYARLIDANFQDGVIEVKVLSRLLADAPDHARGFIGLVFRVNDTDSAFESFYIRPTNGRSNQQLRRNRSTQYFSYPNFKYFHSRESNPGEYESYVDIGLDEWIDLKIVVQGNYGELYVNNANQPVLIVNDLKHGFSSGSIGLFVDIGTEGFFKDLKYTPAEV
>NZ_CP013988.1|WP_059349361.1|355639_356917_+|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MTKDYKIETQAIHAAQTIDETGSRAVPLHQTTAYVFDDVAQGANRFALAEGGNIYTRITNPTQGVFEGRVAALEGGSAGLAVASGMAAITYAIQVLAKAGDHIVATANLYGGSHNLFEHTFKDFGIDVTIVDTSDLANVDKAIQDNTKAVFVETIGNPAGNIEDISGLAEVAHKHGIPLIVDNTFATPYLARPIEHGADIVVHSATKFIGGHGTSIGGVIVESGQFDWKQNDKFPGLSQADPTYNDLVFADAFGPAAYTTKIRATLLRDTGASISPFNAWLLVQGLESLHVRMDRHVENAEKVATFLAQHDKVEWVDYAGLESSPYYSLKEKYLPLGAGSIFTFGVKGGYEGGVKFIENLELFSLLANVGDAKSLVVHPASMTHSQLTEEELAEGGIKPETIRLSIGIENVDDIIADLDNALAAI
>NZ_CP013988.1|WP_059348445.1|354507_354981_+|Rrf2-family-transcriptional-regulator
MKHSVKFSDAIHILVYIEMLQGTDLSSEVIAKSVNANPVSVRRIMSSLKKADLITSQSGKANPKLSRDPENISFYDIYQAIDEEQQIFRVDEKTAPACIVGGNIQGVLAEKYDQLQRSVELEMQQINLGDIIHSVSQSANQSELNDEETKQILQRFL
>NZ_CP013988.1|WP_059348444.1|353558_354407_-|SDR-family-oxidoreductase
MKYLVTGATGAFGGLALDKLKTLVPVSDIHILARSEEKAAPLAEDGYTVHIGDYLDKASLKAAFTGIDRLLLVSSAPGTRQEEHQNAIDAAKEAGVSFITYTSFARADQSSADLATDHRYTEKAIKASGIPFTILRNNWYLENELPLVGAALNSGKLLFTAENGKAGWALRREYAEAAAIVLAGEKTFPEILELSGKPVDYANLTKALAEAIGKEIAPLETNDEAFVKNLTDNQLPEPVAGFFLAIQGDIKNGVLDVQSDDFEKVLGKPLTPLVDAFKELLQ
>NZ_CP013988.1|WP_059348450.1|362758_362944_-|hypothetical-protein
MKGKRKYIYLILLILYSIANRVIPLEYQYLVYIFMVFMILYVFFSDIIFDWLKNKNNKKRS
>NZ_CP013988.1|WP_162492205.1|363040_363394_-|hypothetical-protein
MLYLKLCNRTHKALYNAKDIKLLNNFDIDRYIVLDVEDKDDILNDICDLIDEQGLANIRELRRFVKTHGTEYNLPSMKILNSVLRSHTGLLRLYFDAVYQERRYGRSDFDKETGEIK
>NZ_CP013988.1|WP_026465313.1|363418_364102_-|IS6-family-transposase
MKPFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
>NZ_CP013988.1|WP_059348451.1|364358_364958_+|thioredoxin-fold-domain-containing-protein
MIRKKILLISCLSILALTACGVDNNQETSSNSNESIAQSEDQEQTESAIQDYQNVVKNFTTVTAREVTDKINNGDAFYLFIGKDTCPYCREFAPKLEEASTIFESANSEDISVEPKIYYLDLSNIDDLSEEDNQFTMEFTNKYDIDSVPAFQYFEGQIYHSEIEDIDSNKITVDEIKEFINTPYDDEDVTTAPDTNAED
>NZ_CP013988.1|WP_059348452.1|364972_365203_+|hypothetical-protein
MKKDMKKKLIQNLLIIFSIVSVAFSAEYFFTEQKAEAVVCEVGPCPCGKVYKKSAAMWSPGARQDTVGSCVWPNQL
>NZ_CP013988.1|WP_002329884.1|365368_366052_-|IS6-like-element-IS1216-family-transposase
MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
>NZ_CP013988.1|WP_059348453.1|366093_366414_+|hypothetical-protein
MIVDLKLCNRTVYDLKLHSKTTGPQKYRILTTKKPNEIAHTWVGEKSGTDWLKEHALTAFVEKHPEITSPQEKIATLEKTIAGEAQPFNHFMKETRERTSQTELRY
>NZ_CP013988.1|WP_128492279.1|366533_366725_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MITTLPPDVLQQLNLNVGDSIEYVIKGGHVEIRKAAEKEDDFLATVNAVMDDYTVALEGLVSR
>NZ_CP013988.1|WP_082148263.1|366721_367111_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MIRYLTERELVMINTLQIQRYSPEEQIGVKEPTALNMCVALPKQDVFDKELYPTLFDKAAILYQKLVQKHCFHNANKRTALVAVHTFLRLNGVTLNVSNKEIEDYTVAIATDKDLTWEAISSWLEVHSK
>NZ_CP013988.1|WP_026465862.1|367375_367600_+|hypothetical-protein
MTVQDVVEIDICYNDYFIEVFTIEYGDLESLIQSLKNDKQKSFVLSNKTFFKKDLNSVSIVDHGLGFIFIDVND

Crispr_ID: NZ_CP013988_2

• CRISPR_ID: NZ_CP013988_2
• CRISPR_location: 741237-743826
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 42 spacers
• Cas_protein_info: cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

Consensus repeat of NZ_CP013988_2

Consensus_repeat	Method
GTAGTCCCCGCACCAGCGGGGGTGATCC	CRISPRCasFinder
GTAGTCNCCCGCACCAGCGGGGGTGATCC	CRT

spacers of NZ_CP013988_2

>2.1|741265|33|NZ_CP013988|CRISPRCasFinder,CRT
TGCTTTATGATTTTGTAAATCTTCAATCAACAT
>2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT
CGACCAATAGCACCACCTGAAGCCAATGCTGTT
>2.3|741387|33|NZ_CP013988|CRISPRCasFinder,CRT
CGGTCAAATTGACGTTGCTATGCGTGATAACGA
>2.4|741448|33|NZ_CP013988|CRISPRCasFinder,CRT
TTGGGGAGTGGAATTCAAGCCTCGCATGGTATT
>2.5|741509|33|NZ_CP013988|CRISPRCasFinder,CRT
TGAAACAATGGAATTCTTTAGATAGTACATTAC
>2.6|741570|33|NZ_CP013988|CRISPRCasFinder,CRT
TGGGAAAGATTGGTCAAAAGAAGCGATTGCTGC
>2.7|741631|33|NZ_CP013988|CRISPRCasFinder,CRT
TGTAATGGTGGGGTGATTGAATGGTTTGGGTAA
>2.8|741692|33|NZ_CP013988|CRISPRCasFinder,CRT
CCGTACATTGCAAAAGGATAACTCGAATTTATA
>2.9|741753|33|NZ_CP013988|CRISPRCasFinder,CRT
CAAGCAATTTTGAAACAAAACAAGGTGAAACAA
>2.10|741814|33|NZ_CP013988|CRISPRCasFinder,CRT
TCGCATCAAGTGCTTCATAGTTACCCATCATAC
>2.11|741875|33|NZ_CP013988|CRISPRCasFinder,CRT
TATACAGTGTTTGACCTACTGAAATCTTATCCT
>2.12|741936|33|NZ_CP013988|CRISPRCasFinder,CRT
TAGCAGGAAGCTGGGTCAGGTCTTCGGGGTCTG
>2.13|741997|33|NZ_CP013988|CRISPRCasFinder,CRT
TTTACACACTACACTTATGTGGCGGAAGCTGGA
>2.14|742058|33|NZ_CP013988|CRISPRCasFinder,CRT
CCAATGCTAGACCAGCCACCAACTGATGAAGCA
>2.15|742119|33|NZ_CP013988|CRISPRCasFinder,CRT
TCTAGCTAAGTAGTCGTAATAGCTAGGAGCGTT
>2.16|742180|33|NZ_CP013988|CRISPRCasFinder,CRT
TGTCAGTGAATCGTTAAGGTATGATCCACCTTT
>2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT
TATTGATAACGTTGATTTAAGTGAATTGTTAAA
>2.18|742302|33|NZ_CP013988|CRISPRCasFinder,CRT
CAATACAAGTGGAAACAGTAACGATTCATCAAA
>2.19|742363|33|NZ_CP013988|CRISPRCasFinder,CRT
CTGATCTTTGGAAGTAAGCAAGAAAAGTATACA
>2.20|742424|33|NZ_CP013988|CRISPRCasFinder,CRT
CTAACTACCTAGCTAAATCAACTTATGAACGTG
>2.21|742485|33|NZ_CP013988|CRISPRCasFinder,CRT
CATTGCCGTCCGCAGCCGATGATAATTCAAAAG
>2.22|742546|33|NZ_CP013988|CRISPRCasFinder,CRT
CAAGCGGGTCTTTGTTATTCAGACAAGGGCATC
>2.23|742607|33|NZ_CP013988|CRISPRCasFinder,CRT
CAAGTATGAGTTCGAGCCGAAGTATGACAAACA
>2.24|742668|33|NZ_CP013988|CRISPRCasFinder,CRT
TGATATTGAATAACTTTAGTTCACTTAAAATAG
>2.25|742729|33|NZ_CP013988|CRISPRCasFinder,CRT
CATCATCGTTTGTAGGAACATCATCTTCAATTT
>2.26|742790|33|NZ_CP013988|CRISPRCasFinder,CRT
TGTCCAAGAAGAATTTGAAATCAAGGGGATGTT
>2.27|742851|33|NZ_CP013988|CRISPRCasFinder,CRT
CAAGGTAGGTCAAGGGCGTGACACGATTCACTT
>2.28|742912|33|NZ_CP013988|CRISPRCasFinder,CRT
CCGTTTTGACTGGTTAGCAAAGGAACAAGATTT
>2.29|742973|33|NZ_CP013988|CRISPRCasFinder,CRT
TTTGACGGTATCAATTTTTATGACTATTTAAAA
>2.30|743034|33|NZ_CP013988|CRISPRCasFinder,CRT
CCAAAGAATAATGTATTAAGCGAATTTGAACAA
>2.31|743095|33|NZ_CP013988|CRISPRCasFinder,CRT
TGCGACGGTCCCAGAAGCGGAAGCAGTCACAGC
>2.32|743156|33|NZ_CP013988|CRISPRCasFinder,CRT
CGGTCTAATTACGCACACAGTTAGTGGAGTTTA
>2.33|743217|33|NZ_CP013988|CRISPRCasFinder,CRT
TGATTTACCGTCCGAACGGTTCGAAATAGATAT
>2.34|743278|33|NZ_CP013988|CRISPRCasFinder,CRT
CCAGCCAGAAAGCACAGAGCTTACTACGGAAAA
>2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT
CAACACAAATGAATTTGCATTACAAATTGATAC
>2.36|743400|33|NZ_CP013988|CRISPRCasFinder,CRT
TGGTGCAACAGGTAAAGACTCACTAACTCCAGA
>2.37|743461|33|NZ_CP013988|CRISPRCasFinder,CRT
TGATCAACGTAAAATACTACATTATCTTCTTTA
>2.38|743522|34|NZ_CP013988|CRISPRCasFinder,CRT
CCGATGAAACTTGTTAACCACATAACGTTAAAGT
>2.39|743584|33|NZ_CP013988|CRISPRCasFinder,CRT
CGTGGCTTGGGACTTTGGAACGAACTGGTCAAA
>2.40|743645|33|NZ_CP013988|CRISPRCasFinder,CRT
CAAACGATACGGTTTACAACTTGAAGCGATATA
>2.41|743706|33|NZ_CP013988|CRISPRCasFinder,CRT
TAAGTTAGGTGATACTTTTGTTTCGTAAGTTAC
>2.42|743767|32|NZ_CP013988|CRT
TAGCCACCGATACCAATTGCAATGTTTGCTAC

CRISPR arrays and Neighbor proteins around NZ_CP013988_2

CRISPR arrays

The CRISPR arrays of NZ_CP013988_2

>merge|NZ_CP013988|2|741237-743826|CRISPRCasFinder,CRT
GTAGTCCCCGCACCAGCGGGGGTGATCCTGCTTTATGATTTTGTAAATCTTCAATCAACATGTAGTCCCCGCACCAGCGGGGGTGATCCCGACCAATAGCACCACCTGAAGCCAATGCTGTTGTAGTCCCCGCACCAGCGGGGGTGATCCCGGTCAAATTGACGTTGCTATGCGTGATAACGAGTAGTCCCCGCACCAGCGGGGGTGATCCTTGGGGAGTGGAATTCAAGCCTCGCATGGTATTGTAGTCCCCGCACCAGCGGGGGTGATCCTGAAACAATGGAATTCTTTAGATAGTACATTACGTAGTCCCCGCACCAGCGGGGGTGATCCTGGGAAAGATTGGTCAAAAGAAGCGATTGCTGCGTAGTCCCCGCACCAGCGGGGGTGATCCTGTAATGGTGGGGTGATTGAATGGTTTGGGTAAGTAGTCCCCGCACCAGCGGGGGTGATCCCCGTACATTGCAAAAGGATAACTCGAATTTATAGTAGTCCCCGCACCAGCGGGGGTGATCCCAAGCAATTTTGAAACAAAACAAGGTGAAACAAGTAGTCCCCGCACCAGCGGGGGTGATCCTCGCATCAAGTGCTTCATAGTTACCCATCATACGTAGTCCCCGCACCAGCGGGGGTGATCCTATACAGTGTTTGACCTACTGAAATCTTATCCTGTAGTCCCCGCACCAGCGGGGGTGATCCTAGCAGGAAGCTGGGTCAGGTCTTCGGGGTCTGGTAGTCCCCGCACCAGCGGGGGTGATCCTTTACACACTACACTTATGTGGCGGAAGCTGGAGTAGTCCCCGCACCAGCGGGGGTGATCCCCAATGCTAGACCAGCCACCAACTGATGAAGCAGTAGTCCCCGCACCAGCGGGGGTGATCCTCTAGCTAAGTAGTCGTAATAGCTAGGAGCGTTGTAGTCCCCGCACCAGCGGGGGTGATCCTGTCAGTGAATCGTTAAGGTATGATCCACCTTTGTAGTCCCCGCACCAGCGGGGGTGATCCTATTGATAACGTTGATTTAAGTGAATTGTTAAAGTAGTCCCCGCACCAGCGGGGGTGATCCCAATACAAGTGGAAACAGTAACGATTCATCAAAGTAGTCCCCGCACCAGCGGGGGTGATCCCTGATCTTTGGAAGTAAGCAAGAAAAGTATACAGTAGTCCCCGCACCAGCGGGGGTGATCCCTAACTACCTAGCTAAATCAACTTATGAACGTGGTAGTCCCCGCACCAGCGGGGGGGATCCCATTGCCGTCCGCAGCCGATGATAATTCAAAAGGTAGTCCCCGCACCAGCGGGGGTGATCCCAAGCGGGTCTTTGTTATTCAGACAAGGGCATCGTAGTCCCCGCACCAGCGGGGGTGATCCCAAGTATGAGTTCGAGCCGAAGTATGACAAACAGTAGTCCCCGCACCAGCGGGGGTGATCCTGATATTGAATAACTTTAGTTCACTTAAAATAGGTAGTCCCCGCACCAGCGGGGGTGATCCCATCATCGTTTGTAGGAACATCATCTTCAATTTGTAGTCCCCGCACCAGCGGGGGTGATCCTGTCCAAGAAGAATTTGAAATCAAGGGGATGTTGTAGTCCCCGCACCAGCGGGGGTGATCCCAAGGTAGGTCAAGGGCGTGACACGATTCACTTGTAGTCCCCGCACCAGCGGGGGTGATCCCCGTTTTGACTGGTTAGCAAAGGAACAAGATTTGTAGTCCCCGCACCAGCGGGGGTGATCCTTTGACGGTATCAATTTTTATGACTATTTAAAAGTAGTCCCCGCACCAGCGGGGGTGATCCCCAAAGAATAATGTATTAAGCGAATTTGAACAAGTAGTCCCCGCACCAGCGGGGGTGATCCTGCGACGGTCCCAGAAGCGGAAGCAGTCACAGCGTAGTCCCCGCACCAGCGGGGGTGATCCCGGTCTAATTACGCACACAGTTAGTGGAGTTTAGTAGTCCCCGCACCAGCGGGGGTGATCCTGATTTACCGTCCGAACGGTTCGAAATAGATATGTAGTCCCCGCACCAGCGGGGGTGATCCCCAGCCAGAAAGCACAGAGCTTACTACGGAAAAGTAGTCCCCGCACCAGCGGGGGTGATCCCAACACAAATGAATTTGCATTACAAATTGATACGTAGTCCCCGCACCAGCGGGGGTGATCCTGGTGCAACAGGTAAAGACTCACTAACTCCAGAGTAGTCCCCGCACCAGCGGGGGTGATCCTGATCAACGTAAAATACTACATTATCTTCTTTAGTAGTCCCCGCACCAGCGGGGGGTGATCCCGATGAAACTTGTTAACCACATAACGTTAAAGTGTAGTCCCCGCACCAGCGGGGGTGATCCCGTGGCTTGGGACTTTGGAACGAACTGGTCAAAGTAGTCCCCGCACCAGCGGGGGTGATCCCAAACGATACGGTTTACAACTTGAAGCGATATAGTAGTCCCCGCACCAGCGGGGGTGATCCTAAGTTAGGTGATACTTTTGTTTCGTAAGTTACGTAGTCCCCGCACCAGCGGGGGGATCCCTAGCCACCGATACCAATTGCAATGTTTGCTACGTAGTCCCCCGCACCAGCGGGGGAGGGG

>NZ_CP013988|2|2|741237-743766|CRISPRCasFinder
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGCTTTATGATTTTGTAAATCTTCAATCAACAT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGACCAATAGCACCACCTGAAGCCAATGCTGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGGTCAAATTGACGTTGCTATGCGTGATAACGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTGGGGAGTGGAATTCAAGCCTCGCATGGTATT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGAAACAATGGAATTCTTTAGATAGTACATTAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGGGAAAGATTGGTCAAAAGAAGCGATTGCTGC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTAATGGTGGGGTGATTGAATGGTTTGGGTAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCGTACATTGCAAAAGGATAACTCGAATTTATA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGCAATTTTGAAACAAAACAAGGTGAAACAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TCGCATCAAGTGCTTCATAGTTACCCATCATAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TATACAGTGTTTGACCTACTGAAATCTTATCCT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TAGCAGGAAGCTGGGTCAGGTCTTCGGGGTCTG
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTTACACACTACACTTATGTGGCGGAAGCTGGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAATGCTAGACCAGCCACCAACTGATGAAGCA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TCTAGCTAAGTAGTCGTAATAGCTAGGAGCGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTCAGTGAATCGTTAAGGTATGATCCACCTTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TATTGATAACGTTGATTTAAGTGAATTGTTAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAATACAAGTGGAAACAGTAACGATTCATCAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CTGATCTTTGGAAGTAAGCAAGAAAAGTATACA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CTAACTACCTAGCTAAATCAACTTATGAACGTG
GTAGTCCCCGCACCAGCGGGGGGGATCC	CATTGCCGTCCGCAGCCGATGATAATTCAAAAG
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGCGGGTCTTTGTTATTCAGACAAGGGCATC
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGTATGAGTTCGAGCCGAAGTATGACAAACA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATATTGAATAACTTTAGTTCACTTAAAATAG
GTAGTCCCCGCACCAGCGGGGGTGATCC	CATCATCGTTTGTAGGAACATCATCTTCAATTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTCCAAGAAGAATTTGAAATCAAGGGGATGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGGTAGGTCAAGGGCGTGACACGATTCACTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCGTTTTGACTGGTTAGCAAAGGAACAAGATTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTTGACGGTATCAATTTTTATGACTATTTAAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAAAGAATAATGTATTAAGCGAATTTGAACAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGCGACGGTCCCAGAAGCGGAAGCAGTCACAGC
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGGTCTAATTACGCACACAGTTAGTGGAGTTTA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATTTACCGTCCGAACGGTTCGAAATAGATAT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAGCCAGAAAGCACAGAGCTTACTACGGAAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAACACAAATGAATTTGCATTACAAATTGATAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGGTGCAACAGGTAAAGACTCACTAACTCCAGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATCAACGTAAAATACTACATTATCTTCTTTA
GTAGTCCCCGCACCAGCGGGGGGTGATC	CCGATGAAACTTGTTAACCACATAACGTTAAAGT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGTGGCTTGGGACTTTGGAACGAACTGGTCAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAACGATACGGTTTACAACTTGAAGCGATATA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TAAGTTAGGTGATACTTTTGTTTCGTAAGTTAC
GTAGTCCCCGCACCAGCGGGGGGATCCC

>NZ_CP013988|2|1|741237-743826|CRT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGCTTTATGATTTTGTAAATCTTCAATCAACAT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGACCAATAGCACCACCTGAAGCCAATGCTGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGGTCAAATTGACGTTGCTATGCGTGATAACGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTGGGGAGTGGAATTCAAGCCTCGCATGGTATT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGAAACAATGGAATTCTTTAGATAGTACATTAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGGGAAAGATTGGTCAAAAGAAGCGATTGCTGC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTAATGGTGGGGTGATTGAATGGTTTGGGTAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCGTACATTGCAAAAGGATAACTCGAATTTATA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGCAATTTTGAAACAAAACAAGGTGAAACAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TCGCATCAAGTGCTTCATAGTTACCCATCATAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TATACAGTGTTTGACCTACTGAAATCTTATCCT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TAGCAGGAAGCTGGGTCAGGTCTTCGGGGTCTG
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTTACACACTACACTTATGTGGCGGAAGCTGGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAATGCTAGACCAGCCACCAACTGATGAAGCA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TCTAGCTAAGTAGTCGTAATAGCTAGGAGCGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTCAGTGAATCGTTAAGGTATGATCCACCTTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TATTGATAACGTTGATTTAAGTGAATTGTTAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAATACAAGTGGAAACAGTAACGATTCATCAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CTGATCTTTGGAAGTAAGCAAGAAAAGTATACA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CTAACTACCTAGCTAAATCAACTTATGAACGTG
GTAGTCCCCGCACCAGCGGGGGGGATCC	CATTGCCGTCCGCAGCCGATGATAATTCAAAAG
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGCGGGTCTTTGTTATTCAGACAAGGGCATC
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGTATGAGTTCGAGCCGAAGTATGACAAACA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATATTGAATAACTTTAGTTCACTTAAAATAG
GTAGTCCCCGCACCAGCGGGGGTGATCC	CATCATCGTTTGTAGGAACATCATCTTCAATTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGTCCAAGAAGAATTTGAAATCAAGGGGATGTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAGGTAGGTCAAGGGCGTGACACGATTCACTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCGTTTTGACTGGTTAGCAAAGGAACAAGATTT
GTAGTCCCCGCACCAGCGGGGGTGATCC	TTTGACGGTATCAATTTTTATGACTATTTAAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAAAGAATAATGTATTAAGCGAATTTGAACAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGCGACGGTCCCAGAAGCGGAAGCAGTCACAGC
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGGTCTAATTACGCACACAGTTAGTGGAGTTTA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATTTACCGTCCGAACGGTTCGAAATAGATAT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CCAGCCAGAAAGCACAGAGCTTACTACGGAAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAACACAAATGAATTTGCATTACAAATTGATAC
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGGTGCAACAGGTAAAGACTCACTAACTCCAGA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TGATCAACGTAAAATACTACATTATCTTCTTTA
GTAGTCCCCGCACCAGCGGGGGGTGATC	CCGATGAAACTTGTTAACCACATAACGTTAAAGT
GTAGTCCCCGCACCAGCGGGGGTGATCC	CGTGGCTTGGGACTTTGGAACGAACTGGTCAAA
GTAGTCCCCGCACCAGCGGGGGTGATCC	CAAACGATACGGTTTACAACTTGAAGCGATATA
GTAGTCCCCGCACCAGCGGGGGTGATCC	TAAGTTAGGTGATACTTTTGTTTCGTAAGTTAC
GTAGTCCCCGCACCAGCGGGGGGATCCC	TAGCCACCGATACCAATTGCAATGTTTGCTAC
GTAGTCCCCCGCACCAGCGGGGGAGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013988.1|WP_059348710.1|751207_752605_+|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl|CDD|225343
NZ_CP013988.1|WP_059348704.1|744354_744678_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348700.1|738079_738793_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl|CDD|187824
NZ_CP013988.1|WP_059348702.1|739435_740380_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
NZ_CP013988.1|WP_159025931.1|744893_745247_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013988.1|WP_059348711.1|753132_755160_+|BglG-family-transcription-antiterminator	unknown	unknown	gnl|CDD|226234
NZ_CP013988.1|WP_059348707.1|746986_747991_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP013988.1|WP_059349371.1|736429_737017_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl|CDD|378191
NZ_CP013988.1|WP_059348708.1|748097_749081_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381304
NZ_CP013988.1|WP_059348696.1|730360_731632_+|ClC-family-H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl|CDD|238504
NZ_CP013988.1|WP_059348698.1|734686_736384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl|CDD|378189
NZ_CP013988.1|WP_026466307.1|749894_751205_+|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl|CDD|224372
NZ_CP013988.1|WP_026466305.1|752648_752960_+|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl|CDD|99906
NZ_CP013988.1|WP_059348706.1|745274_746690_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143456
NZ_CP013988.1|WP_059348709.1|749202_749604_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133384
NZ_CP013988.1|WP_059348701.1|738792_739434_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
NZ_CP013988.1|WP_159025930.1|740388_741213_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NZ_CP013988.1|WP_059348699.1|737006_738068_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP013988.1|WP_059348695.1|729888_730248_+|50S-ribosomal-protein-L19	unknown	unknown	gnl|CDD|235418
NZ_CP013988.1|WP_082685380.1|731958_734700_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP013988.1|WP_059348698.1|734686_736384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	5e-75	248.0	0.0
NZ_CP013988.1|WP_059348702.1|739435_740380_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	1.2e-102	337.3	0.1
NZ_CP013988.1|WP_059348701.1|738792_739434_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	1.9e-51	169.9	0.0
NZ_CP013988.1|WP_159025930.1|740388_741213_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	1.2e-27	90.7	0.0
NZ_CP013988.1|WP_059349371.1|736429_737017_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	1.4e-60	199.0	3.1
NZ_CP013988.1|WP_059348700.1|738079_738793_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	2.9e-41	135.9	0.0
NZ_CP013988.1|WP_082685380.1|731958_734700_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	5.8e-67	220.9	0.8
NZ_CP013988.1|WP_059348699.1|737006_738068_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	4.2e-103	340.4	0.9

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013988.1|WP_059348710.1|751207_752605_+|glycoside-hydrolase-family-1-protein	gnl|CDD|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	7.10785e-144
NZ_CP013988.1|WP_059348700.1|738079_738793_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.73879e-40
NZ_CP013988.1|WP_059348702.1|739435_740380_+|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.7208e-126
NZ_CP013988.1|WP_059348711.1|753132_755160_+|BglG-family-transcription-antiterminator	gnl|CDD|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	6.14224e-46
NZ_CP013988.1|WP_059348707.1|746986_747991_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.0815e-41
NZ_CP013988.1|WP_059349371.1|736429_737017_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.51796e-31
NZ_CP013988.1|WP_059348708.1|748097_749081_+|aldo/keto-reductase	gnl|CDD|381304	cd19078, AKR_AKR13C1_2, AKR13C family of aldo-keto reductase (AKR). The AKR13C family includes Helicobacter pyroli aldehyde reductase (AKR13C1) and Thermotoga maritima aldo-keto reductase (AKR13C2). Aldehyde reductase (EC 1.1.1.21), also called aldose reductase, is a cytosolic NADPH-dependent oxidoreductase that catalyzes the reduction of a variety of aldehydes and carbonyls, including monosaccharides.	3.49619e-167
NZ_CP013988.1|WP_059348696.1|730360_731632_+|ClC-family-H(+)/Cl(-)-exchange-transporter	gnl|CDD|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	2.16229e-110
NZ_CP013988.1|WP_059348698.1|734686_736384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	7.53052e-79
NZ_CP013988.1|WP_026466307.1|749894_751205_+|PTS-sugar-transporter-subunit-IIC	gnl|CDD|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	5.67815e-124
NZ_CP013988.1|WP_026466305.1|752648_752960_+|PTS-sugar-transporter-subunit-IIB	gnl|CDD|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	1.55305e-37
NZ_CP013988.1|WP_059348709.1|749202_749604_+|MerR-family-transcriptional-regulator	gnl|CDD|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	9.05385e-49
NZ_CP013988.1|WP_059348701.1|738792_739434_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.38892e-75
NZ_CP013988.1|WP_159025930.1|740388_741213_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	4.7855e-33
NZ_CP013988.1|WP_059348699.1|737006_738068_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.0788e-144
NZ_CP013988.1|WP_059348706.1|745274_746690_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143456	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.	0
NZ_CP013988.1|WP_059348695.1|729888_730248_+|50S-ribosomal-protein-L19	gnl|CDD|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	6.84885e-70
NZ_CP013988.1|WP_082685380.1|731958_734700_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.4149e-91

Protein sequences

>NZ_CP013988.1|WP_159025930.1|740388_741213_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVITVRNAPNSLRGDLTKWMQEISTGVYIGNFNSRIRAELWGRVIESVQGGEATLSYYARSENGYEFETYNTNRKRVDYDGIPLVLIPTDTKMTQELKGGFSNASKFHKGRQMAKIHEENVQITLDFIAIDITVMNNMIREISAIKTVNDELTEFMVKIENESNDSSELKLYLTEFVSFVEDLPIVGYDFGLEFQALNTLLSKQGLNLLPNSVIDLVRLVKKENPFLQNYKIMTVMESFGIENNESQSFLLNARMIKVLANKLNKFRQIISRG
>NZ_CP013988.1|WP_059348702.1|739435_740380_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MNKKQSGAKKTSLRELPRIGDRVSFLYIEHAKVNRQESAITVSDARGTVKIPAAMIGVLLFGPGTDVTHRAMELIGDTGTSVVWVGERGVRHYAHGRALAHTTSFLEKQAKLVSNKRSRLAVARKMYQMRFPGEDVSNLTMQQLRGREGARVRKVYREYSKLYQVPWERREYTPDDFDASSPVNQALSATNVALYGIVYSVIVALGISPGLGFVHTGHDLSFVYDLADLYKAELTIPLSFKIASELDSEDDIGRISRLKLRDALVDGKMMKRIVNDVQFLLEIDIDEFIDIDTINLWDDKELHVKYGFNYSERD
>NZ_CP013988.1|WP_059348701.1|738792_739434_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVEIDKENRQKIKDLNHLGAYHSWVEECFPHEISEETRSRKLWRIDQLNGKEYLLIVSRNQPDKQRLEKYGVGESGQTKDYTPLLNSIKEGQRLRFRATLNPVQSIHTGAENQKRGRIVPHITHDQQLKFLIDRAEKNGFLLNVDEVTIVGRNYSILKKSGSRGVRISQVSYEGVLTVTDVEKFTNILIHGLGKKKAYGCGLVTVIPGE
>NZ_CP013988.1|WP_059348700.1|738079_738793_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKSILLKCSGPLQSWGTDSSFETRKSDPHPSKSAMIGLISASLGLTRDDQARISELNNLDFAVRIDQPGRLLRDYHTAHKYKPNGDLERTYVTNRYYIEDAVFVVGLGSDNAQLIDEVWEALHKPYFQQFLGRKSLPPTADFLIDSFDMGVVDAMKSLPWQAANWYINKNQKGSLVLYADADLVDSKMITRRRDSVASFSQKNRQFKFRSEARIQIDLSNDSSHEIQHDAFGALGDG
>NZ_CP013988.1|WP_059348699.1|737006_738068_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNNKKLFLDIHAIQAVPPSNINRDDSGSPKTAQYGGVRRSRVSSQSWKRAIRKYFNEESAAENVGIRSLDIVEYLAHKIIENAADIDQDEAIKLAEATFNNAGVKTKEGKVKALFFLGEYQANNLAKAAIDGEKDKKKLKDILSDTPALDIALFGRMVADDPSLNEDASAQVAHAISTHAVQTEFDFYTALDDLAKEDTSGAGMLGTTEFNSSTLYRYANVAIHDFDKQVNNNETLVKSLQLFIKAFSNSMPTGKVNSFANQTLPSSLLVSVRSDRPVNLVTAFEQPVESTAKGYIHSSVDALVKEYNKIQGFVDEPVFMLNLGADGLGDNFTKLSDMLNEFGEKLSQQLSDE
>NZ_CP013988.1|WP_059349371.1|736429_737017_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSKILGELDRRREEGSTRALMANLRNSIGKDFSQTVEVWPIMFQYLPAEYLSKNGIVTKSERAILSALQLYAIYQQGIRDSVLIDREGYNHQNFASSLKRIRDVDDSVALDRRFNALITSSTYEEFFHHLKQMIQLLKAGTKAVNIEKINFASLAADLYEIQKADGREKVRLRWAQNYYYQENYSKVEGESSNEQ
>NZ_CP013988.1|WP_059348698.1|734686_736384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGKFNLIDEPWVKVFVNEKSQTDMVSLKELFDNAKNFKALAGDSYAQDFAVLRILLSVLHTVYSRYDTTDEPYNYMTLDDKSCVVKTHSDDMQMKRQYRKQLLNTWESLWEEKRFSEAVNDYLVQWHDHFYLFDDQFPFMQITKEELDSFPLSKAKPSSVSGKSINRLISESGNKIALFSPKYHSNKEFLNADEVARWLITYHGYTSLSDKVIFGSEKYKASKGWLFDIGGIYLSGENLFETLMLNLILVHPYEQFNYNIETPAWEFSGKEKIEHYLNKSDPDNLADLYTNWSRAVIIEPNYEPSKPFSLEIVKLPEINHKDNFLEPMTMWRFNRQGDAKGSFTPRKHVENEAIWRSFSLIAVPSKKEETHQPEIIRWLDNLYEIIDEIPVQLNGISMKDDGNATSWMPVGEVTDDLNIYSNVLTEIQEDGWVENISLAVEQTKYVVSKIYGDLLSDVLEIRNSSNNDFRNNKLEQMYFLIDLPFKNWVSSINGESEKVQKLREWRSKMRTILEAEVYEFVKEAGPREYIGITAENKQSKKKEIKNIATIMNKFYYRLNKVLPKE
>NZ_CP013988.1|WP_082685380.1|731958_734700_+|CRISPR-associated-helicase/endonuclease-Cas3
MWLPLNIHLSDTKIVSGLLWEHWLSDHQRRFIADSLIGEFEDRKSVAKQLAEFLGATHDLGKAVPAFYRKPGWLLDVEFEKQLSEKLIRAGFMDSQRQEMTQESSKTPHQLASQTLLEMYGLNSDIGTIIGGHHGKPFDSKKQIKKNIKNFPYNYYLYEGKGDRFAQRWKNEQERLIAWALETTGFESLDKVPGIEQPAQVLLSGLLIMADWISSNEDYFPLIDFTDSGEGINSLERAFRGWDDWKSTDVISFEREVEVEQLFEKRFNFNTPRNVQKTFVDIIRKSENHGLYILEAPMGIGKTEAALAGIEELIRIKGMGGMFFGLPTQATSNGIFPRIESWLQVMLKDSNNHNEKTSIQLIHGKASLNDKFQKLKTTSNIYSDDEEVVTVNSWFSGKKTAILDDFVVGTVDQFLLLSLKKKHLALRHLAFSKKVVVIDEVHANDAYMNVYMKNALEWMGAYQIPVILLSATLPAKTRQQLIQHYISGQGFSLNETIKAENWDTSDAYPLITYTDGNRVNQETFDKDEVTNSVEIIQLADEDFEDKIAELVSNGGIVGIIVNTVRKAQELGEKLMNLYGQETVEILHSSFISTDRIQKEEKLLNIIGKGKERPQKKIIIGTQVIEVSLDIDFDVLISDLAPMDLLMQRIGRLHRHENVVRPKEHTIPRVYVLGTNEKFDFDTGSQAVYGQYLLIRTQYFLPEIVRLPYDISKLVQEVYGKDDLDLPDILYSSYKEAKCKQDVLLNKKEGKANAYRLNEPETGHGFHDHENLIGWLENVRPQDSDPNSTAQVRDGDETIEVIPVKKIENGYSMIGETEDISKRISESEIARNLAKQTLKIPAALTKRYNIQDTIEYLENTNNHLFPEWQQQPWLKGSLGLIFDSNGKCIINGLELHYSEYLGLKYTKEVSDGKV
>NZ_CP013988.1|WP_059348696.1|730360_731632_+|ClC-family-H(+)/Cl(-)-exchange-transporter
MHEGRLNYRLGLLSVVTGVIVGIVLSGFRLAIPAIMHVVEGVLVWGQTSIWHSIGFVLMFAVIGCIVAWTAKQEPMIGGSGIPQIAGKLSGKLNFSWASVLFYKLLGGLLAIGSGLTLGREGPSVQIGASIGQGVAELSKSSKASTKYLIVGAAGAGLATAFNAPVSGIIFCLEELLKKVTRRGFLSATLTIITASLVSIALIGDAAAITIPQALHVEMATYPYLIILGGLLGLSGVLFNKVILWSKAMYGRWQLASFWKMVFPFVLTALVLLMDVRLIGSGEELILLPFLDNPSVMTLVYLFISKIVLLGVAFGSGIPGGIFFPLLSLGALVGNIYASGLHVFGLVDAYTITVFTVIAMAAHFAAIVRAPLTGIFLILEMTGGSIQYLLPIAIVTYIAYFVAEIYQSEPIYESLLRLMVDEG
>NZ_CP013988.1|WP_059348695.1|729888_730248_+|50S-ribosomal-protein-L19
MSNLIDQITSEQLRNDVPDFRPGDTVRVHAKVVEGERERIQLFDGVVIQRRGAGISETYTVRKISNGVGVERTFPVHTPRVAKIEVLREGKVRRAKLFYLRDLHGKAARIPERRRNKQK
>NZ_CP013988.1|WP_059348704.1|744354_744678_+|hypothetical-protein
MASNKNLYNEVIYLNVVNEMIAYIESFLKKPVNRIAQLRNSIIQDYDGNWHNKTIKELAIHARKSLGIISTNKKLLMAIETSGIHALEKNRGQNVMPTVFGQMMKHQ
>NZ_CP013988.1|WP_159025931.1|744893_745247_+|hypothetical-protein
MTDKQHLNFRSQFESRNYQLGEPLDRVISFKRSGKIRHIFNLVLDNDLTDIHEIENHYNMKLALIENFFTEHQFFEQYIDKRYSDKSKNIIPLHSEQKCPSSLMWKSRYSGIFDGHI
>NZ_CP013988.1|WP_059348706.1|745274_746690_-|aldehyde-dehydrogenase-family-protein
MKKYNNFINGVWTAPTNNEYKEVENPTTEETFAQVAYSANEDVDQAVEAAKTAFPAWNNLSLEERTGYVEKLLAEIKAHKEEIRDIIVEEFGAAKTFSESGQVGLAIDEMSATVEAIKDYNLTQQIGNTKVIKEGYGVVAAITPWNYPLNQIQRKITPALLAGNTVVVKPASDTPLTAVKLFELAEKVGFPKGVFNLILGSGSGAGNYLAEHEDVAVVSFTGSTEVGQGLYENAAKGIKHIILELGGKSALVYLPGGDLSFAVKKAMGTILNNQGQTCTALTRLLVPKDELADVEAEVKSFYEENVVIGDPADPNTLVGPMVSANQKKTVLEYIEKGKAEGAKVLVGDKKPAIETGHFVTPTVFTNVTNDMTIAQEEIFGPVLVIITYDTEEEAIEIANDSIYGLSGAVVGPTEDAYKVAKQLRTGNIFVNKSERNPLAPFGGYKQSGLGRENGLYGVEDYLETKAIFLED
>NZ_CP013988.1|WP_059348707.1|746986_747991_+|Gfo/Idh/MocA-family-oxidoreductase
MKMGIAGTGKVVEQFLPVIAELPEIQVTAINSTPKSVDKAIAFQEQYGIDQVFSDYSQFLTEADIDTVYVAVINNLHFPFAKEALLHGKHVICEKPFTMSQRELIELERLSIDYDLVLAEAVTGQFVENYGKIRELLPLLGDIKLIECNFSKYSSKYDSFTAGNVLPAFDAKNGGGALMDLNSSNIHFVVGLIGRPDKVAYYPNIENSIDTSGVLIMDYGYTKAVCMASKDSTGKNGATIQGTKGTIKVNSATNRVTSFDIWTNDGYTDHFELNTYEHKMGAEFKIFANWIDHGDTMYAEEHLAQSLTVMEVLDMAIADSDLKEDPFWEPKLTF
>NZ_CP013988.1|WP_059348708.1|748097_749081_+|aldo/keto-reductase
MKTRNLGNSGLVVSEIGFGAMGMSMGYGVRPDRQDMIQVLRDVYEMGERFYDTAEIYGPYHNEELVGEALAPFKNDVTIASKVGIKMVDGKQVVDGNTAGIEKSIEGSLKRLQIDTLDLYYLHRVDPNIPIEEIAETMGKLKKAGKIRHWGLSEAGVNTIRKAHAVEPLAAVESEYSLWTREPEEELLPTLRELGIGFVLFSPLGKGFLTGKIKTLDDLNEADGRAGLPRFQKDALEANLLLVEIIEDMAKEKNATPAQIALAWLLAQGDYIVPIPGTTKANRAKENMGASDVAFTADELSRLTTAANMVQIVGNRYTPEMQARVGL
>NZ_CP013988.1|WP_059348709.1|749202_749604_+|MerR-family-transcriptional-regulator
MNIKKVSEITGVSADTIRYYEKIGLIHPIKRNENGVRVFDEEDLRWIHFARAMRTAGLSIESLTNYVSMFQEGDHTIEARKEILRDQIEDLTERIDVLQAAKDRLEFKLANYDTHLRLYETSLREGEQVEIQS
>NZ_CP013988.1|WP_026466307.1|749894_751205_+|PTS-sugar-transporter-subunit-IIC
MNNGFLEKFANTLGGFANTINNLRYIKVIKNAFAALLPVIITGAFGTLFSAMVFDSENGLAQISFLRFLENLKPISASISYVTLSFLTIYAVFLIGIELAKLNNIKGVFPGIVAVMSYLSVNPTFIEFMDGDNALIIENVLGKQYSDTKGLFLGMFIAILSIELYSWLDRQEKLTIKMPETVPSNVSASFSALIPTVLTVSIIAALGFAILSLTGMYAYDIVYTIVQQPLEGIIQGLPGLLVLMLIAQIFWVIGIHGNQMVKPIREPLLLGAIAVNTEAFNAGKELPNIITMPFWDMYMSIGGSGVTISLLIAIFIVTKRKDYLQIAKLSAAPGLFNINEPLIFGLPIMLNPILAIPFIITPLVTGTIGYFATAIGFAGKAVVMVPWPTPPIINAYIATAGSVGAVITQLICIVVAVLIYLPFVKVADKMVKTEEA
>NZ_CP013988.1|WP_059348710.1|751207_752605_+|glycoside-hydrolase-family-1-protein
MSRPIPKDFILGAATSAWQTEGWSGKKDGQDSYLDEWFKKENFVWHNGEGPDIATNFMVQYQEDIDIMQDIQLTHYRTSINWSRFFTDYEACTVDEDYANHIDQVIDGLVAAGVEPMICLEHYELPKFLSDKYDGWSSKKVVELYVKYAAIVFERYGDRVKNWFTFNEPIVVQTRVYLDALRWPHEQNSKKWMLWNFHKTLATAKVIKLFREKGYDGRVGCILNPEMVYPRSSSKEDQAAAHYYDLFYNRVFFDPMVLGTYSPEFMQLCIENDIYFDPTEEELALIKQYTVDFLGVNQYYPKRIKAQRFAWAEDQPFHPTKYYEEFDLPGRQMNKSRGWEIYPQIMYDMAMYLTENYPDLTWLVAENGMGQENEQQFKNADNIIQDDYRIEFISQHLSQLLRAVDDGARCEGYMLWAFTDCVSPMNAFKNRYGLVEIDLDDHRKRVKKKSADWYRTLITDRVLDI
>NZ_CP013988.1|WP_026466305.1|752648_752960_+|PTS-sugar-transporter-subunit-IIB
MGKLNIVLVCSAGMSTSLLVSKMKKAAEDSGVDVSIEAIASSVAVEQLADTPADVLLLGPQVRFLEKDYKNRFTDIKVDMISPMDYGTMNGEAVLSQALKLAN
>NZ_CP013988.1|WP_059348711.1|753132_755160_+|BglG-family-transcription-antiterminator
MRKNECDTIMENIEFVTTEIDIIKKLFQKKATYISSKELAAEIGVSDKTVRKYINHAKEALEQYGATIEMKKGSGYLLNIEDQHTFYSLLEEINSPQLSTAISSGPSDNIERERFILNLLLLENKQVTIHELAETMFISKSTVSAVIQQIKHKINAFNLTLNYDYQGNLLILGEELEKRRFILSYFYSNRSIESLNTTLFDYQFEGFSMETIFIIVLEKCREYQVQVSDFVLQNLVIHISLAIKRIESGFVINPKDEISSTDIEKELFVAEKIVASIEELIGIEFPENEAFYIAVHLKSKSNQLGEDTKFEDKELQIQLLEKLEQLNTVVDTPFLIDQQLLMGLKIHFEPLMTRLKNHIALSNPLTEEVVTKFPKLFAKSKQVLATMPILKHYEVSDHEWSYILLHILAAVERYKLASKLKVIVICATGLGSAQMLKNRLENEFSNSLSIESVISYYQLNGEMLKDIDLIISTIDISTTFYSVPVVNVSVFLNKEDIDLINKYVGRDRSSQVKKNKLHINQRKSQDIFNQYFSTDRFIQFEPGTSRDEMMQQLIATLSDSSTSVFVGELEKQIQIREQFSSLAFSQLAAFPHPAQPVGISSEIAIGLLPSDLYWDADHPKIKIVFLMSHSRIENPGLEMINEGLAAFIHQEDLMYQLILQPSFEQFKTLFMHVLG

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013988_1	1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder	362540-362569	30	NZ_CP013988.1	1566883-1566912	0	1.0

1. spacer 1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder matches to position: 1566883-1566912, mismatch: 0, identity: 1.0

tagaatgacgggcttcctcctcagcttgct	CRISPR spacer
tagaatgacgggcttcctcctcagcttgct	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013988_2	2.33|743217|33|NZ_CP013988|CRISPRCasFinder,CRT	743217-743249	33	MK922546	Staphylococcus phage SA1-CTA1, complete genome	14715-14747	2	0.939
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	KJ419279	Enterobacteria phage 9g, complete genome	53959-53991	4	0.879
NZ_CP013988_2	2.29|742973|33|NZ_CP013988|CRISPRCasFinder,CRT	742973-743005	33	MF001367	Staphylococcus phage SA4, partial genome	2855-2887	6	0.818
NZ_CP013988_1	1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder	362540-362569	30	GU943054	Uncultured phage MedDCM-OCT-S04-C24 genomic sequence	13216-13245	7	0.767
NZ_CP013988_1	1.2|362606|30|NZ_CP013988|PILER-CR,CRISPRCasFinder	362606-362635	30	NZ_CP048287	Paenibacillus sp. 14171R-81 plasmid unnamed1, complete sequence	103934-103963	7	0.767
NZ_CP013988_2	2.31|743095|33|NZ_CP013988|CRISPRCasFinder,CRT	743095-743127	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	854290-854322	7	0.788
NZ_CP013988_2	2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT	741326-741358	33	MT757399	Enterococcus phage AE4_17, complete genome	16901-16933	8	0.758
NZ_CP013988_2	2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT	741326-741358	33	MT747434	Enterococcus phage ZEF1, complete genome	16896-16928	8	0.758
NZ_CP013988_2	2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT	741326-741358	33	NC_049935	Enterococcus phage vB_EfaP_Efmus4, complete genome	16579-16611	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013952	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S35-C87, *** SEQUENCING IN PROGRESS ***	22697-22729	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013953	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S43-C147, *** SEQUENCING IN PROGRESS ***	10930-10962	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013950	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S28-C83, *** SEQUENCING IN PROGRESS ***	7277-7309	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013955	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S45-C83, *** SEQUENCING IN PROGRESS ***	7277-7309	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013951	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S30-C111, *** SEQUENCING IN PROGRESS ***	7277-7309	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	GU943075	Uncultured phage MedDCM-OCT-S09-C14 genomic sequence	13455-13487	8	0.758
NZ_CP013988_2	2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT	742241-742273	33	AP013954	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S44-C120, *** SEQUENCING IN PROGRESS ***	7277-7309	8	0.758
NZ_CP013988_2	2.29|742973|33|NZ_CP013988|CRISPRCasFinder,CRT	742973-743005	33	MN693070	Marine virus AFVG_25M391, complete genome	553-585	8	0.758
NZ_CP013988_2	2.33|743217|33|NZ_CP013988|CRISPRCasFinder,CRT	743217-743249	33	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	123608-123640	8	0.758
NZ_CP013988_2	2.40|743645|33|NZ_CP013988|CRISPRCasFinder,CRT	743645-743677	33	MN445183	Salmonella phage vB_SalM_SA002, complete genome	13296-13328	8	0.758
NZ_CP013988_1	1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder	362540-362569	30	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	83451-83480	9	0.7
NZ_CP013988_2	2.1|741265|33|NZ_CP013988|CRISPRCasFinder,CRT	741265-741297	33	CP033541	Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-1, complete sequence	88485-88517	9	0.727
NZ_CP013988_2	2.1|741265|33|NZ_CP013988|CRISPRCasFinder,CRT	741265-741297	33	MN693138	Marine virus AFVG_25M145, complete genome	15249-15281	9	0.727
NZ_CP013988_2	2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT	741326-741358	33	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	24563-24595	9	0.727
NZ_CP013988_2	2.11|741875|33|NZ_CP013988|CRISPRCasFinder,CRT	741875-741907	33	NZ_CP012031	Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp1, complete sequence	64460-64492	9	0.727
NZ_CP013988_2	2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT	743339-743371	33	AC171169	Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE	79426-79458	9	0.727
NZ_CP013988_2	2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT	743339-743371	33	NC_042307	Escherichia virus H8, complete genome, *** SEQUENCING IN PROGRESS ***	79426-79458	9	0.727
NZ_CP013988_2	2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT	743339-743371	33	MN316588	Escherichia virus VEc33, complete genome	90600-90632	9	0.727
NZ_CP013988_2	2.40|743645|33|NZ_CP013988|CRISPRCasFinder,CRT	743645-743677	33	NZ_CP028971	Aminobacter sp. MSH1 plasmid pUSP3, complete sequence	60830-60862	9	0.727
NZ_CP013988_2	2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT	741326-741358	33	MN693390	Marine virus AFVG_25M491, complete genome	10624-10656	10	0.697
NZ_CP013988_2	2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT	743339-743371	33	NC_047835	Escherichia phage OSYSP, complete genome	63201-63233	10	0.697
NZ_CP013988_2	2.41|743706|33|NZ_CP013988|CRISPRCasFinder,CRT	743706-743738	33	AP018715	Enterococcus phage phiM1EF22 DNA, complete sequence	35954-35986	10	0.697
NZ_CP013988_2	2.41|743706|33|NZ_CP013988|CRISPRCasFinder,CRT	743706-743738	33	MK693030	Enterococcus phage vB_EfaM_Ef2.1, complete genome	71658-71690	10	0.697
NZ_CP013988_2	2.42|743767|32|NZ_CP013988|CRT	743767-743798	32	MH107246	Synechococcus phage S-B64, complete genome	85399-85430	10	0.688
NZ_CP013988_2	2.42|743767|32|NZ_CP013988|CRT	743767-743798	32	KY945241	Synechococcus phage S-H35, complete genome	89714-89745	10	0.688

1. spacer 2.33|743217|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MK922546 (Staphylococcus phage SA1-CTA1, complete genome) position: , mismatch: 2, identity: 0.939

tgatttaccgtccgaacggttcgaaatagatat	CRISPR spacer
tgatttaccgtctgaacggtttgaaatagatat	Protospacer
************.********.***********

2. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to KJ419279 (Enterobacteria phage 9g, complete genome) position: , mismatch: 4, identity: 0.879

tattgataacgttgatttaagtga-attgttaaa	CRISPR spacer
tattgataacgttggtttacgtgagactgttaa-	Protospacer
**************.**** **** *.****** 

3. spacer 2.29|742973|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MF001367 (Staphylococcus phage SA4, partial genome) position: , mismatch: 6, identity: 0.818

tttgacggtatcaatttttatgactatttaaaa	CRISPR spacer
ttccatgatatgaatttttatgactatataaaa	Protospacer
**. *.*.*** *************** *****

4. spacer 1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder matches to GU943054 (Uncultured phage MedDCM-OCT-S04-C24 genomic sequence) position: , mismatch: 7, identity: 0.767

tagaatgacgggcttcctcctcagcttgct	CRISPR spacer
taagccgaagggcttccttctcagcttgcg	Protospacer
**.. .** *********.********** 

5. spacer 1.2|362606|30|NZ_CP013988|PILER-CR,CRISPRCasFinder matches to NZ_CP048287 (Paenibacillus sp. 14171R-81 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

atgtagtgaattccatttgtaatgcgttgt	CRISPR spacer
atgtcgtgaattccttttgtaattccggga	Protospacer
**** ********* ******** *   * 

6. spacer 2.31|743095|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

tgcgacggtcccagaagcggaagcagtcacagc	CRISPR spacer
cagggcggtcccagaagcggaagccgtcaatgc	Protospacer
.. *.******************* ****  **

7. spacer 2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MT757399 (Enterococcus phage AE4_17, complete genome) position: , mismatch: 8, identity: 0.758

cgaccaatagcaccacctgaagccaatgctgtt	CRISPR spacer
cgaccaatagtaccacctgaagccttattagct	Protospacer
**********.*************    . *.*

8. spacer 2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MT747434 (Enterococcus phage ZEF1, complete genome) position: , mismatch: 8, identity: 0.758

cgaccaatagcaccacctgaagccaatgctgtt	CRISPR spacer
cgaccaatagtaccacctgaagccttattagct	Protospacer
**********.*************    . *.*

9. spacer 2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NC_049935 (Enterococcus phage vB_EfaP_Efmus4, complete genome) position: , mismatch: 8, identity: 0.758

cgaccaatagcaccacctgaagccaatgctgtt	CRISPR spacer
cgaccaatagtaccacctgaagccttattagct	Protospacer
**********.*************    . *.*

10. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013952 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S35-C87, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

11. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013953 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S43-C147, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

12. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013950 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S28-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

13. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013955 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S45-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

14. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013951 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S30-C111, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

15. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to GU943075 (Uncultured phage MedDCM-OCT-S09-C14 genomic sequence) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

16. spacer 2.17|742241|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP013954 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C5E-MedDCM-OCT-S44-C120, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tattgataacgttgatttaagtgaattgttaaa--	CRISPR spacer
tattgatgacgtcgatttaagtga--cattcagtc	Protospacer
*******.****.***********  ..** *.  

17. spacer 2.29|742973|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MN693070 (Marine virus AFVG_25M391, complete genome) position: , mismatch: 8, identity: 0.758

tttgacggtatcaatttttatgactatttaaaa	CRISPR spacer
gctgatggtataaatttttatgactataataag	Protospacer
 .***.***** ***************   **.

18. spacer 2.33|743217|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 8, identity: 0.758

tgatttaccgtccgaacggttcgaaatagatat	CRISPR spacer
agaacaaccgtgcgaacgcttcgaaatagaaag	Protospacer
 ** . ***** ****** *********** * 

19. spacer 2.40|743645|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MN445183 (Salmonella phage vB_SalM_SA002, complete genome) position: , mismatch: 8, identity: 0.758

caaacgatacggtttacaacttgaagcgatata	CRISPR spacer
caaacgttacggtttagaacttgacgtctcgta	Protospacer
****** ********* ******* *.  ..**

20. spacer 1.1|362540|30|NZ_CP013988|PILER-CR,CRISPRCasFinder matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 9, identity: 0.7

tagaatgacgggcttcctcctcagcttgct	CRISPR spacer
gctcgtgacgggctttctcctcagctatgt	Protospacer
    .**********.**********   *

21. spacer 2.1|741265|33|NZ_CP013988|CRISPRCasFinder,CRT matches to CP033541 (Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-1, complete sequence) position: , mismatch: 9, identity: 0.727

tgctttatgattttgtaaatcttcaatcaacat	CRISPR spacer
tgacggctgtttttctaaatcttcaatcaactc	Protospacer
** .   ** **** **************** .

22. spacer 2.1|741265|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MN693138 (Marine virus AFVG_25M145, complete genome) position: , mismatch: 9, identity: 0.727

tgctttatgattttgtaaatcttcaatcaacat	CRISPR spacer
taaaggattattttgtaaatcctcaatcaatct	Protospacer
*.    ** ************.********. *

23. spacer 2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 9, identity: 0.727

cgaccaatagcaccacctgaagccaatgctgtt	CRISPR spacer
accgcaatagcaccacctgaaaccattgaggtc	Protospacer
    *****************.*** **  **.

24. spacer 2.11|741875|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NZ_CP012031 (Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp1, complete sequence) position: , mismatch: 9, identity: 0.727

tatacagtgtttgacctactgaaatcttatcct	CRISPR spacer
aggactcgttttgaccttctaaaatcttatcct	Protospacer
 . **    ******** **.************

25. spacer 2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AC171169 (Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE) position: , mismatch: 9, identity: 0.727

caacacaaatgaatttgcattacaaattgatac	CRISPR spacer
cggcacaaatgaattagcattaccaataccttg	Protospacer
*..************ ******* ***   *  

26. spacer 2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NC_042307 (Escherichia virus H8, complete genome, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.727

caacacaaatgaatttgcattacaaattgatac	CRISPR spacer
cggcacaaatgaattagcattaccaataccttg	Protospacer
*..************ ******* ***   *  

27. spacer 2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MN316588 (Escherichia virus VEc33, complete genome) position: , mismatch: 9, identity: 0.727

caacacaaatgaatttgcattacaaattgatac	CRISPR spacer
cggcacaaatgaattagcattaccaataccttg	Protospacer
*..************ ******* ***   *  

28. spacer 2.40|743645|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NZ_CP028971 (Aminobacter sp. MSH1 plasmid pUSP3, complete sequence) position: , mismatch: 9, identity: 0.727

caaacgatacggtttacaacttgaagcgatata	CRISPR spacer
gcggcgatacggtctacaacttgcagcgtcatg	Protospacer
  ..*********.********* **** .**.

29. spacer 2.2|741326|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MN693390 (Marine virus AFVG_25M491, complete genome) position: , mismatch: 10, identity: 0.697

cgaccaatagcaccacctgaagccaatgctgtt	CRISPR spacer
tggtttatggcaccacctcaagccaatgcttaa	Protospacer
.*... **.********* ***********   

30. spacer 2.35|743339|33|NZ_CP013988|CRISPRCasFinder,CRT matches to NC_047835 (Escherichia phage OSYSP, complete genome) position: , mismatch: 10, identity: 0.697

caacacaaatgaatttgcattacaaattgatac	CRISPR spacer
aggcacaaatgaattagcattaccaataccttg	Protospacer
 ..************ ******* ***   *  

31. spacer 2.41|743706|33|NZ_CP013988|CRISPRCasFinder,CRT matches to AP018715 (Enterococcus phage phiM1EF22 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

taagttaggtgatacttttgtttcgtaagttac	CRISPR spacer
accaacacctgctacttttgttgcgtaagttac	Protospacer
   . .*  ** ********** **********

32. spacer 2.41|743706|33|NZ_CP013988|CRISPRCasFinder,CRT matches to MK693030 (Enterococcus phage vB_EfaM_Ef2.1, complete genome) position: , mismatch: 10, identity: 0.697

taagttaggtgatacttttgtttcgtaagttac	CRISPR spacer
accaacacctgctacttttgttgcgtaagttac	Protospacer
   . .*  ** ********** **********

33. spacer 2.42|743767|32|NZ_CP013988|CRT matches to MH107246 (Synechococcus phage S-B64, complete genome) position: , mismatch: 10, identity: 0.688

tagccaccgataccaattgcaatgtttgctac	CRISPR spacer
gtgcctccgatatcaattgcaatgtcgtcaga	Protospacer
  *** ******.************.  * . 

34. spacer 2.42|743767|32|NZ_CP013988|CRT matches to KY945241 (Synechococcus phage S-H35, complete genome) position: , mismatch: 10, identity: 0.688

tagccaccgataccaattgcaatgtttgctac	CRISPR spacer
gtgcctccgatatcaattgcaatgtcgtcaga	Protospacer
  *** ******.************.  * . 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	284448 : 296023	11	Streptococcus_phage(50.0%)	NA	NA
DBSCAN-SWA_2	765445 : 774174	8	Tetraselmis_virus(16.67%)	NA	NA
DBSCAN-SWA_3	1039579 : 1049059	10	Tupanvirus(16.67%)	NA	NA
DBSCAN-SWA_4	1743482 : 1749613	8	Staphylococcus_phage(66.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP013988|284448:296023|DBSCAN-SWA
TTTGGCAGAAGAAATTCAAAAATTTGATGTAGTTGTGGTTGGTGCAGGACCAGCGGGTATGACTGCTGCCTTATACGCATCACGGGCTAACTTGTCCGTAGCATTATTAGAACGTGGAATCCCTGGGGGCGAGTTGGTCAATACAGCGGATGTCGAAAATTACCCTGGTTTCAAAAACATTCAAGGACCAGACTTGGCCAATGAAATGTACGAAGGGGCTATGCAATTTGGTGTGGTCCACGAATTTGGGACGGTCACTAAAGTAACGCCGAATGAAGGGGCTCATTTACTGGAAACAGATATGGGTAAAACTTACCAAGCTAAAGCGATCATTATCGCAACTGGTTCTGTTCACCGTAAATTGGGTGTGCCGGGTGAAGATAAATATTCAGGCCGCGGTGTTTCTTACTGTGCGGTTTGTGACGGGGCTTTCTTCCGTGATAAAGACCTTCGTGTAATCGGTGGAGGTGACTCAGCTGTTGAAGAAGGGACTTACTTAACGCAATTTGGTAAAAACGTGAATATCGTTCACCGTCGTGACGAATTACGAGCTCAAAAAATCTTACAAGACCGTGCTATGTCTAACGATAAGGTTGATTTCACCTGGGATACAGTTGTCAAAGAAATCAAAGGAGACGACATGAAAGTCACTGGTTTAGCCGTTGAAAACGTTAAAACTGGTGAAATCACTGACGTGGATACAGATGGTGTCTTCATTTATGTTGGTTTGATTCCAAATACCGAAGCATTTGCTGATTTAAACATCACAGATGAAGAAGGTTGGGTGATCACAAATGAAGATATGCAAACAAATATTCCTGGTATCTTCGCCATTGGTGATGTTCGTCAAAAGAAATTGCGCCAAATTTCAACAGCAGTCGGTGACGGTGCCATTGGTGGCCAAGAAGCCTTCAATTACATTGAAACCCTAAACGACTAGTTCTAAACATCATATAAAAAACAGTTAAAGCAAGGTGAATGTGCGTTAACTTGAAGGGGGTAGGCTTTGGTCTATCTCCTTTTTGATTGAAAAAGGACGAATCTTCATTTAAGCTGGCACCCTATATGAAATTGCCAATCAGCTTGTCTTTGATATATCTTTTTTTATAAAATTTGATACAATAAGGTTAAGATGTTATCGCTTTTAAAACTAGGGAGGCTACATGATGAACTGGAAAGAAACTTACTTACAATGGCGTAATTTTGAAGACTTAGACGGTGCTTTGAAAGAGGATTTAGCGTCTATTGAAGCTGACGAAAAATTGCTTGAGGATGCTTTTTATCAACCATTGAGTTTTGGTACAGCTGGTATGCGCGGGATTTTAGGTGCCGGCATTAACCGGATGAATATTTATACCATTCGTCAAGCGACTGAAGGATTGGCTAACTTACTAGAAGATTATGGCCAGGATGCGAAGGACCGAGGGGTGGCGATTGCTTACGATTCTCGTCATATGTCGCCTGAATTTGCTATGGAATCGGCGAAGACTTTAGGGGCACACGGGATTAAATCTTACGTATTCGAAGCATTACGCCCAACGCCTGAATTGTCATTTGCAGTTCGTGAATTAAATGCCTTTGCGGGGATTATGATCACAGCTTCTCACAACCCGGCTGACTACAACGGCTACAAGGTTTATGGGGAAGATGGTGGACAAATGCCACCAGTGGACGCGGATGCTGTAACGGCCAACGTACGTGCGGTTGAAAACCCATTAACTGTTGAAGTGGGCGATGAAGCAGCGCTTAAGGCTGACGGCACAATTACGATTATTGGTGAAGAAATTGACCAAAAATACTTAGACAATATGAAGGCTGTTGTGGTGGACCAAGCTGTGATTGATGAGATGGCTGACCAAGTATCTATTGTTTATACACCCCTACATGGTACGGGTCAAATGTTGGTGGAACGGACTTTAGCTGACGCTGGGTTTACCAATGTCACCTATGTGGCTGAGCAAAAAGAGCCGGATGCTGATTTTTCAACGGTTAAATCACCAAACCCTGAAGAAGCGGGTGCCTTTGAAGTGGCTGAAAAGTACGGTAAGGACAATGACGCCGATATCTTAATCGCGACTGACCCGGATGCTGACCGTATGGGTGCAGCTGTAAAATTGCCAAATGGTGACTACCAAGTGATTACTGGTAACCAAATTGCCGCATTAATGACGCATTATATTTTAACCGCTAAGAAAAATACAGGTACATTACCTGATAACGGTGTGATTTTAAAATCCATCGTATCAAGTGAAATGCCAACAACGATTGCCAAATCATTTGGCGTTGAAACAGTTGACGTATTAACTGGATTCAAATTTATTGCGGAAAAGATCAAAAACTATGAAGCTGATGCTAGCAAGACTTTCCTATTCGGTTTCGAAGAAAGTTACGGATATTTAGTGAAAGCCTTCGTTCGTGATAAAGACGCCGTTCAAGCGACTTTATTATTAGCTGAAGTAGCCGCTTTCTACAAGAAACAAGGTAAAACAGCTTATGACGGCTTACAAGACTTGTTTGCTGAATACGGCACCTACCAAGAAAAAACAATCTCTGTAAGCTTACCAGGCCAAGAGGGTGCAACGAAAATCGAAGCCATCCTAAATAATTTGCGTGGGGAAGGTTTAAGTGAAATCGCTGGTCAAGCAGTTGTTGAAACTGAGGACTACCTACAAGATACGCGCCAATTTGCTGACGGTACTACTGAAGCATTAGGCATGGACAAATCAAATGTATTGAAATACTATCTAGCAGATGAAACATGGATTGCCGTTAGACCATCAGGTACAGAACCAAAAATCAAGTTCTATATTGGTGTGGTCGCTGATTCACTAGAAGCAACACAAGCAAAAATTAAGGCATATGAGGCAGCCTTAAACGACTTAACGGCTTAAGTGTATGCTGTCTGGCAGCTTTATCGATAAAAGGGCAACCTTTCATCTCCCTTTTAAGGAGGAAAAAACAAATTGAATGATCAATTAAAATTAGTCATTATCACAGGTATGAGCGGTGCCGGTAAAACGGTCGCTCTACAAAGTTTTGAAGATATGGGTTACTACTGCGTGGATAATATGCCGCCGTCGCTATTACCTAAATTCTGGGATTTAATCAAAGAAACGGGGAAAATCAGTAAAATCTGTTTAGTGATTGATTTACGTTCACGTTCATTCTTTGATGAGTTATTAACAGAGATTAATGGTATGGACAACACAAACACCATTGAAATGTCCGTATTATTCCTAGAAGCGGATGATCAGACTTTAGTGGCGCGTTATAAAGAAACACGCCGTGCCCACCCACTTCAAAAAGATGGGGTTTCTGTCTTAGAAGCGATTCAAAAAGAAAAAATCTTATTAAATGATATTCGTAAGGAATCTTCAGTGATAGATACGACAAACTTAACACCGCGTAAATTCCGCGAGTTATTGTTGACCGAATTCCAATCTGAAGATGAGGGTACCTTCACTGTTAACGTCATGTCATTTGGTTTCAAATATGGTTTACCAATTGATTCAGATATCGTGATGGACGTCCGTTTCTTACCAAATCCGCATTATATCGATGAATTACGCCCGATGACAGGGCTAGATGCACCAGTTTATGACTATGTCATGTCTCAGCCAGAAACTGAGACTTTCTACCGTAAATTCACTGATTTATTAGATTTTGAATTACCTTTATATGAAAAAGAAGGGAAGTCTAGTCTGACGATCACTATCGGTTGTACAGGCGGTCAACACCGGTCAATTGCCTTGACTGAACGTGTTGCCCACCATATCCAAGACCTAGGTTACAAGGTCAACATCATCCACCGTGATCGCACAAAAAGAAAAGAGTCGATGAACCTATCGTGATTAATAAAAATCCACGTCCGGGTAGACGGCCAAAGGTTGCGGTCATCGGAGGCGGAACGGGCCTTCCTATCTTGTTGGAAGGTCTAAAGAATGCTGATTGTAATGTGACAGCCATCGTCACAGTGGCTGATGATGGTGGGTCGAGTGGATCTTTACGTAATGCAGTCAGTACAATTCCTCCAGGAGATATCCGTAACTGCCTAGTTGCGCTATCGGACATGAAGAAAATATATAAAGATGTATTCCAATACCGTTTTAGTGAAGAAGATAAAGAATTTTCTGGTCACGCGATTGGGAATTTAATCATTGCAGCCATTGCTGAGATGCGGGGCGATACCTTTGCCGCTTTGCGTCTACTTTCTTATATGATGGAAGTGGATGGCAAGGTCTTGCCAGCTTGTGAGGAAGCGCTTGTTTTACAAGGACATTTTGCAGATGGGACTATGATTGAAGGGGAAACGGCTGTTGTAGCCCACCCTGACCAAATTCAAGAAGTGACTGTTCGCTTGGCTAATGACCGACCGAAAGTGGATGTGTCGGGTAACCCAATCACCAGTCCGCGTGCTGGACGTGAAGTGGTGTCAGAAATAATGAAGGCCGATATGGTCATTCTGGGCCCAGGTTCTTTATACACGTCTATTTTGCCAAATGTGGCAATTGAGGAAATTCGAAACGCAATTGTTGACACGCCCGCCAAAGTTGTCTATATTTGTAATATCATGACACAACTTGGCGAGACTGAGCATTTCTCAGATGCAGACCATGTACGTGTAATTAACGAACACTTAGGGGCTAAGGCGATAGACACGGTGCTATTGAATAAAACTCCAGTACCCTTTGAATACTTGGAGGGTGCCAGTGAAAAGGACTATTTAGTTCAAATCACACAAGATCGTCAAGGCTTGGCAGATCAAAAATGTCAGGTGGTTGGCTGTGACTTTTTAAATCTTGAAAAGAGTGGGGTTTACCACAACCAGGATAAATTAGTCGGCGCTATTATGGATGTCATGAACGATCGCATAAAATAAAGTGAATAAGAAAGAGGTGAGCTGGTGGCTTCATTTGCAGGAGATGTAAAGAAAGAACTCACTCAGCTAACAGTGGACTATGAGCACGCGCGTTCAGAGCTAGCAGCCATTCTACGTATGAACGGATCGATTTCCCTTATGAATGGGCAATTAATCTTAAATGTACAGACAGAAAATGCTGCAATTGCCCGACGAATCTACTCACTGTTGAAGGAATTTTTTCATACCCATGGTGAGTTGGTTGTTCGGAAGAAAATGAAATTAAAGAAGAATAATATCTATATCGTGCGGGTGAAAGACCGGGTTGAGGAAATCTTGAAGGATTTGGAAATTCTAGATACTTTGGTCATCAATCCAAATATTTCAGCCGAAATGATGGAGAATGAACAGCGGAGTAGGTCATATTTGCGTGGAGCGTTCTTGGCTGGTGGGTCAGTGAATAATCCTGAAAAATCAGCTTATCATTTAGAAATCTATTCAGTGTATGAAGAGCATTGCGAAGACTTGGTGACTATGATGAACAAGTTTAATTTAAATGCGCGGTCAGTGGAACGTCGGTCTGGTTATATCGCTTATTTAAAAGGGTCAGAACAGATTGCTGACTTCTTAGCCCTAATTGGGGCCACTTCTTCTATGCTGAGGTTTGAAGATATCCGAATTGTTCGCGACATGCGTAATTCAGTCAACCGGATTGTCAACTGTGAGAATGCCAACTTAAATAAGACAGTGACAGCAGCTTCCAAGCAGGTTGAAAATATCGAATTGATTCAAGCAACCGTAGGGATTGGTGAATTACCTGAAAAATTACAAGAGATTGCCTTACTGCGGTTGGAAAACCCAGAGGCATCTATTAAAGAATTAGGGGAACTGGTTGACGGTGAACCGATTTCTAAATCAGGTGTCAACCACCGACTACGTAAGATTAACCAATACGCTGAGCAATTAAGAAATACAGCAATTACACAGTAGGATAAATTTAGAAGAATAGATATAGAATGAAGCGATTTGACGGTGGGTGACTGCTTGAAAATCGCTTTTTTAATTGCAATTTTCGTGGATATAATCATTTGGTTATAGCAGGCGCCAAAATTCAGTATTGGTCATTTTTTCTTTGTATTACATAATATAGGATGATCATTCAGCCAGATGATTGTTCAGTAAAAACGCCTTAAAAAATTCACGATAAAAGCCTTGTGGATGAAGATTTTCTTCAGTCACAAGACCTTTTCTATAGCTGATGCATGTGCAGGTGACCAGCTGGTATTAGGTTTGGTTTAGTGAATAATTAGGTGACGGTAGGCTAGTCATTTAATGATGGTATGTTTAATCACTAGATGTTGGTGTAGCTAATATTATTATTAGCTGATGGCTAGGGCTAAGGCGACAAGGGCAGACCCAGTTCTCACATGGTTCCACCTAGACCATTGTTGGACAAAGTCAGTCCAATCGGTTCGGATTTTCCGGTTAGCTAGTTGGCGGTTTAGTGGCATATTGAAGGCGATAGTTACGCCGATGACACCGACAAAATAAATCACAAAGCTCAGATATATTTGCCAGTCAATGGGGTTGCCCAGCAAAATAATCGCAATGAATAAAAATATCGGTGCGAAAAAACTGCCTAGAAATTGGTCGTTTTCAACCTGCTTATTGATGTCCTGCATAATCCTTTGGCCAACGTTACCGGCTTGTTTACCAAGAACTGGCATGATGGTGTTGGAGAAAGAAAAATAGAAGCCTAGTTGGATGGCTAGGCAAAGGACATAGACAACCTGAAAAATAGACATACTTGCTTCCCCCTAACCAGAATGTGTTCTACAATAGTTTCACTAATAGCTTTTATTAAACGTCTGAATTCAAGTCTATATAAAAGTTTTTCTTTAAGTCTATTGTACTGGAACATTTTTCTACTGGAAAGTGTGGGATCTACCTAAATCAGGATGGGTCTCATTTAGGACGAATTAATCAAGTTTTGTATCTTCTTTAATCTAAAATCAGGGTTTCAATATTGGCCATTAATTGTTCATCTGGATTTTGTGGTTGATCAATGCCAATTTTCTTGCGAAGGAAAGTCACTTCAGACACTTGTACCTCAATTGTTGATACATTTTGCCCTTGTTTATTTTCAAACTGACGCATACGCAATTGACCAACAACCGCTAATTCGTCGCCTTTTTGCATGTAGGTATCAATGAGTTTAGCCGTCCCATTCCAAGCGGTAATTGGAATAAAGTCGACGTAGTCAGTCCCATCTTTTCCTTTGCGGTTAATGGCTACTGCATTGTTGACCACTTGGCGGTTATTTGAAATTTCAGTTAGGGCGACTTCTCTGGCTAGACGTCCGATTAATTGCACTTGATTCATTTTTCATCCTCCTAAGGTTTCTGACTCAATAGAGGTTACCCCTCCAATCTATTACATACGTATTTATTCGCCAATTCCCCCAAAAAAGTTCATATTTTTTTGATATTTTATAAAATTAAACCAAAAGATAGGTAAAGATAGCCGGTCGTTAGGTATTTTAGGGTACAATATAGGAGAATAGAGATTCTGCCCTAAACCACCCAATAGTAGCGCCGGACTAAATATTAAAGGAATAATTTGACTTATAAGGAGGACGAAAACATGAACATCTTGATGATTGAAGATAACGAAAGTGTTGCAGAGATGATGAGTATGTTTTTTGAACAACAAAAAGACTGGGAAGCGACCTTTATCCAAGATGGTGAAGAGGGCTGGCAACACTATTTAGCTAACGAGGAAACGATTGAAATGGTGATTTTGGATTTAAACTTACCAAGTAAAGATGGGATTCAAATCTGTCGGGACATCCGCCAACAAAATAAACAAGTACCAATTATCATGCTGACTGCTCGTGACGCAGAAAGTGAACAAGTCCTTGGTTTAGGCCTTGGTGCAGATGATTACGTGACCAAACCCTTTGACCCAATCACCTTTATGGCCCGGATGCGTGCATTATACCGCCGTAGCCAATTGTCTGAATCATCAGTTGAAGCCACAGAGGAAAAGGGCAATGCGGACCAATTTGACATCCAAACAGAATTTATCCGGATCAACAGCCAAAACCGTGAAGCCTTCTATAAAGACCAATTAATTCAACATTTAACACCAAAAGAATTTGAAATTCTACAATTGTTGGCTCGTCGACCAAAACAAGTATTCACACGGGAACACTTACTGACAACGCTATGGGAAGACCCATTCTACGGGGATGAGCGTACAGTAGATGCCCACATTAAAAAGCTACGTCAAAAAATGGAAGAGTATGGGCCTCAACTTATTCAAACAGTCTGGGGAGTAGGCTATAAATTCGACGAAACCGGTGTTTAACAATGAAATTGAACTTTTTTTACCAACAAATTCTCAGCTTTCTAGTGGTCATTGGTATGACCATAGCAGCCATGGGGGTAACTTTGTTTTCTTTTTCAAGGGACCAGGTGCTCCTAAGGCAAGAACAACAATTGAATGACATTGCCCACTTTATTTCAGGGCAGACCATTTCACCCGAATTCTTAGCTTCAATGGAACCCTTACTGCAGTCGTCCAATATGAAGTTGTTCTATTTTAATGCGGACAACGAATTGATTTATCCAACCGATGAAGCAGTGGCCATTCCAAATAATCAGTTGACGGATGAAGAATTGAAGACGTTAGAAAATGGTCATGACTTGAATTTACGGACTTTTGAAATGGGCTTTACGGAAAAAGTCGGAGATGCCTTAGCCATCTTCATGCCGCTAACCAATGCAGAAAACCAGTCCTTTGCGGGTTACTTAGTTATTGGGGTGCCGTCTAGTCAATCCGATGCCATTATTGATAACCTGGTGCACAATGTGGTTAAAGGGATCATGATTGCCTTGATTATTGCGGTCATCTTTTCAGTGATTATTGCCGGATACCAAAATAAACGGATTCGCCGAATCCAGGAGGCCACCCAAAAAATTGCGCAAGGTGACTATTCGGTTCGTTTAGAGGTCAGTAATATTGATGAATTTGATGATTTAGCTAAGGACTTTAACCAAATGGCGGTTGCCTTAAGGGAGTCTGAAGTGGAAATCGACCGACAAGAAAACATCCGCCGTCAATTGATGATGGATGTGGCCCATGAAATTCGGACCCCGCTAACGACTATGATTGGTTTATTAGAAGGATTAAGACAAAAAGTATTGCCTGAAGATAAAATTGACCGGTCTGTGGATTTGATGTATAAGGAAGCCAACCGATTAAATCGGTTAGTTAACGAAAATCTGGATATTGAAAAAATACGATCCAATGAAATTGTATTGAAGAAATCAAAATTCAATGCAGCCGAAGTTTTAAGGGATATTTCGCTCCAATTATCAGAAACAGCCAAAGTTAAACACATCAAATTTGAATTGGATATGCCAGATGAAGTGCCGATTTATGCTGATTATGACCGATTCCACCAAATTATCTTCAATATCACCCAAAATGCGGTACAATTTACCGATTATGGCGAAATTTTTATGTCTAGCGCCTTTCAAGATGGGGAAACTTATATTAAAATAAAAGATTCAGGTATGGGCATGACGAAAGAACAAGTCGAAAATATCTGGGAGCGATTCTATAAAGCAGATATTTCCCGGAAAAATAATGAATTCGGTGAATCTGGTTTAGGTTTATCGATTGTTAAACAACTCGTTGAATTACATCAAGCCACTATCCACGTGGAGAGTGAAGCAGGCGTTGGGACAATATTTACCCTAGTATTTTATGACCGTGAAACATTGGCAGAAAAAAATAAGGTCGAATAGCTTTTAAGCAATCGACTGGTAACAAAAGGATTGAAACAAGATGTATTTTTTAGGGCCGTTACTTATATGGCTAGAAGACATTTCTGCAGGTAGAATTTTAAATTTCCATTTAGTAGAGTTATCGTTGTTTAGTTTGGATAAAACCATCTTCTATATGATTGCTTTACTGGTTATTCAAGCAGGAATCATTTTCTATAAACGGTCTAAGAATACAAATTATTCGATTGACTGGTTTAGAGAAGCAATCAAATTTATCTTTGCCATATATTTAATATTGTTGGTACATTTAACCGTATTACGTTATGATTGGCAATGGTGGCAAGCGTCCTTCAACTTTGAACGGTCGCTGAGTGAATTAAATTGGATACCACTGGTTGATACTATTAAGTTAAGAAACGGGTCCGCATTTTCCTTCTGGTATAACTTCTTTGGGAATGTTGTTTGGTTCTTTCCATTTGGTATGATGCTCCCCTATAGCTTTAAGATGAAGCGTGCCTTCTTCATCACGTTACTTTGGGGATTGTTATTTTCCGTATCAATTGAAACCATGCAATTTTATTTAGAAACAGGCGTAAGTCATATTGATGACGTCATTTTTAATGGCGCAGGGGTAATCATCGGTTACCTGATCTATGACATTTTGAAAATCAGCAACAGGTATATAAAAGGGAGAAGAAATACAAATGGCTAAAAAGAACACACAATTACCAAAAATGGAACTGCGTAAATGGGCAACAGTCCAAGTGAAAAAAGGACAAATCCTTTTAACTGAGAAAGACTTCGTTAATCCACCATCATTTACTGAAGGTGAACTAGTCGAAATCATCGGTATCGACCACGAATTCCTAGGATACGGCTACATGGCCAAGCAACATAAAGGTGTTGGTTGGATCCTAACAACTGACCAAAACGCTGACACAGGCTTACTTGGTGACCTTGATTTCGTACAAGCAAAACTTCAAGAAGCCAAAAACCAACGTCAAGCCTTGTTAATCGACGATATGACCACTGCCTTCCGTATTTTCAACGGTGAAGGTGACGGCATCGGTGGTTTCACAATCGACTGGTACGCAGGTTACGCCTTGATCCAATGGTATTCAGAAGGTATTTACCGCTACAAAGACATTATCCTAGAAGCCCTAAACAATGTATTCCCAGAACTTAAAGGTATTGTTGGGAAAAACAGATTCAACTTAGATGGTACAGGCAGTGCTAAACAATCAGAAGTTTTAGCTGGCGACATTCCTGAAACCTTAACCATCCAAGAAAACGGTGTAAACTACATCGTTCGTCTTGATGACGGTTGGATGACAGGGATCTTCCTTGACCAACGTAACGTCCGTAACTACATTCAAACTGAAATTGCACCAGGTAAATCATTGCTGAACTTGTTCTCATACACAGGTGCATTCTCTGTCGCTGCAGCGCTAGGTGGGGCAGCTGAAACGATGAGTGTTGATGTGGCAAAACGAAGCCTGCAATTAACACAAGAACAATTCCAAGCGAATGGTTTAGAAATCGGTGACCAACACAAAGTCCGCGTGATGGATGTCTTCAATTACTTAGATTATGCCAAAACACATGACTTACGTTTTGACATCGTGGTCCTTGATCCACCATCATTCTCACGTACGAAAAAACACACGTTCCAAGCAAGTAAAGACTACCGCAACCTAGTTGCTTCAGCATTATCAATCTTAAACACAGGCGGTTACTTGGTAAGTTCAACAAATGCCGCCAACATGACTAAAGAAGATTTCATTAAACAGATCGGTGAAGGTTCAGATGACGCACGCGTGGACATCATGCCTGTAGCTGACTTTGGCTTACCAGTCGACTTCCCGGCACCAAAAGGTAACCCGGAAAGTGACTACCTAAAAGTAGAAATCTTCCAAAAATTATAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP013988|284448:296023|291306_291687_-|WP_059348413.1|DBSCAN-SWA
MNQVQLIGRLAREVALTEISNNRQVVNNAVAINRKGKDGTDYVDFIPITAWNGTAKLIDTYMQKGDELAVVGQLRMRQFENKQGQNVSTIEVQVSEVTFLRKKIGIDQPQNPDEQLMANIETLILD
>NZ_CP013988|284448:296023|284448_285387_+|WP_026465257.1|DBSCAN-SWA
MAEEIQKFDVVVVGAGPAGMTAALYASRANLSVALLERGIPGGELVNTADVENYPGFKNIQGPDLANEMYEGAMQFGVVHEFGTVTKVTPNEGAHLLETDMGKTYQAKAIIIATGSVHRKLGVPGEDKYSGRGVSYCAVCDGAFFRDKDLRVIGGGDSAVEEGTYLTQFGKNVNIVHRRDELRAQKILQDRAMSNDKVDFTWDTVVKEIKGDDMKVTGLAVENVKTGEITDVDTDGVFIYVGLIPNTEAFADLNITDEEGWVITNEDMQTNIPGIFAIGDVRQKKLRQISTAVGDGAIGGQEAFNYIETLND
>NZ_CP013988|284448:296023|285613_287338_+|WP_059348410.1|DBSCAN-SWA
MNWKETYLQWRNFEDLDGALKEDLASIEADEKLLEDAFYQPLSFGTAGMRGILGAGINRMNIYTIRQATEGLANLLEDYGQDAKDRGVAIAYDSRHMSPEFAMESAKTLGAHGIKSYVFEALRPTPELSFAVRELNAFAGIMITASHNPADYNGYKVYGEDGGQMPPVDADAVTANVRAVENPLTVEVGDEAALKADGTITIIGEEIDQKYLDNMKAVVVDQAVIDEMADQVSIVYTPLHGTGQMLVERTLADAGFTNVTYVAEQKEPDADFSTVKSPNPEEAGAFEVAEKYGKDNDADILIATDPDADRMGAAVKLPNGDYQVITGNQIAALMTHYILTAKKNTGTLPDNGVILKSIVSSEMPTTIAKSFGVETVDVLTGFKFIAEKIKNYEADASKTFLFGFEESYGYLVKAFVRDKDAVQATLLLAEVAAFYKKQGKTAYDGLQDLFAEYGTYQEKTISVSLPGQEGATKIEAILNNLRGEGLSEIAGQAVVETEDYLQDTRQFADGTTEALGMDKSNVLKYYLADETWIAVRPSGTEPKIKFYIGVVADSLEATQAKIKAYEAALNDLTA
>NZ_CP013988|284448:296023|291948_292674_+|WP_026465264.1|DBSCAN-SWA
MNILMIEDNESVAEMMSMFFEQQKDWEATFIQDGEEGWQHYLANEETIEMVILDLNLPSKDGIQICRDIRQQNKQVPIIMLTARDAESEQVLGLGLGADDYVTKPFDPITFMARMRALYRRSQLSESSVEATEEKGNADQFDIQTEFIRINSQNREAFYKDQLIQHLTPKEFEILQLLARRPKQVFTREHLLTTLWEDPFYGDERTVDAHIKKLRQKMEEYGPQLIQTVWGVGYKFDETGV
>NZ_CP013988|284448:296023|290684_291110_-|WP_026465262.1|DBSCAN-SWA
MSIFQVVYVLCLAIQLGFYFSFSNTIMPVLGKQAGNVGQRIMQDINKQVENDQFLGSFFAPIFLFIAIILLGNPIDWQIYLSFVIYFVGVIGVTIAFNMPLNRQLANRKIRTDWTDFVQQWSRWNHVRTGSALVALALAIS
>NZ_CP013988|284448:296023|287410_288298_+|WP_059348411.1|DBSCAN-SWA
MNDQLKLVIITGMSGAGKTVALQSFEDMGYYCVDNMPPSLLPKFWDLIKETGKISKICLVIDLRSRSFFDELLTEINGMDNTNTIEMSVLFLEADDQTLVARYKETRRAHPLQKDGVSVLEAIQKEKILLNDIRKESSVIDTTNLTPRKFRELLLTEFQSEDEGTFTVNVMSFGFKYGLPIDSDIVMDVRFLPNPHYIDELRPMTGLDAPVYDYVMSQPETETFYRKFTDLLDFELPLYEKEGKSSLTITIGCTGGQHRSIALTERVAHHIQDLGYKVNIIHRDRTKRKESMNLS
>NZ_CP013988|284448:296023|289350_290295_+|WP_016897946.1|DBSCAN-SWA
MASFAGDVKKELTQLTVDYEHARSELAAILRMNGSISLMNGQLILNVQTENAAIARRIYSLLKEFFHTHGELVVRKKMKLKKNNIYIVRVKDRVEEILKDLEILDTLVINPNISAEMMENEQRSRSYLRGAFLAGGSVNNPEKSAYHLEIYSVYEEHCEDLVTMMNKFNLNARSVERRSGYIAYLKGSEQIADFLALIGATSSMLRFEDIRIVRDMRNSVNRIVNCENANLNKTVTAASKQVENIELIQATVGIGELPEKLQEIALLRLENPEASIKELGELVDGEPISKSGVNHRLRKINQYAEQLRNTAITQ
>NZ_CP013988|284448:296023|294802_296023_+|WP_016897940.1|DBSCAN-SWA
MAKKNTQLPKMELRKWATVQVKKGQILLTEKDFVNPPSFTEGELVEIIGIDHEFLGYGYMAKQHKGVGWILTTDQNADTGLLGDLDFVQAKLQEAKNQRQALLIDDMTTAFRIFNGEGDGIGGFTIDWYAGYALIQWYSEGIYRYKDIILEALNNVFPELKGIVGKNRFNLDGTGSAKQSEVLAGDIPETLTIQENGVNYIVRLDDGWMTGIFLDQRNVRNYIQTEIAPGKSLLNLFSYTGAFSVAAALGGAAETMSVDVAKRSLQLTQEQFQANGLEIGDQHKVRVMDVFNYLDYAKTHDLRFDIVVLDPPSFSRTKKHTFQASKDYRNLVASALSILNTGGYLVSSTNAANMTKEDFIKQIGEGSDDARVDIMPVADFGLPVDFPAPKGNPESDYLKVEIFQKL
>NZ_CP013988|284448:296023|288294_289326_+|WP_059348412.1|DBSCAN-SWA
MINKNPRPGRRPKVAVIGGGTGLPILLEGLKNADCNVTAIVTVADDGGSSGSLRNAVSTIPPGDIRNCLVALSDMKKIYKDVFQYRFSEEDKEFSGHAIGNLIIAAIAEMRGDTFAALRLLSYMMEVDGKVLPACEEALVLQGHFADGTMIEGETAVVAHPDQIQEVTVRLANDRPKVDVSGNPITSPRAGREVVSEIMKADMVILGPGSLYTSILPNVAIEEIRNAIVDTPAKVVYICNIMTQLGETEHFSDADHVRVINEHLGAKAIDTVLLNKTPVPFEYLEGASEKDYLVQITQDRQGLADQKCQVVGCDFLNLEKSGVYHNQDKLVGAIMDVMNDRIK
>NZ_CP013988|284448:296023|294159_294810_+|WP_059348414.1|DBSCAN-SWA
MYFLGPLLIWLEDISAGRILNFHLVELSLFSLDKTIFYMIALLVIQAGIIFYKRSKNTNYSIDWFREAIKFIFAIYLILLVHLTVLRYDWQWWQASFNFERSLSELNWIPLVDTIKLRNGSAFSFWYNFFGNVVWFFPFGMMLPYSFKMKRAFFITLLWGLLFSVSIETMQFYLETGVSHIDDVIFNGAGVIIGYLIYDILKISNRYIKGRRNTNG
>NZ_CP013988|284448:296023|292676_294119_+|WP_026465265.1|DBSCAN-SWA
MKLNFFYQQILSFLVVIGMTIAAMGVTLFSFSRDQVLLRQEQQLNDIAHFISGQTISPEFLASMEPLLQSSNMKLFYFNADNELIYPTDEAVAIPNNQLTDEELKTLENGHDLNLRTFEMGFTEKVGDALAIFMPLTNAENQSFAGYLVIGVPSSQSDAIIDNLVHNVVKGIMIALIIAVIFSVIIAGYQNKRIRRIQEATQKIAQGDYSVRLEVSNIDEFDDLAKDFNQMAVALRESEVEIDRQENIRRQLMMDVAHEIRTPLTTMIGLLEGLRQKVLPEDKIDRSVDLMYKEANRLNRLVNENLDIEKIRSNEIVLKKSKFNAAEVLRDISLQLSETAKVKHIKFELDMPDEVPIYADYDRFHQIIFNITQNAVQFTDYGEIFMSSAFQDGETYIKIKDSGMGMTKEQVENIWERFYKADISRKNNEFGESGLGLSIVKQLVELHQATIHVESEAGVGTIFTLVFYDRETLAEKNKVE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026465257.1|284448_285387_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.2e-85	48.9
WP_059348410.1|285613_287338_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	6.1e-181	55.7
WP_059348411.1|287410_288298_+	RNase adapter RapZ	NA	NA	NA	NA
WP_059348412.1|288294_289326_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	3.4e-86	49.2
WP_016897946.1|289350_290295_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	8.6e-52	37.9
WP_026465262.1|290684_291110_-	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_059348413.1|291306_291687_-	single-stranded DNA-binding protein	A0A097BYB0	Leuconostoc_phage	3.4e-07	30.4
WP_026465264.1|291948_292674_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.7e-29	33.6
WP_026465265.1|292676_294119_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.2e-32	33.5
WP_059348414.1|294159_294810_+	VanZ family protein	NA	NA	NA	NA
WP_016897940.1|294802_296023_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	6.6e-89	46.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP013988|765445:774174|DBSCAN-SWA
TATGTTCGTTAGAATTATTATGGGAAGTTCAAGTGATGTTGAAATCGCCCGCAAAGTAACTAGTAACCTAAGTAAATTTGAAATTCCTTACCAAGTATCTGTGATTTCCGCTCACCGCGCTTTAGATGATCTACAAGCCTTAGTTGGACAAAATGACGCTGACCTTTATATCGGTATTGCCGGTAAAGCGGCACATTTACCAGGGGTGATTGCTGGCATGACTGTTAAACCAGTAATCGGTGTACCGGTAAAATCTTCAACCTTGTCAGGTTTAGATGCCTTGTTATCTATCGTTCAAATGCCTAAAGGTGTCCCAGTTGCGACAGTGGCCCTTGATGGTGGCGAAAACGCGGCTATTTTAGCCGTACAAGTTTTAGCGGTGGCAGACCAAGCTTTAACAGAAAAATTAAACGACTATAAAAAAGAATTAAGCGCTGGTGTTCGCGACATGAACAACGAAGCAGCGATTCAAGCGTTGTAGTAGGTGGCTAAATGAGTGGTATTTTAGGCGTTTACTCTTTCGATAATATTGAAGCATTTCCGCATCTATATTACGGTCTCTATGCCCTGCAACACCGAGGGCAAGCGGCCGTCGGTATTGGGACAATTACGCCAGATGGTGACAGTCAATTGATCCGTGAAAAAGGGTTAATCAGTGAACATTTTGGTGACGGTTTGATTGAACATATGCCGGGGAATAAGGGGATTGGATTTGTCCAATACCCCTTTGAAAACCGGGAAAGTGAGCCTATGCCTTTTTACCATGAGGGGGCTTTAATGGCGATTGATGGGGAAATTGAAAATGAAGATTTCACCTACCAGGCTTGTATTGAAGTGCTTGGGCAAGATATTGAAACAATTAAGGCTTATTTTGAAGCTTTAATCGGTAAATTTACCTTGATTTATATGAACAATGACCGGTTTATCGCCTATAAACATTTGGACGGGATTAAACCTTTAGCCATTGGGAAGATGGACGATACCATCATTGCGAGTTCAGAAACGGCAGCTATTGATTCGATTACTGGGCACGTAATTCGTGAAATCCAACCGGGTGAATTGTTTATTCAAACAAAAACACAATGCATTTCTTACTACCTATCAGCCAACATGGAAGCAACTGAAAGCCTGGATGCCTTCGAGTTTATTTATACGGCGCGTCCGGATTCCATTCTAGACGGGATTTCTGTCTATGATGCTCGTTATCGTTTAGGGGAAACCTTATGGCAAGAAGACCAATTGCACAAAGGAATTGTGATTGGGGCACCAGAATCGGGTGTGATTTCGTCTATGGGTTACGCTAAGGCGTCAGGATTACCCTATGAGCAAGGATTTGTTCGTAACCGCTATATTGGCCGGACCTTTATCCAGTCATCGCAAACCATTCGCGAACGAAATATTGAAATCAAATTGACCCCAATTAAAAGTATTGTGGCCAATCGTGAAGTCATTTTAATCGATGATTCCATTGTGCGGGGTTCAACTATTAAACGAACGGTCAACACCTTAAAAGAAGCAGGCGCAAGTAAGATTCATGTGCGAATTGCTGCGCCACCAGTTGTGAAGGGTGAATCGATGACCGTGGATATTCCAGACAAGCACCAACTTGTGGCTTACAACCGATCGATTGAAGAAGTGAGAGATTTGATTGGCTGTGATAGCTTGAAATATATTTCTTTAGATGGCTTTCACCGTGCCATCGGGCGCAGTAAACTTTATGAACCTTATTTTACTGAAGAATAAGCGACAGATAGAAGATAATAGGAGAGCAAAATGGGATTAGATTATAAATCTGCTGGGGTCAACAAAGAAGCCGGCTACCAGCAGGTGCAATTAATTAAAGACATGATGAAAGCCACTTATACAGATCAGGTGATGACTGAAACAGGTGGTTTTTCAGGTATGGTTGAACTAGGTGCGTCTGATATGAAGGCGCCCGTCTTAGTTTCTGGAACTGACGGGGTGGGGACCAAATTAATGGTGGCCCAAGAAGTTGGTATCCATGATACCGTTGGGATGGACCTTGTCGCGATGTGTGTCAATGACATTATCTGCCAAGGTGCCAAGCCCTTATTTTTCCTGGACTATATTGCAACAGGTAAACTAGTTCCTGGCAAAATGGCCAGCATCGTCCAAGGGGTAGCCGAAGGTTGTAAACAAGCTGGTGCTGCCTTAATTGGTGGTGAAACTGCTGAAATGCCAGGTATGTACGGCGAAGATGACTATGATTTGGCCGGATTTGCGGTCGGTCTAGTCGATAAAGAAAAAATTATTTCAGGAAAAGACATCAAAGCGGGCGATATCGCCATTGCTTTGCCGTCCTCTGGTGTCCATTCTAATGGATTTTCTTTAGTTAGAGCTATATTAGAAAAAAATAAGATTGATTTTAATAATCAATATCGAGATACTAATAGGACGGTGGGCGAAGTTTTACTGACACCCACAAAAATCTATGCTAAAGATGTGCTAGCTTTAATCGAGGCCGTGACTGTCAAAGGGCTAGCCCATATTACAGGCGGTGGTTTATTTGAAAATGTACCGCGTACTTTACCTGAAGGGCTTGGTTTAGCAGTTAACCGTGACCAAATCCCGACGCTAGATATTTTTGACTATTTACAAGATCTAGGCCAGGTGGCAGAGGATGAAATGTTTGGAACCTTTAACATGGGGGTCGGTATGGTTATTTTCCTAGACCCAGCGGATGTTGACACAGCCTTACAAGTTTTAGCGGCTAATGACAGCGGCGCCTTTAAATTAGGGCAAGTGACGACGCAAGCTGACGGAGTATCTTTTGTATGATCAAAATTGGCGTTTTAATTTCTGGCGGTGGGACCAATCTGCAGGCCATTATAGATGCTTGTCGGCTAGGCGACTTACCAGCTAAAGTATCAGTGGTCATTTCAAATAAGGCAGATGCTTATGGTTTAGAACGGGCCAAAAAGGCTGGGATTGACCAATTATATACCAATGATGATGAGCGGATTCTAGCGACTTTACAGGGCTATGACGTGGATATTGTGGTTTTAGCAGGATACTTGAAATTGATTGCCAAAGACCTGGTCCAAGCTTTTGAAGGCCGGATGTTGAATATTCATCCGTCACTTATTCCGGCATTTTCAGGTAAGGGGTATTACGGGTTAAAAGTCCATCAAGCAGCAATTGATCGCGGGGTTAAAGTGACTGGGGCTACCGTTCATTTAGTGGACGAAAATTTTGATGAAGGGAAAATTCTGATTCAAGAGGTGGTTGCCATTTTGCCGACAGACACTGCAGAAACCTTGCAGGCACGCGTTTTATCAGTAGAACATAGGATATTGATTACAGCTATCGCTGAAGTCATTGGCGGTCTAGACGGCTAGGTTTAGCTATTAGACGAAGAAAAAAATAATACGGAGACATAAGGAGACGAATATGAAAAGAGCTTTAATTTCTGTTTACGATAAGACTGGTATTGTTGAATTTGCGACCAAATTAGACCAATTAGGTTGGGAAATCATCTCTACAGGTGGGACAAAATCTTTATTAGAAGAGGCTGGAATCAAGGTGATTTCTGTTGAAGAAGTAACCAATTCACCTGAGATTTTACAGGGGCGTGTGAAGACTTTACACCCACATATTCATGGTGGGATCTTATTCAACCGTGACATTCCTGAACATCAAGAAACAGTTGATGAATTAGGGATTCATGCCATCGATATGGTGATTAATAGCTTATATCCATTTGAAGAAACCGTGAAAAATGCGGCCTCATCTAAGGCAGAAATTATTGAAAAAATCGATGTTGGAGGCCCTTCAATGATCCGTGCAGCAGCTAAAAACTACAAAGACGTCTTAATTGTTACTGACGCAGCGGATTATGATTTAGTTGCTGACGCTTTGGAAAATGACAACAATACCCTTGAATTACGGGAAAACTTAGCTGCAAAAGCCTTCAGATTAACGGCTTTCTATGATGCCATGATTGCTGAGTACTTTACTGGCCTAGCTGATGAAAAATTCCCAGAATTATTAACAAAAGCCTTCCGTTATAAGGAAGAATTGCGTTACGGGGAAAATCCCCACCAAGCAGCTGTTTACTATGAAAGTCCGCTTGAAGAAGACTTTGACCTAGAACAATTACATGGGAAACAAATTTCTTACAACAACTACAATGACATGCGGGCCAATATGGACCTTGTCCAAGAGTTTGACGAGCCAGTTTGTGTGGCAGTCAAACATGCCAATCCATGTGGGGTAGCGGTTGCTGATACACCGGCAGAAGCCTACAGAAAAGCATTTGCTGGGGACCCAGTGTCTATTTTCGGTGGGATTATTGGTTTTAACCGCACGGTTGATGCTGAAACAGCTGAAGAATTGTCGAAAATTTTCCTAGAAATTATCGTGGCGCCTGACTTTACGGAAGAAGCTTTTGCCATTTTGGCCAAAAAGAAAAATCTACGTTTAGTTAAATCGACTAAATTAGGCAAATTCAAGGGTAAAGGGACAACTTACAAGGAAACAGTAGGTGGCTTGTTAATCCAAGATAAAGACTTACCGATCTACGCTGAAACAGGTCTTGAACTTAAAACAGACCGTCAAGTAACGGACGAAGAGTTAGAAGATATGGACTTCGCTTGGAAAGTGGCTAAACACTGTGCGTCAAACGCCATGGTCATTGCAAAAGACAAACAAACCTACGCTTTAGGCCACGGGGAAGTGCGTCGTGTGTGGGCGCTTGAAGATGCCTTACAACGGTCTGAATTCCCATTAGAAGGGGCAGTTGTCGCTTCAGACGGCTTCTTCTTCCCAGATACCATCGATAGTTTACATGAATATGGCATTAAAGCCATCGTACAACCAGGTGGTTCTGTCCAAGATGAGAAAGTGATTCAAGCAGCTAAAGCTTACGATATTTCAGTTGTGTTCACTGGCATGCGTCATTTCAAACACTAATGACGAGCTGTTAATTCCTAAGGAGAAATCATGAAAATTCTAATTATTGGTGCTGGTGGTAGAGAACATGCCATTGCTTGGAAATTGGCCCAGTCCGACCGACCAGTTGATATTTTTCTAGCACCTGGAAATGCAGGTACGGCAAGTGAGTATACCAATGTCCCAATCGACGTGATGGACTTTGACCGCTTACTTGATTTTGCCTTAACTGAGGCCATTGATCTGGTGATTGTAGGGCCAGAAGATCCGCTTTGTGCCGGCATTGTGGATGTCTTTAAAGATGCTGGTATTGCTGTTTTTGGTCCTGACAAAATCAGTGCCCAACTAGAAGCTAGCAAGGATTTGACCAAGCAATTTTTGAATAAATATCAAATTCCAACTGCCAACTCTTTTACCACAGCTGACTTTGACCAAGCCAAGGACTATATCAACCAAGCTGACCTGCCAATCGTTATTAAGGCGGACGGTTTATGCAAAGGTAAGGGCGTCGTGATTTGTCACAGTCTTGAAGAGGCAGAGGCCACTTTAAAAGACATGTTGCTTGATCAAAGTTTCGGGGATTCCGCTAGCCAAGTCGTTATTGAAGACTATTTAGATGGCTATGAGCAGTCACTTTTATGTTTCGTGTCCAATAATCAATTGGTACCCATGGATACGGCCCAAGATTATAAGAAGGCATTTGATGGCGATTTAGGGCCCAATACGGGTGGCGTAGGTGTTTACTCTTTACCAAAAACGCCTGAAACCACAGATCCAGCCTTGGATGCACAGATTAAAGCTATTTTGGGGCAGATTGAACGTGGGTTAATCGCTGAAAAATTTTCTTTTTATGGGATTTTGTTTATTGGCTTTATGATTCAAGATGGCCAAGCGAAAGTCTTGGAATTTAATGTCCGCTTTGGGGATCCTGAGACGGAAGTCCTTTTACCAAGACTGGAAAGTGACTTGCTGACAGTTTTTGAAAAAACCTTAGCTGGCACTTTAAAACCCACAGATTTAATTTGGTCAAAGCAAGCAGCAGTCGGCGTGGTCTTATATTCAAAAGGCTATCCTGGTTTTTACGACAACCATGTTGCGATTGAATCCTTACCTGAAAACGCCTTGATTTTCCACAACGGTACGACGACAGATGAAGCAGGGCAATTGATTACAAACGGTGGTCGTGTCCTAACGCCAGTTGCCTTAGCAGACGACATTCAAAGCGCCCGCCAGGCAGCCTACAAGCATGTGGGCCAGATTCGCGGCGCATCACTGACTTACCGGACCGATATTGCCAAGTTATAAATGTAAATTCTTTTTCCAATGCTAGTATGCGACAGCTATTCCAATGGGGTAGCTCAGTATACTAGCTTTTTTATTGGCAAAATGGCTAAGTTATGGGGAAAACGCTAACAGAAAATAAAAAACGTTTTCATGGAAAAATCCATATTTTTCTGGACCTGATCCGTTGACATTGGTGAATTTCTAAGTAAAATAGTTAGTATGCGAACTATAAGGTTCGGGTGCGAACTAATTAAAAATAGACATGTAAGGAAGGTGAAGAAGTGATACATGAGGATCGTCCATTATATATAGGTGGTCTGCTACGGGAGTTAACAATTGCAGTCCATCGAAATATTGGTGTAGAACTTAGTGAGCACGAATTGGGAGATATGAAGGGTCCACAATCGATGGCATTGGGTTATCTAATCCATGCGTCAGCACAAGATGAAATCTATGTGAAAGACCTGGAAAAATATATGAAGATTCGTAAATCTACTGCGTCTGAATTGGTCAGCCGATTAGAGAAGAATGGGTATGTGAAGACGGAGAAATCGCAAAAAGATGGTCGATTAAAGAGGCTAATTGTTACAGAGGAAGGACATGAAGCCCATGACCGGATTCTCCAATTTTTACAAGAGATAGATGACAGACTAGTTGAAGGTCTCTCAAAGGAAGAGGTCGATACTTTCGTCAACTTGTTAAATAGACTAATTCAGAACATGCTGCCTTAAAAAGGTGAGTATTAGGAGGTAATGAAAGGTGCTAAAAATATTAGCGAAAGCAAATAAAAAGGAAAAATTTTTCGCTTTACTAAGTGTGCTGCTGATTATGCTGCAAGTTTACTTAGAGTTAGAAATCCCTGACTACATGTCAGAAATTACAGAATTACTACAAATGCCAGATACTGTGACAGCGGATATTTGGGAACCAGGTTTAATCATGGTTGGTTTATCACTAGCATCTTTTGCCTCTGCTATATTGGTAGGTTTTTTTGCTGCACGTATTGCTGCAAGTTTAACTGCCCGTATTCGTGGGGAAGTGTTTGATAAAGTCATGAGCTATTCAGCCAATGAAATCAACCAATTTTCAGTGCCAAGTTTAGTGACGCGTTCTACCAATGATTTGACCCAAATCCAAATGTTGATTGCTTTAGGACTACAAGTCGTTTTACGGGGACCAATCATGTCCATTTGGGCGATTGCGAAAATTTCCGGTCAAAACTGGCAATGGTCAATGACAACTGCTGTCGCTGTGGGTGTTTTATTAGTGATGATTGGATTTATCATGTACTTCGCTGTCCCTCGTTTCAGCAAAATCCAAACCCTGACCGATAATTTAAATGCCGTGACTCGTGAAAACTTAACTGGTTTACGCGTTATTAGAGCTTACAATGCAGAAGAATATCAAAATAAAAAATTCGCAAAAGCTAATGACGACTTAACCAATACACAACTCTTTGTTAACCGTGTAATGGGGATCATGCAACCCGGTATGACCCTTGTATCCAGCAGTTTAACCCTAGTAGTGTACTGGTCAGGTGCTTACTTAATCGCCGATGCAGCGCAAGGAACAGCGCAAATTAACTTATTCTCAGACATGGTTGTCTTCTCATCTTACGCCATGCAAGTCATCATCGGATTTCTGTTGATGGTCATGATCTTCATGATTTTACCGCGTGCCATCGTTTCGGCAAAACGGATCAACCAAGTGCTTGATCTAGCACCATCCATTGATTTTAAAGAAGATGCGATTCAAACAAGTGAACAAGGATCTGTTGAATTCAAAAACGTCACTTTTAAATATGGTGATGATGCCAAACCAGCCCTTAAAGATATCAATTTCAAAATCAACAAGGGTGAAACCTTAGCCATTATCGGTTCAACTGGTTCAGGTAAATCGACTTTAATCCAAATGATTCCACGTTTATACGACGTATCTGAAGGACAAGTACTTGTCGATGGGCAAAATGTCAAAGACTTTGACCACGCTGGATTGAATAATATTGTTGGCTACATGCCACAAAAACCAGTTCTATTTTCAGGCACAATTCGTTCAAATATGAACCTTGGTGAAAGTAACGAACACCTTGAACATGAGTCCTTATCAGACGCTGAAATTTGGGCTGCCTTAGACACTGCACAAGCAAGAGACTTTGTTGAAGGAGAACCTGACCAATTGGATACCCATGTTGCCCAAGGTGGTAACAATTTCTCCGGTGGTCAAAAACAACGTTTAGGGATTGCCCGCGTGCTTGCTCGTAAACCAGAGATTCTAATCTTTGATGACTCATTCTCTGCTTTGGACTACCAGACAGATAAGACCTTGCGTGGCGTTTTAGCAGAACGTATGGCTGACACCACTAAGATCATTGTAGCCCAACGTATTTCAACTATTATGGATGCGGACGAGATTTTAGTACTAGATAGAGGCGAAATTGTTGGCCGCGGTACACACCAAGAATTATTAGCGGACAACAAGGTATACCAAGAAATTGCTTATTCACAATTATCAGAGGAGGAATTAGCAAATGACTAA

Protein sequences of DBSCAN-SWA_2

>NZ_CP013988|765445:774174|765936_767187_+|WP_016896850.1|DBSCAN-SWA
MSGILGVYSFDNIEAFPHLYYGLYALQHRGQAAVGIGTITPDGDSQLIREKGLISEHFGDGLIEHMPGNKGIGFVQYPFENRESEPMPFYHEGALMAIDGEIENEDFTYQACIEVLGQDIETIKAYFEALIGKFTLIYMNNDRFIAYKHLDGIKPLAIGKMDDTIIASSETAAIDSITGHVIREIQPGELFIQTKTQCISYYLSANMEATESLDAFEFIYTARPDSILDGISVYDARYRLGETLWQEDQLHKGIVIGAPESGVISSMGYAKASGLPYEQGFVRNRYIGRTFIQSSQTIRERNIEIKLTPIKSIVANREVILIDDSIVRGSTIKRTVNTLKEAGASKIHVRIAAPPVVKGESMTVDIPDKHQLVAYNRSIEEVRDLIGCDSLKYISLDGFHRAIGRSKLYEPYFTEE
>NZ_CP013988|765445:774174|768239_768803_+|WP_026466293.1|DBSCAN-SWA
MIKIGVLISGGGTNLQAIIDACRLGDLPAKVSVVISNKADAYGLERAKKAGIDQLYTNDDERILATLQGYDVDIVVLAGYLKLIAKDLVQAFEGRMLNIHPSLIPAFSGKGYYGLKVHQAAIDRGVKVTGATVHLVDENFDEGKILIQEVVAILPTDTAETLQARVLSVEHRILITAIAEVIGGLDG
>NZ_CP013988|765445:774174|772398_774174_+|WP_059348721.1|DBSCAN-SWA
MLKILAKANKKEKFFALLSVLLIMLQVYLELEIPDYMSEITELLQMPDTVTADIWEPGLIMVGLSLASFASAILVGFFAARIAASLTARIRGEVFDKVMSYSANEINQFSVPSLVTRSTNDLTQIQMLIALGLQVVLRGPIMSIWAIAKISGQNWQWSMTTAVAVGVLLVMIGFIMYFAVPRFSKIQTLTDNLNAVTRENLTGLRVIRAYNAEEYQNKKFAKANDDLTNTQLFVNRVMGIMQPGMTLVSSSLTLVVYWSGAYLIADAAQGTAQINLFSDMVVFSSYAMQVIIGFLLMVMIFMILPRAIVSAKRINQVLDLAPSIDFKEDAIQTSEQGSVEFKNVTFKYGDDAKPALKDINFKINKGETLAIIGSTGSGKSTLIQMIPRLYDVSEGQVLVDGQNVKDFDHAGLNNIVGYMPQKPVLFSGTIRSNMNLGESNEHLEHESLSDAEIWAALDTAQARDFVEGEPDQLDTHVAQGGNNFSGGQKQRLGIARVLARKPEILIFDDSFSALDYQTDKTLRGVLAERMADTTKIIVAQRISTIMDADEILVLDRGEIVGRGTHQELLADNKVYQEIAYSQLSEEELAND
>NZ_CP013988|765445:774174|768855_770376_+|WP_059348719.1|DBSCAN-SWA
MKRALISVYDKTGIVEFATKLDQLGWEIISTGGTKSLLEEAGIKVISVEEVTNSPEILQGRVKTLHPHIHGGILFNRDIPEHQETVDELGIHAIDMVINSLYPFEETVKNAASSKAEIIEKIDVGGPSMIRAAAKNYKDVLIVTDAADYDLVADALENDNNTLELRENLAAKAFRLTAFYDAMIAEYFTGLADEKFPELLTKAFRYKEELRYGENPHQAAVYYESPLEEDFDLEQLHGKQISYNNYNDMRANMDLVQEFDEPVCVAVKHANPCGVAVADTPAEAYRKAFAGDPVSIFGGIIGFNRTVDAETAEELSKIFLEIIVAPDFTEEAFAILAKKKNLRLVKSTKLGKFKGKGTTYKETVGGLLIQDKDLPIYAETGLELKTDRQVTDEELEDMDFAWKVAKHCASNAMVIAKDKQTYALGHGEVRRVWALEDALQRSEFPLEGAVVASDGFFFPDTIDSLHEYGIKAIVQPGGSVQDEKVIQAAKAYDISVVFTGMRHFKH
>NZ_CP013988|765445:774174|765445_765925_+|WP_016896849.1|DBSCAN-SWA
MFVRIIMGSSSDVEIARKVTSNLSKFEIPYQVSVISAHRALDDLQALVGQNDADLYIGIAGKAAHLPGVIAGMTVKPVIGVPVKSSTLSGLDALLSIVQMPKGVPVATVALDGGENAAILAVQVLAVADQALTEKLNDYKKELSAGVRDMNNEAAIQAL
>NZ_CP013988|765445:774174|767217_768243_+|WP_059348718.1|DBSCAN-SWA
MGLDYKSAGVNKEAGYQQVQLIKDMMKATYTDQVMTETGGFSGMVELGASDMKAPVLVSGTDGVGTKLMVAQEVGIHDTVGMDLVAMCVNDIICQGAKPLFFLDYIATGKLVPGKMASIVQGVAEGCKQAGAALIGGETAEMPGMYGEDDYDLAGFAVGLVDKEKIISGKDIKAGDIAIALPSSGVHSNGFSLVRAILEKNKIDFNNQYRDTNRTVGEVLLTPTKIYAKDVLALIEAVTVKGLAHITGGGLFENVPRTLPEGLGLAVNRDQIPTLDIFDYLQDLGQVAEDEMFGTFNMGVGMVIFLDPADVDTALQVLAANDSGAFKLGQVTTQADGVSFV
>NZ_CP013988|765445:774174|771920_772370_+|WP_016896855.1|DBSCAN-SWA
MIHEDRPLYIGGLLRELTIAVHRNIGVELSEHELGDMKGPQSMALGYLIHASAQDEIYVKDLEKYMKIRKSTASELVSRLEKNGYVKTEKSQKDGRLKRLIVTEEGHEAHDRILQFLQEIDDRLVEGLSKEEVDTFVNLLNRLIQNMLP
>NZ_CP013988|765445:774174|770406_771660_+|WP_059348720.1|DBSCAN-SWA
MKILIIGAGGREHAIAWKLAQSDRPVDIFLAPGNAGTASEYTNVPIDVMDFDRLLDFALTEAIDLVIVGPEDPLCAGIVDVFKDAGIAVFGPDKISAQLEASKDLTKQFLNKYQIPTANSFTTADFDQAKDYINQADLPIVIKADGLCKGKGVVICHSLEEAEATLKDMLLDQSFGDSASQVVIEDYLDGYEQSLLCFVSNNQLVPMDTAQDYKKAFDGDLGPNTGGVGVYSLPKTPETTDPALDAQIKAILGQIERGLIAEKFSFYGILFIGFMIQDGQAKVLEFNVRFGDPETEVLLPRLESDLLTVFEKTLAGTLKPTDLIWSKQAAVGVVLYSKGYPGFYDNHVAIESLPENALIFHNGTTTDEAGQLITNGGRVLTPVALADDIQSARQAAYKHVGQIRGASLTYRTDIAKL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016896849.1|765445_765925_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.2e-28	49.3
WP_016896850.1|765936_767187_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.9e-30	28.4
WP_059348718.1|767217_768243_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SR00	Cyanophage	1.0e-66	45.1
WP_026466293.1|768239_768803_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.5e-24	38.9
WP_059348719.1|768855_770376_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.2e-60	42.7
WP_059348720.1|770406_771660_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_016896855.1|771920_772370_+	winged helix DNA-binding protein	NA	NA	NA	NA
WP_059348721.1|772398_774174_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.9e-34	25.3

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP013988|1039579:1049059|DBSCAN-SWA
TATGAAAGATTATAAAGCGTTAAATTGGTCAAAAACATATGGCATGAAACAACTATTAAATGATGTTTCCTTTTTAATTAGAGAAGGGCAACACGTTGGTTTGGTTGGGGCCAATGGTTCAGGTAAGACCACCTTATTAAATATTATTGCGGGGAAATCTAGCCTAGATCAAGGGCAGATCGAACATCCAAAAGATTTTACAGTGGGCATTGTCACTCAAGATCCAGAGCTAGATGAAAGCCAAACGATTTTTGAGGCTGTTTATCACTCTGAAAGTCCTATCGTCCAATTAGTTGGTCGGTATGAAGAAATTACCTTAGACTTGCAATTAGAACCAGAAAATAGCCAATTACAAAAGAGATTTCAGCAGATTGAGCAAGAAATGAATGCGCAAAACGCTTGGACTTTGGATACGACAATCCAAACGATCTTATCTAAATTAGGTATTCATGACCTAACCCAAGAAGTGAACGTCTTGTCTGGGGGCCAACGAAAACGGGTCGGTTTGGCTAAAGTTTTGATTGAAGAACCGGATTTGTTACTGATGGACGAGCCTACCAACCACTTGGATTTTGAAATGGTGGAATGGTTAGAAAACTACATTGCTAATTACAAGAAATCAGTCCTAGTTGTAACCCATGACCGGTACTTCTTAGACCAAATCACAACACATATCTTTGCTTTGGACCGGGGTGACTTGAAGCAATACGAGGGTAATTACCAAATTTATTTGGAAAAATTGCAGTCTGAGCATGAAATTGAAGCAGCAACTATGGCAAAACAAAAGAAACTGTACAAGAGTGAGTTGGCTTGGATGCGTAAAGGGGCTAAAGCTAGAACCACTAAACAACAAGCCCGCATTCACCGGTTTGAAAACTTGAAAGAAAAAGTAAGCCAAACAACAGATGATAGCGAATTGACAGTGGACTTGGATACTCAACGGTTGGGTAATAAAGTCCTTGAATTCGATAACTTAACGGTAGGTTACCCAAATAAACCCTTAATCACCAATATCAATCTATTATTACAGAATAAGGAGCGTATCGGGATAATCGGGGATAATGGGGCTGGTAAAACGACCTTCCTAAACACCATTGCTGGCATACAAGCGCCACTTTCAGGTGAAGTAAAAACGGGTGAAACGGTCCGTATCGCCTACTTCCAACAAATCCCTACTGACCTACCAGAAGACAAAAGGGTGATCAACTACGTGCAGGAAATCGCTTCTGAGTACGTTTATGATGACGGGACCCAAGCATCTGCAGCGCAAATGCTAGAGCAATTCTTGTTCCCCCGTGAATCGCATGGCATGTTAATTGGCACGCTATCAGGTGGGGAAAGAAAACGACTGTACCTATTGAAGATATTGATGACTAGACCCAATGTCTTACTTTTAGACGAACCGACAAACGATTTAGATATTGATACCTTATCTGTCTTAGAAGACTACCTAGAGACCTTCCAAGGAGCTGTGATTACCGTTTCCCATGATCGGTATTTCCTAGACAAGGTGGTTGAGAAGCTTATCATTGTGGACAGCTTGGACAATACAGTACAATTATTCTATGGTAACTACCATGACTATAGAGACGCAATGAAACAAGCAAAAAATCAATCTAGTCAATCGCAAAAAGTGTCCAGTCAAAGTAAGCCAAGCAACCAAGCTACTGAGTCAGTGACAGAAGAGTCACCAAAAGCTAAGCGAATGTCTTGGCAAGAGAAGAAAGATTGGGCCGTTATTGAGAGTGAAATTGAACAATTAGAAATGGATATTGAAGACATTGACCAGGCAATGAACGAAAACGGAAATGATTACGGCAAACTATCCGAATTGCAATTAGAGAAAGATAGCAAAGAAAATGATTTGCTTGAAAAAATGAGCTACTGGGAATACCTATCTACATTAGAAAATTAGTATCAGAAAATTTATTATGAAATAAAAAAACAAGAAGTTGATTCAAATTAAATTAGGGGGCAATGAGTTTGGCAAAGCAATACTTAGATTTTCTACAGCACATTTTAGATAATGGACAAGATAAGAGCGACCGTACGGGTGTAGGTACCAGATCAGTTTTTGGTTACCAAATGCGTTTTGATTTAAGCGAAGGATTTCCTTTATTAACGACTAAAAAAGTACCTTTTGGTTTAATCAAGAGTGAATTGTTATGGTTCCTAAAAGGGGATACCAATATCCGCTATTTACTAGAAAATAACAATCATATCTGGGATGAATGGGCCTTTAAGCGTTGGGTTGAATCTGATGCTTATCAAGGACCAGATATGACGGACTTTGGTTTACGAGCTGACGCTGACCCAGAATTTAAAAAGATCTATCAAGAAGTGAAACAAGAATTTTGCCAACGCGTCTTAGAAGATGATGATTTCGCTAAAGAATTTGGTGAATTAGGGAATGTTTACGGTAAACAATGGCGTCATTGGGAGACACGTGAGGGTGATGCCATTGATCAAATTGCTAATATTATCGACCAATTGAAACATAACCCAGATTCACGTCGGATTATCCTTTCAGCTTGGAACCCAGAAGATGTGCCAGATATGGCTTTACCACCTTGTCATACAATGAGTCAATTCTACGTTCAAGATGGTAAGTTATCTTGCCAACTCTACCAACGTTCTGGCGATGCCTTCCTAGGTGTACCATTTAATATCGCCTCTTATGCTTTATTGACACATTTATTGGCACGTGAGGCAGGATTAGAGGTTGGGGACTATGTTCATACCTTTGGCGATGCGCATATTTACAATAACCATTTTGACCAAGTTAATGAACAATTAAGTCGTCAACCACTTGACCTACCAACTTTAGAAATTGGTGGCGAAGGTAAATCCATCTTTGATCTAGAAAAAGATGATATTAAAGTTAAAGGTTATAAAGCACATGATGCAATTAAGGCACCAGTAGCGGTATAATAATAGATAACAATCAAGACCTATTTCTGTCACAAGTTGATAAGGAGGAATTACTATGTTAATTGCAATCTGGGCACAAGATATCAACCATTTAATTGGAAAAGGTGGCAAACTACCTTGGCACTTACCAAACGACTTGAAGTTCTTTAAAGAACAAACAGTTGGTAAGACTGTTGTGATGGGGCGTAAGACATACGCAGGTTTGGATTATAAGCCATTACCAAACCGTCACAATATTATTATTACCCGCCAGAAATCACCTTTTGAATCAGACTATGACCAAACGGATGTTGAATTAACCGATTCTATCGATAACATCTTGGCGCTAGCTGAAAAAGAAGATGTGATTATTATGGGTGGCCAGTCTATTTACCGCCTATTTTGGCCTTATATTTCTGAATTACGCGTGACAACAATTAACTATGAATTTGATGGGGATGTCCATTTTGACCCAAACCTAGATGACTTTGAAGCTTACGAGGTGATCGAAGGGGTGGTGGATGAGAAGAATGCCTACCCACACAAATTTGTATTCTACCGAAAAGAGGACGAGGACTAGAAGAAGGAGTAGGTTATTTGGCTAAACAAAATAACACTAAGACGAAGAGACCATTAAATCTTTGGAAGTGGGCTTTTTGGTTATTACTATTGGCAATTTTGGTACCTGTAATTGCTTTATACCTGTATATACAAACAGCTGATCAAGAAACTGCCAGCGTGGGTGAACCAGCAACGACAGAAGAAGTGAGTGATGAAACGATCACATCAGAAGCCAACCTGTCGACTGTTTCCTTCAACCGACTAGTATCAGCAGTGATCGGTGGGGATGATGTGCCTTATCAGTTAACGGTGGATGACCAAGTGTCATTTGCTGGTACGATAGACGCTTTGGGGACTAAAGTGGCTTATACCATGCAAGGGCAGCCGTCAGTCATGGAAGATGGGAATATCGCCATTGATGTGACCAATATTGAATTAGCGGGCTTACAATTGCCAACTTCAACAGTATTGGCTATTTTCCAATTGACCTTACCTACAGATTTACCGCTACAAGTGTTATCCGGTGAAGAGCAAATTATTATCCGATTGGACCAAGTGTCTGAAGACATGGATTTCGCTATCCGGGCCAGTGATATTGACTTAGCAAACGATGAAATCAACATCTTACTGGATGTGCCATTGACCTATATCGAGGAACAAATCGGGACAGAGGCGGAAGGTAACCAGTAATATAGTCAACAATAAGAAAGAGTGATGATTACGCAGTCCTTTTATCATTATGTACAAATATTTAGAAATGCCGATTTACTAGATAGTGACCAGCAGGCGCAGTTTGCTGAGCTGGTCTTTTTAGATGGCGATTTTCCGAAATCAGCTAGCGATTTTGAAACAATTAGCAATTATATTGAATTAAACCAGCGCTATTCTGACTACGTATCGACATTTGATGAAGTTTGGCAATCCTACGCCGATAAATACCAAGTGTAGGAGGAAATATTGGGTAAATATTTGAAACCAACATGTCTATCAGAAAGTAGTGAATCATATGTCAGAAAATGAAGATTTAAAAAATAAAGAAAATAATAAAAATAATAAAAATAGCAATGAAGAATCAGATAAAATAGCAGTTACTGAGGAAGAAATCCATTCAAGTGGTCGAGACGGACATGAGCTGGGTAATGACCAAAAACCTAAAAAACGCGGGGTTTCTTGGCTAGTATATATCCTGACCATCCTTATCGTTGGTGGGGGAACTTTTGTTGGGACATCTTACGTCTTAACTGGCCGTTTACCTGGTCAAAGTGTTATTACAGGGTCCTCAGGTACGGCGCTAACCACCAGTGAAATCCAAAAAATCCAAGCTGCCTTCTCTACAATTGTGGGAGACTACGTAGAAGATGTGGACCGGGATGCGGTTGTTGACGGGGCTATTTCTGGGATGACGGAAGTCCTTGAAGACCCATATTCTCAGTATTTAACCGATCAATCAGCCCAACAATTAGATGAGACCATCGAAGGGTCATTTGAAGGTATCGGGGCTGAGATCATGGAAAAAGAAGACTACATTCAAATTGTCAGCCCAATTAAAGGGTCCCCTGCTGAGGAAGCCGGCTTAATGGCTAATGATATCATCACAGCTGTAAACGGTGAATCCATCCAAGGTTATACCGCCACAGAAGCAGTCGCTTTAATCCGCGGTGAAGCAGGCAGTGATGTTGTTTTAACGATTCAACGTGGTGAAGATACTTTTGACGTGACCGTCACTAGAGATACCGTTCCAATTCAAACCGTTTATTATGAAATGTTAGAAGGCCAAGATAACACTGGTTATGTTCAAATTACTAGTTTTTCGACTCCAACATACGACGAATTGGTTGCAGCTATTGAATATTTAAGATCACAAGGAGCTGAGAAATTTGTCCTAGACGTTCGCAGTAACCCAGGTGGTTTATTAACTTCTGCCCTACAAATCGCCAATATGTTCCTAAATGATGGGGATACCATTATGCAAGTCCAAGAAAAAGATGCGGATCCTTATGTATATGAAGCATCAGACGCTGATTACGGCGACTTCCAAGTTGATGAAGATGTGGTCTTATTAGTAGACGAAGGGTCTGCTTCAGCTTCAGAAATCCTAGCTGCAGCTCTACAAGAATCTGCAGGTGTACCAGTAGTTGGTAGCCAAACATTTGGTAAGGGGACCGTGCAAAATGTCTTCTCCCTTGAATCTGATTCAGAACTGAAAATTACTATTGCCAAATGGTTAACACCAAATGGTACTTGGATCAATGAAACAGGGGTAACGCCGGATGTTGAAGCTAGCTTACCGGATTATGCATCTCTAACCTTAATTGATACCAGCCAAACTTACCAAGAGGGCGATGTTTCAGAAGCGATTCAAAATATTGAAGCGATTCTAGTGGCTTTAGGCTACCAAGATAGCCAAGTGGATGCTGTTTTTGCAGAGGATACAACTAGTGCTGTGCTAGCTTTCCAAGCGGACCAAGGACTCGCTGAAACAGGTGTGATTGATACGGAAACAGCAAGTGCCATGATTTCGGCTATCCAAGCATTAATTGCTTCTAATGACACCCAACTAGACAAAGCAGTAGAAGTTCTGGAATAATAAGGACAAAAGCGCTAAAATAGTAGGGTGCTATAGGTACAAATGACTATGCTAAAAGAATGGGTAATAGAACCCAGTGAAAAGGATTGACCTTATGAAAAAGTTTTTTGATGAAGTATTTTCAGTTGTGATTTCAGTTGTGATCGCGCTTGTTATCTTCTGGGTGGTTAGAACTTATTTCTTCTATCCCTTTAGAGTAGACGGCGATTCGATGGCTAACACAATGATAGATGGGGACCGGTTTGTCCTAAGTTTAACGGATGATATTGACCAGTCAGATATTGTCGTTTTCCCTGCACCAGATGGGTCTGGCGACGAGTATGTGAAACGGATTATTGGGGTTCCAGGTGACACGATTGAATACAAAGATGATGTTTTATATATCAACGACGAAGCAATCGATGAGCCTTATTTAGATTCTATTAAAGAAGACTACTTTGAACGATTCCCAGATGATTCTACTTTCACTAATGACTTCACGCTTGAAGATATTACGGGTGAAACAACTGTCCCAGAAGGTATGTACTTCGTATTAGGAGACAACCGTGAAGTGTCTCATGACTCACGATACTTCGGCTTTATTGATGCTGATAGCGTGGAAGGAACTACCCACTTTAGATATTGGCCATTTTCCGACTTCGGTAGTGTACAATAAAGTAAAAATAGATTTGAGATGTAAAAACAGTAGCAAATATGCATTAAAAAGTTGGCGCACTTAGCCAACTTTTTTACATGAAAGGAGCTTAACCATGGCACATATTCAATGGTATCCTGGCCATATGGCTAAGGCAAAAAAAGAGGTTCAAAGTCAACTGAGCGCTGTAGATATCGTCCTTGAAATTAGGGACGCTCGTATTCCAACAGCCAGCATGAACCCCATGTTAGATGAAATCATTAAAAATAAACGCCACATGATTGTTTTAAATAAACAAGATTTGGCCGACCCCCAACAAACCAAAGAGTGGGTCAAAGCTCTGAGCGGTGAAAACAAATTGGCCATTGCTTTGGATTCTAAAAAATTAGGGGACATGAAAATTTTCCGCCAAGCCCTAAAAGATTTCACCCAAGACATCCAAGACAAATGGCGCAACAAAGGTATTCTACACAAGTCGATCCGAGTAATGGTTATCGGGATTCCAAACGTTGGTAAATCAACCTTTATCAACCAGTTTACCAAGCAAAAGAAAGCCCAAGTAGGGAATAAACCAGGGGTTACTAAAGGCCAACAATGGATTAAAATAGATAAAGATTTTGAACTATTGGACACACCAGGTATTTTATGGCCGAAATTTGAAGACCAAGAAGTAGCTGACAAATTGGCCCTAACTGGTGGGATTAAAGACACCCATTTCTACAAGGATGATGTGGCTTTATTCGCCCTAGAATTCTTCCTACATCATTACCCGGATGCCATCAGCAACCACTACCCAATCAATGCCGAAGACGTCCATCCGCCTTATCCTGACCTACTGATGGCCTTAACCAAGCGTATGGGCATGTTAGAAGACTACGACCGCGCTTCAGACAAGATTATCCGTGACTATCGAGACGGTAAATTGGGCCGCATGACCCTAGACCGGATTGAAGAATACCAAATTTCAGAAAATATTGAGGTAAGTGATTAAATGACTGAGGAGAAAAAGACAGCCTTTGACCTCGCTGACTTAGGTAATTTAAAAATCGGCCAAATTCAAGCCTACTTGGCCTCAAGTGAGGTTGATCCAGTCTACGTACAGGCCTTACGAGAAGATAGCCGCAAAGGGGTGCAAAACGCCTTATTACGCTATGACAAGGCCATAGTTAAGCAACAAGCCATCTTAGACCAGATTGAACAGCTGAAAACACGAGAAAACGAATTGCGTCAACAAGGCTACCAATTGATTGCTGGGGTAGATGAAGTGGGACGTGGTCCGTTAGCCGGGCCCGTTGTCACTAGTGCCGTTATTTTGCCTAGTGACATGCCTCCTGTCTACTTTAATGACTCTAAACAGTTATCCCATACAAAACGCCAAGCATTGGTGGCAGATATTGAAAAATATGCTATCGCAAAAACAATCGGGATCCAAACTGCTGAAGAAATTGACCAAACCAACATTTTAATTGCTACAAAGCAAGCGATGATATCTGCTTTAGATCAATTACATCCGGCTCCTGATTATGTCTTGGTCGATGCTGTCCATTTGAATGACTACAAGAAGGCGCCGCAAGAGGCCATTATCAAGGGCGACGCGACAGTTTATGCCATTGCAGCAGCCTCTATTTATGCTAAGGAATACCGGGATAAATTGATGGCAGAATACGCAGACTTATATCCAGGTTATGGCTTTGAAGCCAATGCTGGGTATGGGACTAAACAACACCTAGATGGCCTAGAAAAATACGGTCCAAGTCCAATTCACCGCAAGACTTTTGCGCCAGTGAAAAATTATGTATAAAAATCAATCAATCTAAATGGTCAATTTCAACCACCTCCTACGTATATACATGTAAAGGGGTGGTTTTGTGTTATTTGAAATTGAAAATCCATATATTGATATGATGCTCAAAAATGAGGAAGATGTTTTAGCTATGACAGAATCTATGCTGGTTTATGCCTTTGAATCTGGTGTATTTACCTACCGGGAATTGGCCGATATGATTCAAGCCCAAGTGACTAGTGTTGAAGACTTAGACAGGCATATTCATGGAATCCAAGATACGCAAAAATTAAAGGCCTGGGGGCGATTTAAGCAAAAGTATTCACTTGCTTATTTTAGAAAATTGTACAAAAGGTACCATATTCATCCGGTGACCATCCTTAGTACGCAAATATATCCAAAGGCCTTACTGCAAATCTACCAACCTAATTTAGTTTTATTTTGTCAAGGTGATTTAGCTATTTTTCAAAAACCTGCTATGGCTGTTGTAGGATCAAGAAAGATGTCTGTCTACGGTAAAGCAGCTATTGACCAGCTAATCCCTGAATTAAGTGAAGCCGTGGTCATTGTCTCTGGTTTAGCCAAAGGGGTGGATGCCTATACCCACCAAGCAGCCATGTCTGGGGGCGAAACCATTGCGGTTATCGGGACGGGCTTGCTGACTTCATACCCGAGTGAACACCACAAATTGCAGGCAAAAATTGCCCATGACCATTTACTCGTTTCACCGCTACCCAACCACGCTAAAATTCAACGCTGGCATTTCCCTTACCGAAATCTAACTATTGCCGGACTCAGTCAAGCGACGATGGTTATTGAGGCGGCAGAAAAATCTGGTTCTTTAATAACGGCTAATTATGCCTTACAAGAAAATAGACTGGTTTTTGCAGTGCCAGGGCCTATTTCGAACCCTTTATCTGCAGGGACCAACCAATTAATTTACTACGGTGCCACACCGGCATTACAGGCTTCAGAAATATTGCGCGACTTATTTTTCAATGTATAG

Protein sequences of DBSCAN-SWA_3

>NZ_CP013988|1039579:1049059|1039579_1041493_+|WP_059348863.1|DBSCAN-SWA
MKDYKALNWSKTYGMKQLLNDVSFLIREGQHVGLVGANGSGKTTLLNIIAGKSSLDQGQIEHPKDFTVGIVTQDPELDESQTIFEAVYHSESPIVQLVGRYEEITLDLQLEPENSQLQKRFQQIEQEMNAQNAWTLDTTIQTILSKLGIHDLTQEVNVLSGGQRKRVGLAKVLIEEPDLLLMDEPTNHLDFEMVEWLENYIANYKKSVLVVTHDRYFLDQITTHIFALDRGDLKQYEGNYQIYLEKLQSEHEIEAATMAKQKKLYKSELAWMRKGAKARTTKQQARIHRFENLKEKVSQTTDDSELTVDLDTQRLGNKVLEFDNLTVGYPNKPLITNINLLLQNKERIGIIGDNGAGKTTFLNTIAGIQAPLSGEVKTGETVRIAYFQQIPTDLPEDKRVINYVQEIASEYVYDDGTQASAAQMLEQFLFPRESHGMLIGTLSGGERKRLYLLKILMTRPNVLLLDEPTNDLDIDTLSVLEDYLETFQGAVITVSHDRYFLDKVVEKLIIVDSLDNTVQLFYGNYHDYRDAMKQAKNQSSQSQKVSSQSKPSNQATESVTEESPKAKRMSWQEKKDWAVIESEIEQLEMDIEDIDQAMNENGNDYGKLSELQLEKDSKENDLLEKMSYWEYLSTLEN
>NZ_CP013988|1039579:1049059|1042564_1043068_+|WP_059348864.1|DBSCAN-SWA
MLIAIWAQDINHLIGKGGKLPWHLPNDLKFFKEQTVGKTVVMGRKTYAGLDYKPLPNRHNIIITRQKSPFESDYDQTDVELTDSIDNILALAEKEDVIIMGGQSIYRLFWPYISELRVTTINYEFDGDVHFDPNLDDFEAYEVIEGVVDEKNAYPHKFVFYRKEDED
>NZ_CP013988|1039579:1049059|1043085_1043739_+|WP_059348865.1|DBSCAN-SWA
MAKQNNTKTKRPLNLWKWAFWLLLLAILVPVIALYLYIQTADQETASVGEPATTEEVSDETITSEANLSTVSFNRLVSAVIGGDDVPYQLTVDDQVSFAGTIDALGTKVAYTMQGQPSVMEDGNIAIDVTNIELAGLQLPTSTVLAIFQLTLPTDLPLQVLSGEEQIIIRLDQVSEDMDFAIRASDIDLANDEINILLDVPLTYIEEQIGTEAEGNQ
>NZ_CP013988|1039579:1049059|1043763_1043997_+|WP_016897095.1|DBSCAN-SWA
MITQSFYHYVQIFRNADLLDSDQQAQFAELVFLDGDFPKSASDFETISNYIELNQRYSDYVSTFDEVWQSYADKYQV
>NZ_CP013988|1039579:1049059|1041555_1042509_+|WP_026466084.1|DBSCAN-SWA
MSLAKQYLDFLQHILDNGQDKSDRTGVGTRSVFGYQMRFDLSEGFPLLTTKKVPFGLIKSELLWFLKGDTNIRYLLENNNHIWDEWAFKRWVESDAYQGPDMTDFGLRADADPEFKKIYQEVKQEFCQRVLEDDDFAKEFGELGNVYGKQWRHWETREGDAIDQIANIIDQLKHNPDSRRIILSAWNPEDVPDMALPPCHTMSQFYVQDGKLSCQLYQRSGDAFLGVPFNIASYALLTHLLAREAGLEVGDYVHTFGDAHIYNNHFDQVNEQLSRQPLDLPTLEIGGEGKSIFDLEKDDIKVKGYKAHDAIKAPVAV
>NZ_CP013988|1039579:1049059|1045730_1046291_+|WP_059134308.1|DBSCAN-SWA
MKKFFDEVFSVVISVVIALVIFWVVRTYFFYPFRVDGDSMANTMIDGDRFVLSLTDDIDQSDIVVFPAPDGSGDEYVKRIIGVPGDTIEYKDDVLYINDEAIDEPYLDSIKEDYFERFPDDSTFTNDFTLEDITGETTVPEGMYFVLGDNREVSHDSRYFGFIDADSVEGTTHFRYWPFSDFGSVQ
>NZ_CP013988|1039579:1049059|1047261_1048071_+|WP_082685353.1|DBSCAN-SWA
MTEEKKTAFDLADLGNLKIGQIQAYLASSEVDPVYVQALREDSRKGVQNALLRYDKAIVKQQAILDQIEQLKTRENELRQQGYQLIAGVDEVGRGPLAGPVVTSAVILPSDMPPVYFNDSKQLSHTKRQALVADIEKYAIAKTIGIQTAEEIDQTNILIATKQAMISALDQLHPAPDYVLVDAVHLNDYKKAPQEAIIKGDATVYAIAAASIYAKEYRDKLMAEYADLYPGYGFEANAGYGTKQHLDGLEKYGPSPIHRKTFAPVKNYV
>NZ_CP013988|1039579:1049059|1044055_1045636_+|WP_059348866.1|DBSCAN-SWA
MSENEDLKNKENNKNNKNSNEESDKIAVTEEEIHSSGRDGHELGNDQKPKKRGVSWLVYILTILIVGGGTFVGTSYVLTGRLPGQSVITGSSGTALTTSEIQKIQAAFSTIVGDYVEDVDRDAVVDGAISGMTEVLEDPYSQYLTDQSAQQLDETIEGSFEGIGAEIMEKEDYIQIVSPIKGSPAEEAGLMANDIITAVNGESIQGYTATEAVALIRGEAGSDVVLTIQRGEDTFDVTVTRDTVPIQTVYYEMLEGQDNTGYVQITSFSTPTYDELVAAIEYLRSQGAEKFVLDVRSNPGGLLTSALQIANMFLNDGDTIMQVQEKDADPYVYEASDADYGDFQVDEDVVLLVDEGSASASEILAAALQESAGVPVVGSQTFGKGTVQNVFSLESDSELKITIAKWLTPNGTWINETGVTPDVEASLPDYASLTLIDTSQTYQEGDVSEAIQNIEAILVALGYQDSQVDAVFAEDTTSAVLAFQADQGLAETGVIDTETASAMISAIQALIASNDTQLDKAVEVLE
>NZ_CP013988|1039579:1049059|1046385_1047261_+|WP_026466079.1|DBSCAN-SWA
MAHIQWYPGHMAKAKKEVQSQLSAVDIVLEIRDARIPTASMNPMLDEIIKNKRHMIVLNKQDLADPQQTKEWVKALSGENKLAIALDSKKLGDMKIFRQALKDFTQDIQDKWRNKGILHKSIRVMVIGIPNVGKSTFINQFTKQKKAQVGNKPGVTKGQQWIKIDKDFELLDTPGILWPKFEDQEVADKLALTGGIKDTHFYKDDVALFALEFFLHHYPDAISNHYPINAEDVHPPYPDLLMALTKRMGMLEDYDRASDKIIRDYRDGKLGRMTLDRIEEYQISENIEVSD
>NZ_CP013988|1039579:1049059|1048171_1049059_+|WP_059349378.1|DBSCAN-SWA
MMLKNEEDVLAMTESMLVYAFESGVFTYRELADMIQAQVTSVEDLDRHIHGIQDTQKLKAWGRFKQKYSLAYFRKLYKRYHIHPVTILSTQIYPKALLQIYQPNLVLFCQGDLAIFQKPAMAVVGSRKMSVYGKAAIDQLIPELSEAVVIVSGLAKGVDAYTHQAAMSGGETIAVIGTGLLTSYPSEHHKLQAKIAHDHLLVSPLPNHAKIQRWHFPYRNLTIAGLSQATMVIEAAEKSGSLITANYALQENRLVFAVPGPISNPLSAGTNQLIYYGATPALQASEILRDLFFNV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059348863.1|1039579_1041493_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.5e-58	30.9
WP_026466084.1|1041555_1042509_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.4e-115	61.4
WP_059348864.1|1042564_1043068_+	dihydrofolate reductase	A0A1Q2U372	Vibrio_phage	5.4e-21	37.5
WP_059348865.1|1043085_1043739_+	YpmS family protein	NA	NA	NA	NA
WP_016897095.1|1043763_1043997_+	D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_059348866.1|1044055_1045636_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.8e-25	30.3
WP_059134308.1|1045730_1046291_+	signal peptidase I	NA	NA	NA	NA
WP_026466079.1|1046385_1047261_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_082685353.1|1047261_1048071_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	1.2e-22	34.9
WP_059349378.1|1048171_1049059_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	7.4e-21	45.8

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NZ_CP013988|1743482:1749613|DBSCAN-SWA
CCTATTGTTGTTTAATTTCCTTGAATAAATTAATCATTTCAATAGCATTCGTTGCATAAGTAAAACCAAGGTTACCTGCTTTAGTACCAGATCGTTCAATAGCTTGTTCGATGTTTTCAACGGTTAAGACACCAAAAATGACCGGTAATTTATGCGTTAAACCTACTTGAGATACCCCACTTGACGCTTGATTAACCACCACATCAAAATGACTTGTAGCCCCTCTAATCACAGCACCCAGTGTAATGATCGCATCGTATTTACCTGTTTCAGCCATCGTTGCAGCCGTCAGCGGGATTTCATAAGCGCCCGGTACCCAAGCAACATCGATATTTTCTGTCAAAACACCTGAACGCGTAAGGCCATCTTCACAACCACTTAGTAAGCTTTTAGTTAAAAAATCATTGAATCGTGCAATGACAATCCCAATTTTAACATCTTCTCCGTTGTACAATTTTCCTTGAATAATATTCATGCTATTTTCCTCCATATTTTATAAGTCTAATAAATGACCCATTTTTACTTTTTTAGTGATTAAGTAGTTTTCATCATCCGGATTAGCAGCCATTTCAATACTCACACGGTTGGCTACTTGGATACCCGATGCTTCTAATTGTGCGATTTTATCAGGATTGTTGGTCATAAGGTCAATGGATGTCACACCCAGTTCCCCTAACATTTGTGCAGCCGTATGGTATTCCCTTAAATCATCTGGGAATCCTAGGGCATGGTTCGCTTCTACAGTATCCAGTCCTTCTTCTTGTAACTGGTAGGCTTTTATTTTATTGATTAAGCCAATGCCACGACCTTCCTGTCTTAAATATAAGAGAACGCCTTGGCCAGCTTCATTGATTTTCCGCAGGGCTTCATGTAATTGCTCTCCGCAGTCACACCGGTTTGATCCCAATACATCTCCTGTTAAACATTCAGAATGCAAACGCGTTAGGACCTGTCCCTTACCTGAAACATCCCCTTTTACCAAAGCCACATGTTCTTGATTATCTACATCGTTGATAAAAGTATGGATAGTAAATTCACCAAATTTTGTCGGCATTTTAGCTTGTGATACATGGTGGGTATGACGCTCAGTTTTTAACCGGTAGTCTTGTAAGCCTTTAATAGTGATGACTGGCATCTGCCACATCTCTGCTTGCTTAAGCAATTCGGCTTGGCGCATCATCGTACCGTCTTCGCGCATAATTTCTACACAAACACCCACTGGATTCAGTCCAGCTAATTTCATTAAATCAACCGTTGCTTCTGTATGACCATTTCGCTCCAACACACCATTTTCTTTCGCCACCAACGGGAAAACATGTCCCGGACGGTTAAAGTCACTGGGTTGACTAGCCGGATTTGCTGCTTCACGCATGGTTAACCCGCGTTCAACTGCGGATACACCTGTGCTTGTCTCTTTATGGTCAATGGATACCGTAAATGCGGTTGTATGTGGGTCTGTATTATCCTCCACCATTGGCGACAAGTTTAATCTATCAGCAGTTTCTCGGCTCATTGGCTGGCAAATTAACCCTTTAGCATGAGTCGCCATAAAATTAATATTAGCTGTTGTTGCAAACTCTGCTGCACAAATTAAGTCTCCTTCATTTTCTCTATTCTCATCATCCAAAACCATGATAATTTGACCCGCTTGTAAAGCTGCTAATGCGTCTTCGATTGTTGAAAAATCCATCTATACCCTCTCCTTCACTGCAAATTGCTCAATATACTTACCAACAATATCATTTTCTAAATTCACGATAGTGCCTACTTGATAGGTTGAAAAGATTGTTTGTTCACTGGTGTGAGGAATGATTGATACTTTAAATGTATCTCCATCAACGCCAGCAACCGTTAAACTTGTACCATCAATAGCAATAGATCCCTTCATGATGATATAGCGCATTAATGGTTTACTTGTTTGAATCGTGTACCAATTAGCGATACCATCCGCCTCAATTGCGGTGATTTTACCAATACCATCAATATGGCCACTTACAATATGACCACCAAATCTCGCATTTGCCTTCATCGCCCGTTCCAGATTCACGCGGCTGTTATTAACAATACCTTCTAAAGACGTTTTCGCAATCGTTTCTGGCATCACTTCAACTTGGAAATTGATATCAGTGTAATTCGTCACAGTAAGACAAATGCCGTTCACACTAATAGAGTCACCTAGATTGACATCGGATACTATTTTTTCCGAGGCAATGGTTAAAAGAAGTCCTGCATGATTGTTGATGGCCTCGATACTTTCAATACGGCCAATATCTTCGATAATTCCTGTAAACATTTAATCCACCCTACTTTCTATCAAAAGGTCCTTACCTAATGGCGTGATTGCTTGGATATAACTTGTGAGCGCTTGGTCCATATGTGGAAAACCGAAACCACTAATAGGGCTATACTGGTCAAAACCACCAATGACTTTGGGACCAATATAAGTGTGGATTTCCTCGATTAACTCTGATTCAAGTAGCGAAGCATTTAGTCTTGATCCGCCTTCAACATAAATACTTTGAATACCTTGGTGACCTAGTTGTGTGATTAAATCCACTAAATCTACCTTGTCATTCTTCGCATTCACAACCAATAGCTGACAGCCAGCTGCTTGATAGGCTTGGTGATCTTCTGGGTCCTGATTAGTTGTCGCAATAATTGTGGGCGTTTGCTTCGCTGTTTTCACTAATTGGCTGGTTAAGGGTAGCTTCAAGCTCGTATCACAAACAATACGGATAGGATTAATCCCCTCAAAGTCGTCAATTCGAACTGTTAACGATGGATCATCAGCAAGCGCAGTCCCTATGCCAACCATAATGGCTTGGTTACTGTGGCGTTGGTAATGCACATGCTCTCGTGCAATTTTGTCCGTTATCCACTGGGAATCCCCAGTATAGGCGGCCGTTCGACCATCTAGGGTCATGGCATATTTCATGGTGACATAGGGGCGTTGATGAGTCATAAAGTAATTGAATTTACGGTTAAGATCTTCACTCTCTTCAGCCAAAAGACCCGTTTCTACTTCAATATGGTGGTTTCTTAATTCCTGGATGCCTTTTCCAGCAACTAATGGATTCGGATCAATTGCAGCAACTACCACTTTTTCAATACCCGCTTCGATAATAGCTTGCGTACAGGGAGGCGTTTTACCAAAATGACAGCAGGGTTCCAGCGTGACGTACATAGTTGCCCCTTTTACATCATGCCCTTGTTCGCTGGCATCCTTTAAGGCTTCTCTTTCCGCATGCAAACCACCATACTGCTGATGATAGCCTCGACCGATGATTTGGCTATTCTTTACGATAACTGCACCAACCATAGGATTAGACCTTGTCCAACCCTGTCCTAATTTGGCTAGGTCAAGTGCTTCTTGCATATAGTCTTTCATTCACTCATCCTTTCTCTAAACAACAAATAATCCAGTCAGAGTGACGAAAAAAAGCCCTAGAAATAAGATTTCTAGGGCACACAAATAAACTATAGACTTATAGTATTCGTTTATTTTGATTCTACTCTTCTTCCATCCAGACTCTACTGTCGGTCTCGGAATTACACCGAGTCAGCCCCTAATTAAAGGAGGTCGCGGACTTTACCGCCGGTCGGGAATTACACCCTGCCCTGAAGATTTTATTTGAATGTTTATGGTGATATCATACGGTATTAAAAAGAAAATGTAAACCCAAATGTATTTTTTAAATTAAAAATATATACTATAGAGTATTTATCATGGGTGATTGGATAAAAAATTTCCCTTCACCTGGCCATTTTTACCCAAGTATAGTTTGCCAAACTCATCAATTAAGCCATGGAATTCCTGGGCTTCCTCATAAGTGAAGTCATCCGGTAGGTTAATCTCTTGGTAAAGGCTTTGATAGGTTGTGTACGAATTGCCTGTCAACCAACTGAATAACCGCCTAGCGTAGGCATCAGCGATAAACGCTGGTTGGTCAAATATAAAAACGCGAAATACGTCAGCTGTTTCAAACCCTACCCCGTGTAATTTCAAGATTTCACTTCGCAACTGTTTTCCGTATTCATACTGCACGGCTTGATAATCCCATTTGTGGTTACCAAACCATTGGAAACTGGCTTGAATTGCTCGCGCCTTGTTGCGGTAGAAACCACTTGGTCGAATCAGCGTTTCTAATTCTTCTAACGGGAGCTTTAAAATTTCTTCTGGCAAAAAACCAGTAGCTGCGTTCAAGTTATTTAGGGACTTTTCAACGTTACGCCAGTTGGTATTTTGAACAAGGATAGCTCCCAGGATTATTTCTACCTTAGAATCAGCAGGCCACCAACCTTGTGGGCCCATTTCATTTAATAAGGTATCGTATAACTTTCTAATAGCTAATTTATTCATCATCTCACCCTAAATTATTTTACCGTTATGTGTTATTTTTTTGCATCTTTATGTAAAAATGAATGGATTCCTATCAGCGTCACACCTATACTTTATGGTTGTCTAGCTTGGATTGGTCAATGCCTTCTAAAGCCAGCAAGGCAATTTTGCGGTCGATACCACCTGCATAACCAGTTAATGCACCGTTAGTGGCTACAACCCGGTGACATGGGATTAGAATTGAAATAGGATTATGACCAACAGCGCCGCCAGCTGCACGAGCAGAGCCCCTTTTCCCAGGAGTGGTTAAAGCAACTTTATCAGCTAATTCCTTATAGCTAGTCGTTTGGCCGTAAGGGACATTAATCAGTGCGTTCAGGATTTCCTTACGGTAAGGCGTTACTTCTGGGTCCAAAATGTTTGGGTCAAGGGTCGGGTTTTCACCAGCAAAATAAGCATCTAACCAATTTTTGACTTGCTTTGTCACTGGTGTTTCTCCTTCTACCATAGTCTGTAAGTCGTATTTACCACCAAAGTATCTTTGATCACTAAACCACAATCCTTTAATCGCTTGTTCATCATTCACGATAGTCATTTGACCAAGTGGTGAGGTGTAAGATGATTTGTAATACATGGTAATCCCTCCTGGGTTAAGATGACAGATACCCCAGCTATCTCAAAAAAAGATGGGGATAGCTAGGGTATGGCTTTTATATACTTGTAGTAATGCTATTTATTCTGCGTACTGTGCAATACCATTACCAAAGGACCAGTTCTCTTTATTTACTTCGACTAAGTTGATAAAGACATCTTCTTTGCGAATATCTAATTGGTTATTTAATTTATCAGCAACCGTCTTGTATAAAGCTTTCTTTACCTCAGTTGTACGCCCTTCGTTCATCGTGATTTGAATGATCACGATACCTTCTGTACGGTCAACACCTAGGTAATTGGTAGAAAATATCAGTTCTTCAGCTTTCAAATCATTCACAATAACGAACTTATCTTCTTCAGGGATTCCAATCGTTTCAAGCATAGATTCGTAAACTAACTCACCTAATTGCGTTTTAAATTCTGCAGTCTTACCTTCTAATAGATCGATTCTAACTAATGGCATGTAGCACACTCCTTATCTTTTTGCATAATATTATTATATATGAAAAATTAATTAAATTGCTAGTTTCACCCTACAACAATTTTTAGAAGTACCGTACTATACATTGTTTGATATATGTAAAGGAATATCTTTTTATAGAGACTGGTTGATTTCTAGCATAAAAAAACCGATAACGCTTTTAAGGTCATCGGTTTACTTGATTTAACTATTGTTTGTACTTTTCATGCATTTCATGGTTATTTTATTCATTTGGATCGCTTTCAGCATCTTCTTGAGTGCCATGAACAGTACCAGGTACGTGGTCAGGGCTAGCATAAATGGTGTACAGTTTTAACGGTACACTCCCCCGATTGGTGATATTATGCCATAAACCTAGTGGCACAAAGACTGCCTCATCTTCTCCAACTTTTTGTTCAAAGGATAAATCGTCCTCAGCAGGGCCCATCTGGCAGAGACCCTCACCTTGCTCGATACGGATAAATTGATCACTTTCATGATGTACTTCTAAACCAATATCACCGCCTACAGGAATTTCCATAACAGTCAACTGCAACTTATTACCTGTCCAAATAGTCGTACGAAAATTTGTATTATCTAACGTTTCTTTTTCAACATCTATAATATATGGCTTTTTGTCGTTATCTACATTACCAGTTAGAAATTTATTATCAGTCAT

Protein sequences of DBSCAN-SWA_4

>NZ_CP013988|1743482:1749613|1745774_1746869_-|WP_059349214.1|DBSCAN-SWA
MKDYMQEALDLAKLGQGWTRSNPMVGAVIVKNSQIIGRGYHQQYGGLHAEREALKDASEQGHDVKGATMYVTLEPCCHFGKTPPCTQAIIEAGIEKVVVAAIDPNPLVAGKGIQELRNHHIEVETGLLAEESEDLNRKFNYFMTHQRPYVTMKYAMTLDGRTAAYTGDSQWITDKIAREHVHYQRHSNQAIMVGIGTALADDPSLTVRIDDFEGINPIRIVCDTSLKLPLTSQLVKTAKQTPTIIATTNQDPEDHQAYQAAGCQLLVVNAKNDKVDLVDLITQLGHQGIQSIYVEGGSRLNASLLESELIEEIHTYIGPKVIGGFDQYSPISGFGFPHMDQALTSYIQAITPLGKDLLIESRVD
>NZ_CP013988|1743482:1749613|1747926_1748454_-|WP_026465769.1|DBSCAN-SWA
MYYKSSYTSPLGQMTIVNDEQAIKGLWFSDQRYFGGKYDLQTMVEGETPVTKQVKNWLDAYFAGENPTLDPNILDPEVTPYRKEILNALINVPYGQTTSYKELADKVALTTPGKRGSARAAGGAVGHNPISILIPCHRVVATNGALTGYAGGIDRKIALLALEGIDQSKLDNHKV
>NZ_CP013988|1743482:1749613|1747205_1747844_-|WP_059349215.1|DBSCAN-SWA
MMNKLAIRKLYDTLLNEMGPQGWWPADSKVEIILGAILVQNTNWRNVEKSLNNLNAATGFLPEEILKLPLEELETLIRPSGFYRNKARAIQASFQWFGNHKWDYQAVQYEYGKQLRSEILKLHGVGFETADVFRVFIFDQPAFIADAYARRLFSWLTGNSYTTYQSLYQEINLPDDFTYEEAQEFHGLIDEFGKLYLGKNGQVKGNFLSNHP
>NZ_CP013988|1743482:1749613|1745171_1745774_-|WP_059349213.1|DBSCAN-SWA
MFTGIIEDIGRIESIEAINNHAGLLLTIASEKIVSDVNLGDSISVNGICLTVTNYTDINFQVEVMPETIAKTSLEGIVNNSRVNLERAMKANARFGGHIVSGHIDGIGKITAIEADGIANWYTIQTSKPLMRYIIMKGSIAIDGTSLTVAGVDGDTFKVSIIPHTSEQTIFSTYQVGTIVNLENDIVGKYIEQFAVKERV
>NZ_CP013988|1743482:1749613|1743974_1745171_-|WP_059349212.1|DBSCAN-SWA
MDFSTIEDALAALQAGQIIMVLDDENRENEGDLICAAEFATTANINFMATHAKGLICQPMSRETADRLNLSPMVEDNTDPHTTAFTVSIDHKETSTGVSAVERGLTMREAANPASQPSDFNRPGHVFPLVAKENGVLERNGHTEATVDLMKLAGLNPVGVCVEIMREDGTMMRQAELLKQAEMWQMPVITIKGLQDYRLKTERHTHHVSQAKMPTKFGEFTIHTFINDVDNQEHVALVKGDVSGKGQVLTRLHSECLTGDVLGSNRCDCGEQLHEALRKINEAGQGVLLYLRQEGRGIGLINKIKAYQLQEEGLDTVEANHALGFPDDLREYHTAAQMLGELGVTSIDLMTNNPDKIAQLEASGIQVANRVSIEMAANPDDENYLITKKVKMGHLLDL
>NZ_CP013988|1743482:1749613|1743482_1743956_-|WP_059349211.1|DBSCAN-SWA
MNIIQGKLYNGEDVKIGIVIARFNDFLTKSLLSGCEDGLTRSGVLTENIDVAWVPGAYEIPLTAATMAETGKYDAIITLGAVIRGATSHFDVVVNQASSGVSQVGLTHKLPVIFGVLTVENIEQAIERSGTKAGNLGFTYATNAIEMINLFKEIKQQ
>NZ_CP013988|1743482:1749613|1749178_1749613_-|WP_059349216.1|DBSCAN-SWA
MTDNKFLTGNVDNDKKPYIIDVEKETLDNTNFRTTIWTGNKLQLTVMEIPVGGDIGLEVHHESDQFIRIEQGEGLCQMGPAEDDLSFEQKVGEDEAVFVPLGLWHNITNRGSVPLKLYTIYASPDHVPGTVHGTQEDAESDPNE
>NZ_CP013988|1743482:1749613|1748553_1748937_-|WP_026465770.1|DBSCAN-SWA
MPLVRIDLLEGKTAEFKTQLGELVYESMLETIGIPEEDKFVIVNDLKAEELIFSTNYLGVDRTEGIVIIQITMNEGRTTEVKKALYKTVADKLNNQLDIRKEDVFINLVEVNKENWSFGNGIAQYAE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059349211.1|1743482_1743956_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.6e-36	53.6
WP_059349212.1|1743974_1745171_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.9e-109	51.3
WP_059349213.1|1745171_1745774_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	6.5e-37	41.2
WP_059349214.1|1745774_1746869_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.5e-44	36.0
WP_059349215.1|1747205_1747844_-	deoxyribonuclease I	NA	NA	NA	NA
WP_026465769.1|1747926_1748454_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	3.1e-27	39.3
WP_026465770.1|1748553_1748937_-	tautomerase family protein	NA	NA	NA	NA
WP_059349216.1|1749178_1749613_-	cupin domain-containing protein	Q2I8C5	Bacillus_phage	4.8e-34	51.2