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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014139 Streptococcus pyogenes strain MEW123 chromosome, complete genome 3 crisprs DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3 0 6 4 0

Results visualization

1. NZ_CP014139
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014139_1 604492-604654 TypeI I-C
2 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014139_2 1097850-1098084 TypeII II-A
3 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014139_3 1836684-1836780 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448775 Streptococcus phage Javan489, complete genome 25298-25327 0 1.0
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448794 Streptococcus phage Javan525, complete genome 22421-22450 0 1.0
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448953 Streptococcus phage Javan474, complete genome 27019-27048 0 1.0
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448765 Streptococcus phage Javan459, complete genome 22420-22449 0 1.0
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448957 Streptococcus phage Javan484, complete genome 27899-27928 0 1.0
NZ_CP014139_2 2.3|1098019|30|NZ_CP014139|CRT,PILER-CR 1098019-1098048 30 MK448662 Streptococcus satellite phage Javan97, complete genome 6081-6110 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448522 Streptococcus satellite phage Javan519, complete genome 1870-1914 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448330 Streptococcus satellite phage Javan136, complete genome 2770-2814 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448328 Streptococcus satellite phage Javan130, complete genome 2770-2814 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448513 Streptococcus satellite phage Javan479, complete genome 1870-1914 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448332 Streptococcus satellite phage Javan142, complete genome 2777-2821 0 1.0
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448331 Streptococcus satellite phage Javan138, complete genome 2777-2821 0 1.0
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 MK448762 Streptococcus phage Javan447, complete genome 57-89 1 0.97
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 MK448798 Streptococcus phage Javan533, complete genome 57-89 1 0.97
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 MK448793 Streptococcus phage Javan523, complete genome 57-89 1 0.97
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 MK448967 Streptococcus phage Javan510, complete genome 57-89 1 0.97
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 MK448954 Streptococcus phage Javan476, complete genome 57-89 1 0.97
NZ_CP014139_1 1.1|604525|33|NZ_CP014139|PILER-CR 604525-604557 33 NC_004588 Streptococcus prophage 315.5, complete genome 206-238 1 0.97
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448771 Streptococcus phage Javan481, complete genome 6936-6967 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448681 Streptococcus phage Javan141, complete genome 6534-6565 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448944 Streptococcus phage Javan452, complete genome 11200-11231 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448672 Streptococcus phage Javan117, complete genome 6782-6813 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448849 Streptococcus phage Javan128, complete genome 6685-6716 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448774 Streptococcus phage Javan487, complete genome 6921-6952 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448958 Streptococcus phage Javan486, complete genome 9165-9196 1 0.969
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448742 Streptococcus phage Javan37, complete genome 9157-9188 1 0.969
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448946 Streptococcus phage Javan456, complete genome 26948-26977 1 0.967
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448333 Streptococcus satellite phage Javan145, complete genome 2769-2813 1 0.978
NZ_CP014139_3 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder 1836710-1836754 45 MK448340 Streptococcus satellite phage Javan156, complete genome 2769-2813 1 0.978
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448767 Streptococcus phage Javan467, complete genome 6874-6905 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448973 Streptococcus phage Javan522, complete genome 8841-8872 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448862 Streptococcus phage Javan178, complete genome 6910-6941 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448942 Streptococcus phage Javan448, complete genome 6873-6904 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK449010 Streptococcus phage Javan90, complete genome 9369-9400 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK449012 Streptococcus phage Javan94, complete genome 8203-8234 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 NC_004586 Streptococcus pyogenes phage 315.3, complete genome 6979-7010 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448969 Streptococcus phage Javan514, complete genome 9629-9660 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448943 Streptococcus phage Javan450, complete genome 6874-6905 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448972 Streptococcus phage Javan520, complete genome 6683-6714 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448786 Streptococcus phage Javan509, complete genome 6874-6905 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448778 Streptococcus phage Javan493, complete genome 8856-8887 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448963 Streptococcus phage Javan498, complete genome 3463-3494 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448773 Streptococcus phage Javan485, complete genome 9629-9660 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448851 Streptococcus phage Javan14, complete genome 12142-12173 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448833 Streptococcus phage Javan87, complete genome 9369-9400 2 0.938
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448673 Streptococcus phage Javan119, complete genome 9948-9979 2 0.938
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MK448933 Streptococcus phage Javan420, complete genome 26823-26852 2 0.933
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448964 Streptococcus phage Javan502, complete genome 6853-6884 3 0.906
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 NZ_CP020429 Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence 100887-100918 4 0.875
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 NZ_CP020439 Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence 133702-133733 4 0.875
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 NZ_CP018188 Streptococcus salivarius strain ICDC2 plasmid, complete sequence 108973-109004 4 0.875
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MN480762 Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence 18924-18955 4 0.875
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MN480763 Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence 119912-119943 4 0.875
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448845 Streptococcus phage Javan118, complete genome 8663-8694 5 0.844
NZ_CP014139_2 2.1|1097886|31|NZ_CP014139|CRT 1097886-1097916 31 CP009912 Borreliella chilensis strain VA1 plasmid lp54, complete sequence 48160-48190 7 0.774
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 NZ_CP014852 Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence 135700-135729 7 0.767
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 NC_010895 Bacillus thuringiensis serovar tenebrionis plasmid pBMB175, complete sequence 869-898 7 0.767
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 CP020760 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-21, complete sequence 3892-3921 7 0.767
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 NC_005567 Bacillus thuringiensis H1.1 plasmid pGI3, complete sequence 1823-1852 7 0.767
NZ_CP014139_1 1.2|604591|32|NZ_CP014139|PILER-CR 604591-604622 32 MK448704 Streptococcus phage Javan213, complete genome 8201-8232 8 0.75
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 NZ_CP031836 Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence 84673-84702 8 0.733
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 NZ_CP020458 Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence 86560-86589 8 0.733
NZ_CP014139_2 2.3|1098019|30|NZ_CP014139|CRT,PILER-CR 1098019-1098048 30 NC_021559 Prochlorococcus phage P-SSM3 genomic sequence 77011-77040 8 0.733
NZ_CP014139_2 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR 1097953-1097982 30 MN694808 Marine virus AFVG_250M14, complete genome 476-505 9 0.7

1. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 0, identity: 1.0

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttcta	Protospacer
******************************

2. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 0, identity: 1.0

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttcta	Protospacer
******************************

3. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttcta	Protospacer
******************************

4. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 0, identity: 1.0

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttcta	Protospacer
******************************

5. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttcta	Protospacer
******************************

6. spacer 2.3|1098019|30|NZ_CP014139|CRT,PILER-CR matches to MK448662 (Streptococcus satellite phage Javan97, complete genome) position: , mismatch: 0, identity: 1.0

aataatcagtttaaaaatccatctggagca	CRISPR spacer
aataatcagtttaaaaatccatctggagca	Protospacer
******************************

7. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448522 (Streptococcus satellite phage Javan519, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

8. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448330 (Streptococcus satellite phage Javan136, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

9. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448328 (Streptococcus satellite phage Javan130, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

10. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448513 (Streptococcus satellite phage Javan479, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

11. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448332 (Streptococcus satellite phage Javan142, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

12. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448331 (Streptococcus satellite phage Javan138, complete genome) position: , mismatch: 0, identity: 1.0

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	Protospacer
*********************************************

13. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

14. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

15. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

16. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

17. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

18. spacer 1.1|604525|33|NZ_CP014139|PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 1, identity: 0.97

taaataattacatgactagccaatacacccaca	CRISPR spacer
caaataattacatgactagccaatacacccaca	Protospacer
.********************************

19. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

20. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

21. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

22. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

23. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

24. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

25. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

26. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 1, identity: 0.969

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttactctcaaagtaagag	Protospacer
.*******************************

27. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.967

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatttctg	Protospacer
*****************************.

28. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448333 (Streptococcus satellite phage Javan145, complete genome) position: , mismatch: 1, identity: 0.978

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgccaagat	Protospacer
**************************************.******

29. spacer 3.1|1836710|45|NZ_CP014139|CRISPRCasFinder matches to MK448340 (Streptococcus satellite phage Javan156, complete genome) position: , mismatch: 1, identity: 0.978

ttttgcaaaatctatattaacgcaaataaatttggttgtcaagat	CRISPR spacer
ttttgcaaaatctatattaacgcaaataaatttggttgccaagat	Protospacer
**************************************.******

30. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

31. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

32. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

33. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

34. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

35. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

36. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

37. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

38. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

39. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

40. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

41. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

42. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

43. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

44. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

45. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttactctcaaagtaagag	Protospacer
.***********.*******************

46. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.938

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagctgctttactctcaaagtaagag	Protospacer
.********** ********************

47. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 2, identity: 0.933

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
agacaaaagaaaaagcattgtcaatctctg	Protospacer
*************************.***.

48. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.906

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttttttaccctcaaagtaagag	Protospacer
.***********.*****.*************

49. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttagtctcaaaataagaa	Protospacer
.**************** *******.*****.

50. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 4, identity: 0.875

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttagtctcaaaataagaa	Protospacer
.**************** *******.*****.

51. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 4, identity: 0.875

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttattctcaaaataagaa	Protospacer
.****************.*******.*****.

52. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 4, identity: 0.875

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttattctcaaaataagaa	Protospacer
.****************.*******.*****.

53. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MN480763 (Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence) position: , mismatch: 4, identity: 0.875

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
cttcatgagcttctttagtctcaaaataagaa	Protospacer
.**************** *******.*****.

54. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.844

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
tggaataagctgctttactctcaaagtaagag	Protospacer
*   **.**** ********************

55. spacer 2.1|1097886|31|NZ_CP014139|CRT matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.774

gtcaaactcaatttttttgtctagctctatt	CRISPR spacer
taatatctcaatttttttatctagctctttt	Protospacer
    * ************.********* **

56. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to NZ_CP014852 (Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence) position: , mismatch: 7, identity: 0.767

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
caccagaagcaaaagcattgtcaatttccg	Protospacer
 . **.*** ******************..

57. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to NC_010895 (Bacillus thuringiensis serovar tenebrionis plasmid pBMB175, complete sequence) position: , mismatch: 7, identity: 0.767

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
aaagaaaagaaaaagaattatcaatttact	Protospacer
*.* *********** ***.******* . 

58. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to CP020760 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-21, complete sequence) position: , mismatch: 7, identity: 0.767

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
aaagaaaagaaaaagaattatcaatttacc	Protospacer
*.* *********** ***.******* . 

59. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to NC_005567 (Bacillus thuringiensis H1.1 plasmid pGI3, complete sequence) position: , mismatch: 7, identity: 0.767

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
aaagaaaagaaaaagaattatcaatttacc	Protospacer
*.* *********** ***.******* . 

60. spacer 1.2|604591|32|NZ_CP014139|PILER-CR matches to MK448704 (Streptococcus phage Javan213, complete genome) position: , mismatch: 8, identity: 0.75

tttcatgagcttctttactctcaaagtaagag	CRISPR spacer
ttgcatgagcttctttgctctcaaatgcgctg	Protospacer
** *************.********   .  *

61. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
taaaaaaagaaaaagcatcgtcaattagac	Protospacer
 .* **************.*******    

62. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 8, identity: 0.733

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
taaaaaaagaaaaagcatcgtcaattagac	Protospacer
 .* **************.*******    

63. spacer 2.3|1098019|30|NZ_CP014139|CRT,PILER-CR matches to NC_021559 (Prochlorococcus phage P-SSM3 genomic sequence) position: , mismatch: 8, identity: 0.733

aataatcagtttaaaaatccatctggagca	CRISPR spacer
tataagaagtttaaaaatccatctcaaatg	Protospacer
 ****  ***************** .*...

64. spacer 2.2|1097953|30|NZ_CP014139|CRT,PILER-CR matches to MN694808 (Marine virus AFVG_250M14, complete genome) position: , mismatch: 9, identity: 0.7

agacaaaagaaaaagcattgtcaatttcta	CRISPR spacer
caggaaaagaaaaaggattgtcaataccct	Protospacer
 .. *********** ********* .*. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 36548 : 48861 8 Synechococcus_phage(28.57%) NA NA
DBSCAN-SWA_2 839606 : 895556 68 Streptococcus_phage(45.45%) tail,head,integrase,terminase attL 842973:843032|attR 889140:889235
DBSCAN-SWA_3 1476776 : 1538091 60 Streptococcus_phage(33.33%) protease,tRNA,bacteriocin NA
DBSCAN-SWA_4 1831790 : 1838623 11 Streptococcus_phage(83.33%) integrase attL 1831364:1831378|attR 1838925:1838939
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage