CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008873	Pseudomonas aeruginosa strain F9670 chromosome, complete genome	4 crisprs	csa3,cas3,RT,DEDDh,DinG,WYL,PD-DExK	0	1	8	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008873_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008873_1

1028612-1028725

Orphan

Consensus_repeat	Method
TCATACCTTGCCCTCCAGTTCTTTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008873_1

>merge|NZ_CP008873|1|1028612-1028725|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCCACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGCTCATACCTTGCCCTCCAGTTCTTTGGCC

>NZ_CP008873|1|1|1028612-1028725|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCC	ACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGC
TCATACCTTGCCCTCCAGTTCTTTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008873.1\|WP_003084301.1\|1030814_1031912_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008873.1\|WP_003118764.1\|1020283_1020982_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP008873.1\|WP_003112941.1\|1024017_1025070_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP008873.1\|WP_003118762.1\|1022819_1023431_+\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NZ_CP008873.1\|WP_003107781.1\|1039047_1040109_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008873.1\|WP_003084290.1\|1034985_1036344_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP008873.1\|WP_003112937.1\|1037415_1038792_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP008873.1\|WP_016852354.1\|1025180_1027568_+\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP008873.1\|WP_003084303.1\|1029605_1030760_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP008873.1\|WP_003084320.1\|1021030_1021783_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_016852353.1\|1036384_1037137_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP008873.1\|WP_003112946.1\|1017410_1018181_+\|cystine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270430
NZ_CP008873.1\|WP_003112945.1\|1018947_1019442_-\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP008873.1\|WP_003084299.1\|1032330_1033434_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008873.1\|WP_003111119.1\|1040997_1041876_+\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP008873.1\|WP_016852356.1\|1019707_1020262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003084297.1\|1033549_1034920_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP008873.1\|WP_016852350.1\|1040169_1040835_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP008873.1\|WP_003112942.1\|1023535_1024039_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP008873.1\|WP_003084339.1\|1018252_1018945_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836

Protein	Function_ID	Function_description	E-value
NZ_CP008873.1\|WP_003084301.1\|1030814_1031912_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP008873.1\|WP_003118764.1\|1020283_1020982_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.81845e-78
NZ_CP008873.1\|WP_016852354.1\|1025180_1027568_+\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP008873.1\|WP_003118762.1\|1022819_1023431_+\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00342131
NZ_CP008873.1\|WP_003107781.1\|1039047_1040109_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.00795e-165
NZ_CP008873.1\|WP_003084290.1\|1034985_1036344_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP008873.1\|WP_003112937.1\|1037415_1038792_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP008873.1\|WP_003084303.1\|1029605_1030760_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP008873.1\|WP_016852353.1\|1036384_1037137_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	4.197e-109
NZ_CP008873.1\|WP_003112941.1\|1024017_1025070_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_CP008873.1\|WP_003112946.1\|1017410_1018181_+\|cystine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270430	cd13712, PBP2_FliY, Substrate binding domain of an Escherichia coli ABC transporter; the type 2 periplasmic binding protein fold. This group contains cystine binding domain FliY and its related proteins. Cystine is an oxidized dimeric form of cysteine that is required for optimal bacterial growth. In Bacillus subtilis, three ABC transporters, TcyJKLMN (YtmJKLMN), TcyABC (YckKJI), and YxeMNO are involved in uptake of cystine. Likewise, three uptake systems were identified in Salmonella enterica serovar Typhimurium, while in Escherichia coli, two transport systems seem to be involved in cystine uptake. Moreover, L-cystine limitation was shown to prevent virulence of Neisseria gonorrhoeae; thus, its L-cystine solute receptor (Ngo0372) may be suited as target for an antimicrobial vaccine. The cystine receptor belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.13159e-122
NZ_CP008873.1\|WP_003112945.1\|1018947_1019442_-\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	2.14015e-67
NZ_CP008873.1\|WP_003084299.1\|1032330_1033434_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP008873.1\|WP_003111119.1\|1040997_1041876_+\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP008873.1\|WP_003084297.1\|1033549_1034920_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP008873.1\|WP_016852350.1\|1040169_1040835_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.56691e-09
NZ_CP008873.1\|WP_003084339.1\|1018252_1018945_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79

>NZ_CP008873.1|WP_016852354.1|1025180_1027568_+|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWNGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRTAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP008873.1|WP_003112941.1|1024017_1025070_-|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP008873.1|WP_003112942.1|1023535_1024039_+|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP008873.1|WP_003118762.1|1022819_1023431_+|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_CP008873.1|WP_003084320.1|1021030_1021783_+|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP008873.1|WP_003118764.1|1020283_1020982_-|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESEACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP008873.1|WP_016852356.1|1019707_1020262_+|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGHAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP008873.1|WP_003112945.1|1018947_1019442_-|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP008873.1|WP_003084339.1|1018252_1018945_+|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR
>NZ_CP008873.1|WP_003112946.1|1017410_1018181_+|cystine-ABC-transporter-substrate-binding-protein
MRFLPRLLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQGGKLTGFETELGELLAAELAVKPEFVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKVFDFSEPYTISSAQLIVRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVAGVNVRTYPGAPEYLQDLASKRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPYRKNNPKFGEALNAALEKIKADGRFAKLSEKWFGLDVSQPPK
>NZ_CP008873.1|WP_003084303.1|1029605_1030760_-|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP008873.1|WP_003084301.1|1030814_1031912_-|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP008873.1|WP_003084299.1|1032330_1033434_-|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP008873.1|WP_003084297.1|1033549_1034920_-|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP008873.1|WP_003084290.1|1034985_1036344_-|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP008873.1|WP_016852353.1|1036384_1037137_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGDSIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NZ_CP008873.1|WP_003112937.1|1037415_1038792_+|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP008873.1|WP_003107781.1|1039047_1040109_+|polyamine-ABC-transporter-substrate-binding-protein
MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP008873.1|WP_016852350.1|1040169_1040835_+|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLADEGISGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLSGFISDLNR
>NZ_CP008873.1|WP_003111119.1|1040997_1041876_+|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES

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Crispr_ID: NZ_CP008873_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008873_2

2213367-2213461

Orphan

Consensus_repeat	Method
ACGGTCTGTTCGCTGCCGTTGTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008873_2

>merge|NZ_CP008873|2|2213367-2213461|CRISPRCasFinder
ACGGTCTGTTCGCTGCCGTTGTCGGCCAGGCGGGCTTCGGCCTTGGTCATGTCCTTGTGCAGGCGGTCGACGGTCTGCTCGCTGCCGTTGTCGGC

>NZ_CP008873|2|2|2213367-2213461|CRISPRCasFinder
ACGGTCTGTTCGCTGCCGTTGTCGGC	CAGGCGGGCTTCGGCCTTGGTCATGTCCTTGTGCAGGCGGTCG
ACGGTCTGCTCGCTGCCGTTGTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008873.1\|WP_016852185.1\|2214694_2216764_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP008873.1\|WP_003161310.1\|2211825_2212440_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP008873.1\|WP_003095476.1\|2219893_2221159_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP008873.1\|WP_003095483.1\|2218608_2219148_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP008873.1\|WP_016852186.1\|2212436_2213204_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP008873.1\|WP_003116116.1\|2211148_2211772_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003095496.1\|2216765_2217578_-\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	unknown	unknown	gnl\|CDD\|226231
NZ_CP008873.1\|WP_003095492.1\|2217724_2218132_+\|Rho-termination-factor-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377850
NZ_CP008873.1\|WP_003095526.1\|2203694_2204198_-\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP008873.1\|WP_003121125.1\|2221366_2222230_+\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_CP008873.1\|WP_003095488.1\|2218175_2218520_-\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_CP008873.1\|WP_003095503.1\|2213865_2214399_-\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_CP008873.1\|WP_003095519.1\|2207644_2208961_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP008873.1\|WP_016852188.1\|2205215_2206316_+\|ferredoxin-reductase	unknown	unknown	gnl\|CDD\|99812
NZ_CP008873.1\|WP_003095479.1\|2219302_2219719_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_CP008873.1\|WP_003121124.1\|2222321_2222936_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003095515.1\|2210321_2211011_-\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_CP008873.1\|WP_003099516.1\|2208951_2210343_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP008873.1\|WP_016852187.1\|2206312_2207425_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP008873.1\|WP_003107570.1\|2204427_2205057_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236881

Protein	Function_ID	Function_description	E-value
NZ_CP008873.1\|WP_016852185.1\|2214694_2216764_+\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_CP008873.1\|WP_003161310.1\|2211825_2212440_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	1.20616e-69
NZ_CP008873.1\|WP_003095476.1\|2219893_2221159_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP008873.1\|WP_003095483.1\|2218608_2219148_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	5.52525e-29
NZ_CP008873.1\|WP_016852186.1\|2212436_2213204_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	4.55161e-96
NZ_CP008873.1\|WP_003095496.1\|2216765_2217578_-\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.65802e-48
NZ_CP008873.1\|WP_003095492.1\|2217724_2218132_+\|Rho-termination-factor-N-terminal-domain-containing-protein	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	0.000208897
NZ_CP008873.1\|WP_003095526.1\|2203694_2204198_-\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	2.44267e-58
NZ_CP008873.1\|WP_003121125.1\|2221366_2222230_+\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.3777e-87
NZ_CP008873.1\|WP_003095488.1\|2218175_2218520_-\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	1.90142e-51
NZ_CP008873.1\|WP_003095503.1\|2213865_2214399_-\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	1.01703e-50
NZ_CP008873.1\|WP_003095519.1\|2207644_2208961_+\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.70918e-108
NZ_CP008873.1\|WP_016852188.1\|2205215_2206316_+\|ferredoxin-reductase	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	8.19115e-87
NZ_CP008873.1\|WP_003095479.1\|2219302_2219719_+\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.76735e-18
NZ_CP008873.1\|WP_003095515.1\|2210321_2211011_-\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	2.43467e-112
NZ_CP008873.1\|WP_003099516.1\|2208951_2210343_-\|sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	0
NZ_CP008873.1\|WP_016852187.1\|2206312_2207425_+\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	5.26797e-66
NZ_CP008873.1\|WP_003107570.1\|2204427_2205057_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	4.59942e-41

>NZ_CP008873.1|WP_016852186.1|2212436_2213204_+|molybdopterin-dependent-oxidoreductase
MKGPEKKRAKIAIDPSSERQIVDLQRRLLLRGGLSLGALAMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVASPFPFNAFYPAYNVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTFLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIPTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV
>NZ_CP008873.1|WP_003161310.1|2211825_2212440_+|cytochrome-b/b6-domain-containing-protein
MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGNGLCYLAHGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEPGRYNAVQRLLYWLVLALGALLVLSGLAIWKPVQLHGLTALFGGFQGARWVHFLAMAGVVGFVVVHLLLVLLVPRTLLPMIIGREWRRGRRSEG
>NZ_CP008873.1|WP_003116116.1|2211148_2211772_+|hypothetical-protein
MLRLKASPALFFGLLLASAASFAAQPPAGMLQPLRGTIQQAADDHLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHVFAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDVPIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM
>NZ_CP008873.1|WP_003095515.1|2210321_2211011_-|heavy-metal-response-regulator-transcription-factor
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLQLDVLRRKVSRQGQVIALTNKEFALLHLLMRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
>NZ_CP008873.1|WP_003099516.1|2208951_2210343_-|sensor-histidine-kinase
MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDVMVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVAVNPRHERLPSLRVVAAGQALNPSVVHAALTHDGIPMRVLAAEVLVGGREPLQITAAHLLLGETRMLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAAAPAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSNEEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGLAEERGLSLDVQVSGQLRADPQLFRRALSNLLANAIRYASADSLIEVRGLRRSGEFLLSVENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAPGRIRFDLAFPAQD
>NZ_CP008873.1|WP_003095519.1|2207644_2208961_+|MFS-transporter
MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVGGLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRFITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKPLLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFYGLAPVYANRNGLDASQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLASIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYGVGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAMPDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS
>NZ_CP008873.1|WP_016852187.1|2206312_2207425_+|fatty-acid-desaturase
MNRPASPAMRDDRELTPEQLAAFGAELDALRQRTLADLGADDARYIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDWMNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKPFYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLGRQWTKDYLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETRGHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRYGQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPAGRG
>NZ_CP008873.1|WP_016852188.1|2205215_2206316_+|ferredoxin-reductase
MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLNRHYARVEARYWVADDMLALALRTAPGWPPARPGQHIQLLAKRDGVRVGRSYSLTRVVGERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTPLLGLLREALENGYRGPVLWLHYVRHPGQRAWLGELEALAARHPNLELRWSLTRGARADGCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWRSGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGCVRDLRSGALCSEPGQPIRLCVSAAHGDLALDL
>NZ_CP008873.1|WP_003107570.1|2204427_2205057_-|TetR-family-transcriptional-regulator
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG
>NZ_CP008873.1|WP_003095526.1|2203694_2204198_-|urease-accessory-protein-UreE
MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFAASGEEVGLFLERGQPPLADGDCLEARDGRLVRVVARSERLLHVTCASPLELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRLHQFGVRR
>NZ_CP008873.1|WP_003095503.1|2213865_2214399_-|bacterioferritin
MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTTRRIFEEILAQEEEHADDMADILDDLA
>NZ_CP008873.1|WP_016852185.1|2214694_2216764_+|AsmA-family-protein
MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLALLPLLWQTIRIPQIKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVTVGPAASLLALVAPSKSDDNQCTALLQRMRLPAKVPAGKR
>NZ_CP008873.1|WP_003095496.1|2216765_2217578_-|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR
MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPEQIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLLAELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEIAGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY
>NZ_CP008873.1|WP_003095492.1|2217724_2218132_+|Rho-termination-factor-N-terminal-domain-containing-protein
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
>NZ_CP008873.1|WP_003095488.1|2218175_2218520_-|osmotically-inducible-lipoprotein-OsmE
MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKGMSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDARP
>NZ_CP008873.1|WP_003095483.1|2218608_2219148_-|MOSC-domain-containing-protein
MQQVIAVSLCATHAFSKQVRPAIRLLKGLGVEGDAHHGVTVKHRSRVRQDPTQPNLRQVHLIHEELHDELRASGFAIGPGTMGENITTRGVDLLGLPTGTRLRLGESALVELTGLRNPCSQLDNYQPGLTAAVLGRDEQGNLIRKAGVMAIVLEDGEVRPGDAIDIQLPPLPHRALEKV
>NZ_CP008873.1|WP_003095479.1|2219302_2219719_+|hypothetical-protein
MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK
>NZ_CP008873.1|WP_003095476.1|2219893_2221159_-|Hsp70-family-protein
MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERGIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGGVHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG
>NZ_CP008873.1|WP_003121125.1|2221366_2222230_+|oxaloacetate-decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
>NZ_CP008873.1|WP_003121124.1|2222321_2222936_-|hypothetical-protein
MMGPFRRLAHLIDQGRQLDAALAGDPFALPAPEDRYSVRQLHGLYPRRHPGLYAPLLGSLALLLGAAPLGLAALRLALPEAPLRPLGWLSALPLLAAWLWLIALLSRGASLGPRLARDASLLLVATGLLLRLASGETSGLVALGGGACAWLLFNSRAMQRYMELVYAQRLYRAQSANRPGSAQRRLANQAAYRERKRRERSGRS

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008873_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008873_3

2953364-2953526

Orphan

Consensus_repeat	Method
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008873_3

>merge|NZ_CP008873|3|2953364-2953526|CRISPRCasFinder
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGGTGGATAACGCCCCAGGCGTTATTCGCCGTGAGGCGTCTGAAATGGCGGATAACCGCGTGGCGGTTATTCGCCCTACACCACGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG

>NZ_CP008873|3|3|2953364-2953526|CRISPRCasFinder
GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG	TGGATAACGCCCCAGGCGTTATTCGCCGTGAGGCGTCTGAAATGGCGGATAACCGCGTG
GCGGTTATTCGCCCTACACCACGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008873.1\|WP_003093949.1\|2942258_2942831_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|214870
NZ_CP008873.1\|WP_023118672.1\|2962054_2962273_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003101146.1\|2946783_2947092_+\|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226771
NZ_CP008873.1\|WP_003093930.1\|2953564_2955016_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP008873.1\|WP_003116189.1\|2948580_2950104_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_CP008873.1\|WP_003101143.1\|2945464_2946076_+\|DUF2846-domain-containing-protein	unknown	unknown	gnl\|CDD\|378537
NZ_CP008873.1\|WP_023118671.1\|2958709_2959861_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371324
NZ_CP008873.1\|WP_003455444.1\|2956097_2956904_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274513
NZ_CP008873.1\|WP_003120855.1\|2956997_2957381_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003120863.1\|2942905_2943985_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	unknown	unknown	gnl\|CDD\|224419
NZ_CP008873.1\|WP_003129230.1\|2959857_2962065_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379255
NZ_CP008873.1\|WP_073653404.1\|2947176_2948484_+\|Nramp-family-divalent-metal-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP008873.1\|WP_003120856.1\|2955098_2956013_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|236871
NZ_CP008873.1\|WP_003121473.1\|2958124_2958349_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_031636812.1\|2958422_2958713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003101151.1\|2950381_2951509_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP008873.1\|WP_016852099.1\|2944084_2945371_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP008873.1\|WP_003101155.1\|2952490_2953264_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235852
NZ_CP008873.1\|WP_016852098.1\|2957481_2957838_+\|DUF4124-domain-containing-protein	unknown	unknown	gnl\|CDD\|379230
NZ_CP008873.1\|WP_003120861.1\|2946179_2946764_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153243

Protein	Function_ID	Function_description	E-value
NZ_CP008873.1\|WP_003093949.1\|2942258_2942831_+\|YceI-family-protein	gnl\|CDD\|214870	smart00867, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to polyisoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.58219e-15
NZ_CP008873.1\|WP_003101146.1\|2946783_2947092_+\|ribbon-helix-helix-domain-containing-protein	gnl\|CDD\|226771	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only].	6.44728e-40
NZ_CP008873.1\|WP_003093930.1\|2953564_2955016_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP008873.1\|WP_003116189.1\|2948580_2950104_-\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	1.05118e-147
NZ_CP008873.1\|WP_003101143.1\|2945464_2946076_+\|DUF2846-domain-containing-protein	gnl\|CDD\|378537	pfam11008, DUF2846, Protein of unknown function (DUF2846). Some members in this family of proteins with unknown function are annotated as lipoproteins however this cannot be confirmed.	1.20717e-26
NZ_CP008873.1\|WP_023118671.1\|2958709_2959861_-\|hypothetical-protein	gnl\|CDD\|371324	pfam10983, DUF2793, Protein of unknown function (DUF2793). This is a bacterial family of proteins with unknown function.	1.26034e-05
NZ_CP008873.1\|WP_003455444.1\|2956097_2956904_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	1.96341e-05
NZ_CP008873.1\|WP_003129230.1\|2959857_2962065_-\|hypothetical-protein	gnl\|CDD\|379255	pfam13550, Phage-tail_3, Putative phage tail protein. This putative domain is found in the large gene transfer agent protein. These produce defective phage like particles. This domain is similar to other phage-tail protein families.	4.05237e-07
NZ_CP008873.1\|WP_003120863.1\|2942905_2943985_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	8.25583e-83
NZ_CP008873.1\|WP_073653404.1\|2947176_2948484_+\|Nramp-family-divalent-metal-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0
NZ_CP008873.1\|WP_003120856.1\|2955098_2956013_-\|universal-stress-protein	gnl\|CDD\|236871	PRK11175, PRK11175, universal stress protein UspE; Provisional.	6.18568e-41
NZ_CP008873.1\|WP_003101151.1\|2950381_2951509_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.30352e-61
NZ_CP008873.1\|WP_016852099.1\|2944084_2945371_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	3.3436e-33
NZ_CP008873.1\|WP_003101155.1\|2952490_2953264_+\|enoyl-CoA-hydratase	gnl\|CDD\|235852	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.	2.79206e-90
NZ_CP008873.1\|WP_016852098.1\|2957481_2957838_+\|DUF4124-domain-containing-protein	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	5.5104e-11
NZ_CP008873.1\|WP_003120861.1\|2946179_2946764_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	3.72461e-111

>NZ_CP008873.1|WP_003101155.1|2952490_2953264_+|enoyl-CoA-hydratase
MSELIRVEREAGLLTLRLDRQDKKNALTRAMYSRMAEALLEAQADTAVRVVLITGGDACFTSGNDILDFLEQPPSLRDSPVGRFMSALLEFPKPVIAAVNGPAVGIGTTLLLHCDLVFVGRNARLKMPFVNLGLTPEFGSSLILPRMLGHARAAELLMLGQDFSGEQAAAWGLANAALEDGATVLEHARDAARRFLHLAPSAVVESKRLMKAPFIEELRRVIAEEGDIFSTRLRSPEAIEALSAFMHRRQPDFSRFA
>NZ_CP008873.1|WP_003101151.1|2950381_2951509_+|GGDEF-domain-containing-protein
MRTDKPPLKQRALQKLLLRRFGMAAGTYLLGLVLLWLALLSGFYRAAPTTAAASTTLVVACQLAFLWLFASGRNLRYADPSLTEPQVLVAIAWLTYFLYHVDSLRGTFMVFYVLALLFGVFQLPPRVFARCAALAFIAFSGIYLVEALQQRLELPGRAALQVLVMFIVMVWLSLFASYIQAMRQRMRQRRYALQAHQDTLRGMMRQLEDLVATDELTGLFNRRHFMRMASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGMTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWEVTSA
>NZ_CP008873.1|WP_003116189.1|2948580_2950104_-|fumarate-hydratase
MAVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSMAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMSVDDMINEGVRRAYNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMDPIDIHELKARGPQNRIEELRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPAELEAPSLDAYPEIVWEAGPSARRVDLDKITPEEVQSWKPGETLLLNGKMLTGRDAAHKRMVDMLNKGETLPVDLKGRFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERGPIAIEAIKDNKAVYLMAVGGAAYLVAQAIKKSKVLAFAELGMEAIYEFEVKDMPVTVAVDTNGESVHITGPAVWQKKIAESLAIEVK
>NZ_CP008873.1|WP_073653404.1|2947176_2948484_+|Nramp-family-divalent-metal-transporter
MPTTATAPFCPSAVSHSVAVPADASPLRKLALFIGPGLLVSVGYMDPGNWATAIEAGSRFGYALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVATDLAEVLGAALAFHLLLGVSITTGVVLTAFDTLIVLALQGANFRRLEAIVLGLIATIGACFFVELVLIGPYWPDVAAGLRPSWDTLSSQEPLYLAIGILGATVMPHNLYLHSSVVQTRVSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDAYHLLDPLVGGALASFLFGFALLAAGQSSTFTGTIAGQVVMEGFLRAKIPCWQRRLITRGLALVPALIGVLWLGEAAVGKLLVLSQVVLSLQLPFALWPLIRFSSDRGLMGEFVNPRWVSALAWSLFGLISAANLTLLYFWFG
>NZ_CP008873.1|WP_003101146.1|2946783_2947092_+|ribbon-helix-helix-domain-containing-protein
MCELYVKADPILYESRSRSLRIRGVVTTLRLENQFWDILREIAEGEGLSTNQLITNLYEEVMDYRGEVLNFASFLRVSCTRYLAQRREKVAELSLVGQRAQA
>NZ_CP008873.1|WP_003120861.1|2946179_2946764_+|DJ-1/PfpI-family-protein
MMAAKKILMLVGDYAEDYETMVPFQALQMVGHQVHAVCPDKRAGQSVRTAIHDFEGDQTYSEKPGHNFTLNADFAQARAEDYDALLIPGGRAPEYLRLNEQVLALVRDFDAARKPIAAVCHGAQLLAAAGVLQGRACSAYPACAPEVRLAGGEYVDLPPDQAHVDGHLVTAPAWPAHPAWLARFLEALGTRISH
>NZ_CP008873.1|WP_003101143.1|2945464_2946076_+|DUF2846-domain-containing-protein
MLRSLSLALSIVASLVGCSTPGAFFGAVDGPAFVAHPSADASHATVYLYRPRSQWADEELEAPGIFLNNELIGSLPSNGYLAFEFETGSYKLEMRRPLAGSFWTLFADGPMDFTRIASFMLEARAGSVYYLRYDELNPPPKSEHPAGEGDGPLQLVAADLGAAEIGATHQVQEPMQFAASGYRKRVQRSFWEGVGRALDKIGI
>NZ_CP008873.1|WP_016852099.1|2944084_2945371_+|acyltransferase
MATPDSKERFIGLEWLRFLLGLYVVVYHTLHTYPKEQKFPGLDELTSLGFFATSTFFVLSGFLLAHVYARSGRLRESARSFWTKRLSNLYPLHLFSLLLSILVLLALSHLGIGPELDKATPRFVIYDTNEVLGRTHPELFLHWMSNTELFVNSILQILLLQAWNPYYLTFNAPLWSLSTLMFFYLAFPFVAPRLMRSRHKWKVLALVWLVYLIPPALVVASESYGIPWTGLLHRNPLLRLPEFLGGILAYGLFRGYRDRGMVPGRGLLAALVALVVAAFLVADYLFTQGAKHWYFLLHNGLLLPAQLLLVCLCALPADPKSAFVRHWSPRLGAASLSLFALHVPMFTLFSRSERLIAVPGRCLDDWRACTEAAAALPSSLLYYPLFLVLLVAFCVLFQERGVVPVRKWLVRRLMPAPAPALAKVPRPA
>NZ_CP008873.1|WP_003120863.1|2942905_2943985_+|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein
MLLAIEAAQRSIELELYLVEDGHCAELFLVALLDARRRGVAVRCLFDGFGCLGLGSAWIQRLREAGGELRLYNPLRWKLTGGNLYRDHRKLLLVDGRLGYVGGAGITDEFWEPVSDVSAWREVMVEMDGPVVADWAALFERQWLACLEEKAWKPREGMTLTRLPPQPGAARGLGRVAYADARQHRDILQSLVRALNGSRRRIWLATPYFLPTWKVRRALRKAAQRGVEVRLLLAGRLTDHAPVRYAGQRYYPRLLRAGVRIHEYQPRFLHLKMVMVDDWVSVGSCNFDHWNLRFNLDANLEALDPDFTNEAAASLLADFADSREVTLAMWRARPLWMRLHQRLWGWLDRVVVNFLDRRR
>NZ_CP008873.1|WP_003093949.1|2942258_2942831_+|YceI-family-protein
MHKLICLGLALLALPVQAAWYLDYESSRLSFISTKNATLSEVGRFLVMHGKVDDKGQARLRVELDSVSTDIPLRDERIREHLFETKRFAEAEITAQLDLAPIVELADGVQLEMRQPVTVSLHGKRKSYASDLLVTRLDEHRFQVVTLSPLVLDAADFDLAPGIETLRKLAGAGSIGLSVPVGAVLIFTSR
>NZ_CP008873.1|WP_003093930.1|2953564_2955016_-|pyruvate-kinase
MSVRRTKIVATLGPASNSPEVLEQLILAGIDVARLNFSHGTPDEHRARARLVRELAAKHGRFVALLGDLQGPKIRIAKFANKRIELQVGDKFRFSTSHARDAGTQEVVGIDYPDLVKDCGVGDELLLDDGRVVMVVEEVAADELRCRVLIGGPLSDHKGINRRGGGLTAPALTDKDKADIKLAADMDLDYVAVSFPRDAKDMEYARRLLTEAGGKAWLVAKIERAEAVADDDALDGLIRASDAVMVARGDLGVEIGDAELVGIQKKIILHARRNNKVVITATQMMESMIHSPMPTRAEVSDVANAVLDYTDAVMLSAESAAGEYPVEAVKAMARVCQGAEKHPTSQKSSHRLGQTFDRCDESIALASMYTANHFPGIKAIICLTESGFTPLIMSRIRSSVPIYAYSPHRETQARVAMFRGVETIPFDPAALPAEKVSQAAVDELLKRGVVTKGDWVILTKGDSYTAQGGTNTMKVLHVGDLLV
>NZ_CP008873.1|WP_003120856.1|2955098_2956013_-|universal-stress-protein
MNLHNLLVVVDPSSDEQPALSRAQWIAERSGASVELLLCDFNPALDGGLFFDSHSLQRARDLYLDERVTWLEQLSMPLQQAGIRTQVEAQWGKPLDRMVLQRVGETRPDLVLKSTRKHNLLRRLLLGNSDWQLIRHCPQPLWLVHHDAWRGQRLCAALDPLHASDKPAALDHRLIAAARQLEASLGLRADYLHTHAAMPRSLLFDAEMLAGYERFVLQHEERHRQAFDDLLAAYPEIAAERRHLLAGYAEQAIPDFVRANDIDLLLMGAVARGHLDNALIGQTAERVLEEVECDLLVLKPTNDI
>NZ_CP008873.1|WP_003455444.1|2956097_2956904_-|tetratricopeptide-repeat-protein
MRFARRLVLLPLLSLLAACSPTTPLFVAQVTTGEVAEYKQMKSNRMTAAIEEEGDLLTYSAMAIRDNRSAEAEKLYLTGYDNSRYSAEVRGISLYQIGLIYMSRYNDQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQRAREPVQKSARELLATWKPQQNLDLYKTSLDPDMTLLSRRAVLKDRVDEAAELYLLAVNDPAIPAGIKEKALYQLGLMYLAPDNPHPNRDKAIEYLRRQLLDYPEGELSNKAGRHLDQALNVQPR
>NZ_CP008873.1|WP_003120855.1|2956997_2957381_+|hypothetical-protein
MPMRSLIVACLALSATGCNSWSLNSDLNGAYRAYDKGDCAQVMLDLSRAERRIRARPYLQPEISLLRGQCLERQSLFVDAAQTYHFIIARYPTSEYAYRAKARLETLRQLGRLSETPASASAVPTRL
>NZ_CP008873.1|WP_016852098.1|2957481_2957838_+|DUF4124-domain-containing-protein
MRALWFCVALMPVLAQADIYRWTDAQGKVHFSATPPAGAQRVEVRPQVVERTAAAERAGQRQAALAEECGRLRQQLSQLERGGRFYRQDAGGGPVYLSDAELDAIRRELASRESERCR
>NZ_CP008873.1|WP_003121473.1|2958124_2958349_-|hypothetical-protein
MDEVLRQRLRAELLEVGFLNQCCLDLMESMEAEFSLTKDQRECIEQLSRFLREGIGKLTALSERVADGDIVVLC
>NZ_CP008873.1|WP_031636812.1|2958422_2958713_-|hypothetical-protein
MTMTKRVLLKGEFFAEWSGSLDEAAALAGVPVGDLAFHPDDLLAEVQEQRRQAYRTESDPLRLEAEFDAIAAGTEPDLAAWVAAVQAIKARYPLPE
>NZ_CP008873.1|WP_023118671.1|2958709_2959861_-|hypothetical-protein
MTLYMGPNTGLLINGLPGEGHYNDLIRMWRWDDFLRQPVVKGRVSSLPTGGQAEGDTYIFTGSGANQNRIARWWATGATTPIWEYMPPRLGWRVQVANETTPAGQVKTYEYSGSAWVELVGGMSDAPSDGSNYARNNGAWGKLGTAAGADLNGMPFLNLMPDSGRYAGSINPLILRFTEAFSSSFLTPWNGASIADGGKYIYDNTTNGGTAGNLNQRVQDLLVAMGRSSGSLARYGVEFYTALLTAGPNATTGSTGADGTTRYLQMTNSSRALFIANGWCTAVLWIRTEAGSLHFMPSTAPTTDYKIWLNGASVLPGQVLTPSDGWKHVRISKKSAQGYDNGFPFLYMALGSVAAMACPAFFGGLVDPGIHVAPIATVNSQSA
>NZ_CP008873.1|WP_003129230.1|2959857_2962065_-|hypothetical-protein
MGAKPKAQIVAWRYYFDIHFALGKKVDEVCAIRASGKTAWKGSITSNGQIRINAPELFGGDKGEGGLDGTLDVLFGDEDQGVLPRLAAMLGGLVPAFRGISTCFYSGLVTSVNPYPKKWEILRRGGNRLWDGNPWYPEKQFIWLADGQIKAMNPAHILYLVYTGRDFRGLARTRMDEASWRAAADTLYAEGVGLCFEWTRSDSFKNFCETVKSHIGGEVYPNRQTGQISIRLLRDDYNVADLPLFDEDSGLLEITQEKTSSTSLAPSQLIVKYIDQIDGEQRQVIITNNAVAASQGRRSSEEIEFIGAPTGELAGRFGEREMRLKTAGLKRYKAIFDRRARSLNPGQPFRIRSTRRGIPETVVRVGRIEDNFLGDGKIALTVVQDQFNLPATTGVAPPPPGWIPPDRTPRAVTVRRLIEAPYRELAGVIDPANLQLLDVSASYLAALAEAPTSLSQSYTLTDRVGSSGAFVDRGTGDWCPTGLLAAELPLAAGPSVVTLTNASRLEDVTVGQAAVVDDEIVRVDAVNYVSGTVTLARGCADTVPAKHLAGARVWFYDTFEAVDETVYSQGVTLQARLLTNTSEGQLAPALAATDSLTLTGRQGKPYPPGQFRINGSAYPTKVYGALSVSWAKRDRIGQADQLIDTTVGNIGPEAGATVTLQVYSGTTLKRTYAGLTSSSWSYPLAEDMADGPLQDVRLVLRSVRDGINSWQQHDITIERHGLGFRLGEELGGVAQ
>NZ_CP008873.1|WP_023118672.1|2962054_2962273_-|hypothetical-protein
MIVTVQHLHTVPTWTTRQGYCHGQARAFFKRHGLDWLSFLRNGIDADLLVATGDALALKLVEHARREVAHGR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008873_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008873_4

6302538-6302640

Orphan

Consensus_repeat	Method
GGCGTTATCCGCCGATACCCCGCCGC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP008873_4

>merge|NZ_CP008873|4|6302538-6302640|CRISPRCasFinder
GGCGTTATCCGCCGATACCCCGCCGCAACGGCGGAGCGAAAGCTGGGAACCCTCCGCGTAGGGCGAATAACGCCGGAGGCGTTATCCGCCGATACCCGCCGCG

>NZ_CP008873|4|4|6302538-6302640|CRISPRCasFinder
GGCGTTATCCGCCGATACCCCGCCGC	AACGGCGGAGCGAAAGCTGGGAACCCTCCGCGTAGGGCGAATAACGCCGGA
GGCGTTATCCGCCGATACCCGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008873.1\|WP_003091547.1\|6307091_6307403_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP008873.1\|WP_003116401.1\|6294183_6295083_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP008873.1\|WP_003114812.1\|6298237_6298801_+\|peptidylprolyl-isomerase-A	unknown	unknown	gnl\|CDD\|182824
NZ_CP008873.1\|WP_003114808.1\|6307620_6308478_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270357
NZ_CP008873.1\|WP_003091546.1\|6305439_6307095_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495
NZ_CP008873.1\|WP_023082219.1\|6308771_6308957_+\|DUF2061-domain-containing-protein	unknown	unknown	gnl\|CDD\|225746
NZ_CP008873.1\|WP_003091533.1\|6295975_6296293_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008873.1\|WP_003114810.1\|6302927_6303554_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236391
NZ_CP008873.1\|WP_003114813.1\|6297428_6298256_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP008873.1\|WP_003109184.1\|6298863_6300696_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP008873.1\|WP_003109182.1\|6302660_6302819_-\|DUF3309-domain-containing-protein	unknown	unknown	gnl\|CDD\|378708
NZ_CP008873.1\|WP_016852630.1\|6310495_6311299_+\|VacJ-family-lipoprotein	unknown	unknown	gnl\|CDD\|225409
NZ_CP008873.1\|WP_003116397.1\|6311439_6312297_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP008873.1\|WP_016852631.1\|6309130_6310492_+\|alpha/beta-fold-hydrolase	unknown	unknown	unknown
NZ_CP008873.1\|WP_003109191.1\|6293838_6294174_+\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|182232
NZ_CP008873.1\|WP_003114814.1\|6295187_6295829_-\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|224103
NZ_CP008873.1\|WP_003116398.1\|6303550_6305350_-\|cyclic-nucleotide-binding/CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225457
NZ_CP008873.1\|WP_003091534.1\|6296492_6297422_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP008873.1\|WP_003114811.1\|6301276_6302401_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225688
NZ_CP008873.1\|WP_003091540.1\|6300977_6301244_+\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321

Protein	Function_ID	Function_description	E-value
NZ_CP008873.1\|WP_003091547.1\|6307091_6307403_-\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	2.28294e-48
NZ_CP008873.1\|WP_003116401.1\|6294183_6295083_+\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	1.27099e-12
NZ_CP008873.1\|WP_003114812.1\|6298237_6298801_+\|peptidylprolyl-isomerase-A	gnl\|CDD\|182824	PRK10903, PRK10903, peptidylprolyl isomerase A.	5.29669e-93
NZ_CP008873.1\|WP_003114808.1\|6307620_6308478_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.52249e-117
NZ_CP008873.1\|WP_003091546.1\|6305439_6307095_-\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NZ_CP008873.1\|WP_023082219.1\|6308771_6308957_+\|DUF2061-domain-containing-protein	gnl\|CDD\|225746	COG3205, COG3205, Predicted membrane protein [Function unknown].	1.7036e-27
NZ_CP008873.1\|WP_003114814.1\|6295187_6295829_-\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	1.18979e-103
NZ_CP008873.1\|WP_003114810.1\|6302927_6303554_-\|3'-5'-exonuclease	gnl\|CDD\|236391	PRK09145, PRK09145, 3'-5' exonuclease.	2.00701e-94
NZ_CP008873.1\|WP_003114813.1\|6297428_6298256_+\|alpha/beta-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	9.99012e-42
NZ_CP008873.1\|WP_003109184.1\|6298863_6300696_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.066e-156
NZ_CP008873.1\|WP_003109182.1\|6302660_6302819_-\|DUF3309-domain-containing-protein	gnl\|CDD\|378708	pfam11752, DUF3309, Protein of unknown function (DUF3309). This family is conserved in bacteria but its function is not known.	2.8739e-06
NZ_CP008873.1\|WP_016852630.1\|6310495_6311299_+\|VacJ-family-lipoprotein	gnl\|CDD\|225409	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane].	1.05866e-100
NZ_CP008873.1\|WP_003116397.1\|6311439_6312297_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.4231e-96
NZ_CP008873.1\|WP_003109191.1\|6293838_6294174_+\|tRNA-binding-protein	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	1.70058e-64
NZ_CP008873.1\|WP_003116398.1\|6303550_6305350_-\|cyclic-nucleotide-binding/CBS-domain-containing-protein	gnl\|CDD\|225457	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].	0
NZ_CP008873.1\|WP_003091534.1\|6296492_6297422_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.24343e-39
NZ_CP008873.1\|WP_003114811.1\|6301276_6302401_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225688	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP008873.1\|WP_003091540.1\|6300977_6301244_+\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	1.53651e-35

>NZ_CP008873.1|WP_003114811.1|6301276_6302401_-|GNAT-family-N-acetyltransferase
MPIQTLATLADIDAAEWDALLPPAQPFLRHAFLSALEDSHSVTPATGWRPAHRVLRDPQGRLCAALPAYVKAHSYGEYVFDWSWADACQRAGIRYYPKLLVGVPFTPVAGARLLGEDEGLQGLLASLGEEAEASGLSSIHVNFTDARADTLLAARDGWLERLGCQYHWHNRGYRDFQDFLEALSSRKRKQLRKEREQVGGQGIEFEWREGGQLSELEWDFVYLCYANTYLVRDRDPYLSREFFGLLAERMPEAIRVVFAHQRGKPVAMAFSLVAGDTLYGRYWGCLAEFDRLHFETCFYQGLEFAIGAGLARFDAGAQGEHKLIRGFEPVLTRSWHYLAHPGLRDAVAQFLEQERAGVRAYAEEAHGLLPYRQA
>NZ_CP008873.1|WP_003091540.1|6300977_6301244_+|DUF2790-domain-containing-protein
MKLASVVSAVITSLAPMAFAQDVDKDPGRGLPVEEYHYGMQLDVKNVLHRTDNSTRTGVVPVTVVYEDHSGELHKIRFLEWGGSTSNG
>NZ_CP008873.1|WP_003109184.1|6298863_6300696_+|ABC-transporter-ATP-binding-protein
MLYRRFERLIDPFRSASERMPPSEVLRFYVYFLRQVWPVFLALLVVGLIVALIEVALFSYLGRIVDLAQSTPSAEFFRVHANELIWMAVVALVLRPLFNALHDMLVHQSINPSMTNLIRWQNHRYVLKQSLGFFQNDFAGRIAQRIMQTGNSLRDSAVQVVDALWHVLIYTVSALVLFAEADWRLMIPLVLWVFAYVGALAYFVPQVKRRSVEASDSRSKLMGRIVDGYTNITTLKLFAHTRQEEDYAREAIGDQTLKSQRAGRVVTSMDVTITVMNGVLITGTTGLALWLWSQELISVGAIALATGLVIRINNMSGWIMWVVGGIFENIGQVQDGMQTIALPRKVVDREDAQPLRVERGEVEFEHIAFHYGKGSGVIQGLDLKVRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRILVDGQDIAGVTQESLRAQIGMVTQDTSLLHRSIRDNLLYGRPGASDAELMEAVRKARADEFIPLLSDAEGRRGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVESAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGHIAESGTHAELLAHGGLYARLWQHQTGGFVGVD
>NZ_CP008873.1|WP_003114812.1|6298237_6298801_+|peptidylprolyl-isomerase-A
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQEKKTRAPIKNEADNGLLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
>NZ_CP008873.1|WP_003114813.1|6297428_6298256_+|alpha/beta-hydrolase
MPDFQHRDCTLVYDDHPGPTERAPVLLLHGLGSSARDWEYQLPALLGRYRLLVPDLRGHGRSGKPRGGYSMAGFAEDCAALLDRLGCGPVHLVGISMGGMIGFQLACDRPDLLRSLTIVNSTPEVIPRKPREHLEVAKRKLLSRLLSLRTIGRALGRLLFPKAEQAGLREKIEARWAENDKRAYLASLDAIIGWGVQERLAEIACPTLVISADRDYTPVSLKQAYCERIADARLVVVEDSRHATPMDQPEIFNTTLLGFLADIDKTKEQPCSNVS
>NZ_CP008873.1|WP_003091534.1|6296492_6297422_+|LysR-family-transcriptional-regulator
MKAPRVTLDQWRTLQAVVDHGGFAQAAEALHRSQSSISYTVARMQEQLGVPLLRIDGRKAVLTEAGEVLLRRSRQLVKQAGQLEELAHHMEQGWEPEVRLVVDAAYPTARIVRSLSAFMPQSRGCRVLLREEVLSGVEEALIQGAADLAISGLIIPGHLGADLSVVEFVAVAHPDHPLHRLQRELTHQDLETQMQVVIRDSGRLQPRDHGWLGAEQRWTVGSLATAATFVGNGLGFAWLPRHIIERELQSGQLKPLPLSQGGVRQSRFYLYTNKEKPLGPASQILMEMLKSFANVPLNAPFAAPEPAAE
>NZ_CP008873.1|WP_003091533.1|6295975_6296293_-|hypothetical-protein
MKRLCCFALSLLPLSAFAYPIEVDPQLNGTEVSYSTQDIGRDMGAILLTNLGGQAAECTAVFRNGPETPKVRKGVIQPGQNSNFTAQFGRDIIKLRIKLTCKIAK
>NZ_CP008873.1|WP_003114814.1|6295187_6295829_-|FMN-dependent-NADH-azoreductase
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
>NZ_CP008873.1|WP_003116401.1|6294183_6295083_+|DMT-family-transporter
MNRRSALAALHGGALLFGLTGVFGKLASASPGVIVFGRALFAVLALGLFARLAGQAWRALGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHLAEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVGPVQAALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRKTAVGDERGDPERA
>NZ_CP008873.1|WP_003109191.1|6293838_6294174_+|tRNA-binding-protein
MDIIEWQDFERVELRVGTILSAAPNPKARKPAYVLEVDLGPLGLRTSSAQLTAHYQAEQLVGRQVLCVCNFAPKQIAGVRSEVLVTGVYDSEDKVVLAGFDKPLPNGARLA
>NZ_CP008873.1|WP_003109182.1|6302660_6302819_-|DUF3309-domain-containing-protein
MSLGTILLIILILLLIGGLPVFPHSRNWGYGPSGIIGALLVVLLVLLLLGMI
>NZ_CP008873.1|WP_003114810.1|6302927_6303554_-|3'-5'-exonuclease
MNTMVKLPDSRWPGWRRRLYWWMHEAVEAEEVISLDLETTSLDPRRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAESIRIHKLRRADLEGQLQLEQALRQVLAFIGDRPLLGYYLSFDVAVLNRHLRQLLDRQLHNPSIEISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGDAQAVALMFMRLLKGPAPKVIH
>NZ_CP008873.1|WP_003116398.1|6303550_6305350_-|cyclic-nucleotide-binding/CBS-domain-containing-protein
MPDSFNFASPPFDQLRPHQRETLKQALSVGYYAPGETLLEAGSAVPGLFVLLKGVVEERGDDGRVFAQYAADDLFDVRGLFSGSSKHRYLAIEESIVYELPASCFHQLCGENPGFARFFQADLAAKRQLAQRDGQNLAEFILTRIAREHLLPALEVEASLSLGDAARLQLSHGADALLVRLERDGPELGIVTRTDLMSAHFRDGRSELEAIGPLAHGPLASVELGDFLFDAMILMTRQRIERVAVTEDGQVIGLLHLTQVLSLFSTHSHVLALRIARADDLGDLRRCAETLDTLIATLAGNGIRLRFIMQLVSALNEQLLERLFELLLPPTLRGRCCLLVMGSEGRGEQLLKTDQDNALVLADDLPQEQALAMMQRFSAALLEFGYPPCPGGVMASRPEWCKPLAAWQAELRGTLLEGKPEQLLRLSILADAWPVAGNLQLFEPLRRQLRGFADGGERWLADIAAAALQFDTPLTFLGQLKTQDARLDLKRGGIFPIVHGIRTLALREGLETRGTLARIEALKRHKVLEARLADDLSESFELFLQLRLTRQLAGQRDGRQQGLDVSGMSRHDRDMLRYGLHVVKKFKQSVARQFHLETR
>NZ_CP008873.1|WP_003091546.1|6305439_6307095_-|cation-acetate-symporter
MIARLLAALGLAAFAPALWADALTGDVQRQPLNVSAIVMFVAFVGATLCITYWASKRNRSAADYYAAGGRITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKQIRTLSACGSLVVVAFYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLSGASFMAIMVLKHVNFDVSTLFSEAIKVHPKGEAIMSPGGLVKDPISAFSLGFALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTNPDFKDATGALIGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVFKGGKANEKDELRVSKMTTVALGVVAIVLGILFEKQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWMGLITAVGLMVLGPTIWVQILGHEKAIYPYEYPALFSMIVAFVGIWFFSITDKSAAADEERARFFPQFIRSQTGLGASGAVAH
>NZ_CP008873.1|WP_003091547.1|6307091_6307403_-|DUF485-domain-containing-protein
MNDSIYQRIDTNPRFKELVAKRERFAWILSSIMLGLYVIFILLIAFQPQLLGARISPDSSVTWGIPMGVGLILAAFILTGLYVRRANGEFDSLNQEILKEAQQ
>NZ_CP008873.1|WP_003114808.1|6307620_6308478_-|glycine-betaine-ABC-transporter-substrate-binding-protein
MRMMRRLLCWSAGLAMSAAVGMAAAADKPVITIGYVDGWSDSVATTHVAAEVIREKLGYEVKLMPVAAGIMWQGVARGKLDAMLSAWLPGTHGAYYEKMKDKVVNLAINYPDARIGLIVPEYVSANSIADLQAQKDAFGGRVVGIDAGAGVMIKTDEAIKQYGLDYKLVASSGSGMIAELTRAENEKKPVVVTGWIPHWMFAKWKLKFLDDPKKVYGDTEHVDTVANPALEAKAKPVWEFLKKFGWKDGNEVGQVMLAIQEGAKPEDAAKQWVAANPGRVKDWVQ
>NZ_CP008873.1|WP_023082219.1|6308771_6308957_+|DUF2061-domain-containing-protein
MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFEKDGAPG
>NZ_CP008873.1|WP_016852631.1|6309130_6310492_+|alpha/beta-fold-hydrolase
MPHFLRFAALLGGLALGCANLAQARDVDAASYGYPLTNPFEATIATTPPELRPELPHSEDIDQKDYSLKLRPEREFALPDNFWPVKKLRYRLARQDHAAPLIFIIAGTGAHYASSFPEYLKKLFYQAGYHVVQLSSPTSWDFMASASRFATPGFSSDDADDLYRVMQAVRAQQRDLPVTDYYLTGYSLGALNAAFVSHLDESRRSFNFKKVLLLNPPVNLYTSVSNLDKLVETQVKGITDSRTFYEVVLSKLTRYFRQKGYVDINDAMLYDFQQSKQRLSNEEMAMLIGTSFRFSAADIAFTSDLVNRRGLITPPNYPINEGTSLEPFFKRALQCDFECYMTEQLIPMWRARYDGGSLTQLVNQVSLYKLQDYLHDSPKIAVMHNADDVILGPGDLGFLRRTFGERLTVYPYGGHCGNLNYKVNAQDMLDFFATPAAGQTKVASAALTQQAGN
>NZ_CP008873.1|WP_016852630.1|6310495_6311299_+|VacJ-family-lipoprotein
MSRTAHWMFALLLSAAASAQADEAAAPAELPPRQLDGDGFSRPLDQLKFNPGLDQREFERATLDALNMYDPWESWNRRVYHFNYRFDEWVFLPVVRGYEYVTPHFVRSGVSNFFDNLGDVPNLLNNLAQLKGKAAMETTARLLFNTTFGVLGLWDPATRMGLHKRSEDFGQTLGLYGVGSGPYLVLPILGPSNLRDTGGLVVDYVGEYQVNYLNVPQASGDHPEITALRVVDKRYNTSFRYGQMNSPFEYEKLRYIYTEARKLQIAE
>NZ_CP008873.1|WP_003116397.1|6311439_6312297_+|pirin-family-protein
MTRYRDVLELHTGHPASDGAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRHEDHLGNRGLLKPGGVQWMTAAHGIIHSEMPEQVEGAMRGFQLWVNLPAKNKLAPAGYRDIEPEDVPRLETAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPHYYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERPVEIATNRLARLSEEGELSLRSEAGARVLVLAGKPLREPIVQYGPFVMNSREEIEQALRDYRDGVLAV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008873_4	4.1\|6302564\|51\|NZ_CP008873\|CRISPRCasFinder	6302564-6302614	51	NZ_CP042268	Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence	63791-63841	0	1.0

1. spacer 4.1|6302564|51|NZ_CP008873|CRISPRCasFinder matches to NZ_CP042268 (Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence) position: , mismatch: 0, identity: 1.0

aacggcggagcgaaagctgggaaccctccgcgtagggcgaataacgccgga	CRISPR spacer
aacggcggagcgaaagctgggaaccctccgcgtagggcgaataacgccgga	Protospacer
***************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

663487 : 697966

Pseudomonas_phage(27.27%)

tail,plate,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003101660.1\|663487_664687_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_003161907.1\|664971_666315_+	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	2.3e-18	44.1
WP_016852420.1\|666317_667409_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003085254.1\|667462_667813_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
WP_003120826.1\|667890_668313_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_016852419.1\|668313_669033_-	hypothetical protein	NA	NA	NA	NA
WP_003085247.1\|669032_670067_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003113170.1\|670357_670780_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_003117983.1\|670796_671765_+	nitronate monooxygenase	NA	NA	NA	NA
WP_016852418.1\|671886_672963_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003142814.1\|673023_673824_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_023118235.1\|673863_675345_-	AAA family ATPase	U5XJW0	Phormidium_phage	7.9e-68	33.7
WP_003085225.1\|675423_675762_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003085224.1\|675861_676509_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003101641.1\|676563_677358_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_003085219.1\|677677_678100_-	OsmC family protein	NA	NA	NA	NA
WP_003085214.1\|678371_679016_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_003085205.1\|679077_679914_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9
WP_003085203.1\|679910_680960_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003118919.1\|681913_682171_-	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003121852.1\|682167_682530_-	hypothetical protein	H2BDA0	Pseudomonas_phage	4.2e-15	47.9
WP_003113192.1\|682526_683156_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.6e-86	78.0
WP_003113193.1\|683188_684178_-	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.5e-107	55.8
WP_003101635.1\|684235_684442_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_003113194.1\|684416_685289_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.5e-74	51.4
WP_019416282.1\|685298_687536_-\|tail	phage tail length tape measure protein	NA	NA	NA	NA
WP_003085178.1\|687705_688050_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_016852416.1\|688064_688568_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.8e-64	72.8
WP_003121848.1\|688580_689741_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_016852415.1\|689783_690224_-	hypothetical protein	NA	NA	NA	NA
WP_003161927.1\|690231_692337_-\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	3.0e-222	52.7
WP_003118911.1\|692338_692872_-\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	3.9e-62	64.6
WP_003161928.1\|692864_693752_-	bacteriophage protein	S4TNY7	Salmonella_phage	4.1e-88	59.8
WP_003085143.1\|693748_694075_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_016852413.1\|694227_694785_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.3e-44	70.3
WP_003101620.1\|694781_695297_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-32	43.4
WP_003118908.1\|695318_695768_-	hypothetical protein	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003459419.1\|696130_696490_-	hypothetical protein	NA	NA	NA	NA
WP_003085132.1\|696537_696738_-	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003113202.1\|697195_697966_+	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.4e-71	59.1

DBSCAN-SWA_2

1965769 : 2026122

Erwinia_phage(12.5%)

protease,transposase,integrase,tRNA

attL 1966724:1966739|attR 2022590:2022605

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003095854.1\|1965769_1967113_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	1.4e-44	29.4
1966724:1966739	attL	NA	NA	NA	NA
WP_003095852.1\|1967141_1967675_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_003095850.1\|1967793_1968489_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_003110892.1\|1968523_1970287_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.1e-84	34.2
WP_003103282.1\|1970536_1972756_-	primosomal protein N'	NA	NA	NA	NA
WP_003095846.1\|1972931_1973147_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_003103280.1\|1973206_1973974_+	thermonuclease family protein	A0A2P1JU10	Anoxybacillus_phage	3.7e-05	31.1
WP_003095844.1\|1973970_1975410_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_003103278.1\|1975512_1976781_+	malic enzyme	NA	NA	NA	NA
WP_003095841.1\|1976885_1979357_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_003110888.1\|1979541_1980606_+	pilus assembly protein PilM	NA	NA	NA	NA
WP_003095839.1\|1980605_1981202_+	type 4a pilus biogenesis protein PilN	NA	NA	NA	NA
WP_003103268.1\|1981198_1981822_+	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA
WP_003095836.1\|1981818_1982343_+	type 4a pilus biogenesis lipoprotein PilP	NA	NA	NA	NA
WP_003103267.1\|1982396_1984541_+	type 4a pilus secretin PilQ	R9TEZ5	Vibrio_phage	9.8e-19	24.7
WP_003095833.1\|1984552_1985071_+	shikimate kinase AroK	NA	NA	NA	NA
WP_003107839.1\|1985120_1986227_+	3-dehydroquinate synthase	NA	NA	NA	NA
WP_003116139.1\|1986233_1987883_+	AAA family ATPase	NA	NA	NA	NA
WP_003103700.1\|1988107_1992553_+	glutamate synthase large subunit	NA	NA	NA	NA
WP_003095829.1\|1992581_1994015_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003103698.1\|1994191_1995259_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_003103696.1\|1995380_1996361_-	hypothetical protein	NA	NA	NA	NA
WP_003146385.1\|1996434_1997508_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_016852212.1\|1997619_1998549_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003103690.1\|1998576_1999893_-	MFS transporter	NA	NA	NA	NA
WP_016852210.1\|2001063_2001831_+	ParA family protein	NA	NA	NA	NA
WP_003161256.1\|2001852_2002668_-	universal stress protein	NA	NA	NA	NA
WP_003116142.1\|2002780_2003233_-	YiiD C-terminal domain-containing protein	NA	NA	NA	NA
WP_003116143.1\|2003323_2004601_-	bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	1.1e-17	27.8
WP_003103681.1\|2004721_2005696_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003135708.1\|2005846_2007307_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	3.5e-60	34.3
WP_003106479.1\|2012854_2014657_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003095790.1\|2014958_2015795_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_003246636.1\|2016332_2017454_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_174217331.1\|2017845_2019507_+	hypothetical protein	NA	NA	NA	NA
WP_023118217.1\|2019499_2021371_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_071535013.1\|2021390_2021834_+	hypothetical protein	NA	NA	NA	NA
WP_011911882.1\|2022548_2024054_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.9e-152	55.1
2022590:2022605	attR	NA	NA	NA	NA
WP_085990595.1\|2024971_2026122_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.9e-101	65.6

DBSCAN-SWA_3

2458003 : 2506285

uncultured_Mediterranean_phage(30.0%)

coat,integrase,tRNA

attL 2474095:2474111|attR 2483016:2483032

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016852152.1\|2458003_2459005_+\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	2.9e-74	46.5
WP_123789187.1\|2458985_2459396_-	hypothetical protein	NA	NA	NA	NA
WP_016852151.1\|2460978_2461842_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
WP_003161383.1\|2462009_2462777_-	HNH endonuclease	NA	NA	NA	NA
WP_016852149.1\|2462826_2464470_-	hypothetical protein	NA	NA	NA	NA
WP_003161385.1\|2464759_2469232_-	N-6 DNA methylase	A0A1B1IUC6	uncultured_Mediterranean_phage	5.7e-37	23.7
WP_003161386.1\|2469256_2472040_-	DEAD/DEAH box helicase	A0A1B1IUI1	uncultured_Mediterranean_phage	2.2e-39	26.7
WP_003161387.1\|2472046_2477320_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	8.7e-61	22.9
2474095:2474111	attL	NA	NA	NA	NA
WP_003161388.1\|2477329_2478430_-	Fic family protein	NA	NA	NA	NA
WP_003161389.1\|2478691_2479903_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	1.1e-56	34.4
WP_003099270.1\|2480107_2481208_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003099278.1\|2481248_2481833_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003099279.1\|2481874_2482489_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_003099281.1\|2482605_2483547_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	4.1e-46	35.4
2483016:2483032	attR	NA	NA	NA	NA
WP_003099284.1\|2483713_2484562_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_016852148.1\|2484563_2485181_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_016852147.1\|2485185_2486958_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003095001.1\|2487101_2488370_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003099290.1\|2488387_2489470_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	5.6e-07	48.3
WP_003099293.1\|2489471_2490302_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003099296.1\|2490295_2491054_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_003099300.1\|2491043_2491841_+	glutamate racemase	NA	NA	NA	NA
WP_003099307.1\|2491974_2492496_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.4e-59	69.8
WP_003121048.1\|2492621_2494067_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	1.8e-45	27.8
WP_003094990.1\|2494063_2494963_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	8.5e-17	39.1
WP_003099314.1\|2494972_2495929_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_003099318.1\|2496081_2497065_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_016852145.1\|2497478_2498396_+	TIGR01777 family protein	NA	NA	NA	NA
WP_003099324.1\|2498392_2499415_+	ferrochelatase	NA	NA	NA	NA
WP_003099328.1\|2499694_2501068_+	MFS transporter	NA	NA	NA	NA
WP_003099330.1\|2501069_2502017_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_016852144.1\|2502013_2504386_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_003121045.1\|2504402_2505191_-	molecular chaperone	NA	NA	NA	NA
WP_016852143.1\|2505209_2505752_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003135089.1\|2505751_2506285_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_4

2958124 : 2996833

Pseudomonas_phage(98.04%)

protease,transposase,head,integrase

attL 2955328:2955344|attR 2990409:2990425

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2955328:2955344	attL	NA	NA	NA	NA
WP_003121473.1\|2958124_2958349_-	hypothetical protein	A0A125RNE4	Pseudomonas_phage	5.5e-34	100.0
WP_031636812.1\|2958422_2958713_-	hypothetical protein	H6V8R3	Pseudomonas_phage	1.5e-44	97.9
WP_023118671.1\|2958709_2959861_-	hypothetical protein	A0A0U5DWP6	unidentified_phage	3.4e-220	95.0
WP_003129230.1\|2959857_2962065_-	hypothetical protein	I6PCB1	Pseudomonas_phage	0.0e+00	97.8
WP_023118672.1\|2962054_2962273_-	hypothetical protein	I6P9E8	Pseudomonas_phage	2.7e-33	90.3
WP_003126844.1\|2962269_2962509_-	hypothetical protein	I6P9F0	Pseudomonas_phage	4.4e-37	98.7
WP_023118673.1\|2962517_2963339_-	phage BR0599 family protein	I6PBD5	Pseudomonas_phage	3.6e-155	98.8
WP_003126820.1\|2965030_2965954_-	hypothetical protein	A0A0A1IX02	Pseudomonas_phage	1.0e-182	98.4
WP_003129232.1\|2965955_2966912_-	hypothetical protein	J9RWH1	Pseudomonas_phage	2.6e-189	98.4
WP_031655896.1\|2966919_2970543_-	tape measure protein	J9SH65	Pseudomonas_phage	0.0e+00	97.3
WP_052156158.1\|2970659_2970842_+	hypothetical protein	J9SNJ6	Pseudomonas_phage	7.7e-26	96.7
WP_023118676.1\|2970796_2971279_-	hypothetical protein	J9STT8	Pseudomonas_phage	1.3e-80	97.5
WP_010791812.1\|2971281_2972022_-	hypothetical protein	J9SVZ4	Pseudomonas_phage	1.2e-136	100.0
WP_003127509.1\|2972028_2972232_-	hypothetical protein	J9RWG5	Pseudomonas_phage	1.7e-29	100.0
WP_003127511.1\|2972228_2972681_-	hypothetical protein	J9SH57	Pseudomonas_phage	5.5e-81	100.0
WP_003121492.1\|2972677_2973193_-	DUF1320 domain-containing protein	J9SNI4	Pseudomonas_phage	3.5e-92	100.0
WP_173655838.1\|2973195_2973630_-	hypothetical protein	J9STT1	Pseudomonas_phage	5.0e-47	95.1
WP_003127513.1\|2973642_2974539_-\|head	Mu-like prophage major head subunit gpT family protein	J9SVY7	Pseudomonas_phage	1.3e-171	100.0
WP_003121593.1\|2974553_2974958_-	hypothetical protein	J9RWG0	Pseudomonas_phage	1.8e-67	100.0
WP_023118678.1\|2974963_2976073_-\|protease	phage protease	J9SH47	Pseudomonas_phage	5.8e-201	99.2
WP_023081739.1\|2976283_2976859_-	phage virion morphogenesis protein	J9SNH3	Pseudomonas_phage	1.2e-104	100.0
WP_023081740.1\|2976860_2978099_-	hypothetical protein	J9STS2	Pseudomonas_phage	3.1e-243	100.0
WP_023118679.1\|2978088_2979663_-	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	2.9e-286	95.6
WP_023118680.1\|2979656_2981330_-	hypothetical protein	J9RWF2	Pseudomonas_phage	0.0e+00	99.3
WP_003121466.1\|2981331_2981880_-	DUF3486 family protein	J9SH37	Pseudomonas_phage	6.4e-76	98.9
WP_003121465.1\|2981882_2982185_-	hypothetical protein	J9SNG3	Pseudomonas_phage	4.1e-48	99.0
WP_003117315.1\|2982181_2982502_-	DUF2730 family protein	J9STR5	Pseudomonas_phage	5.1e-49	100.0
WP_015649412.1\|2982501_2983125_-	hypothetical protein	J9SVX5	Pseudomonas_phage	3.6e-99	90.3
WP_016852445.1\|2983326_2983956_-	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	1.9e-119	98.6
WP_003094227.1\|2983952_2984111_-	hypothetical protein	J9SNF4	Pseudomonas_phage	3.4e-22	100.0
WP_003094225.1\|2984113_2984371_-	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_157783244.1\|2985081_2985342_-	hypothetical protein	J9SH16	Pseudomonas_phage	1.8e-12	82.6
WP_003142304.1\|2985526_2985757_+	DNA-binding protein	J9RW65	Pseudomonas_phage	2.5e-37	100.0
WP_015649394.1\|2986041_2986266_-	hypothetical protein	NA	NA	NA	NA
WP_010791820.1\|2986389_2986878_+	hypothetical protein	J9SNL8	Pseudomonas_phage	2.8e-91	99.4
WP_003142306.1\|2986870_2987131_+	hypothetical protein	J9RWD0	Pseudomonas_phage	1.5e-38	95.3
WP_003142307.1\|2987127_2987442_+	hypothetical protein	J9SUN0	Pseudomonas_phage	2.9e-49	98.1
WP_023101705.1\|2987451_2988426_+	hypothetical protein	J9RW58	Pseudomonas_phage	8.9e-153	97.8
WP_016852442.1\|2988429_2990214_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	98.5
WP_016852441.1\|2990213_2991380_+	AAA family ATPase	J9SVV1	Pseudomonas_phage	1.0e-216	100.0
2990409:2990425	attR	NA	NA	NA	NA
WP_016852440.1\|2991381_2991723_+	hypothetical protein	J9RWC3	Pseudomonas_phage	3.5e-56	99.1
WP_014603990.1\|2991719_2992004_+	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_016852439.1\|2992003_2992684_+	hypothetical protein	J9SNC1	Pseudomonas_phage	2.4e-128	98.7
WP_016852438.1\|2992673_2993207_+	hypothetical protein	J9STN6	Pseudomonas_phage	3.3e-93	98.9
WP_016852437.1\|2993199_2993400_+	hypothetical protein	J9SVU3	Pseudomonas_phage	6.7e-31	97.0
WP_016852436.1\|2993392_2994016_+	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	1.3e-109	99.5
WP_016852435.1\|2994017_2994707_+	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	4.2e-125	98.7
WP_016852434.1\|2994708_2994900_+	hypothetical protein	J9RW45	Pseudomonas_phage	5.0e-28	100.0
WP_016852433.1\|2994899_2995367_+	hypothetical protein	J9STM8	Pseudomonas_phage	8.5e-77	100.0
WP_059316985.1\|2995353_2995920_+	regulatory protein GemA	J9SVT5	Pseudomonas_phage	6.0e-101	98.9
WP_003117363.1\|2995919_2996468_+	hypothetical protein	J9RWB3	Pseudomonas_phage	2.1e-98	100.0
WP_003127781.1\|2996464_2996833_+	hypothetical protein	J9SGX4	Pseudomonas_phage	1.1e-63	100.0

DBSCAN-SWA_5

3097893 : 3151804

Pseudomonas_phage(41.67%)

protease,transposase,integrase

attL 3078346:3078364|attR 3148657:3148675

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3078346:3078364	attL	NA	NA	NA	NA
WP_016852073.1\|3097893_3098496_+\|transposase	transposase	NA	NA	NA	NA
WP_003098453.1\|3098658_3100293_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_003112717.1\|3100316_3102164_+	DUF2341 domain-containing protein	NA	NA	NA	NA
WP_003085366.1\|3102174_3102594_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_003098450.1\|3102602_3103349_+	energy transducer TonB	NA	NA	NA	NA
WP_016852072.1\|3103416_3105123_+	putative porin	NA	NA	NA	NA
WP_003085372.1\|3105157_3105820_+	hypothetical protein	NA	NA	NA	NA
WP_003098446.1\|3105848_3106328_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_016852071.1\|3106332_3107277_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_003110838.1\|3107276_3107702_+	hypothetical protein	NA	NA	NA	NA
WP_003141134.1\|3107711_3108698_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003116524.1\|3108769_3109435_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003085391.1\|3109417_3110323_-	sterol desaturase family protein	NA	NA	NA	NA
WP_003123056.1\|3110401_3111718_-	MFS transporter	NA	NA	NA	NA
WP_003116523.1\|3111788_3113183_-	amidase	NA	NA	NA	NA
WP_003163351.1\|3113310_3114210_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	6.3e-12	40.8
WP_016852070.1\|3114464_3115103_-	type B chloramphenicol O-acetyltransferase	M1HS53	Paramecium_bursaria_Chlorella_virus	2.4e-13	32.4
WP_003123052.1\|3116258_3117113_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003120798.1\|3117228_3117525_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003098430.1\|3117569_3117965_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_003123051.1\|3118008_3118515_-	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	5.5e-13	33.7
WP_003085431.1\|3118574_3118832_-	YjhX family toxin	NA	NA	NA	NA
WP_023082823.1\|3119171_3119465_+	DUF2845 domain-containing protein	NA	NA	NA	NA
WP_017002461.1\|3119869_3120172_+	hypothetical protein	NA	NA	NA	NA
WP_023082822.1\|3120607_3122122_-	hypothetical protein	NA	NA	NA	NA
WP_023082821.1\|3122441_3123134_-	hypothetical protein	NA	NA	NA	NA
WP_071534339.1\|3123188_3123461_-	DNA-binding protein	NA	NA	NA	NA
WP_016852068.1\|3123573_3123789_+	hypothetical protein	NA	NA	NA	NA
WP_003125073.1\|3124960_3125395_+	hypothetical protein	Q56VP5	Pseudomonas_phage	3.0e-60	86.8
WP_003124954.1\|3125515_3125767_+	hypothetical protein	NA	NA	NA	NA
WP_003163345.1\|3125780_3125999_+	hypothetical protein	NA	NA	NA	NA
WP_014603242.1\|3126654_3127260_+	hypothetical protein	NA	NA	NA	NA
WP_003159569.1\|3127269_3127620_+	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	5.5e-20	41.1
WP_023093179.1\|3127621_3128884_+	hypothetical protein	Q56VN9	Pseudomonas_phage	1.3e-116	55.2
WP_003115206.1\|3129142_3130435_+	hypothetical protein	Q56VN8	Pseudomonas_phage	2.8e-247	94.2
WP_016852062.1\|3130434_3131418_+\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	6.8e-92	52.3
WP_003114155.1\|3131631_3131883_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_003123043.1\|3131892_3132240_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_003141085.1\|3132549_3133458_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_077446928.1\|3133620_3134721_-	cation transporter	NA	NA	NA	NA
WP_010791743.1\|3134776_3135196_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003121550.1\|3136831_3137164_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_006217728.1\|3137160_3137556_-\|transposase	transposase	NA	NA	NA	NA
WP_023093178.1\|3137752_3138904_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_023093177.1\|3138928_3139894_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_023093176.1\|3139871_3140372_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_031656219.1\|3140555_3143363_-	GGDEF and EAL domain-containing protein	G3MA91	Bacillus_virus	2.3e-28	38.7
WP_023093173.1\|3143517_3143958_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.4e-10	36.8
WP_023093172.1\|3143954_3145838_-\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	5.1e-104	40.9
WP_023093170.1\|3147312_3150162_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	3.1e-129	41.1
3148657:3148675	attR	NA	NA	NA	NA
WP_008906266.1\|3150255_3150825_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_031642515.1\|3150860_3151142_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023093169.1\|3151426_3151804_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

5157745 : 5196208

Enterobacteria_phage(33.33%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023082413.1\|5157745_5159077_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_016852876.1\|5159136_5159613_-	hypothetical protein	NA	NA	NA	NA
WP_016852875.1\|5159821_5160367_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003089494.1\|5160389_5161874_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003089495.1\|5161947_5162445_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003450950.1\|5162457_5162883_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003104926.1\|5162866_5164660_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_016852874.1\|5164623_5165640_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_016852873.1\|5165641_5168191_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.5e-77	29.4
WP_003122693.1\|5168212_5168785_+	hypothetical protein	NA	NA	NA	NA
WP_003104930.1\|5168944_5169133_+	hypothetical protein	NA	NA	NA	NA
WP_003114515.1\|5169132_5171139_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.7e-42	29.5
WP_003104933.1\|5171149_5171686_+	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_003089513.1\|5171708_5172104_-	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_003110901.1\|5172380_5173022_+	response regulator transcription factor	NA	NA	NA	NA
WP_023082412.1\|5173222_5174428_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003114512.1\|5174844_5177160_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_003089521.1\|5177156_5177627_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_003104944.1\|5177891_5178128_-	hypothetical protein	NA	NA	NA	NA
WP_003089526.1\|5178422_5178665_+	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003104946.1\|5178741_5179893_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003124571.1\|5179989_5180910_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003089535.1\|5180951_5181275_-	transcriptional repressor	NA	NA	NA	NA
WP_016852871.1\|5181455_5183744_-	acylase	NA	NA	NA	NA
WP_016852870.1\|5183866_5185198_-	SidA/IucD/PvdA family monooxygenase	NA	NA	NA	NA
WP_003122684.1\|5185314_5185794_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003144014.1\|5185954_5186950_+	FecR family protein	NA	NA	NA	NA
WP_003089547.1\|5187050_5188226_+	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA
WP_003131508.1\|5188225_5190217_+	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	G9BWD6	Planktothrix_phage	6.9e-35	39.3
WP_004343750.1\|5190222_5191647_+	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA
WP_003163333.1\|5191695_5193342_-	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA
WP_003450962.1\|5193555_5194902_+\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_003114503.1\|5194924_5196208_+\|tail	pyoverdine-tailoring periplasmic protein PvdN	NA	NA	NA	NA

DBSCAN-SWA_7

5644211 : 5651105

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090386.1\|5644211_5644880_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1
WP_016562011.1\|5644990_5645386_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.5e-47	71.3
WP_016562012.1\|5645382_5645742_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.1e-34	61.7
WP_003090391.1\|5645741_5646047_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003119979.1\|5646043_5646379_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.5e-38	69.4
WP_003108776.1\|5646375_5647359_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_016852739.1\|5647446_5648421_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003113366.1\|5648425_5649823_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003119978.1\|5649824_5651105_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.8e-97	45.2

DBSCAN-SWA_8

6720409 : 6729438

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092260.1\|6720409_6721450_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
WP_003129950.1\|6721583_6722090_-	CinA family protein	B5TK85	Pseudomonas_phage	1.8e-56	76.0
WP_003098486.1\|6722237_6723245_+	TolB family protein	NA	NA	NA	NA
WP_003113873.1\|6723370_6725938_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
WP_003119354.1\|6726004_6726328_+	ferredoxin family protein	NA	NA	NA	NA
WP_003113871.1\|6726754_6727759_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_016852568.1\|6727863_6728757_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003098558.1\|6728802_6729438_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3

Anti-CRISPR protein detection

Acr_ID: NZ_CP008873.1|WP_003158159.1|2670262_2670586_-|hypothetical-protein

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Acr_ID: NZ_CP008873.1|WP_003158160.1|2670604_2670997_-|hypothetical-protein

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Acr_ID: NZ_CP008873.1|WP_003158163.1|2672738_2673113_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP008873.1|WP_003158159.1|2670262_2670586_-|hypothetical-protein

2670262_2670586_-

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

NZ_CP008873.1|WP_003158160.1|2670604_2670997_-|hypothetical-protein

2670604_2670997_-

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP008873.1|WP_003158163.1|2672738_2673113_-|hypothetical-protein

2672738_2673113_-

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008873

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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Click the colored protein region to show detailed information