CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013476	Turicibacter sp. H121 chromosome, complete genome	3 crisprs	DEDDh,RT,cas9,cas2,csn2,cas3HD,csa3,WYL,cas3,DinG	5	12	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013476_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013476_1

1032562-1032637

Orphan

Consensus_repeat	Method
GATTTCTGAAAGAAATCTATTCCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013476_1

>merge|NZ_CP013476|1|1032562-1032637|CRISPRCasFinder
GATTTCTGAAAGAAATCTATTCCTCAACTGCTAGGGCTTGGGTCACCTAGCGATTTCTGAAAGAAATCTATTCCTC

>NZ_CP013476|1|1|1032562-1032637|CRISPRCasFinder
GATTTCTGAAAGAAATCTATTCCTC	AACTGCTAGGGCTTGGGTCACCTAGC
GATTTCTGAAAGAAATCTATTCCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013476.1\|WP_055305066.1\|1038702_1040085_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_068759177.1\|1041014_1041854_-\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|223364
NZ_CP013476.1\|WP_055275279.1\|1031399_1032191_+\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|179508
NZ_CP013476.1\|WP_055275281.1\|1032829_1033624_+\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|179508
NZ_CP013476.1\|WP_055275278.1\|1029727_1031140_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_144436956.1\|1033735_1035094_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235168
NZ_CP013476.1\|WP_055275289.1\|1040315_1040882_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP013476.1\|WP_055275271.1\|1021776_1023057_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
NZ_CP013476.1\|WP_055275273.1\|1023186_1024074_-\|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl\|CDD\|234849
NZ_CP013476.1\|WP_055242500.1\|1017472_1020658_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP013476.1\|WP_068759178.1\|1046712_1048008_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP013476.1\|WP_055275269.1\|1020696_1021761_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP013476.1\|WP_068758944.1\|1048642_1049938_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP013476.1\|WP_082411188.1\|1026799_1027696_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP013476.1\|WP_055275275.1\|1024186_1025551_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236744
NZ_CP013476.1\|WP_055242526.1\|1026049_1026691_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP013476.1\|WP_068759176.1\|1035397_1038016_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223503
NZ_CP013476.1\|WP_055275277.1\|1027838_1029629_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238518
NZ_CP013476.1\|WP_055242471.1\|1044979_1046515_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP013476.1\|WP_055305063.1\|1042055_1044716_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515

Protein	Function_ID	Function_description	E-value
NZ_CP013476.1\|WP_055275289.1\|1040315_1040882_-\|acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.22594e-63
NZ_CP013476.1\|WP_068759177.1\|1041014_1041854_-\|prephenate-dehydrogenase	gnl\|CDD\|223364	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism].	1.26356e-63
NZ_CP013476.1\|WP_055275279.1\|1031399_1032191_+\|membrane-protein-insertase-YidC	gnl\|CDD\|179508	PRK02944, PRK02944, YidC family membrane integrase SpoIIIJ.	1.8345e-53
NZ_CP013476.1\|WP_055275281.1\|1032829_1033624_+\|membrane-protein-insertase-YidC	gnl\|CDD\|179508	PRK02944, PRK02944, YidC family membrane integrase SpoIIIJ.	2.27626e-55
NZ_CP013476.1\|WP_144436956.1\|1033735_1035094_-\|hypothetical-protein	gnl\|CDD\|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0.00565269
NZ_CP013476.1\|WP_055275271.1\|1021776_1023057_-\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
NZ_CP013476.1\|WP_055275273.1\|1023186_1024074_-\|aspartate-carbamoyltransferase-catalytic-subunit	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	1.7984e-160
NZ_CP013476.1\|WP_055242500.1\|1017472_1020658_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP013476.1\|WP_068759178.1\|1046712_1048008_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	5.70722e-156
NZ_CP013476.1\|WP_055275269.1\|1020696_1021761_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP013476.1\|WP_068758944.1\|1048642_1049938_+\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.52161e-80
NZ_CP013476.1\|WP_082411188.1\|1026799_1027696_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	9.39954e-58
NZ_CP013476.1\|WP_055275275.1\|1024186_1025551_-\|hypothetical-protein	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	1.22711e-137
NZ_CP013476.1\|WP_055242526.1\|1026049_1026691_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	7.67737e-31
NZ_CP013476.1\|WP_068759176.1\|1035397_1038016_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	4.33876e-118
NZ_CP013476.1\|WP_055275277.1\|1027838_1029629_-\|aminopeptidase-P-family-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	1.31488e-110
NZ_CP013476.1\|WP_055242471.1\|1044979_1046515_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP013476.1\|WP_055305063.1\|1042055_1044716_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0

>NZ_CP013476.1|WP_055275279.1|1031399_1032191_+|membrane-protein-insertase-YidC
MKKKLSLVLCFVLAIGLLSGCAISPEPITAETASGLWDKVFVLPLASFITLLYKLLANNLGFAIISATAIVRLVLMPLYSKSNKSMAVMQEIQPEMQRIQKKYENKKDQASQVKMQQEMMELYKKYNYNPMMGCVLPFLQMPIFLAFYQAISRHPLIKDAGAAEFFGINLGATGTIPNYVLAFIVAGLTIYSQRLMNKNMAANMNSQQNQTSNMMMKVMTYYFPFAMFSITIGTPFAFGLYFLTGQIMTIVQSLIFKRPGAKK
>NZ_CP013476.1|WP_055275278.1|1029727_1031140_-|hypothetical-protein
MGIATNVELHKLYEAAIAFRKLQPWKWMYASQVFIIHDDERDIDGFCSIMGMMGEHFSLSVYLGEAGYQSYRYLYDKASLAYMDHIFMKAEVKKNCLTVSFENPEALTEHDDEQAMFLGYQFKGKNECPRFRYHHPGIYSWYLTDGWQCRFLTKALEQAMIVARLELTKDLKVPEIYDSKYYLRYYTEEKGWDGTFVDATLYKKAPTPKKTIFQNDLLAYRVKKLPKLLITLEAIQFYLPNPVVEVGSGQPFFMLVTALVDSEEGQLFYLDVQETAALYLTDIVTELAKQFLELKIRPCEIIAEDEDTYALLEDVCKQIDVKLSIDYHTARAHEFAEYIFEELQNASSNTVKVIESEQSDIDKLIMFADQITDTLQIQQALDDLSEQAKEQYKLITQTFVLAMYTIRDQIPSEWTGDAVKDICLNVLPEQLEKDVLAQCKPVLSHFVTVLGEDEIIPNYRSLLLVINNCL
>NZ_CP013476.1|WP_055275277.1|1027838_1029629_-|aminopeptidase-P-family-protein
MNVNEKIKALRTEMKRIGVQAYIIPSADAHLSEYVATHWQGRAYLSGFTGSAGTLVVTETESGLWTDGRYFIQAESELAGSEVQLFKMGQSGVPTITEYLANTLQEGSCVGFDGKVLAASNVLEMLKTFEPKKIKVCGEHDLLDSIWTDRPAIPSTDVFIHETKYTGYSCADKLNMVRQEMKKSNLNGYVLTSLGSIAWLFNVRGDDILFNPLVVSYALVLEESAYLFVDSHRLSDEVTNYLTTNGVTLKEYDEIDEILASSVVSGRILCPLETVNYYLYHVLVNHEGAEVVAGFDLVNNLKAVKNETEIKNTHNAQVKDSCALVGAMQEIYEKLDAGELVTEYDVREILEVYRRRQPLNYGSSFGAIVAYGANAAMMHYNPTKEKCSVIEKKGFLLIDSGGQYLDGTTDITRTFVLGKLTEEEKIHYTLVLKGHINLSKAVFQKGCSGGNLDILARQPLWSHGLDYRCGTGHGVSYFGGVHEGPQGFRLTQTVPLQPGMMTTNEPGVYEAGRHGIRIENTLLVVEKCATEYGEFYEFETISYFPIDTKAIIVEMLNDEELAWFNQYHQKVVETLSPHLTGKALEWLKREAIQLSR
>NZ_CP013476.1|WP_082411188.1|1026799_1027696_-|ROK-family-protein
MKKYLVLDIGGSAIKYAKMDEEATILEKGSVKTPLDKVESLIEVIGSLYDQYQDEVEGIAISMPGVLDVERGYAYSGGFLRYNTDVEIVKLIQERCPVKVTIENDGKCAALAEVWRGSLQDVNDAIVIVLGTGIGGGVVINRKVHKGSSSFAGEFSSMRLNNQKLDDGEYTWGFSGGARQLSSKVAEVKQLNPDEVDGYFIFEKANEGDEEVLAILDEFTKQIAAQIVNLQCVIDPQRVAIGGGISAQPLLLEYIRKNVDSFSDNFGNYKPGVQVVPCTFRNDSNLIGALYHYLTYTA
>NZ_CP013476.1|WP_055242526.1|1026049_1026691_-|HD-domain-containing-protein
MEQVYPRIVEFLEEELGKDTSGHSLDHAIRVYKNAKAILKSEGGNERVVLISALVHDVIDSKLFEDSREQQAKLLIFLQTLGCSQVELKEIFYIIENISYKGGTGEPVHTLEAKIVQDADRLDAIGAIGVGRTFMYGGSRGTKMYDENILPMEFEDETAYRQHKGTVINHFYEKLFKLKDLMNTETAKKIANQRHEFMVTFVEEFLNEWKGQA
>NZ_CP013476.1|WP_055275275.1|1024186_1025551_-|hypothetical-protein
MEKKLILDVHEKPKVAHWIALSIQHVLAMFGSTVLVPMLTGLPVSLALVSSGIGTLFYLFVTKGKSPVYLGSSFAYIAPITSALALGATLNADGSIASHPNYGAVMGGLMMVGLVYLVIALIIKFIGTDWLNKILPPVVIGPTIMVIGLSLAGTAVNMASEHIVVALITLLTAIIVSTYTKGLLQLLPIFSGIVVGYISAVAFQLVDFSAVNEASLFAMPNFAFLHSKPVFNLEVAAIMVPVAIVTITEHIGDHLVLGSIVGRDLTKNPGLHRTLIGDGVATFFAGFIGGPANTTYGENTGVIGLTKVASVWVIGGAAVTAFALGFIGKFTALVQTIPSAVMGGVSILLFGVIASSGARVLINNQIDFGRQRNLIIGAVILIVGIGGLTINIGQITLSGMALAAIIGVILHLILPDKEASYGQRSNKTEFELEVVGEESTTSETVMTKEQTTAI
>NZ_CP013476.1|WP_055275273.1|1023186_1024074_-|aspartate-carbamoyltransferase-catalytic-subunit
MSAIKHLTRLSDFTVEEIMEILERANRYASGETIPQLEGKVVANLFFEPSTRTQYSFMMAEQKLGLKTMDFTAETSSVQKGETLYDTVKTFEAIGVDGVVIRHPQNNYFEELIPNLNIPIFNGGDGSGNHPTQSLLDLLTIYQEYGKFEGLKIAIVGDIAHSRVAHTNIEVMNRLGMEVHLVAPEQFQEEGYAWENLDEVLEEMDIIMLLRVQHERHHGGMQLTKEEYHKQYGLTVEREKRMKEGAIIMHPAPFNRGVEIADDVVECKRSRIFKQMSNGVFIRMAVLVGSLGYVD
>NZ_CP013476.1|WP_055275271.1|1021776_1023057_-|dihydroorotase
MILLKNGRQINESNELVAVDLLVKDGIIIEMTECIENTEAQVYDLAGKLVSPGLIDVHVHLREPGYERKETIETGTKAAARGGYTTIAAMANTIPVPDSMESVTYIEGLLQQSAQVRVFPYAAITLGERGQEIVDVEALSETSILGFSDDGRGIQEAGVMYQAMQRAKAVNKPIVAHCEDDSLLFGGYLHDGEYAKANGHRGILSVSESAQIARDIMLAQATGVHYHICHISTKESVELVRFAKAQGINVTAEVSPHHLILCDTDIVNDDPNFKMNPPLRADADRIACVQGLLDGTIDVIATDHAPHHEDEKAWGIETAPFGIVGLETAFPLMYTTFVKTGKMTLKQLIDCMSTKPATIFNLPYGKLEVGAVADITIIDLDKEMEIDSTQFLSKGKNTPFNGYRVAGWPVMTLVDGKVVYKDEQVN
>NZ_CP013476.1|WP_055275269.1|1020696_1021761_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MYNRKLVLEDGTVFLGTAFGCLEPMTGEVVFNTGMTGYQEILSDPSYFGQMVTMTYPLIGNYGINDHDFESFSPSASALIVKEYCEVPSNWRSAKTLSELLEAKGVPGLCNVDTRALTIKIREHGAIRGMIADINKSNEEILAELKATPVLDRHVEQVSTKMVYSAPGKGHRIVLVDFGVKKGIIRDLTARGCEVIVVPFNTTASQIDHLNPDGVVLSNGPGDPKDVVEALPMIREVQEKYPLMGICLGHQLFALANGADTKKMKFGHRGCNHPVKDLETNKVHITSQNHGYEVCRQSVENTPLEITHVALNDNTVEGLKHKEYKAFTVQYHPEASPGPDDASYLFDRFIANLK
>NZ_CP013476.1|WP_055242500.1|1017472_1020658_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDINRILVIGSGPIIIGQAAEFDYAGTQACQSLKEEGYEVILVNSNPATIMTDTEVADKVYMEPLTKEFLSKIIRKERPDAVLPSLGGQTGLNLVVELAEDGILRECGVEILGTDLAAIKKAEDRDMFRELMFELNQPIPESVIVNTVEEAVDFANEIGYPIIVRPAFTLGGTGGGIVEDEEGLRTTVENGLNLSPVTQCLIEKSIAGYKEIEYEVMRDANDNAIVVCNMENFDPVGIHTGDSIVVAPSQTLADREYHMLRDVSLTIIRALGIEGGCNVQLALDPNSFNYYVIEVNPRVSRSSALASKATGYPIAKIAAKIAVGLTLDEIINPVTGVSYACFEPALDYVVAKIPRWPFDKFNSANRRLGTQMKATGEVMAIGRNFEESLLKAVRSLETKVYHVELESLKEESDEILWKRTKFADDERLFVISELIRRGTTIEEIHNVTKIDLFFLTKLKGIIDFESVVKENPWNLDILGQAKRLGFADITIAKYWNSTELDVYNFRKEKSLMPVYKMVDTCSAEFESKTPYYYGTYETFNESKRTDKPSVVVLGSGPIRIGQGVEFDYATVHCVMAIQQAGYEAIIINNNPETVSTDFSISDKLYFEPLTIEDVMHVIDLEQPEGVIVQFGGQTAINLASKLQERGIKILGTSLENIDRAEDRDQFEKLLKDLEVPQPLGATCQSVEGAKEIANRIGYPVLLRPSYVLGGRAMEIIDNDAEIERYMKEALKENGENPILIDRYLTGKEVEVDAISDGENVYIPGIMEHIERAGVHSGDSMAVYPPQTLSKEVMDKLIDYTTRIARGLKIIGLLNIQFVVTKEEEVYVLEVNPRSSRTVPFLSKITNVPMANIATKAILGQSLVEQGYETGYHPHSEGVYVKAPVFSFSKLRKVDISLGPEMKSTGEAIGKDRTLEKALYKALVAAGMKMPTHGRILFTIGNKDKEEAVELARQFTEIGYELISTEGTCKLLHENGIYAVPIAKIGEEGKTVLDVIRGQQVQFVINTFSVSKKDRITDGFLIRREAVENNIPCLTSLDTARAVYKVLESMSFAIDAAI
>NZ_CP013476.1|WP_055275281.1|1032829_1033624_+|membrane-protein-insertase-YidC
MKKNFSLLLFLVLTIGLLSGCSISTEPITAATATGLWDKLFVLPLANFITFLYNILNNNLGLSIILATAIVRLVLIPLYLKSNQSTMVMQEIQPEMEKMKKKYEHKQDQASQVKMQQEMMELYKKYNFNPMMGCLLPLLQMPIFLAFYQAISRHPLIKNASANEFFGINLGATGTPANWILALIVAGLSIYSQRLMNNNMADTMKNSQQNQANNTMMKVMTYYLPFAMFSITIGTPFAFGLYFLTGAIMQIIQFLIIKKPQRKK
>NZ_CP013476.1|WP_144436956.1|1033735_1035094_-|hypothetical-protein
MKATKLELKSLYEAADEFERLQPWEWISEYQLLVVEDPETHIMGFCCIIGNKSDERGLKVYLGIDGLRHYIEMLDFNQLTIEDETLDSLLSRETCLSVGFNRVSELRNREVVAQFRDCLAGFVPISLTGGWQCRFLTQALKQVGELAELVKETPSFTLEDDQVLMRLQDFEGNWKTLKISLSVFLEQMKETGVRYENELAAYRISKLPSTNMVFEIARFLMPRPIEEKGDSRAYYPMITAILEKETKQLVFAEMSSPSLESQETILSRFANTLIKDLEFKPQCLVTDCEAVLRQFKDFSDKTKIPLMKVPELEAATDFVCDLMKIEEQFDASMEVDIEENIDLVLLTSREICQNILECDALSRHLPEGVKQQFTNIVELFHVVMLGHFQELPDHWSVQNVERACKEVLPGLLTEEELKIVPDILTHYLDVVGEAELIPNYIHLQKCVTESYS
>NZ_CP013476.1|WP_068759176.1|1035397_1038016_+|FAD-dependent-oxidoreductase
MIQSVLLKNDVYWLGVLDPNLDVFDIIMETKYGTTYNSYLVNTTEGAILVETVKEKFFDTYLQKIEEAIGDLSQIKYIITNHTEPDHAGSIGRLVKLIPGLTVIGSKTAITYLKDILNISFNYLTADSLKTFTLGEKTFDFIPAPFLHWPDSMYTYLSSDNVLFTCDSFGSHYSPKHGIKLSEVPASEEEAFQDALLYYYTAIFSPFKPYVIKAINKINDLKLDMVCTGHGPVLDTRIDEIIETYRNWSTPAKKEGPKKVVMPYVSAYGYTGELAEAITKGIHEVDPTIQVIPYNLDILNYPQKKDEILAHFADADGILLGTCTINGDALPIIWDLSINLNPIVHGGKIVSAFGSYGWSGEGVDNIMDRLHQLRMKVIDGFKIKFRASESETQAAIDFGKLFANSLLTGKVPARKKETGAALTAEELNPSGKVVLWRCIICGEVYPGVLPPEVCPACGVGSDLFEIYEEEVINFKSTADEKFVIVGGGVAAVTAANAIRVRNEVASITMISAESSYPYYRPALSDLIVKDVPAQEFNLNPENWYTENHINVQLNTKVTALNVDEKVLTLEDGSTVTYDKLILATGTSNFIPPIPGTEAEGIFSIKYKTDALALRNYAKGKQNAVIIGGGVLGLEAADALQELGLNITVLEVADRLMPRQLDESTSSFISNILAERKIDVRTGVQVQEIINSNGQVSGVKLADETINADVVVISAGVRANTQLATMANIETNHGIVVNNQMQTSVADIYACGDVAEFEGISTNLWAPAIDQGKVAGINAVGDHAEFSNKVEPLSLIAFDTEVFAMGTYPTENIEEYQILLDSNAKTGHFKKLYFKEDELVYGVLFKDISKASVLLTGVRNGDDYATVVSKLYR
>NZ_CP013476.1|WP_055305066.1|1038702_1040085_-|hypothetical-protein
MSKDSIALWTRLYEVCKKLRKLNPWEFWSNQDIILIEDPVTKMMGYCVVEQDPLDGTLMINILHGQAGMRAYLESLNYDFEELEDMNYIKSSYRQQGFLLLYANRDELFEEDYERIKSVGMSFRGKAQWPILRRLFPGSKPWLLETDEDVRLLTMYLDQLVQVLTDFDQGKIDLRENFYLTISVQNGKWTLTYTEEDELLGEEEIFIYPNELKAHRVSKLPKQPVIMEGSQFYLPTPLWDEENNRELFPLLTTFINHESGEVYSGEIYKSTREELELVSDRLADLMLTRLQFRPREIIVSDEILLDLISDFCEKANIDCDLGPTVAADAFMSSFLSTQMGDLNGEEQAFLHLIQAAEQSYEVMLETDLGQMLTSIQKSALKDIWIYSVLFLYKEFNELPGEWSKEGFEALLQSHLLEESVKNDYRPYIGSSIKAYLDCQQELGLFKNSFVLSHVLAKYYK
>NZ_CP013476.1|WP_055275289.1|1040315_1040882_-|acetyltransferase
MEARDIFERDKLGEEISHQDPEYHKIREMIDEAQKLLFELNNKYHEEPEVRRLFSQLTGIEVDKTFRLRPPFYTDFGKNIRVGKNVFINHCCTFMDRGGITLEEGVLIGPKVNLITINHPLEPHRRHSTISSPILIKKNAWVGAAATIMPGVTIGENAVVAAGAVVTKDVLPNTVVAGVPAKVIKMIE
>NZ_CP013476.1|WP_068759177.1|1041014_1041854_-|prephenate-dehydrogenase
MNIVVVGLGVIGGSFAMALKEASYQQVYGIDTNQQTLEKAKQMGLIKDGSVTGELFLKQADLIILSIYPKLVKSFIQSNRDNFKPGCVITDATGVKGMFINDILEILPNEVDFVFGHPMAGREKRGIDFASSRVFKGANYLITPTPRNQERNIELIENLAYEIGFKKVRRITPDFHDEMIGFTSQLPHAMAVALINSDIEGRDTGSFIGDSYRELTRIANINEDLWSELFLGNKDHLLKAINRFELELDLIKKAIYDNDAETLKQYFIKSTKRRERLDQ
>NZ_CP013476.1|WP_055305063.1|1042055_1044716_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MSEQNKVEQEVKPVQEWTNEQIDAHVDELVQNALAALEKFESFDQEAVDYIVAKCSVAGLDQHGVLAEAAVNETGRGVFEDKAVKNLFACEYVTNNLRHLKTVGIINEDPLTGITEIAEPVGVICGIIPTTNPTSTVIFKSLIALKTRNPIIFSFHPSAYECSVQAAKVIRDAAIAAGAPDNCIQWLGMRSMYATNALMNHSGVATILATGGNAMVKAAYSCGKPALGVGAGNVPAYVEKSCVLKRAVNDIVLSKSFDNGMICASEQAAIVDQEIYDAFKVEMSRFKVYFANHEEKAKLETYMFGCTAYSDKVNEARLNPAIVGKPATWIAEQAGFVVPDDTQIICAECEEVGPNEPLTREKLSPVLAVLKATSTEDGIAKSAAMVAFNGLGHSAAIHTQNHEISIEFGLKCKAIRVIENAPSTFGGIGSVYNAFIPSLTLGCGSYGHNSVSNNVSAINLLNIKRIGRRNNNMQWMKLPPKIYFERNSIRYLRDMKEMEKAMIVTDRGMYNLGYVDKIEDVIKRRRNKVNVELFFDVEPDPSIETVNAGVELMRKFQPDVIIALGGGSSMDAAKVMWLMYEHPEVNFDDIKQKFMDIRKRAFKFPELGKKARLICIPTTSGTGSEVTPFAVITDKQENKKYPLTDYSLTPTVAIVDPEFAMSMPASIAADTGIDVLTHAIEAYVSILASDFTDGLAKQAVKLVFDYLERSVKNGKNDPEAREKMHNAGTIAGMAFANAFLGMNHSLAHKIGGEWHVPHGRTNGILLPHVIRYNGTIPTKLNIWPKIENYKADVKYMELAQLIGLNPQTPAEGVAMFADACEELCKKVGVPANIKSQGIDQEAWEESVHRMAMNAYEDQCTPANPRMPMVHDMEAILRVIYDYESKF
>NZ_CP013476.1|WP_055242471.1|1044979_1046515_-|glutamine-hydrolyzing-GMP-synthase
MQHDQVIVLDFGSQYNQLIARRIREFGVYSELKSHKLTAEDIKKMSNVKGIIFSGSPNSVTQEGAFTVDPEIFNLGLPILGICYGMQLTTHMHGGTVERAEQREYGKAEITIKNNSKLFQGTPEEQVVWMSHGYHVTNLPEGFVVDASSDSCPIAAASCEERNIYLVQFHPEVQHSVHGTEMLRNFIFNVCGAQANWSMKNFIEDQVEKIRAQVGNDNVLCALSGGVDSSVVAALIHRAIGDQLTCMFVDHGLLRKGEAESVVETFDGKFNMNFIKIDAQERFLSKLKGVSDPEQKRKIIGNEFVYCFDEESAKLKDMKFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDMEFELIEPLNTLFKDEVRQLGLELGLPEEIVFRQPFPGPGLGIRVLGEVTEEKLEIVRDSDFILREEIKKAGLERDVWQYFTALPNIKSVGVMGDERTYDYTVVVRAVTSIDGMTSDWARIPFEVLEKISVRIVNEVAHVNRVVYDITSKPPATIEWE
>NZ_CP013476.1|WP_068759178.1|1046712_1048008_-|NCS2-family-permease
MNKFFKLEERGTTVSREFIAGLTTFLSMAYIIFVNPNTLGASGMDTGAVFTATILAAAVGTLIMGLYANFPVALAPGMGMNAFFAYTVVLMMGYSWQQALAGIFVSGILFIILSATGLRELIINSIPTSLKHAVGTGIGFFIAFLGFQNSGIIVNNDATLVGIGNFTDPNVLITVIGLIVTLILLVRKTPAAIFIGMIVTAVVGIFLGVVDLPTQIIAPIPSLKPTFGALFEALPSIFTAEMIPVIFSFLFVDFFDTAGTLMAVGSRAGLVNEKGHLVDGDKALLADSTATVIGSVLGTSSTTSFVESLTGVEAGGRTGLTSVFTALCFLVMLFCSGLLSVVTSAVTAPALITVGILMASSLGDIEWKNLETSIPSFVTIIMMVLGYSIAEGIASGFLLYPIMMVAARREKEIHPVMWVLSVIFLIHFVLA
>NZ_CP013476.1|WP_068758944.1|1048642_1049938_+|ISL3-family-transposase
MSHNNCILTLLDLKDKNITFSENWMKDVQINGIRSKVISGILSFQPTHCYNCGHLFDSQIIKHGFKTSRIKMMKLSGFDTYLDLKKQRYKCRHCDRTFTLKTSLVESNCYLSNPLKQAIFLEASHKKSESDIARELNVSHSTVNRIIHTSYEEQSLHFNSLPKVLCFDEFKSVKSAEGAMSFIFCDASNGKLIDIVEDRRLSTLKPYFMRFSKEAREGVTHVVIDMYAPYMTLIKEVFPNAKIVLDKFHVVQLLSRALNKTRIRFMNQNKEFYNKFKHYWRLLLKAQEDIHSTHYFYSNCFKKQISQQEIIDFLLALDPELKATYDFYQTIKQAIKLRNFDAFHHAIQNPSDLLSPEMKTALKTLTNYQDYIKNTIETSYTNGVLEGINNKIKVIKRMAFGYRSFYHFKARILIIHKYTFEQKNKRNQTAQ

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Crispr_ID: NZ_CP013476_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013476_2

1196524-1196721

Orphan

Consensus_repeat	Method
CCTGAATCAAAACCTGAA	CRT

4 spacers

The CRISPR arrays of NZ_CP013476_2

>merge|NZ_CP013476|2|1196524-1196721|CRT
CCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAAGATAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAACCTGAA

>NZ_CP013476|2|1|1196524-1196721|CRT
CCTGAATCAAAACCTGAA	TCAAAACCTGAATCAAAACCTGAATCAAAACCTGAATCAAAA
CCTGAATCAAAACCTGAA	TCAAAACCTGAATCAAAA
CCTGAATCAAAACCTGAA	TCAAAACCTGAATCAAAACCTGAAGATAAA
CCTGAATCAAAACCTGAA	TCAAAACCTGAATCAAAA
CCTGAATCAAAACCTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013476.1\|WP_068759218.1\|1195210_1195912_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055276644.1\|1187941_1188532_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP013476.1\|WP_055276652.1\|1183761_1185126_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP013476.1\|WP_156344101.1\|1197968_1198127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055244570.1\|1190416_1192030_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP013476.1\|WP_055244572.1\|1192576_1194160_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP013476.1\|WP_068759217.1\|1186841_1187678_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP013476.1\|WP_055304493.1\|1199088_1199301_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|370725
NZ_CP013476.1\|WP_055277606.1\|1199675_1200401_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP013476.1\|WP_055276650.1\|1185141_1185663_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380313
NZ_CP013476.1\|WP_055276646.1\|1187677_1187926_+\|spore-coat-protein-CotJB	unknown	unknown	gnl\|CDD\|378904
NZ_CP013476.1\|WP_082411258.1\|1201197_1201308_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378820
NZ_CP013476.1\|WP_068759220.1\|1202635_1203433_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NZ_CP013476.1\|WP_082411231.1\|1185906_1186242_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153110
NZ_CP013476.1\|WP_055277623.1\|1203472_1203754_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055244583.1\|1198744_1198930_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|184951
NZ_CP013476.1\|WP_055277604.1\|1198128_1198443_-\|YbjQ-family-protein	unknown	unknown	gnl\|CDD\|376657
NZ_CP013476.1\|WP_055277602.1\|1196994_1197921_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP013476.1\|WP_055244589.1\|1200662_1201043_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055244574.1\|1194502_1194937_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP013476.1\|WP_055276644.1\|1187941_1188532_+\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	1.73059e-63
NZ_CP013476.1\|WP_055276652.1\|1183761_1185126_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	2.4977e-132
NZ_CP013476.1\|WP_055244570.1\|1190416_1192030_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.25709e-164
NZ_CP013476.1\|WP_055244572.1\|1192576_1194160_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP013476.1\|WP_068759217.1\|1186841_1187678_+\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	2.22124e-05
NZ_CP013476.1\|WP_055304493.1\|1199088_1199301_-\|GTP-binding-protein	gnl\|CDD\|370725	pfam09855, zinc_ribbon_13, Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082). This domain, found in various hypothetical prokaryotic proteins, as well as some Zn-ribbon nucleic-acid-binding proteins has no known function.	1.34168e-29
NZ_CP013476.1\|WP_055277606.1\|1199675_1200401_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.53732e-126
NZ_CP013476.1\|WP_055276650.1\|1185141_1185663_-\|hypothetical-protein	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	2.35489e-25
NZ_CP013476.1\|WP_055276646.1\|1187677_1187926_+\|spore-coat-protein-CotJB	gnl\|CDD\|378904	pfam12652, CotJB, CotJB protein. CotJ is a sigma E-controlled operon involved in the spore coat of Bacillus subtilis. This protein has been identified as a spore coat protein.	8.16111e-31
NZ_CP013476.1\|WP_082411258.1\|1201197_1201308_+\|hypothetical-protein	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	0.00230934
NZ_CP013476.1\|WP_068759220.1\|1202635_1203433_+\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	2.8979e-05
NZ_CP013476.1\|WP_082411231.1\|1185906_1186242_+\|hypothetical-protein	gnl\|CDD\|153110	cd01051, Mn_catalase, Manganese catalase, ferritin-like diiron-binding domain. Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenzymes are homohexameric structures; each subunit contains a dimanganese active site. The manganese ions are linked by a mu 1,3-bridging glutamate carboxylate and two mu-bridging solvent oxygens that electronically couple the metal centers. Several members of this CD lack the C-terminal strands that pack against the neighboring catalytic domains as seen in L. plantarum. One such sequence, Bacillus subtilis CotJC, is known to be a component of the inner spore coat that interacts with spore coat protein, CotJA. It has been suggested that CotJC could modulate the degree of Mn SodA-dependent cross-linking of an outer coat component, or the two enzymes could serve to protect specific cellular structures during the developmental process.	1.40719e-29
NZ_CP013476.1\|WP_055244583.1\|1198744_1198930_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|184951	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional.	5.43293e-13
NZ_CP013476.1\|WP_055277604.1\|1198128_1198443_-\|YbjQ-family-protein	gnl\|CDD\|376657	pfam01906, YbjQ_1, Putative heavy-metal-binding. From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerizes as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.	2.14042e-45
NZ_CP013476.1\|WP_055277602.1\|1196994_1197921_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	8.44764e-11
NZ_CP013476.1\|WP_055244574.1\|1194502_1194937_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.31762e-13

>NZ_CP013476.1|WP_068759218.1|1195210_1195912_+|hypothetical-protein
MQCNISKKPIIILGSLLTLLIVVTIIYGISSAKNKELKLEQLIDTSYEVLDVRRHKKEKTYEVDIQAELSYADNILLANKLLKELEQYDQTNAVKLNMNVYQQKTTKTTKDSVDFTDQAYRYTIETNGSYIYQYEPLHTANLTNDLLFSTEWEIKDSQLSKNELTFSAILPKTLSPEEVTSLLNELADEMIRYNFKNTEKASATIQSEISDTETYYYLSEQPNYLIYKTRLIG
>NZ_CP013476.1|WP_055244574.1|1194502_1194937_+|GNAT-family-N-acetyltransferase
MITLRPISKDNFWDCIDLAVHPEQQSFVTSNAISIAQSKIQPECIPLAIYHEDVMVGFVMYCLDTDDDEYWIYRLMIDQHYQNQGFGTEALHQVIELIKNDKTRHQIFLGVHIESESAIHLYKQVGFEFNGQIFGQEHVMVLNY
>NZ_CP013476.1|WP_055244572.1|1192576_1194160_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MLTVSNVGLRYGDKKLFEEVNLKFTPGNCYGVIGANGAGKSTFLKILAGEIEPNTGHVSYPKDLRMSVLKQDHYQYDELPVLETVIRGNERLFQITEEKNALYMKPDFNEEDGIRAAELEGEFAELNGWEAESDAAALLQGLGIPTELHDKLMKDLTGAEKVKVLLAQALFGNPDILVLDEPTNHLDIQSINWLEEFLINFEGTVIVVSHDRHFLNKVCTHICDVDFGKIKLFVGNYDFWYESSQLLNRMAKEANKKKEEQIKELQDFIARFSANASKSKQATSRKKLLDKIKLEDLEPSSRRYPYVGFKPEREVGNDILMVEGLTKTVDGVKVLDNVSFMVRKDDKIAFIGDEIAVTTLFKILNGEMEADSGTFKFGVTIKTAYFPKDNSEFFNGSELSLVDWLRQYSDDQTESYVRGFLGRMLFSGEEALKKASVLSGGEKVRCMLSRMMLANANVLMLDQPTNHLDLESITALNNGLKDFTSNVLFASHDHQFIQTIANRIIDIKEDGSIVDKQTTYDEYLALA
>NZ_CP013476.1|WP_055244570.1|1190416_1192030_-|DEAD/DEAH-box-helicase
MTEITFKDLALSPAILKAIEEIGYVKPSPIQAEAIPVVLSGKDIIGQAQTGTGKTAAFMLPILEKIDPKNRNVQALVLCPTRELAVQVHEESKKFARNMRDVHILSIYGGQSYDPQIRALKKGVQIVVGTPGRVMDHMRRGTLKLENLKMLVLDEADEMLNMGFKDDIEEILEKTPESRQTVMFSATMAREIMNIAKTYQKSPEIVKVVSEELSNKKIDQYFVEVKRQDRVHAMIRCIDMMGLTSSIVFTNTKREVDELVSKLQEEGYVTEGLHGDLKQAQRDRVMNSFRRKNVNILVATDIAARGIDVSNVEAVFNYDIPLNEENYVHRIGRTGRAGMTGLSITFVFGKDMFRIRRIEDYTKTKMSKMPIPTVEQIQEKRSSNVIEDVIANLEGQDFTKENELIAAILEKGYSLEQVAAGLLRMNIGQSTKEYAHIEEVTSNNKSKGMRKNEVRLFVNVGSKQKVKAKDFVGMLTKKSDIPARAIGDIDVYKKFSFINVDKAHANAIIRKLNSKLINGKPVRAEKTAPGATAPKGR
>NZ_CP013476.1|WP_055276644.1|1187941_1188532_+|manganese-catalase-family-protein
MWVYEKRLQIPVDIKKRDLKMAKDIYDALGGSDGELNASMQYLHQRYTMPTGQSIATLNDIGTEELAHLEIVASMIYQLTDGATIEEIKAAGLDTSYAGRGLGVFPQDPNGVPWTAAYVSLKADPVADLTADMSAEQKARASYEHLLDLATDDDVKRVLAYLREREIVHFQRFGETLMDVQNHFNSDRYFFMNDEQ
>NZ_CP013476.1|WP_055276646.1|1187677_1187926_+|spore-coat-protein-CotJB
MNEKQLLTQIQAVSLIAIDLHLFLDTHPNDTKALQDYEKVSKQFQTLKDQYEKQYGPLVSFGHQSITNHNEWVSKPWPWQNK
>NZ_CP013476.1|WP_068759217.1|1186841_1187678_+|hypothetical-protein
MIYNPYNTTVQNPGLMQPGMLQQTSYPAAQQSSMLQQSSYPVAQQSVMPTATYPTSATTQLANTTAYQPVQQAFPAVQTVPVPTCGVPTPVCGVPMAQPVVIPQPVQQVQPVQQVQPVQPQVASTQATTAQHKKTTYVEAYLEPVDAQVPLMQPTVSKKVVEKKTYPVSDEIVYVEQKPLKNSTMQDYNLYLMENEYYSDDQPTYKKTVSPRTRADQTALTCENLPLATTYIRTQTYTGFDDPTQTLQQGTTFNALYDPYTPRKVGKPTVFMLKGGQR
>NZ_CP013476.1|WP_082411231.1|1185906_1186242_+|hypothetical-protein
MEEIKRAGFDGIYASRGTSVFLADPENTPWTAAYIDMKGDPVADITSNMGAEQRARAGYEHLLDMTTDEDVKKVLAYLREREIVHFQRFGETLVHVQEHLAHDKYFFKDSK
>NZ_CP013476.1|WP_055276650.1|1185141_1185663_-|hypothetical-protein
MLNTLEAIAKRRSHHEFKGTKLSKNQLELLIKCGLSAPSCNNEQPWFLVGILNCEIIHQLNDEIGMVKGHIGHDYFYGAPALILILGDKLATNAMVDCAVCTQNILLAAEDLNLASCWIDEVKALNQSEKFYDYEGKLKIPEGYEFMGGVALGERVNTPEEPEQRRGTWTIID
>NZ_CP013476.1|WP_055276652.1|1183761_1185126_+|MATE-family-efflux-transporter
MKANCSSEFLGTEKISKLLLSFSMPAFIAMLASGIYNIVDTIFVAKGIGTLAIGGIGIVFPIQTLYAAFAQMISIGAASAISRSLGEQNNNRANQVMTNAYILTTIISILLMITSFFFINQILYIFGSNEELIPYARDYLLISIWAIPFNALALLSSAVFRSEGNIKISMITVLIGSLFNIALDLLFIFVLNWGIKGAALATVLAQALATAFSLFFILSHRSIVKFERKYFIPNLKVSTSIISVGFSAFARNGASSLFALITNATLRSYGGTVSLTAFGTVNRIISFFFLPIMGINQGLQPIASYNYGAKQPDRIKQVVKLALIYTTIIGAIGSIVGILFPSTVINLFTKDKSLISEATFVLRLQLLFFWTIGLQMVASTFYQSLGKPIPSLFLSILRQFIILIPLILILPRYTSLGLNGVWYSFPISDFTAFVISALILWRAWHHLNKKSDDN
>NZ_CP013476.1|WP_055277602.1|1196994_1197921_-|CPBP-family-intramembrane-metalloprotease
MNLKLELQPKEVFSRIGFSLAISFLVVNGIQLAIIAILKTMDSPCLQSQWLTWILIVISFYLIGFPLFCWMVKDLPSVSMDGVQKLKLFNLIEYGCIAYTLAYVFNLFTLLLMAAIESLKGNFITNVGENLVVGTSSIGLFICGVILSPIIEEILFRKILIDKIKLYGDKVAILVSAVTFGVYHGNLSQVFYATALGAIFAYVTLKTNRVQYAIILHIFINGMSAVIMPAILGDGTEVIRIALAIGVVFTILVVGIVGLIKLMKKINLNSGTYYIHRHRLVQTIFGNGGMIGYLVISFVVIILTIITT
>NZ_CP013476.1|WP_156344101.1|1197968_1198127_-|hypothetical-protein
MTAIWVNMIIGGILLFYLSGILVVIGLLIAKVTERQRERKTEKEKFKDYKDY
>NZ_CP013476.1|WP_055277604.1|1198128_1198443_-|YbjQ-family-protein
MLIVTTDSIPGKEIVEVKGLVKGSTVRSKHIGKDISASLKTIVGGELNGYNEMLIEARQIAFGRMADEAQSMGANAIVGVRLMSSAVMAGAAEMVAYGTAVVVK
>NZ_CP013476.1|WP_055244583.1|1198744_1198930_+|(2Fe-2S)-binding-protein
MDLNQKICYCFNVTVGDIKKEIESGSTTLQEIQSETKAGTACKGCVKRLQETIDALLAEKA
>NZ_CP013476.1|WP_055304493.1|1199088_1199301_-|GTP-binding-protein
MKIEKYVCPKCENNSYEVDEFCATGSGLSKLFDVQNRRFTTITCTKCKYTEMYKGTTSDLENIFDFLIGG
>NZ_CP013476.1|WP_055277606.1|1199675_1200401_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRKWNNIKYGKAAKDAARSKVLARFGKEIYMAAKNGDPDPALNRNLASVIDRAKVAGVNREIIDRAINKAKGGSDENYDFIRYEGYGPNGSAVIVDTLTDNVNRTVAEVRSAFNKNGGKIGVSGAVAFMFEATALFGFNGNSADEILEGLMEADVDVRDVEEEDGEITVYADQDQFHAVQTALNEMGITEFEVAELTMLPTSTVELEGDALAKFLKLLDVLEDLDDVQQVHHNVELPEEE
>NZ_CP013476.1|WP_055244589.1|1200662_1201043_+|hypothetical-protein
MEIKTKHKKFKSFTDLYSFMVDGHLEEISVTMKYPDGTKSNGIMPIDMVLSFKCIEDIKSLDKELKELATKHNEDINKVREIAETYNEMNHFDDEEGELQSQLENIESSNELKQIIQQLVNERLQA
>NZ_CP013476.1|WP_082411258.1|1201197_1201308_+|hypothetical-protein
MGGAIATYYVLKYNAHSVSKLVLLGAAILAWIKTTE
>NZ_CP013476.1|WP_068759220.1|1202635_1203433_+|ABC-transporter-permease-subunit
MNLALFKREIKSNYKVFIIIFAVLLMYTSVVTSLFDPNLGSILEQFSQTMPELMSAFGMTSPGSTLIEFLSSYLYGFIYLVFPLIFEIIVANKLVARYVDRGSMAYLLSTPVSRKTIIMTQISVLWITLAALICLMTLAQIIVSHLMFPGDLDVSRLIYMNIGLYCLHLAISGICFFGSCISNEMKNSYLIGAGIPILFILIQILSNISDKLDSLKYVTLLTLFPAQEIASHETNGLFQAGILLLIATLLYSLGAYLFTKRDLPL
>NZ_CP013476.1|WP_055277623.1|1203472_1203754_-|hypothetical-protein
MATHNMYVQIIFDEKTKKFNCYADLGEVLTTLNDGDVFTISQQDTTNVLGTIKYSEDCKPYGYYFVSNDGQLTIELNDGMYGFIERQREDEND

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Crispr_ID: NZ_CP013476_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013476_3

1349787-1351075

TypeII

Consensus_repeat	Method
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	PILER-CR
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CRISPRCasFinder
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CRT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	PILER-CR

19 spacers

csn2,cas2,cas9

The CRISPR arrays of NZ_CP013476_3

>merge|NZ_CP013476|3|1349787-1351075|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTTATTTGAATAATCTAAGTTAGTCGGATTTGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACCGTAGTGATCGACGGCGTGAAATATGAGAGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACAACATATTCGTTGTTAATTGGTCACCATTGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTTATCTAAATAATAAGTGTATGACTGACCGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTGTTCCATATGAAACAATTGAGGAAACACAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTCGCTTTAGACTCATTCGATGCAGAACGCGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTAGCTTAGAGTTGATCGCGTCAGCGGTATGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACGAGAGTTTAAAATCCCTGGCAAGGCACAAGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACATAACTCTTAAAGGGGGAACGGATGTGGCAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTAAACGCTTAAACATCTCCGTATCAACCAAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACGTGACGATCTACTCATGACGCTATCAGCATGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACAGGTCCATCACAATCGCCATCAACATCAACGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACAAAAAGTCCTCCTGGTGCTGTTATTTAGTAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACGTTCTTGATCGAATAAATGATGATTCGATAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACCGCTATACTATCCCCCTCACCGACACACTCGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTGACTTTTGAGTTAGTACCATCAGCGGTATGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACCTTTTTTATTTGATAAGGCTAAGAATGGGGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACCCATTATCTCGGACAGTTTGCCGCATTAGAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACCTTACATCAGTGGATGGTCGTATGCACTTCGTTTTAGTACCCTTAAGATTTTATTGATTGTTAGTA

>NZ_CP013476|3|1|1349787-1350021|PILER-CR
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TTATTTGAATAATCTAAGTTAGTCGGATT
TGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGTAGTGATCGACGGCGTGAAATATGAGA
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AACATATTCGTTGTTAATTGGTCACCATT
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTTATCTAAATAATAAGTGTATGACTGACCGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTGTTCCATATGAAACAATTGAGGAAACACAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TCGCTTTAGACTCATTCGATGCAGAACGC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAGCTTAGAGTTGATCGCGTCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GAGAGTTTAAAATCCCTGGCAAGGCACAAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	ATAACTCTTAAAGGGGGAACGGATGTGGCA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAAACGCTTAAACATCTCCGTATCAACCAA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTGACGATCTACTCATGACGCTATCAGCAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AGGTCCATCACAATCGCCATCAACATCAAC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AAAAAGTCCTCCTGGTGCTGTTATTTAGTA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTTCTTGATCGAATAAATGATGATTCGATA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGCTATACTATCCCCCTCACCGACACACTC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGACTTTTGAGTTAGTACCATCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTTTTTATTTGATAAGGCTAAGAATGGGG


>NZ_CP013476|3|2|1349788-1351075|CRISPRCasFinder
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TTATTTGAATAATCTAAGTTAGTCGGATTT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGTAGTGATCGACGGCGTGAAATATGAGAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AACATATTCGTTGTTAATTGGTCACCATTG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TTATCTAAATAATAAGTGTATGACTGACCG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGTTCCATATGAAACAATTGAGGAAACACA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TCGCTTTAGACTCATTCGATGCAGAACGC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAGCTTAGAGTTGATCGCGTCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GAGAGTTTAAAATCCCTGGCAAGGCACAAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	ATAACTCTTAAAGGGGGAACGGATGTGGCA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAAACGCTTAAACATCTCCGTATCAACCAA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTGACGATCTACTCATGACGCTATCAGCAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AGGTCCATCACAATCGCCATCAACATCAAC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AAAAAGTCCTCCTGGTGCTGTTATTTAGTA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTTCTTGATCGAATAAATGATGATTCGATA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGCTATACTATCCCCCTCACCGACACACTC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGACTTTTGAGTTAGTACCATCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTTTTTATTTGATAAGGCTAAGAATGGGG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CCATTATCTCGGACAGTTTGCCGCATTAGA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTACATCAGTGGATGGTCGTATGCACTTC
GTTTTAGTACCCTTAAGATTTTATTGATTGTTAGTA

>NZ_CP013476|3|2|1349788-1351075|CRT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TTATTTGAATAATCTAAGTTAGTCGGATTT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGTAGTGATCGACGGCGTGAAATATGAGAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AACATATTCGTTGTTAATTGGTCACCATTG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TTATCTAAATAATAAGTGTATGACTGACCG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGTTCCATATGAAACAATTGAGGAAACACA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TCGCTTTAGACTCATTCGATGCAGAACGC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAGCTTAGAGTTGATCGCGTCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GAGAGTTTAAAATCCCTGGCAAGGCACAAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	ATAACTCTTAAAGGGGGAACGGATGTGGCA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAAACGCTTAAACATCTCCGTATCAACCAA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTGACGATCTACTCATGACGCTATCAGCAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AGGTCCATCACAATCGCCATCAACATCAAC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AAAAAGTCCTCCTGGTGCTGTTATTTAGTA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTTCTTGATCGAATAAATGATGATTCGATA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGCTATACTATCCCCCTCACCGACACACTC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGACTTTTGAGTTAGTACCATCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTTTTTATTTGATAAGGCTAAGAATGGGG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CCATTATCTCGGACAGTTTGCCGCATTAGA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTACATCAGTGGATGGTCGTATGCACTTC
GTTTTAGTACCCTTAAGATTTTATTGATTGTTAGTA

>NZ_CP013476|3|2|1350118-1350943|PILER-CR
	TTATTTGAATAATCTAAGTTAGTCGGATT
TGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGTAGTGATCGACGGCGTGAAATATGAGA
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AACATATTCGTTGTTAATTGGTCACCATT
GGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTTATCTAAATAATAAGTGTATGACTGACCGGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAACTGTTCCATATGAAACAATTGAGGAAACACAGTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TCGCTTTAGACTCATTCGATGCAGAACGC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAGCTTAGAGTTGATCGCGTCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GAGAGTTTAAAATCCCTGGCAAGGCACAAG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	ATAACTCTTAAAGGGGGAACGGATGTGGCA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TAAACGCTTAAACATCTCCGTATCAACCAA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTGACGATCTACTCATGACGCTATCAGCAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AGGTCCATCACAATCGCCATCAACATCAAC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	AAAAAGTCCTCCTGGTGCTGTTATTTAGTA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	GTTCTTGATCGAATAAATGATGATTCGATA
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CGCTATACTATCCCCCTCACCGACACACTC
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	TGACTTTTGAGTTAGTACCATCAGCGGTAT
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC	CTTTTTTATTTGATAAGGCTAAGAATGGGG
GTTTTAGTACCCTTAAGATTTTAGCTACTGTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013476.1\|WP_055275499.1\|1351723_1353025_+\|alpha-amylase	unknown	unknown	gnl\|CDD\|200452
NZ_CP013476.1\|WP_068759264.1\|1358843_1359401_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_068759261.1\|1348360_1348684_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP013476.1\|WP_144436988.1\|1338139_1338469_-\|DUF3784-domain-containing-protein	unknown	unknown	gnl\|CDD\|378903
NZ_CP013476.1\|WP_068759262.1\|1348680_1349736_+\|hypothetical-protein	csn2	cd12217_csn2_CAS-II-A	gnl\|CDD\|213410
NZ_CP013476.1\|WP_055305277.1\|1341955_1343443_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP013476.1\|WP_055243496.1\|1357598_1357928_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055243488.1\|1341147_1341336_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013476.1\|WP_055243486.1\|1338813_1340046_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP013476.1\|WP_055275492.1\|1340226_1341075_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|223268
NZ_CP013476.1\|WP_068759263.1\|1353149_1353686_+\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP013476.1\|WP_055275505.1\|1359440_1360706_-\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
NZ_CP013476.1\|WP_055243497.1\|1358330_1358840_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|183384
NZ_CP013476.1\|WP_055305272.1\|1355264_1357502_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225110
NZ_CP013476.1\|WP_068759259.1\|1341357_1341606_-\|TIGR03905-family-TSCPD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378896
NZ_CP013476.1\|WP_055305273.1\|1353689_1354403_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341358
NZ_CP013476.1\|WP_068759260.1\|1343563_1346887_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187774
NZ_CP013476.1\|WP_068759265.1\|1360938_1362327_+\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP013476.1\|WP_068759257.1\|1336600_1337143_-\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|153100
NZ_CP013476.1\|WP_055275498.1\|1351219_1351591_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013476.1\|WP_055275499.1\|1351723_1353025_+\|alpha-amylase	gnl\|CDD\|200452	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes firmicutes, bacteroidetes, and proteobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.86612e-162
NZ_CP013476.1\|WP_068759261.1\|1348360_1348684_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.88816e-29
NZ_CP013476.1\|WP_144436988.1\|1338139_1338469_-\|DUF3784-domain-containing-protein	gnl\|CDD\|378903	pfam12650, DUF3784, Domain of unknown function (DUF3784). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 96 and 110 amino acids in length.	4.87509e-11
NZ_CP013476.1\|WP_068759262.1\|1348680_1349736_+\|hypothetical-protein	gnl\|CDD\|213410	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. This family of Csn2 proteins includes Stu0660, the proteins are larger than other (canonical) Csn2 proteins as they have an additional alpha-helical C-terminal domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.35257e-29
NZ_CP013476.1\|WP_055305277.1\|1341955_1343443_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP013476.1\|WP_055275505.1\|1359440_1360706_-\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	0
NZ_CP013476.1\|WP_055243486.1\|1338813_1340046_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP013476.1\|WP_055275492.1\|1340226_1341075_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	9.49659e-152
NZ_CP013476.1\|WP_068759263.1\|1353149_1353686_+\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	5.48445e-24
NZ_CP013476.1\|WP_055243497.1\|1358330_1358840_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|183384	PRK11924, PRK11924, RNA polymerase sigma factor; Provisional.	3.58232e-45
NZ_CP013476.1\|WP_068759259.1\|1341357_1341606_-\|TIGR03905-family-TSCPD-domain-containing-protein	gnl\|CDD\|378896	pfam12637, TSCPD, TSCPD domain. This family of proteins is found in bacteria, archaea and viruses. The domain is found in isolation in many proteins where it has a conserved C-terminal motif TSCPD after which the domain is named. Most copies of the domain possess 4 conserved cysteines that may be part of an Iron-sulfur cluster. This domain is found at the C-terminus of some ribonucleoside-diphosphate reductase enzymes.	1.07168e-43
NZ_CP013476.1\|WP_055305273.1\|1353689_1354403_+\|CBS-domain-containing-protein	gnl\|CDD\|341358	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	0.000611351
NZ_CP013476.1\|WP_068759260.1\|1343563_1346887_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	6.32008e-147
NZ_CP013476.1\|WP_068759265.1\|1360938_1362327_+\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP013476.1\|WP_068759257.1\|1336600_1337143_-\|rubrerythrin-family-protein	gnl\|CDD\|153100	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain. Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.	5.95377e-54
NZ_CP013476.1\|WP_055305272.1\|1355264_1357502_+\|EAL-domain-containing-protein	gnl\|CDD\|225110	COG2200, Rtn, c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms].	1.74732e-22

>NZ_CP013476.1|WP_068759262.1|1348680_1349736_+|hypothetical-protein
MINYYFRHPLIKPIEFSSADNFIQITGQNKKVQLYLKQIIEWSVLGHRYTELQIESLLNQELLWMINDKAIGKNDYRFLRINNREDLIYHLSGKKGSLGATYFNLINNNVDVVHYIDKINDLLELISIEYKKQNEKYDLNYEIDIKRINLNDITQQYFTFSFMDNGVYCIDFIESEYLMRAFIKILSILINDTEINYLLYLEDLSKLVPIEKVELLLNDLHQLSRKGQLTIISFGSTSSDLLIKKDLLETILICGDSECQPFYDWISIHNYLQCNYPCSFDIEDEKLLSYFKRIIPYLLSQDGQSYIPYDQSLVLFVLLNEGFYFHNYQQRYTPKLSRLEWNFLEEKLYKL
>NZ_CP013476.1|WP_068759261.1|1348360_1348684_+|CRISPR-associated-endonuclease-Cas2
MRYDVMRILCFFDLPTETAAEKRAYRQFRKLLLSNGFEMLQYSVYVRTCPNRQHAKKYYRILNQSAPKLGHIRLLMVTEKQFEEMALIIGVMSHQEEVIGVNKVVVI
>NZ_CP013476.1|WP_068759260.1|1343563_1346887_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MGYTLGLDIGIASVGFGLIDNVDGKILESGVRLFSSADPDNNQTRRSSRQARRLNRRKVHRLERVAHLLEEAGFEKGEVLAPTPYHLRVKGLTEKLSKPEVYAALYNLMKHRGISYLEDVELDEADSSSVSQNVELLKEYYPCEIQLERYEEYGQIRGIIETYNKDGEKESLVNIFPTGAYKKEAEAIILKQGQFYPELDKVFLEKFTEILTVKRPYYVGPGNKKSRTDYGIYRENGETLENLFDILIGKCTIYPQEARAAKFSYTAQLFDFLNDMNNISIAGEKLTEVQKREIYHQIMSSKTVNMMKIITKVTGCLKEEVTGYRVDSKYKAEFHSFASYRQFRNKMLDYGFDVQTLNVEMFDKLAAKLTLNTEYHQIITQLESLNLGLSKELIEKIADFRKKNRSLFSKWHSLSLKAMNEVVDELWSTSKNQMQIFSELGGFKSNIEVFKGLKYIPLDAMVDEIYNPVVRCSIRESIKIINALLKKYGALDKVVIEMPRDSNEKEEKDRITKLNKENDNKKKQAIEKARNEYGFGEEAYRQQNDLNTKLRLWYEQKQRCLYSGEIIKIFDLIKNPHLFDIDHIIPKSISYDDSLSNKVLCYATENREKGNLTPYRYFKRKASLTWNYEAYKSYVIELYKDGKGDLSRTKLELLLFEEDINKYEVRQRFINRNLVDTRYASKVVLNTLQDFMKENYPTTTVEVVRGKFTAQLRRHWGIRKNRDENHAHHAIDALIIACVPHLSLWKEQKKVFSTDEFRVDETTGEIIEQSYNQLTYQEPFSQFFYQLEKVSIDCRYSYKVDRKFNRQVADATIYSTRQGIVKQTSGDKSFTLDSNSKEHYVIAKIKNIYEDVDAKRFMDRYKKDKTQFLMYHHDPQTFSILEDVMKTYPDKKNPFQAYRLEYGPIRKYSKKGNGPQIQSIKYYDSKLGQHIELKQANQSTKKVVLQSLNPWRCDIYYNKKDKRYIAAGLKYADLSYQKGTGLYGISLQRYQQILNSEKIELSIEQIELLLEGRLNESNFEFCFSLYKNDFIQWNDENNQTFQYRFLARNLSSPNRIEVKPINKSKYDKQAEGLKTLKKGLNRFYKISVDVLGYQHFIKKEKLKLTFK
>NZ_CP013476.1|WP_055305277.1|1341955_1343443_+|lysine--tRNA-ligase
MSTTEINDQLQVRRDKMEDLRQNGIDPFGQRFDRTHLSSELVEEFGAFSKEELEEKEIEVAIAGRIRTKRGKGKAGFAHIQDVKGQVQIYVRQDAVGEEAYNFFTKADLGDIVGVRGVVFKTKVGELSIKVKEYTPLTKALRPLPEKYHGLTDVEERYRRRYVDLIMNEESKQTFITRTRVITAMRRYLDNLGYLEVETPILHTTLGGAAARPFETHHNTLDMDLYLRIATELHLKRLLVGGLEKVYEIGRIFRNEGISVRHNPEFTSIELYEAYGDMETMMDLTENMIAHIAQEVLGTTTVPYGGHEINLAVGWKRWHMVEAIKEITGVDFFKEMTFEEAKAIAKEHNVEVPAHFTGVGHIINEFFETFVEEKIVQPTFIYGHPVEVSPLAKKNAQDPRFTDRFELFIDAREYANAFTELNDPIDQKERFEAQLAEKALGNDEASEMDIDYIEALEYGMPPAGGLGIGIDRLVMLLTNSPTIRDVLLFPTMRKK
>NZ_CP013476.1|WP_068759259.1|1341357_1341606_-|TIGR03905-family-TSCPD-domain-containing-protein
METYKTTGVCAKEIQFEVEDNKIKSVNFIGGCPGNLIGISHLVKGMEVEEAINKLKGIPCRTKETSCPDQLAQALEKYLQQK
>NZ_CP013476.1|WP_055243488.1|1341147_1341336_+|hypothetical-protein
MSFKRMKGILALFWLVASIVIVVLDINGVINLARNNVLFFGVILSMFVSFQMINYFEKKKQK
>NZ_CP013476.1|WP_055275492.1|1340226_1341075_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MTTLIDGKKVSSQIRDKISQETAEFIEKTGIQPHLVVIIVGNNPASMTYVRNKKKSCEEVGFKSTVIELPVETTESELLTKIKELNEDPSVHGILVQLPLPKHISEEKVIATISVKKDVDGFHPYQVGALASGLDCLKPCTPSGVIELLKAYNIEMTGRHAVIVGRSHIVGKPLIQLLLDENATVTVCHSRTQDLAQFTKSADLLIVAIGRPNFITADMVKDGAVVIDVGINRLETGKLVGDVAFDEVEPKVSYITPVPGGVGPMTITMLLRNTLEAAKRLK
>NZ_CP013476.1|WP_055243486.1|1338813_1340046_+|serine-hydroxymethyltransferase
MKDTAIFEALQLELKRQRENVELIASENYVSEEVMAVQGSILTNKYAEGYPNKRYYGGCEFVDTIEDIARNRAKQLFGAKFANVQPHSGSQANMGAYRAVLEPGAKVLGMNLSHGGHLTHGHPLNFSGKDYEFYEYGVSDETETIDYEVVRQIALEVKPALIVAGASAYPRAIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHQNPMDYAHIVTTTTHKTLRGPRGGMVLTNDEEIATKLDKVVFPGIQGGPLMHVIGAKAVAFGEALTPDFVEYQKQVIKNAKVLAEELAKHGLRIVSGGTDNHLMLVDVKSTFGLTGKVAEAVLDRVAITCNKNTIPFDTEKPFVTSGIRLGTPAVTTRGFKEAEMIELAGYIAEALKYHEDEEKLAQIRQSVLGLTGRFPLYENR
>NZ_CP013476.1|WP_144436988.1|1338139_1338469_-|DUF3784-domain-containing-protein
MPLTIFTLIMAIFFFIFATIFALLKEKACLLISGYNFKSKKERLKYDEKRLSLDMRNNFITYGIIFVIGSIPTYFFGMWCFILTIIIWLIYFFKNVHLDDKKAFDKYKK
>NZ_CP013476.1|WP_068759257.1|1336600_1337143_-|rubrerythrin-family-protein
MNNLKGSKTEANLMHAFAGESMARNKYTYYAAKAQEEGYEQISNIFLETARNEMEHAKLWFKLLHEGEIADTMTNLKDAAAGENDEWTDMYATFAQQAREEGFNRIAALFEMVGKIEKHHEERYIQLLKNIEEGQVFEREEEIAWVCQECGHIHFGKKAPKVCPVCSYDQAHFEIRSENY
>NZ_CP013476.1|WP_055275498.1|1351219_1351591_+|hypothetical-protein
MLGLVIFPMLFFMIGFLFKVFRPYYKPAEFVFFNMMVAMVALVVANGATLFTTIPFFVQMALLHVGIYLAFAFVGLLTQNIYGWFNNRFPIIGGIGRGITMVALICVMMTACFSIQYILTLIY
>NZ_CP013476.1|WP_055275499.1|1351723_1353025_+|alpha-amylase
MAKDTNLSLRQSVIYQVYNRNHNESGTFRELIGDLERIKQLGVDILYLLPIHPIGKKDKKGELGCPYSIQNYREVNPEYGTLEDFKALIEATHKQGMKLMIDVVYNHTSRDSYLLNQHPEWFYLNKDGQFANRVGDWSDITDLDYSKDVALWDELIETLKYWAALGVDGYRCDVASFVPVEFWLRARREVAEINPDFIWLAESVDGGFINYIRSQGFEVHSDCEMYQAFDICYDYDVFAFYKDYLLGRAPLGEYIKRVQMQEVIYPGNYVKLRCLENHDQARIASLVKSVEQLKMWTAFVYLQKGATMIYAGQEALCTHTPSLFDIDKVDWLRYNEAGMADLMCQLASLKKDDIMRDGFYTIELGEVLDTVRLMYHTKVKKRIAIFNFGLKSGEVSVDTVDGEYKNLLTNEVIRVKAGKVMLTAEPIVFEANQ
>NZ_CP013476.1|WP_068759263.1|1353149_1353686_+|RNA-2',3'-cyclic-phosphodiesterase
MKRLFIGISFSTELKDYFKHAQLMVEKYCEVAKYTSYDNFHLTLKFLGMMEEASVNQLIEIINSIDVEKIILMLDHIGFFKKKNRYVIYMGTHPNEALTKVAMDLHDALVEARLVTQEEFIYTPHVTLCRNAKLLVPSVDLSRGIDIQKEMMIDNITLYESTNINGVLTYQPLYIREV
>NZ_CP013476.1|WP_055305273.1|1353689_1354403_+|CBS-domain-containing-protein
MVEQEGYLVFIESFNHIHKYLKKYTDSDDNVSFSDLLYKAKAHPMIHLYLDELHLFRKLRNIIVHQTDDFEKLIATPSDEVVERIKFIEQQLVDPSTVGVFKAEVIKFNATDSIEDVLKLSGEKEILKLPIYENNKFIGLVTSRAIAKWLQKHIQNNTIELSGTVKDLLDFEKKSQYEFIASSMTVYEAWHLFQASPKKLDALLLTESGRQEDVIEAVITYDDLLKYIYTHDQYVFN
>NZ_CP013476.1|WP_055305272.1|1355264_1357502_+|EAL-domain-containing-protein
MAEKVTRDALLSFFIDSCYLLENYRKVEGILYEQIEKDELELENILNDYRENQSFEWLIPMLIFASRYYSQQKANNVALKYLIECECILENLETDNLLKGYIFAELGYIYETKGVFKEADFYYMSAASFGSDKKIPLLTTYALERLIYIILVSCHRKSIERFQTFTADYQNQDISDYLKYQIELLRLYLSENYEEIILNIEPVDETQENTLLMKKAICAHSLFQLNRSDEIEWDLNLLELVASQQSDVYCLIYHLTYHLVHDNDEQLYDYITKLSNNLKGKQQNGWLRFVYQFLSQSCEGKLNEVEGSEFQDSLNKLTQQVSYQEQRLKHRMQGIYHNYRQYYNGIHLIRNKRKYKVVSWKQLPISYRYEYTSKTVVGYFKLDHCFYSDFNTSLLKQVIEMIDEFIGESITFSVEKEGLWFYFKACCSEIKLKRKLNRLVERWYEKLGQSYFVTFCLPQSTTDSFEETIERVKSSFYGMILKSRSKLSYEVNFCQEKFTRYNFSVKIHQLLEKANHIGEFTLNYSPLYYRDGHQLFGIECHNILDDYSILNQLPVEEREEASPFLNIEKEIYLFKLGCDYLKDYDEKNSVKLSLFIKFSRQTLLNKCLCSRILTHLKEDGIDPNQVIISVNEDILFEQNVLIQKAIKRLREFGVNIALDEYGAGALTGSIRNLSIDYLRISSCFIQYLKSSKNCLSMMNSLINVCMSKDVKICCSEIENESSLHLIRDFGIDVVSGSYYQRKLVV
>NZ_CP013476.1|WP_055243496.1|1357598_1357928_+|hypothetical-protein
MKQDMNMDLGIESFLEPDSDFIEELCEHLEGEGIHLTSELLVQILSKYEDHKFSFFKELIEQLVGADNMALPTDGGPAVIQVVMDGKRDRKQKDKDKDHLVDVDSTLLS
>NZ_CP013476.1|WP_055243497.1|1358330_1358840_+|sigma-70-family-RNA-polymerase-sigma-factor
MSLSTHEPVERLIETYGQEVYKIAYFYMKNTQLAEDVFQEVFYKVMKNYDKFQHQSSEKTWLIRITINTCKDMLRTSWIKRVTTFGVYQDSKNDYEKPFDIAQQETNRELYELIQKLPSKYKEVILLFYYKELSYEEISEILKIPEGTVRSRLSRARQKLKKMMNESEV
>NZ_CP013476.1|WP_068759264.1|1358843_1359401_+|hypothetical-protein
MDDQKIKSAMKLQLDSLEMDKQLKEKTLRYIMNEKPMLTSRLSWRWMSSGLGFVAVCLMAFILIPKVESTNHSLNLISTLNDDLSVNTRQVETPLDTLKMVMDQLNLTYRIGTPHIETSYTVTPIIVDDVKGYYVELSTTVDNFDVCSQTSLQVIRLGEKSLFLYADMQDELVESLIANYTILCR
>NZ_CP013476.1|WP_055275505.1|1359440_1360706_-|GTPase-HflX
MEEIIQRAILVGVDLNNDKNFDYSVEELKNLAEACSVQVVGVLTQKLERVNPACYIGTGKVDEVALLVEQNDANLVIFNDELSPSQIRNLEHGLQCKVIDRTILILDIFASRAKTREAQLQVEVAQLKYMMPRLIGLNASLSRQAGGIGSKGPGEKKLELDRRRIEEQVHKLNKELDSLVLARQNQRKLRKRNSTPVVALVGYTNAGKSTTMNALLTVSNAQSEKSVFEKNMLFATLETSTRHIQLPDNKQFLLTDTVGFVSKLPHQLVKAFRSTLEEVTEADLLLHVVDLSHPEFQTQIEITNKVLDELGVKETPMVYVYNKADLVEDEFTPSTKEAVRISAKNLTNIDTLIDCIKSHIFQHYVKASFLIPYDRGNLVSYLNEHANVFDTEYLENGTLITVECSEHDAHRLAEYKVKPLN
>NZ_CP013476.1|WP_068759265.1|1360938_1362327_+|DNA-repair-protein-RadA
MAKARTKTSFFCQQCGTESLKWVGRCPGCGEWNTMVEELKPTKAEQRRGFVASESMAKPQRLQEIETKEEARIQTSMSELNRVLGGGIVRGSLVLCGGEPGIGKSTLLLQTAQDLAHKNVQVLYVSGEESARQIKLRAERLGVSSEHLYIYAETDLTLIERQIQQLKPEFVIIDSIQTIHMPEVTSAPGSVSQVRECTAQLMKIAKIGGISVFIVGHVTKDGNIAGPRLLEHMVDTVLYFEGDRHHTYRILRAVKNRFGSTNEIGIFDMKEEGLDEVTNASEVFLEDRTKGLPGTAIMASIEGTRPILVEIQSLLTPTSFGNPKRMASGVDHNRVSLILAVLEKRMGFFLQNQDTYVKVTGGVKLDEPAVDLAIVASIVSSYKDKMTPSGDVYMGEVGLTGEIRRVSRIEERVKEAKKLGFTRAIIPKKNIGGWTAPKGMEIVGVDTISDALKAMFKDDLKF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013476_1	1.1\|1032587\|26\|NZ_CP013476\|CRISPRCasFinder	1032587-1032612	26	NZ_CP013476.1	1882416-1882441	0	1.0
NZ_CP013476_2	2.1\|1196542\|42\|NZ_CP013476\|CRT	1196542-1196583	42	NZ_CP013476.1	1196686-1196727	0	1.0
NZ_CP013476_2	2.2\|1196602\|18\|NZ_CP013476\|CRT	1196602-1196619	18	NZ_CP013476.1	1196710-1196727	0	1.0
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP013476.1	1196710-1196739	0	1.0
NZ_CP013476_2	2.4\|1196686\|18\|NZ_CP013476\|CRT	1196686-1196703	18	NZ_CP013476.1	1196710-1196727	0	1.0
NZ_CP013476_1	1.1\|1032587\|26\|NZ_CP013476\|CRISPRCasFinder	1032587-1032612	26	NZ_CP013476.1	1882365-1882390	1	0.962
NZ_CP013476_2	2.2\|1196602\|18\|NZ_CP013476\|CRT	1196602-1196619	18	NZ_CP013476.1	885058-885075	2	0.889
NZ_CP013476_2	2.4\|1196686\|18\|NZ_CP013476\|CRT	1196686-1196703	18	NZ_CP013476.1	885058-885075	2	0.889

1. spacer 1.1|1032587|26|NZ_CP013476|CRISPRCasFinder matches to position: 1882416-1882441, mismatch: 0, identity: 1.0

aactgctagggcttgggtcacctagc	CRISPR spacer
aactgctagggcttgggtcacctagc	Protospacer
**************************

2. spacer 2.1|1196542|42|NZ_CP013476|CRT matches to position: 1196686-1196727, mismatch: 0, identity: 1.0

tcaaaacctgaatcaaaacctgaatcaaaacctgaatcaaaa	CRISPR spacer
tcaaaacctgaatcaaaacctgaatcaaaacctgaatcaaaa	Protospacer
******************************************

3. spacer 2.2|1196602|18|NZ_CP013476|CRT matches to position: 1196710-1196727, mismatch: 0, identity: 1.0

tcaaaacctgaatcaaaa	CRISPR spacer
tcaaaacctgaatcaaaa	Protospacer
******************

4. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to position: 1196710-1196739, mismatch: 0, identity: 1.0

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tcaaaacctgaatcaaaacctgaagataaa	Protospacer
******************************

5. spacer 2.4|1196686|18|NZ_CP013476|CRT matches to position: 1196710-1196727, mismatch: 0, identity: 1.0

tcaaaacctgaatcaaaa	CRISPR spacer
tcaaaacctgaatcaaaa	Protospacer
******************

6. spacer 1.1|1032587|26|NZ_CP013476|CRISPRCasFinder matches to position: 1882365-1882390, mismatch: 1, identity: 0.962

aactgctagggcttgggtcacctagc	CRISPR spacer
aactggtagggcttgggtcacctagc	Protospacer
***** ********************

7. spacer 2.2|1196602|18|NZ_CP013476|CRT matches to position: 885058-885075, mismatch: 2, identity: 0.889

tcaaaacctgaatcaaaa	CRISPR spacer
tcaaaacgcgaatcaaaa	Protospacer
******* .*********

8. spacer 2.4|1196686|18|NZ_CP013476|CRT matches to position: 885058-885075, mismatch: 2, identity: 0.889

tcaaaacctgaatcaaaa	CRISPR spacer
tcaaaacgcgaatcaaaa	Protospacer
******* .*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	443714-443743	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	82775-82804	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	433594-433623	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	62920-62949	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	82211-82240	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	119884-119913	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	124107-124136	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	119809-119838	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	82493-82522	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	76766-76795	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	87010-87039	3	0.9
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	433582-433611	5	0.833
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_011777	Bacillus cereus AH820 plasmid pAH820_272, complete sequence	68734-68763	5	0.833
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_KY940428	UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence	75191-75220	5	0.833
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	280910-280939	5	0.833
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	263911-263940	5	0.833
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_014723	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence	119796-119824	5	0.828
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	319662-319691	5	0.833
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	353998-354027	5	0.833
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP036355	Bacillus sp. SYJ plasmid unnamed1, complete sequence	79991-80020	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP036355	Bacillus sp. SYJ plasmid unnamed1, complete sequence	80027-80056	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	360835-360864	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	186051-186080	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	MH617072	Inoviridae sp. isolate ctci24, complete genome	3133-3162	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	181022-181051	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_KX258624	Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence	95114-95143	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_010469	Leuconostoc citreum KM20 plasmid pLCK4, complete sequence	9076-9105	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP043526	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence	19278-19307	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_017496	Lactococcus lactis subsp. cremoris A76 plasmid pQA554, complete sequence	11283-11312	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP021494	Leuconostoc mesenteroides strain WiKim33 plasmid unnamed3, complete sequence	11803-11832	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_016971	Lactococcus garvieae 21881 plasmid pGL4 complete sequence	6824-6853	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_015756	Weissella koreensis KACC 15510 plasmid WKp2903, complete sequence	8507-8536	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_KX138409	Lactococcus lactis strain NCDO712 plasmid pNZ712, complete sequence	22935-22964	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_KM007160	Lactococcus garvieae strain IPLA 31405 plasmid pLG42, complete sequence	27778-27807	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP028258	Leuconostoc mesenteroides strain SRCM102735 plasmid unnamed3, complete sequence	1733-1762	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP042397	Leuconostoc citreum strain CBA3623 plasmid unnamed4, complete sequence	15458-15487	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_009137	Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pDBORO, complete sequence	12386-12415	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_017484	Lactococcus lactis subsp. lactis CV56 plasmid pCV56C, complete sequence	19049-19078	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP021493	Leuconostoc mesenteroides strain WiKim33 plasmid unnamed2, complete sequence	9284-9313	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP016699	Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence	80909-80938	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP016700	Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence	12227-12256	6	0.8
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	523402-523430	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1209811-1209839	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1180304-1180332	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	352624-352652	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	512178-512206	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1276034-1276062	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	106027-106055	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	517083-517111	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	509826-509854	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	782749-782777	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1361291-1361319	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1176730-1176758	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	865510-865538	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	770176-770204	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	898501-898529	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	395859-395887	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	420113-420141	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1298619-1298647	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	497839-497867	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	533615-533643	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1350550-1350578	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1122850-1122878	6	0.793
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1209817-1209845	6	0.793
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_014723	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence	119796-119825	6	0.8
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	113045-113074	6	0.8
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP042928	Bacillus cereus strain G1-1 plasmid unnamed, complete sequence	69233-69262	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP040341	Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence	234014-234043	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	KJ019069	Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome	94008-94037	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_031900	Synechococcus phage S-CAM4 isolate 0809SB33, complete genome	94027-94056	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	KU686202	Synechococcus phage S-CAM4 isolate 1010NB23, complete genome	94085-94114	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	KU686200	Synechococcus phage S-CAM4 isolate 0309CC44, complete genome	94002-94031	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP011933	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP plasmid pLIMLP1, complete sequence	57983-58012	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP039286	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence	4574-4603	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP039286	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence	83025-83054	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_025151	Leptospira interrogans serovar Lai str. 56601 plasmid Laicp, complete sequence	53929-53958	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP006725	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence	54703-54732	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	AP013877	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C117A-MedDCM-OCT-S27-C30, * SEQUENCING IN PROGRESS *	11003-11032	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP039285	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence	120901-120930	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP043040	Leptospira interrogans serovar Hardjo strain L53 plasmid p1	33474-33503	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP044516	Leptospira interrogans serovar Canicola strain 611 plasmid p2, complete sequence	2059-2088	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NC_025197	Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui2, complete sequence	2059-2088	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP044512	Leptospira interrogans serovar Canicola strain LJ178 plasmid p2, complete sequence	2059-2088	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	AP013511	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C117A-MedDCM-OCT-S32-C49	526-555	7	0.767
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	319662-319690	7	0.759
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	353999-354027	7	0.759
NZ_CP013476_3	3.2\|1349890\|29\|NZ_CP013476\|PILER-CR	1349890-1349918	29	NZ_CP025807	Sulfitobacter sp. SK012 plasmid unnamed4, complete sequence	21753-21781	7	0.759
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1209811-1209840	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1180304-1180333	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	352624-352653	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1276034-1276063	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	782749-782778	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1361291-1361320	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	898501-898530	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	420113-420142	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	497839-497868	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1350550-1350579	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1122850-1122879	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1209817-1209846	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	523401-523430	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	512177-512206	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	106026-106055	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	517082-517111	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	509825-509854	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1176729-1176758	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	865509-865538	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	770175-770204	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	395858-395887	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1298618-1298647	7	0.767
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	533614-533643	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	85657-85686	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	123584-123613	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP025497	Staphylococcus aureus subsp. aureus strain 3020.C01 plasmid p3020.C01b, complete sequence	53609-53638	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP017467	Staphylococcus nepalensis strain JS11 plasmid pSNJS1101, complete sequence	5287-5316	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP016860	Staphylococcus aureus subsp. aureus strain 1969.N plasmid p1969.Nb, complete sequence	53609-53638	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP012121	Staphylococcus aureus subsp. aureus strain USA300_2014.C02 plasmid pC02, complete sequence	53644-53673	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	MN909556	Staphylococcus saprophyticus strain 1005578 plasmid p1005578_vga, complete sequence	28401-28430	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP054441	Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-1, complete sequence	26796-26825	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP054445	Staphylococcus saprophyticus strain UTI-056 plasmid pUTI-056-1, complete sequence	27223-27252	7	0.767
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP042047	Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence	37492-37521	7	0.767
NZ_CP013476_3	3.10\|1350219\|29\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350219-1350247	29	MH029534	Myoviridae environmental samples clone NHS-Seq2, complete sequence	16641-16669	7	0.759
NZ_CP013476_3	3.11\|1350284\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350284-1350313	30	NC_018532	Arthrobacter sp. Rue61a plasmid p232, complete sequence	81891-81920	7	0.767
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	CP000876	Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence	277199-277228	7	0.767
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	NZ_CP050077	Enterobacter kobei strain 070 plasmid p070_C, complete sequence	1550-1579	7	0.767
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	332514-332543	7	0.767
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	101172-101201	7	0.767
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	NZ_CP024485	Klebsiella pneumoniae strain INF322 plasmid unnamed3, complete sequence	893-922	7	0.767
NZ_CP013476_3	3.19\|1350812\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350812-1350841	30	NZ_CP024415	Lactobacillus plantarum strain ATCC 8014 plasmid pLP39, complete sequence	5520-5549	7	0.767
NZ_CP013476_3	3.19\|1350812\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350812-1350841	30	MG788324	Lactobacillus phage PM411, complete genome	44307-44336	7	0.767
NZ_CP013476_3	3.20\|1350878\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350878-1350907	30	MT774382	CrAssphage cr10_1, complete genome	75906-75935	7	0.767
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	371789-371818	8	0.733
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP017773	Paenibacillus crassostreae strain LPB0068 plasmid pPC03, complete sequence	34052-34081	8	0.733
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_CP026096	Bacillus asahii strain OM18 plasmid pOM18, complete sequence	19917-19946	8	0.733
NZ_CP013476_3	3.1\|1349824\|29\|NZ_CP013476\|PILER-CR	1349824-1349852	29	NZ_CP021745	Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence	111811-111839	8	0.724
NZ_CP013476_3	3.4\|1349824\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349824-1349853	30	NZ_CP021745	Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence	111811-111840	8	0.733
NZ_CP013476_3	3.5\|1349890\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1349890-1349919	30	NZ_CP025807	Sulfitobacter sp. SK012 plasmid unnamed4, complete sequence	21752-21781	8	0.733
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP025472	Enterococcus mundtii strain Pe161 plasmid pPe16101, complete sequence	51106-51135	8	0.733
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP031260	Klebsiella quasipneumoniae strain L22 plasmid pL22-3, complete sequence	27303-27332	8	0.733
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP029067	Enterococcus mundtii strain Pe103 plasmid pPe10301, complete sequence	28768-28797	8	0.733
NZ_CP013476_3	3.8\|1350088\|30\|NZ_CP013476\|CRISPRCasFinder,CRT	1350088-1350117	30	NZ_CP029067	Enterococcus mundtii strain Pe103 plasmid pPe10301, complete sequence	38438-38467	8	0.733
NZ_CP013476_3	3.15\|1350548\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350548-1350577	30	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	99302-99331	8	0.733
NZ_CP013476_3	3.17\|1350680\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350680-1350709	30	NZ_CP054577	Staphylococcus saprophyticus strain UTI-050 plasmid pUTI-050-2, complete sequence	5630-5659	8	0.733
NZ_CP013476_3	3.20\|1350878\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350878-1350907	30	AP014140	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4A-MedDCM-OCT-S37-C62, * SEQUENCING IN PROGRESS *	419-448	8	0.733
NZ_CP013476_3	3.20\|1350878\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350878-1350907	30	AP014122	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4-MedDCM-OCT-S43-C68, * SEQUENCING IN PROGRESS *	33361-33390	8	0.733
NZ_CP013476_3	3.20\|1350878\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350878-1350907	30	AP014141	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4A-MedDCM-OCT-S46-C72, * SEQUENCING IN PROGRESS *	33185-33214	8	0.733
NZ_CP013476_3	3.20\|1350878\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350878-1350907	30	NZ_CP013691	Myroides odoratimimus strain PR63039 plasmid p63039, complete sequence	40146-40175	8	0.733
NZ_CP013476_2	2.3\|1196638\|30\|NZ_CP013476\|CRT	1196638-1196667	30	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	39255-39284	9	0.7
NZ_CP013476_3	3.19\|1350812\|30\|NZ_CP013476\|CRISPRCasFinder,CRT,PILER-CR	1350812-1350841	30	MN694059	Marine virus AFVG_250M105, complete genome	41421-41450	9	0.7

1. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

2. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

3. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
acaaaacctgaaacaaaacctgaagaaaaa	Protospacer
 *********** ************* ***

4. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

5. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

6. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

7. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

8. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

9. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

10. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

11. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 3, identity: 0.9

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaagaaaaa	Protospacer
.*********** ************* ***

12. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 5, identity: 0.833

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaaacaaaa	Protospacer
.*********** ***********.  ***

13. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 5, identity: 0.833

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaaacaaaa	Protospacer
.*********** ***********.  ***

14. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 5, identity: 0.833

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaaacaaaa	Protospacer
.*********** ***********.  ***

15. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaaacaaaa	Protospacer
.*********** ***********.  ***

16. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaacctgaaacaaaa	Protospacer
.*********** ***********.  ***

17. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_014723 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence) position: , mismatch: 5, identity: 0.828

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
cgtagcgatcgacggcgtgaaatttatca	Protospacer
*****.***************** *.  *

18. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 5, identity: 0.833

cgtagtgatcgacggcgtgaaa---tatgagag	CRISPR spacer
cgtagcgatcgacggcgtgaaagtctatca---	Protospacer
*****.****************   *** *

19. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 5, identity: 0.833

cgtagtgatcgacggcgtgaaa---tatgagag	CRISPR spacer
cgtagcgatcgacggcgtgaaagtctatca---	Protospacer
*****.****************   *** *

20. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaaccagaagtaaag	Protospacer
.*********** ******* ****  **.

21. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaaccagaagtaaag	Protospacer
.*********** ******* ****  **.

22. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaaccagaagtgaag	Protospacer
.*********** ******* ****  **.

23. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaaaccagaagtgaag	Protospacer
.*********** ******* ****  **.

24. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to MH617072 (Inoviridae sp. isolate ctci24, complete genome) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
gcggaaccagaaccaaaacctgaagataat	Protospacer
 *..**** ***.****************

25. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaagcctgaaacaaaa	Protospacer
.*********** ****.******.  ***

26. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_KX258624 (Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaagaaaaacctgaaacgaaa	Protospacer
.***********  **********.  ***

27. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_010469 (Leuconostoc citreum KM20 plasmid pLCK4, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

28. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP043526 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_02, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

29. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_017496 (Lactococcus lactis subsp. cremoris A76 plasmid pQA554, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

30. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP021494 (Leuconostoc mesenteroides strain WiKim33 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

31. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_016971 (Lactococcus garvieae 21881 plasmid pGL4 complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

32. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_015756 (Weissella koreensis KACC 15510 plasmid WKp2903, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

33. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_KX138409 (Lactococcus lactis strain NCDO712 plasmid pNZ712, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

34. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_KM007160 (Lactococcus garvieae strain IPLA 31405 plasmid pLG42, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

35. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP028258 (Leuconostoc mesenteroides strain SRCM102735 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

36. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP042397 (Leuconostoc citreum strain CBA3623 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

37. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_009137 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pDBORO, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

38. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_017484 (Lactococcus lactis subsp. lactis CV56 plasmid pCV56C, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

39. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP021493 (Leuconostoc mesenteroides strain WiKim33 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

40. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

41. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP016700 (Lactococcus lactis subsp. lactis strain 275 plasmid p275B, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttagagcggaattaaaacctgaagataaa	Protospacer
*. *.* * ****.****************

42. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

43. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

44. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

45. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
cgtcgtgatcgacggcgtgaacttcctga	Protospacer
*** ***************** * .  **

46. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

47. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

48. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

49. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

50. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

51. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

52. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
agtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

53. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

54. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

55. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

56. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

57. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

58. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

59. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

60. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

61. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

62. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

63. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

64. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.793

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgc	Protospacer
 ** *******.************ * *

65. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_014723 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence) position: , mismatch: 6, identity: 0.8

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
cgtagcgatcgacggcgtgaaatttatcac	Protospacer
*****.***************** *.  *

66. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 6, identity: 0.8

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
accgccatcacaaccgccatcaccatcatc	Protospacer
*   *********.******** ***** *

67. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaagcctgaaacaaag	Protospacer
.*********** ****.******.  **.

68. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacaaagcctgaaacaaag	Protospacer
.*********** ****.******.  **.

69. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to KJ019069 (Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa---	CRISPR spacer
ccaaaacctgtatcaaaacct---gatccacct	Protospacer
.********* **********   ***  *

70. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_031900 (Synechococcus phage S-CAM4 isolate 0809SB33, complete genome) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa---	CRISPR spacer
ccaaaacctgtatcaaaacct---gatccacct	Protospacer
.********* **********   ***  *

71. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to KU686202 (Synechococcus phage S-CAM4 isolate 1010NB23, complete genome) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa---	CRISPR spacer
ccaaaacctgtatcaaaacct---gatccacct	Protospacer
.********* **********   ***  *

72. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to KU686200 (Synechococcus phage S-CAM4 isolate 0309CC44, complete genome) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa---	CRISPR spacer
ccaaaacctgtatcaaaacct---gatccacct	Protospacer
.********* **********   ***  *

73. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP011933 (Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP plasmid pLIMLP1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

74. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

75. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

76. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_025151 (Leptospira interrogans serovar Lai str. 56601 plasmid Laicp, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

77. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP006725 (Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

78. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to AP013877 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C117A-MedDCM-OCT-S27-C30, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tcaaaacctgaatcaaagccagatcctcca	Protospacer
*****************.** **   *  *

79. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP039285 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

80. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP043040 (Leptospira interrogans serovar Hardjo strain L53 plasmid p1) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

81. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP044516 (Leptospira interrogans serovar Canicola strain 611 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

82. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NC_025197 (Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

83. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP044512 (Leptospira interrogans serovar Canicola strain LJ178 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
aaaaaacttgaatcaaaacctgatcattca	Protospacer
  *****.***************  **  *

84. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to AP013511 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C117A-MedDCM-OCT-S32-C49) position: , mismatch: 7, identity: 0.767

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tcaaaacctgaatcaaagccagatcctcca	Protospacer
*****************.** **   *  *

85. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 7, identity: 0.759

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
cgtagcgatcgacggcgtgaaagtctatc	Protospacer
*****.****************  . *

86. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 7, identity: 0.759

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
cgtagcgatcgacggcgtgaaagtctatc	Protospacer
*****.****************  . *

87. spacer 3.2|1349890|29|NZ_CP013476|PILER-CR matches to NZ_CP025807 (Sulfitobacter sp. SK012 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.759

cgtagtgatcgacggcgtgaaatatgaga	CRISPR spacer
aattcagatcaacggcgtgaaatatgaca	Protospacer
 .*   ****.**************** *

88. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

89. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

90. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
cgtcgtgatcgacggcgtgaacttcctgaa	Protospacer
*** ***************** * .  **.

91. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

92. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

93. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
agtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

94. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

95. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

96. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

97. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

98. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

99. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

100. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

101. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

102. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

103. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

104. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

105. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

106. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

107. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

108. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

109. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

110. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
ggtcgtgatcggcggcgtgaaataggcgct	Protospacer
 ** *******.************ * *

111. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
agaaccatatgaaacaattgagggaaataa	Protospacer
 *  *******************.**   *

112. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
agaaccatatgaaacaattgagggaaataa	Protospacer
 *  *******************.**   *

113. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP025497 (Staphylococcus aureus subsp. aureus strain 3020.C01 plasmid p3020.C01b, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattaga	Protospacer
***************** ***.. * .* *

114. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP017467 (Staphylococcus nepalensis strain JS11 plasmid pSNJS1101, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattaga	Protospacer
***************** ***.. * .* *

115. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP016860 (Staphylococcus aureus subsp. aureus strain 1969.N plasmid p1969.Nb, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattaga	Protospacer
***************** ***.. * .* *

116. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP012121 (Staphylococcus aureus subsp. aureus strain USA300_2014.C02 plasmid pC02, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattaga	Protospacer
***************** ***.. * .* *

117. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to MN909556 (Staphylococcus saprophyticus strain 1005578 plasmid p1005578_vga, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaagtgaaacattaga	Protospacer
***************** ***.. * .* *

118. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP054441 (Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaagtgaaacattaga	Protospacer
***************** ***.. * .* *

119. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP054445 (Staphylococcus saprophyticus strain UTI-056 plasmid pUTI-056-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaagtgaaacattaga	Protospacer
***************** ***.. * .* *

120. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP042047 (Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence) position: , mismatch: 7, identity: 0.767

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattaga	Protospacer
***************** ***.. * .* *

121. spacer 3.10|1350219|29|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to MH029534 (Myoviridae environmental samples clone NHS-Seq2, complete sequence) position: , mismatch: 7, identity: 0.759

tagcttagagttgatcgcgtcagcggtat	CRISPR spacer
gtgcgcagagttgatcgcgccagcggtta	Protospacer
  ** .*************.*******

122. spacer 3.11|1350284|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NC_018532 (Arthrobacter sp. Rue61a plasmid p232, complete sequence) position: , mismatch: 7, identity: 0.767

gagagtttaaaatccctggcaaggcacaag	CRISPR spacer
gagagtttcaagtccctggcaagaacgatg	Protospacer
******** **.***********.   * *

123. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to CP000876 (Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence) position: , mismatch: 7, identity: 0.767

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
ttggtcaccaaaatcgccatcaacatcaag	Protospacer
  * .**.** ******************

124. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050077 (Enterobacter kobei strain 070 plasmid p070_C, complete sequence) position: , mismatch: 7, identity: 0.767

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
aacctcctcataatcgccatcaacatcatc	Protospacer
*. ..* ***.***************** *

125. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 7, identity: 0.767

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
tcgggcatcacaatggccatcaccatcagc	Protospacer
  *  ********* ******* *****.*

126. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
atcaccatcaccatcgccatcaccatcgcc	Protospacer
*   ******* ********** ****. *

127. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024485 (Klebsiella pneumoniae strain INF322 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
aacctcctcataatcgccatcaacatcatc	Protospacer
*. ..* ***.***************** *

128. spacer 3.19|1350812|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024415 (Lactobacillus plantarum strain ATCC 8014 plasmid pLP39, complete sequence) position: , mismatch: 7, identity: 0.767

tgacttttgagttagtaccatcagcggtat	CRISPR spacer
acaatgttgagttaattccatcagcggtaa	Protospacer
  * * ********.* ************

129. spacer 3.19|1350812|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to MG788324 (Lactobacillus phage PM411, complete genome) position: , mismatch: 7, identity: 0.767

tgacttttgagttagtaccatcagcggtat	CRISPR spacer
ataatgttgagttaattccatcagcggtaa	Protospacer
  * * ********.* ************

130. spacer 3.20|1350878|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to MT774382 (CrAssphage cr10_1, complete genome) position: , mismatch: 7, identity: 0.767

cttttttatttgataaggctaagaatgggg	CRISPR spacer
tctctttattttataaggcaaagaatgaag	Protospacer
..*.******* ******* *******..*

131. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.733

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
ccaaaacctgaaacgaaacctgaattacca	Protospacer
.*********** *.*********     *

132. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP017773 (Paenibacillus crassostreae strain LPB0068 plasmid pPC03, complete sequence) position: , mismatch: 8, identity: 0.733

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
tttgtacctgaatcagaacttgaagatagt	Protospacer
*. . **********.***.********.

133. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_CP026096 (Bacillus asahii strain OM18 plasmid pOM18, complete sequence) position: , mismatch: 8, identity: 0.733

tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
gtaaaacctgaaccaaatcctgaagtttct	Protospacer
 .**********.**** ******* *

134. spacer 3.1|1349824|29|NZ_CP013476|PILER-CR matches to NZ_CP021745 (Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence) position: , mismatch: 8, identity: 0.724

ttatttgaataatctaagttagtcggatt	CRISPR spacer
ttatttgaaaaatctaagttatcagaggg	Protospacer
********* *********** . *..

135. spacer 3.4|1349824|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP021745 (Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence) position: , mismatch: 8, identity: 0.733

ttatttgaataatctaagttagtcggattt	CRISPR spacer
ttatttgaaaaatctaagttatcagagggt	Protospacer
********* *********** . *..  *

136. spacer 3.5|1349890|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP025807 (Sulfitobacter sp. SK012 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

cgtagtgatcgacggcgtgaaatatgagag	CRISPR spacer
aattcagatcaacggcgtgaaatatgacat	Protospacer
 .*   ****.**************** *

137. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP025472 (Enterococcus mundtii strain Pe161 plasmid pPe16101, complete sequence) position: , mismatch: 8, identity: 0.733

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
cgtaccatatgaaacaattgaagaggcgtt	Protospacer
.** *****************.**..*..

138. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP031260 (Klebsiella quasipneumoniae strain L22 plasmid pL22-3, complete sequence) position: , mismatch: 8, identity: 0.733

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
tgttccatatgaaacaaatgaaacattgga	Protospacer
***************** ***.. * .. *

139. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP029067 (Enterococcus mundtii strain Pe103 plasmid pPe10301, complete sequence) position: , mismatch: 8, identity: 0.733

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
cgtaccatatgaaacaattgaagaggcgtt	Protospacer
.** *****************.**..*..

140. spacer 3.8|1350088|30|NZ_CP013476|CRISPRCasFinder,CRT matches to NZ_CP029067 (Enterococcus mundtii strain Pe103 plasmid pPe10301, complete sequence) position: , mismatch: 8, identity: 0.733

tgttccatatgaaacaattgaggaaacaca	CRISPR spacer
cgtaccatatgaaacaattgaagaggcgtt	Protospacer
.** *****************.**..*..

141. spacer 3.15|1350548|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.733

aggtccatcacaatcgccatcaacatcaac	CRISPR spacer
gcgagcatcacaatcaccatgaacatcacg	Protospacer
. *  **********.**** *******

142. spacer 3.17|1350680|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054577 (Staphylococcus saprophyticus strain UTI-050 plasmid pUTI-050-2, complete sequence) position: , mismatch: 8, identity: 0.733

gttcttgatcgaataaatgatgattcgata	CRISPR spacer
tataaaaatctaataaatgatgattcaata	Protospacer
  *   .*** ***************.***

143. spacer 3.20|1350878|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to AP014140 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4A-MedDCM-OCT-S37-C62, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cttttttatttgataaggctaagaatgggg	CRISPR spacer
gttttttagtagataaggctaagaaaacaa	Protospacer
 ******* * ************** . ..

144. spacer 3.20|1350878|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to AP014122 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4-MedDCM-OCT-S43-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cttttttatttgataaggctaagaatgggg	CRISPR spacer
gttttttagtagataaggctaagaaaacaa	Protospacer
 ******* * ************** . ..

145. spacer 3.20|1350878|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to AP014141 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4A-MedDCM-OCT-S46-C72, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cttttttatttgataaggctaagaatgggg	CRISPR spacer
gttttttagtagataaggctaagaaaacaa	Protospacer
 ******* * ************** . ..

146. spacer 3.20|1350878|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013691 (Myroides odoratimimus strain PR63039 plasmid p63039, complete sequence) position: , mismatch: 8, identity: 0.733

cttttttatttgataaggctaagaatgggg	CRISPR spacer
tgtttttatttgaaaaggataagaaaagta	Protospacer
. *********** **** ****** .* .

147. spacer 2.3|1196638|30|NZ_CP013476|CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

----tcaaaacctgaatcaaaacctgaagataaa	CRISPR spacer
attactgga----gaatcaatacctgaagataaa	Protospacer
    ....*    ******* *************

148. spacer 3.19|1350812|30|NZ_CP013476|CRISPRCasFinder,CRT,PILER-CR matches to MN694059 (Marine virus AFVG_250M105, complete genome) position: , mismatch: 9, identity: 0.7

tgacttttgagttagtaccatcagcggtat	CRISPR spacer
aagaagttcagttagtaccatcagcgctac	Protospacer
 ..   ** ***************** **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

746795 : 754519

Escherichia_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068759056.1\|746795_747917_-	hypothetical protein	A0A2R3ZXV6	Staphylococcus_phage	5.8e-15	33.5
WP_068759057.1\|748425_748929_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A097EY85	Escherichia_phage	1.5e-31	45.7
WP_082704870.1\|749153_750113_-	ribonucleoside-triphosphate reductase	E5DPW8	Aeromonas_phage	7.1e-78	45.7
WP_068759058.1\|750402_750762_-	hypothetical protein	C4MYM7	Escherichia_phage	1.6e-11	50.0
WP_068759059.1\|751040_751796_-	GIY-YIG nuclease family protein	G9J202	Bacillus_phage	6.7e-15	41.7
WP_068759061.1\|752512_754519_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	1.0e-30	26.5

DBSCAN-SWA_2

836705 : 842792

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068759108.1\|836705_837233_-	adenine phosphoribosyltransferase	A0A1X9I6E2	Streptococcus_phage	5.6e-93	99.4
WP_002294505.1\|837276_838140_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	A0A1X9I6F2	Streptococcus_phage	8.7e-168	100.0
WP_068759109.1\|838172_838907_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	2.9e-140	99.6
WP_068759110.1\|838887_839757_-	nucleotidyltransferase domain-containing protein	A0A1X9I6C9	Streptococcus_phage	4.5e-156	93.8
WP_068759111.1\|839988_841452_-	Msr family ABC-F type ribosomal protection protein	A0A1B0RXA0	Streptococcus_phage	7.1e-239	89.5
WP_068759112.1\|841565_842792_-	macrolide efflux MFS transporter Mef(A)	A0A1B0RXG2	Streptococcus_phage	1.1e-208	95.6

DBSCAN-SWA_3

919079 : 961074

Streptococcus_phage(36.36%)

transposase,tRNA,integrase

attL 918952:918967|attR 964684:964699

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
918952:918967	attL	NA	NA	NA	NA
WP_144436951.1\|919079_919526_+\|transposase	transposase	NA	NA	NA	NA
WP_068759143.1\|921799_922015_-\|transposase	transposase	A0A1P8CWP5	Bacillus_phage	8.0e-14	51.5
WP_068759144.1\|922319_922997_-	hypothetical protein	NA	NA	NA	NA
WP_068759145.1\|923029_924868_-	NERD domain-containing protein	NA	NA	NA	NA
WP_144436952.1\|925225_925402_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144436953.1\|925425_925587_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_082704881.1\|925914_926424_+\|transposase	transposase	NA	NA	NA	NA
WP_068759147.1\|926503_926923_+\|transposase	transposase	NA	NA	NA	NA
WP_068759148.1\|927132_929100_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.2e-95	39.4
WP_055275310.1\|929390_929786_+	hypothetical protein	NA	NA	NA	NA
WP_068759149.1\|929811_930270_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_068759150.1\|930499_931726_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068759151.1\|933098_934229_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	2.5e-37	32.9
WP_055243523.1\|934251_935106_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.9e-68	50.0
WP_068759152.1\|935151_935739_-	zinc dependent phospholipase C family protein	NA	NA	NA	NA
WP_068759765.1\|935755_937276_-	cardiolipin synthase	NA	NA	NA	NA
WP_055243525.1\|937366_938155_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_068759153.1\|938529_939390_-	stage 0 sporulation family protein	NA	NA	NA	NA
WP_055306016.1\|939392_940373_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.0e-24	29.4
WP_068759154.1\|940403_941033_-	dTMP kinase	M1PSC7	Streptococcus_phage	3.3e-52	49.5
WP_068759155.1\|941186_942173_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_055243379.1\|942532_942871_-	hypothetical protein	NA	NA	NA	NA
WP_055275232.1\|943040_943808_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_055275312.1\|943819_944608_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_068759156.1\|944614_945472_-	energy-coupling factor ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.1e-13	26.7
WP_082411189.1\|945447_946269_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.6e-20	32.7
WP_055275240.1\|946316_946682_-	NusG domain II-containing protein	NA	NA	NA	NA
WP_055275242.1\|946841_948563_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-62	33.3
WP_055275244.1\|948607_949171_-	peroxiredoxin	NA	NA	NA	NA
WP_068758944.1\|950115_951411_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-56	34.0
WP_002576318.1\|959862_961074_-\|integrase	site-specific integrase	U3PCM7	Lactobacillus_phage	1.4e-06	21.7
964684:964699	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2317458 : 2351748

Bacillus_phage(20.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_055275811.1\|2317458_2317899_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_068759597.1\|2317901_2318798_+	SH3 domain-containing protein	A0A218KC88	Bacillus_phage	1.2e-55	40.7
WP_068759598.1\|2319245_2319920_+	hypothetical protein	NA	NA	NA	NA
WP_068759599.1\|2322624_2323467_+	trypsin-like peptidase domain-containing protein	A0A2H4JE36	uncultured_Caudovirales_phage	1.9e-42	36.7
WP_068759789.1\|2324821_2326027_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.4e-43	45.5
WP_068759600.1\|2326468_2327347_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_068759601.1\|2327500_2328274_+	23S ribosomal RNA methyltransferase Erm	E4ZFQ0	Streptococcus_phage	3.1e-39	39.3
WP_068759602.1\|2328442_2329693_+	GTPase HflX	NA	NA	NA	NA
WP_144436974.1\|2329828_2330026_-\|transposase	transposase	NA	NA	NA	NA
WP_144436975.1\|2330418_2331550_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.5e-95	61.2
WP_055245068.1\|2332946_2333924_+	hypothetical protein	NA	NA	NA	NA
WP_055277594.1\|2333926_2334415_+	hypothetical protein	NA	NA	NA	NA
WP_068759604.1\|2334577_2335309_+	hypothetical protein	NA	NA	NA	NA
WP_055276117.1\|2336063_2336270_+	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_055305080.1\|2336298_2336535_+	DUF2922 family protein	NA	NA	NA	NA
WP_068759605.1\|2336849_2337248_+	hypothetical protein	NA	NA	NA	NA
WP_068759606.1\|2337394_2337601_-	hypothetical protein	NA	NA	NA	NA
WP_082704906.1\|2337629_2339813_+	DUF3427 domain-containing protein	Q5YA94	Bacillus_phage	2.0e-27	31.0
WP_055242202.1\|2339856_2340246_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	G8DF69	Emiliania_huxleyi_virus	4.2e-05	29.5
WP_068759607.1\|2340451_2341981_+	hypothetical protein	NA	NA	NA	NA
WP_055275364.1\|2342150_2342411_-	hypothetical protein	Q9MBM9	Staphylococcus_prophage	2.5e-06	56.2
WP_068759608.1\|2342545_2344333_-	glycerophosphodiester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	1.6e-06	29.0
WP_055275368.1\|2344791_2345103_+	hypothetical protein	NA	NA	NA	NA
WP_055275370.1\|2345408_2345843_+	hypothetical protein	NA	NA	NA	NA
WP_055242216.1\|2346293_2346572_+	hypothetical protein	NA	NA	NA	NA
WP_068759609.1\|2349241_2350528_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_068759745.1\|2350542_2351748_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-43	45.5

DBSCAN-SWA_5

2380219 : 2385094

uncultured_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_055305798.1\|2380219_2381164_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.4e-78	49.0
WP_055244484.1\|2382225_2382657_+	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	9.7e-11	32.1
WP_068759622.1\|2382656_2383325_+	putative 7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	2.0e-42	45.2
WP_055275417.1\|2383326_2383923_+	GTP cyclohydrolase I	S4U0J3	uncultured_phage	1.3e-42	48.7
WP_055275419.1\|2383935_2384595_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	5.2e-64	55.3
WP_068759623.1\|2384596_2385094_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.4e-53	67.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013476

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection