CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP014254	Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_02, complete sequence	0 crisprs	csa3	1
NZ_CP014253	Listeria monocytogenes strain CFSAN023459 plasmid CFSAN023459_01, complete sequence	0 crisprs	NA	0
NZ_CP014252	Listeria monocytogenes strain CFSAN023459, complete genome	2 crisprs	DinG,cas3,WYL,casR,RT,DEDDh,csa3	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9626 : 16608

Streptococcus_phage(66.67%)

integrase,transposase

attL 1811:1829|attR 15856:15874

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1811:1829	attL	NA	NA	NA	NA
WP_011011045.1\|9626_10307_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.5e-93	69.5
WP_023558764.1\|10366_10870_+\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	6.6e-19	35.9
WP_003726381.1\|11514_13632_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	5.3e-235	62.6
WP_003726380.1\|13628_13988_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	5.4e-23	48.2
WP_003725299.1\|14261_14861_-	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	1.8e-15	31.8
WP_003759224.1\|15927_16608_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.5e-93	69.9
15856:15874	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP014252

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014252_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014252_1

511729-512313

Orphan

Consensus_repeat	Method
GATGTAAGTAATTTTGATACNAGTTCAGTAACTNATATG	CRT

7 spacers

The CRISPR arrays of NZ_CP014252_1

>merge|NZ_CP014252|1|511729-512313|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATGTGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTGGATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATGTCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTGGATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATGTATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTGGATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATGTATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTAGATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATGGTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTGGATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATGCGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTAGATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATGGCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTTGATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

>NZ_CP014252|1|1|511729-512313|CRT
GATTTGAGTGGTCTTGATACTAGTGCGGTAACTACTATG	TGGGATATGTTTAACAGCTGTAGGGCACTTGAGGAACTG
GATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATG	TCTTACATGTTTTATGATAATAGAAACCTTGAGGTGCTG
GATGTAAGCAACCTTGATACCGGTTCAGTAACTAATATG	TATGCCATGTTTGAAGATTGTACTAGTCTTGAAGAGCTG
GATGTAAGTAATTTTGATACGAGTTCAGTAACTGATATG	TATAGAGTGTTTAATGGCTGTGAAAAACTGAAGAAACTA
GATGTAAGTAATTTCGATACCAGTTCCGCTACTGCAATG	GTTCAAATGTTTAGAAATTGTAGCGCCCTTGAGAAGTTG
GATGTAAGTAATTTTAATACGAGCTTAGTAACTGATATG	CGTGCCATGTTTGCTGGTTGTACTAGTCTTGAAGCGTTA
GATGTAAGTAATTTTGATACGAGTTCAGTAACTAATATG	GCTGCCATGTTTTCTGATAATGAAAAACTGGAGAAGCTT
GATTTAAGTACCTTTGATACCAGTTCAGTGACTAACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014252.1\|WP_003725186.1\|496349_498509_-\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_CP014252.1\|WP_003725209.1\|521579_522059_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_CP014252.1\|WP_003721252.1\|515099_515573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_026747116.1\|513276_515034_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP014252.1\|WP_009929138.1\|498505_499654_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP014252.1\|WP_003740428.1\|500761_502357_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP014252.1\|WP_003725199.1\|516486_516753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_023550311.1\|507052_508591_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|368260
NZ_CP014252.1\|WP_003734632.1\|495477_496233_-\|DUF4866-domain-containing-protein	unknown	unknown	gnl\|CDD\|379782
NZ_CP014252.1\|WP_003728093.1\|503775_504876_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_CP014252.1\|WP_003728092.1\|504868_506419_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP014252.1\|WP_003725208.1\|520386_521490_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|237717
NZ_CP014252.1\|WP_003721253.1\|515592_516078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_003725189.1\|502491_503775_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP014252.1\|WP_003721271.1\|522216_522582_+\|heme-oxygenase-IsdG	unknown	unknown	gnl\|CDD\|183970
NZ_CP014252.1\|WP_003727318.1\|516105_516411_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP014252.1\|WP_003728986.1\|518535_520236_+\|oleate-hydratase	unknown	unknown	gnl\|CDD\|227060
NZ_CP014252.1\|WP_003733207.1\|517865_518426_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP014252.1\|WP_023550313.1\|508854_510936_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP014252.1\|WP_003721242.1\|499658_500606_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786

Protein	Function_ID	Function_description	E-value
NZ_CP014252.1\|WP_003725186.1\|496349_498509_-\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.40206e-28
NZ_CP014252.1\|WP_003725209.1\|521579_522059_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.03205e-42
NZ_CP014252.1\|WP_026747116.1\|513276_515034_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	5.49851e-29
NZ_CP014252.1\|WP_009929138.1\|498505_499654_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.37557e-52
NZ_CP014252.1\|WP_003740428.1\|500761_502357_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.42853e-59
NZ_CP014252.1\|WP_023550311.1\|507052_508591_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|368260	pfam05043, Mga, Mga helix-turn-helix domain. M regulator protein trans-acting positive regulator (Mga) is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This domain is found in the centre of the Mga proteins. This family also contains a number of bacterial RofA transcriptional regulators that seem to be largely restricted to streptococci. These proteins have been shown to regulate the expression of important bacterial adhesins. This is presumably a DNA-binding domain.	1.01429e-19
NZ_CP014252.1\|WP_003734632.1\|495477_496233_-\|DUF4866-domain-containing-protein	gnl\|CDD\|379782	pfam16160, DUF4866, Domain of unknown function (DUF4866). This family consists of uncharacterized proteins around 250 residues in length and is mainly found in various human gut Firmicute species and abundant in human gut metagenomic datasets. The function of this family is unknown.	2.71521e-121
NZ_CP014252.1\|WP_003728093.1\|503775_504876_+\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_CP014252.1\|WP_003728092.1\|504868_506419_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.15698e-106
NZ_CP014252.1\|WP_003725208.1\|520386_521490_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP014252.1\|WP_003725189.1\|502491_503775_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.40318e-96
NZ_CP014252.1\|WP_003721271.1\|522216_522582_+\|heme-oxygenase-IsdG	gnl\|CDD\|183970	PRK13316, PRK13316, heme oxygenase IsdG.	3.55164e-70
NZ_CP014252.1\|WP_003727318.1\|516105_516411_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	4.34504e-05
NZ_CP014252.1\|WP_003728986.1\|518535_520236_+\|oleate-hydratase	gnl\|CDD\|227060	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown].	0
NZ_CP014252.1\|WP_003733207.1\|517865_518426_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.23521e-25
NZ_CP014252.1\|WP_023550313.1\|508854_510936_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.76219e-29
NZ_CP014252.1\|WP_003721242.1\|499658_500606_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102

>NZ_CP014252.1|WP_023550313.1|508854_510936_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELGSLDTSNLIAEEVAQEKPAEVENLEEIPTTDELMQNPEVREQPVADSDDPDLTAVSSGDYWTIYYNSANDEYSLRMFGNVPSSKPSAWNSYLKYIKHIEIEEATLTGDFSSYFRSNVFTVLESVRIERSNLSGVTSFARAFEGDSESESPLEKVIIRDNYYQETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVTNMYGMFAYCYNLEELDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSINYE
>NZ_CP014252.1|WP_023550311.1|507052_508591_+|helix-turn-helix-domain-containing-protein
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLSISTGNQVEITGDEFSLRIFYAFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTNLDRNIRKIHKVNHLEPLISQLVNLKEMDPLKPFEERLASDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLESDYVKINDNLAKIARKKFIANKKN
>NZ_CP014252.1|WP_003728092.1|504868_506419_+|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_CP014252.1|WP_003728093.1|503775_504876_+|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_CP014252.1|WP_003725189.1|502491_503775_+|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_CP014252.1|WP_003740428.1|500761_502357_+|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_CP014252.1|WP_003721242.1|499658_500606_-|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_CP014252.1|WP_009929138.1|498505_499654_-|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_CP014252.1|WP_003725186.1|496349_498509_-|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_CP014252.1|WP_003734632.1|495477_496233_-|DUF4866-domain-containing-protein
MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIIHSYEPDFSISTKRINKKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK
>NZ_CP014252.1|WP_026747116.1|513276_515034_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGSANVSTAQERDTTNKLPEVELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDVLEQPVADSDDTDLTVVSSGDFWTIYRNTVNNEYSLCMFGNVPSSRPTAWNTYLNRIKHIEIEEATLTGSFASYFSGDYFTVLESVKIEQCNLSGVTSFEKAFYNSGIEKVIIRDNDYPTAPSLLTTQYMFQLCRKLSELDLSGLDTSAITNIYGMFQFCSGLEELDLSHFDTSSVTNMYSMFSGCGSLEILDVSNWDTSSVTNMNRMFQNCTSLEELDLSTFDTSSMTDMGMMFNGCTALKSLYLDNFTDAAIMTDMFTGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRNQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYGETTISENNKLTLSNTADATVQCLVPLSWDGSENNPENAILTLAPGSEITEGDAVMEIKSPENIQAGKYTGNVVFSIKYE
>NZ_CP014252.1|WP_003721252.1|515099_515573_+|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETKQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_CP014252.1|WP_003721253.1|515592_516078_+|hypothetical-protein
MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_CP014252.1|WP_003727318.1|516105_516411_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFFLSPDRVQASQTVVEVLISEDDLDVSEENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE
>NZ_CP014252.1|WP_003725199.1|516486_516753_+|hypothetical-protein
MARIEYGEEIQKSLLVLYSRGSTIDSICKEYGIPRYEFHKWMKLHDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_CP014252.1|WP_003733207.1|517865_518426_+|TetR-family-transcriptional-regulator
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
>NZ_CP014252.1|WP_003728986.1|518535_520236_+|oleate-hydratase
MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFVCRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNILDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWYMWQTTFAFQKWSSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTVEDIDFKDAPGITATALHLSDGSTIELGPDDDVIMTNACMTDSATLGDMNTPAPKPEEKPISGELWYKVAQKKPNLGNPEPFFGHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGSGALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEEILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAMISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
>NZ_CP014252.1|WP_003725208.1|520386_521490_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE
>NZ_CP014252.1|WP_003725209.1|521579_522059_+|AraC-family-transcriptional-regulator
MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDAERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSVGPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE
>NZ_CP014252.1|WP_003721271.1|522216_522582_+|heme-oxygenase-IsdG
MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK

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Crispr_ID: NZ_CP014252_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014252_2

513949-514206

Orphan

Consensus_repeat	Method
GATACCAGTTCCGTTACTAATATG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP014252_2

>merge|NZ_CP014252|2|513949-514206|CRISPRCasFinder
GATACGAGTGCTATAACTAATATATATGGCATGTTTCAATTTTGCTCTGGTCTTGAAGAGTTAGATTTAAGTCATTTTGATACCAGTTCCGTTACTAATATGTATTCCATGTTTTCGGGTTGTGGATCACTGGAGATTTTGGATGTAAGCAATTGGGATACGAGTTCCGTTACTAATATGAATAGAATGTTTCAAAATTGTACTAGTCTTGAAGAGCTAGATTTAAGTACCTTTGATACCAGTTCAATGACTGACATG

>NZ_CP014252|2|1|513949-514206|CRISPRCasFinder
GATACGAGTGCTATAACTAATATA	TATGGCATGTTTCAATTTTGCTCTGGTCTTGAAGAGTTAGATTTAAGTCATTTT
GATACCAGTTCCGTTACTAATATG	TATTCCATGTTTTCGGGTTGTGGATCACTGGAGATTTTGGATGTAAGCAATTGG
GATACGAGTTCCGTTACTAATATG	AATAGAATGTTTCAAAATTGTACTAGTCTTGAAGAGCTAGATTTAAGTACCTTT
GATACCAGTTCAATGACTGACATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014252.1\|WP_003725186.1\|496349_498509_-\|transglutaminase	unknown	unknown	gnl\|CDD\|376628
NZ_CP014252.1\|WP_003725209.1\|521579_522059_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_CP014252.1\|WP_003731249.1\|522855_524619_+\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238824
NZ_CP014252.1\|WP_003721252.1\|515099_515573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_009929138.1\|498505_499654_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP014252.1\|WP_003740428.1\|500761_502357_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP014252.1\|WP_003725199.1\|516486_516753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_023550311.1\|507052_508591_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|368260
NZ_CP014252.1\|WP_003728093.1\|503775_504876_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|226065
NZ_CP014252.1\|WP_003728092.1\|504868_506419_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP014252.1\|WP_003725208.1\|520386_521490_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|237717
NZ_CP014252.1\|WP_003721253.1\|515592_516078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014252.1\|WP_003725189.1\|502491_503775_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP014252.1\|WP_026747115.1\|511071_513141_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP014252.1\|WP_003721271.1\|522216_522582_+\|heme-oxygenase-IsdG	unknown	unknown	gnl\|CDD\|183970
NZ_CP014252.1\|WP_003727318.1\|516105_516411_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP014252.1\|WP_003728986.1\|518535_520236_+\|oleate-hydratase	unknown	unknown	gnl\|CDD\|227060
NZ_CP014252.1\|WP_003733207.1\|517865_518426_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP014252.1\|WP_023550313.1\|508854_510936_+\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP014252.1\|WP_003721242.1\|499658_500606_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786

Protein	Function_ID	Function_description	E-value
NZ_CP014252.1\|WP_003725186.1\|496349_498509_-\|transglutaminase	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.40206e-28
NZ_CP014252.1\|WP_003725209.1\|521579_522059_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.03205e-42
NZ_CP014252.1\|WP_003733207.1\|517865_518426_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.23521e-25
NZ_CP014252.1\|WP_009929138.1\|498505_499654_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.37557e-52
NZ_CP014252.1\|WP_003740428.1\|500761_502357_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.42853e-59
NZ_CP014252.1\|WP_023550311.1\|507052_508591_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|368260	pfam05043, Mga, Mga helix-turn-helix domain. M regulator protein trans-acting positive regulator (Mga) is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This domain is found in the centre of the Mga proteins. This family also contains a number of bacterial RofA transcriptional regulators that seem to be largely restricted to streptococci. These proteins have been shown to regulate the expression of important bacterial adhesins. This is presumably a DNA-binding domain.	1.01429e-19
NZ_CP014252.1\|WP_003728093.1\|503775_504876_+\|DUF917-domain-containing-protein	gnl\|CDD\|226065	COG3535, COG3535, Uncharacterized conserved protein [Function unknown].	0
NZ_CP014252.1\|WP_003728092.1\|504868_506419_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.15698e-106
NZ_CP014252.1\|WP_003731249.1\|522855_524619_+\|RNA-directed-DNA-polymerase	gnl\|CDD\|238824	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	1.43128e-28
NZ_CP014252.1\|WP_003725189.1\|502491_503775_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	2.40318e-96
NZ_CP014252.1\|WP_026747115.1\|511071_513141_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	8.72154e-31
NZ_CP014252.1\|WP_003721271.1\|522216_522582_+\|heme-oxygenase-IsdG	gnl\|CDD\|183970	PRK13316, PRK13316, heme oxygenase IsdG.	3.55164e-70
NZ_CP014252.1\|WP_003727318.1\|516105_516411_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	4.34504e-05
NZ_CP014252.1\|WP_003728986.1\|518535_520236_+\|oleate-hydratase	gnl\|CDD\|227060	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown].	0
NZ_CP014252.1\|WP_003725208.1\|520386_521490_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|237717	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_CP014252.1\|WP_023550313.1\|508854_510936_+\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	3.76219e-29
NZ_CP014252.1\|WP_003721242.1\|499658_500606_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.47241e-102

>NZ_CP014252.1|WP_026747115.1|511071_513141_+|BspA-family-leucine-rich-repeat-surface-protein
MKKLSIRVILIVTIIFIACGSANVSIAQERDIINKLPEVELGSLYTSNLITEEVAQDKPAEVENLEQAPTTDDLVQNPDVLEQPIADSDDSDLTVVNSGDFWTIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALAFYGSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLMEVDLSGLDTSAVTTMWDMFNSCRALEELDVSNFDTSSVTNMSYMFYDNRNLEVLDVSNLDTGSVTNMYAMFEDCTSLEELDVSNFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSATAMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMFSDNEKLEKLDLSTFDTSSVTNMGTMFKNCTALKSLFLDNFTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLENTNWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGEFLSLTMDAMGGQFEDAEEQKVQSKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPATVSATLYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVQCLAPLSWDGSETNPKNAILTLAPGSEITEGDAVMEIESPENIQAGTYTGNLVFSINYE
>NZ_CP014252.1|WP_023550313.1|508854_510936_+|BspA-family-leucine-rich-repeat-surface-protein
MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELGSLDTSNLIAEEVAQEKPAEVENLEEIPTTDELMQNPEVREQPVADSDDPDLTAVSSGDYWTIYYNSANDEYSLRMFGNVPSSKPSAWNSYLKYIKHIEIEEATLTGDFSSYFRSNVFTVLESVRIERSNLSGVTSFARAFEGDSESESPLEKVIIRDNYYQETPSLTNISRMFTLCRKLSELDVSGLNTSSVTKMDTIFSNANSLKELDVSHFDTSSVTDMSSMFAACNSLEELDVSNFDTSSVTNMKYMLSGLHLKKLDVSNFDTSSVTNMYGMFAYCYNLEELDVSNFDTSSVNNMLHMFYVCNNLEELDLSNFDTSSVTNMFAMFAYCTSLKEIDVSNFDTSSVTTMSAMFFECSSLEALDLSNFDTSSVTTMASMFENSTALKSLYLDNFTDAASMTDMFKGTTSLTYLFVSHNLSTFNRLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKVSGEYWEEIVPVKEDYYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASISLNEATELKVEGINRGSKALSVGLNRLATSVSESNELTLANTADTTVQCSAPLSWDGSENNPEKAILTLAPGSEITEGDAVMAIEAPENIQAGKYTGNLVFSINYE
>NZ_CP014252.1|WP_023550311.1|507052_508591_+|helix-turn-helix-domain-containing-protein
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLSISTGNQVEITGDEFSLRIFYAFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTNLDRNIRKIHKVNHLEPLISQLVNLKEMDPLKPFEERLASDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLESDYVKINDNLAKIARKKFIANKKN
>NZ_CP014252.1|WP_003728092.1|504868_506419_+|hydantoinase/oxoprolinase-family-protein
MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESLHRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPEDMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKNDQELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKALEQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDVGGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGPDSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMTEDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQYEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLRVKVVGNLV
>NZ_CP014252.1|WP_003728093.1|503775_504876_+|DUF917-domain-containing-protein
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
>NZ_CP014252.1|WP_003725189.1|502491_503775_+|cytosine-permease
MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWEAILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGWFGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVLLFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKSRKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWTTNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMVPPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQLPNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK
>NZ_CP014252.1|WP_003740428.1|500761_502357_+|PucR-family-transcriptional-regulator
MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALLEDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMDQKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSVRPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEHELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWGRNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAELKSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQGMEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMRPLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKIPESYNLYLAVAIRRILGGNNNNK
>NZ_CP014252.1|WP_003721242.1|499658_500606_-|MoxR-family-ATPase
MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLEDVPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGNIVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALPEAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFIDDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLAPYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR
>NZ_CP014252.1|WP_009929138.1|498505_499654_-|DUF58-domain-containing-protein
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>NZ_CP014252.1|WP_003725186.1|496349_498509_-|transglutaminase
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>NZ_CP014252.1|WP_003721252.1|515099_515573_+|hypothetical-protein
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETKQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>NZ_CP014252.1|WP_003721253.1|515592_516078_+|hypothetical-protein
MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK
>NZ_CP014252.1|WP_003727318.1|516105_516411_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKRKLVLAMVLISFCGMFFLSPDRVQASQTVVEVLISEDDLDVSEENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE
>NZ_CP014252.1|WP_003725199.1|516486_516753_+|hypothetical-protein
MARIEYGEEIQKSLLVLYSRGSTIDSICKEYGIPRYEFHKWMKLHDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP
>NZ_CP014252.1|WP_003733207.1|517865_518426_+|TetR-family-transcriptional-regulator
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
>NZ_CP014252.1|WP_003728986.1|518535_520236_+|oleate-hydratase
MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKARYYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFVCRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNILDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWYMWQTTFAFQKWSSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTVEDIDFKDAPGITATALHLSDGSTIELGPDDDVIMTNACMTDSATLGDMNTPAPKPEEKPISGELWYKVAQKKPNLGNPEPFFGHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGSGALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEEILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAMISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
>NZ_CP014252.1|WP_003725208.1|520386_521490_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE
>NZ_CP014252.1|WP_003725209.1|521579_522059_+|AraC-family-transcriptional-regulator
MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDAERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSVGPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE
>NZ_CP014252.1|WP_003721271.1|522216_522582_+|heme-oxygenase-IsdG
MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGFELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVGNAIARFEVVHVQNPVIVEK
>NZ_CP014252.1|WP_003731249.1|522855_524619_+|RNA-directed-DNA-polymerase
MRKKVDVLSMDNEKAREFFMKPSSYFSQNLPKYFNLGYLLESAESKLGKKQLKKEMYFENKVYSNFPNVNFLIQTNKTISTYRPITLLHPYIYVDYVNFLTEIKIWEELKERFQNLQEEVKEKIICSSLPFDIETSKEDDSKKEMALNFWKSIEQETIKYSLGYNYLLKLDISNFYGSIYTHTLCWAFHGENYSKEAKNSKNLQNLTGDKCDRKFQWMNYGETVGIPQGNVISDLMSELLLAYIDSELVKKIDDEIDYKIIRYRDDYRIFTKRLEDSTLVKRELVVLLQRFKLNLGESKTSQTTDIISGSLKEDKMYWIEHDPVTKLTSDKFYRSPKILMKKSLEEHKNKKYKTRVFNEFFKKHFHNRTYQATLQKHLLIIKVFSDLYPNSGQLIAALHEFEGRLLDLNYKDFRNIGTEVEVLIAILVDIIKKNPKITEIGVKLLSTLLKKINFEEFEMKYLESNNSNEVQSDFEVKLAYINSVNHKLSNSNYNDYLEIWMQRLVVKNLKESTTLSDLYIEQSKNELVKFCNSIIRGKEMIQIFNEDWLKDEHKIELSKFINLNEIDKLTDIISDDEIYLAEYNQMT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

125863 : 132390

Listeria_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728215.1\|125863_126316_-	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9
WP_003721740.1\|126321_126657_-	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_009927883.1\|126873_127302_+	hypothetical protein	NA	NA	NA	NA
WP_003731177.1\|127313_127730_+	hypothetical protein	A8ASQ1	Listeria_phage	6.5e-20	37.9
WP_003728212.1\|128009_128399_+	DUF5072 domain-containing protein	NA	NA	NA	NA
WP_003721744.1\|128411_128924_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_003721745.1\|128971_129274_+	hypothetical protein	NA	NA	NA	NA
WP_003740367.1\|129315_129720_+	hypothetical protein	NA	NA	NA	NA
WP_009928420.1\|129706_131575_+	membrane protein	A0A097PAU2	Streptococcus_pyogenes_phage	4.5e-20	45.8
WP_003734720.1\|131571_132390_+\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	7.2e-39	35.0

DBSCAN-SWA_2

689742 : 745229

Listeria_phage(48.39%)

holin,integrase,portal,head,capsid,transposase,terminase,tail,protease

attL 682448:682465|attR 742977:742994

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
682448:682465	attL	NA	NA	NA	NA
WP_012951296.1\|689742_690894_-\|integrase	site-specific integrase	A8ATX2	Listeria_phage	3.4e-87	46.3
WP_031641924.1\|690915_691629_-	lipoprotein	NA	NA	NA	NA
WP_031641923.1\|691683_692184_-	hypothetical protein	A0A1S7FYX8	Listeria_phage	7.1e-13	31.1
WP_031641922.1\|692184_692535_-	helix-turn-helix domain-containing protein	A0A059T669	Listeria_phage	2.3e-18	49.0
WP_031641921.1\|692688_692886_+	helix-turn-helix transcriptional regulator	A0A059T7X5	Listeria_phage	7.5e-11	52.3
WP_031641920.1\|692908_693235_+	DUF771 domain-containing protein	A0A2H4J474	uncultured_Caudovirales_phage	4.9e-15	41.5
WP_031641918.1\|694447_694804_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_060868931.1\|695404_695929_+	hypothetical protein	A0A059T5F9	Listeria_phage	2.3e-94	94.8
WP_003731843.1\|696120_696336_+	hypothetical protein	NA	NA	NA	NA
WP_060868932.1\|696414_697008_+	pentapeptide repeat-containing protein	A8ATE4	Listeria_phage	1.9e-41	88.1
WP_009932913.1\|697050_697152_+	hypothetical protein	NA	NA	NA	NA
WP_003731837.1\|697135_697744_+	hypothetical protein	A8ATU1	Listeria_phage	1.4e-55	49.5
WP_014601398.1\|698318_698780_+	hypothetical protein	D9J0I6	Brochothrix_phage	5.5e-12	29.9
WP_149806097.1\|698937_699237_+	hypothetical protein	R4IBL7	Listeria_phage	3.6e-20	91.1
WP_012951314.1\|699237_699717_+	single-stranded DNA-binding protein	A8ASP5	Listeria_phage	2.9e-64	77.5
WP_012951315.1\|699770_699962_+	hypothetical protein	NA	NA	NA	NA
WP_012951316.1\|700021_700540_+	hypothetical protein	NA	NA	NA	NA
WP_012951317.1\|700536_701079_+\|integrase	tyrosine-type recombinase/integrase	H0USV4	Bacillus_phage	4.3e-48	53.3
WP_012951318.1\|701360_701588_+	hypothetical protein	NA	NA	NA	NA
WP_102578311.1\|701613_701889_+	hypothetical protein	NA	NA	NA	NA
WP_049961585.1\|701885_702248_+	HNH endonuclease	A0A075M5R4	Enterococcus_phage	3.5e-14	44.1
WP_012951321.1\|702342_702870_+\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	6.1e-31	46.7
WP_012951322.1\|702838_704590_+\|terminase	terminase large subunit	A0A2H4JCI4	uncultured_Caudovirales_phage	4.1e-156	50.7
WP_023552290.1\|704596_704797_+	DUF1056 family protein	NA	NA	NA	NA
WP_012951323.1\|704799_706035_+\|portal	phage portal protein	A0A2H4JAR2	uncultured_Caudovirales_phage	3.6e-82	42.1
WP_012951324.1\|706031_706598_+\|head,protease	HK97 family phage prohead protease	A0A1D6Z2A7	Staphylococcus_phage	1.0e-44	52.2
WP_102135612.1\|706655_707831_+\|capsid	phage major capsid protein	A0A060AI54	Enterococcus_phage	2.2e-44	38.1
WP_012951326.1\|707879_708218_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JB77	uncultured_Caudovirales_phage	8.1e-13	37.8
WP_012951327.1\|708187_708508_+\|head	phage head closure protein	NA	NA	NA	NA
WP_012951328.1\|708501_708867_+	hypothetical protein	NA	NA	NA	NA
WP_012951329.1\|708869_709268_+	hypothetical protein	NA	NA	NA	NA
WP_031641752.1\|709288_709864_+\|tail	phage major tail protein	M1PRQ7	Streptococcus_phage	9.2e-33	42.9
WP_012951331.1\|709953_710301_+	hypothetical protein	NA	NA	NA	NA
WP_012951333.1\|710497_714697_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.2e-12	33.0
WP_012951334.1\|714689_716933_+	minor structural protein GP75	A0A059T682	Listeria_phage	1.6e-56	29.4
WP_031641434.1\|716938_719230_+	phage minor structural protein	A0A059T7Y6	Listeria_phage	3.4e-134	38.1
WP_031641433.1\|719222_720284_+	hypothetical protein	A8ATW1	Listeria_phage	1.6e-94	68.6
WP_003722523.1\|720322_720688_+	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722522.1\|720700_720982_+\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_012951337.1\|720981_721827_+	peptidase M15	A0A059T7Y8	Listeria_phage	4.8e-139	93.3
WP_003724378.1\|722679_723351_+	hypothetical protein	NA	NA	NA	NA
WP_003724379.1\|723380_723566_+	hypothetical protein	NA	NA	NA	NA
WP_003724380.1\|724106_724640_+	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_014929420.1\|724703_725621_+	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA
WP_021496183.1\|725886_727767_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	8.3e-107	38.1
WP_003724383.1\|727861_728590_+	hypothetical protein	NA	NA	NA	NA
WP_003724384.1\|728729_729380_+	TalA family protein	M4SLG0	Cyanophage	1.7e-14	29.3
WP_003740476.1\|729422_731243_-	LTA synthase family protein	W6LM83	Streptococcus_phage	7.7e-49	28.7
WP_060868934.1\|731477_732869_+	amino acid permease	NA	NA	NA	NA
WP_009928457.1\|732958_733798_+	VOC family protein	NA	NA	NA	NA
WP_003721764.1\|733880_734165_-	hypothetical protein	NA	NA	NA	NA
WP_003724388.1\|734262_735213_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003724389.1\|735236_735878_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003727229.1\|735920_738611_+	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_003731019.1\|738656_739304_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003731020.1\|739313_739850_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003740477.1\|739836_740829_-	DUF975 family protein	NA	NA	NA	NA
WP_003721771.1\|741019_741229_+	hypothetical protein	NA	NA	NA	NA
WP_003727224.1\|741296_742004_+	serine/threonine protein phosphatase	A0A249Y183	Enterococcus_phage	1.3e-20	28.2
WP_060868935.1\|742049_742613_-	DUF420 domain-containing protein	NA	NA	NA	NA
WP_003724397.1\|742732_743149_+	hypothetical protein	NA	NA	NA	NA
742977:742994	attR	NA	NA	NA	NA
WP_009928463.1\|743191_743821_+	endonuclease III domain-containing protein	NA	NA	NA	NA
WP_023550362.1\|743817_744714_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_003724400.1\|744947_745229_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1161132 : 1168555

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003730941.1\|1161132_1161516_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7
WP_003727002.1\|1161537_1162521_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.0e-11	33.8
WP_026747136.1\|1162535_1163549_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.8e-10	31.2
WP_003721509.1\|1163757_1165248_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_023550416.1\|1165259_1166084_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.3e-67	52.2
WP_009929872.1\|1166096_1166405_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_009929871.1\|1166465_1166870_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA
WP_023550418.1\|1166998_1168555_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	6.0e-18	29.2

DBSCAN-SWA_4

1290165 : 1334286

Streptococcus_phage(18.18%)

tRNA,protease,integrase

attL 1290128:1290148|attR 1291788:1291808

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1290128:1290148	attL	NA	NA	NA	NA
WP_075356968.1\|1290165_1290267_-\|integrase	integrase	A0A059T688	Listeria_phage	7.0e-05	63.6
WP_003726037.1\|1290663_1291137_+	hypothetical protein	NA	NA	NA	NA
WP_009928186.1\|1291242_1291605_+	hypothetical protein	NA	NA	NA	NA
WP_031645846.1\|1294781_1296845_+	LapB repeat-containing protein	NA	NA	NA	NA
1291788:1291808	attR	NA	NA	NA	NA
WP_003726042.1\|1296967_1298326_+	DUF1254 domain-containing protein	NA	NA	NA	NA
WP_003726043.1\|1298368_1298962_-	hypothetical protein	NA	NA	NA	NA
WP_003726044.1\|1299098_1299506_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003726045.1\|1299670_1300270_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	1.3e-29	41.0
WP_009928848.1\|1300301_1300562_-	hypothetical protein	NA	NA	NA	NA
WP_023550481.1\|1300685_1302098_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.9e-51	32.0
WP_003726048.1\|1302122_1302386_+	DUF3116 domain-containing protein	NA	NA	NA	NA
WP_003727535.1\|1302553_1303030_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_003726050.1\|1303067_1303313_-	hypothetical protein	NA	NA	NA	NA
WP_003726051.1\|1303309_1304515_-	MFS transporter	NA	NA	NA	NA
WP_003726058.1\|1304535_1304721_-	hypothetical protein	NA	NA	NA	NA
WP_003726052.1\|1304719_1305379_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003726053.1\|1305418_1305613_-	hypothetical protein	NA	NA	NA	NA
WP_003726054.1\|1305679_1306528_-	YitT family protein	NA	NA	NA	NA
WP_003726055.1\|1307145_1307859_+	trehalose operon repressor	NA	NA	NA	NA
WP_014929571.1\|1307889_1309536_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003727531.1\|1309554_1311039_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_003726723.1\|1311156_1311618_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003726717.1\|1311656_1312121_-	hypothetical protein	NA	NA	NA	NA
WP_003726718.1\|1312309_1313224_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_023550483.1\|1313249_1314497_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	7.2e-107	51.8
WP_003726720.1\|1314480_1315311_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	3.6e-46	42.4
WP_003734523.1\|1315457_1316597_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003723563.1\|1316676_1317072_-	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003727524.1\|1317222_1317438_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003727523.1\|1317561_1318095_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003731300.1\|1318110_1318776_+	hypothetical protein	NA	NA	NA	NA
WP_003727521.1\|1319037_1319976_+	hypothetical protein	NA	NA	NA	NA
WP_003723884.1\|1320090_1321374_+	trigger factor	NA	NA	NA	NA
WP_003723886.1\|1321558_1322818_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003726393.1\|1322936_1323503_+	type I signal peptidase SipX	NA	NA	NA	NA
WP_003726394.1\|1323537_1324107_+	type I signal peptidase SipY	NA	NA	NA	NA
WP_003727520.1\|1324208_1324751_+	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003726396.1\|1324760_1325624_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003727519.1\|1325620_1326406_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	6.7e-26	37.6
WP_003727518.1\|1326539_1327400_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003727517.1\|1327672_1329751_+	type I DNA topoisomerase	A0A1V0SB35	Catovirus	5.4e-107	37.5
WP_003726401.1\|1329813_1331118_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_023550485.1\|1331400_1332303_+	tyrosine recombinase XerC	A0A142K7N4	Mycobacterium_phage	1.8e-14	29.5
WP_031641425.1\|1332323_1332863_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_003727514.1\|1332876_1334286_+\|protease	ATP-dependent protease ATPase subunit HslU	W6AS21	Erwinia_phage	7.5e-44	27.8

DBSCAN-SWA_5

1804341 : 1837207

Erysipelothrix_phage(67.74%)

holin,portal,head,capsid,terminase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014929970.1\|1804341_1805256_-	N-acetylmuramoyl-L-alanine amidase	A0A1D8ETE4	Propionibacterium_phage	3.9e-33	44.0
WP_025186379.1\|1805245_1805659_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	1.5e-37	57.0
WP_003731143.1\|1805707_1806127_-	DUF1617 family protein	A0A1S5RCP5	Lactobacillus_phage	2.4e-06	26.5
WP_003731141.1\|1806287_1810352_-	hypothetical protein	A0A1B1P770	Bacillus_phage	8.7e-85	41.8
WP_003731140.1\|1810336_1811029_-	hypothetical protein	A0A1L2BYA2	Clostridium_phage	1.7e-20	29.0
WP_003731139.1\|1811044_1813606_-	hypothetical protein	A0A2K5B297	Erysipelothrix_phage	3.9e-83	74.1
WP_003731138.1\|1813673_1814318_-	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_003731137.1\|1814569_1814953_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	5.4e-37	64.2
WP_003731136.1\|1814962_1815553_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	4.1e-76	72.2
WP_029645088.1\|1815554_1815863_-	hypothetical protein	NA	NA	NA	NA
WP_003731135.1\|1815889_1816321_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	7.6e-40	59.4
WP_003731134.1\|1816313_1816652_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	1.7e-23	54.7
WP_003731133.1\|1816648_1816960_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	2.2e-36	74.0
WP_003731132.1\|1816970_1818188_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.1e-102	48.0
WP_095591263.1\|1818191_1818944_-\|protease	Clp protease ClpP	M1PLE5	Streptococcus_phage	1.9e-62	55.7
WP_014929974.1\|1818840_1820202_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	2.7e-179	74.0
WP_100066221.1\|1820269_1820530_-	hypothetical protein	NA	NA	NA	NA
WP_088518322.1\|1820661_1822254_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	7.2e-269	84.8
WP_003731127.1\|1822314_1822539_-	hypothetical protein	A0A2K5B284	Erysipelothrix_phage	2.0e-15	48.6
WP_003731126.1\|1822528_1822726_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_003731125.1\|1822700_1822895_-	hypothetical protein	NA	NA	NA	NA
WP_003731124.1\|1822897_1823287_-	DUF4314 domain-containing protein	E4ZFL7	Streptococcus_phage	3.1e-16	71.0
WP_003731123.1\|1823375_1824626_-	site-specific DNA-methyltransferase	A0A2I4R670	Erysipelothrix_phage	7.4e-144	62.0
WP_014929976.1\|1824615_1825233_-	HNH endonuclease	A0A0B5HE03	Vibrio_phage	1.1e-12	37.6
WP_014929977.1\|1825217_1826000_-	S-adenosylmethionine synthetase	NA	NA	NA	NA
WP_031641527.1\|1826004_1826583_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	1.2e-53	52.8
WP_031641526.1\|1826715_1827081_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	1.4e-31	56.9
WP_003731117.1\|1827248_1827677_-	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	1.5e-27	45.8
WP_014929979.1\|1827673_1829026_-	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	6.8e-159	69.0
WP_003731115.1\|1829025_1829310_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	3.5e-25	60.2
WP_003731114.1\|1829306_1829516_-	hypothetical protein	NA	NA	NA	NA
WP_003731113.1\|1829653_1831897_-	hypothetical protein	A0A1B0RXC5	Streptococcus_phage	4.8e-210	49.7
WP_014929980.1\|1831889_1832234_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	4.1e-28	51.4
WP_014929981.1\|1832226_1832997_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	2.7e-64	50.8
WP_003731110.1\|1833207_1835145_-	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	7.7e-265	68.6
WP_003731109.1\|1835205_1835748_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	8.9e-78	77.2
WP_003731108.1\|1835749_1836892_-	DUF2800 domain-containing protein	M1Q218	Streptococcus_phage	1.5e-122	57.8
WP_010821424.1\|1836892_1837207_-	hypothetical protein	A0A2K5B2A7	Erysipelothrix_phage	6.6e-09	41.5

DBSCAN-SWA_6

1918284 : 1926570

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003726209.1\|1918284_1918851_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.3e-26	36.4
WP_003726210.1\|1918847_1919897_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.2e-63	44.4
WP_003722245.1\|1919915_1921343_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_009918191.1\|1921327_1923547_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.5e-159	40.8
WP_003726212.1\|1923539_1924223_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003722248.1\|1924226_1924472_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003726214.1\|1924483_1925197_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	2.0e-40	38.3
WP_003729814.1\|1925277_1926570_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0

DBSCAN-SWA_7

2453580 : 2496851

Listeria_phage(95.16%)

holin,integrase,portal,capsid,terminase,tail,plate

attL 2450871:2450886|attR 2489746:2489761

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2450871:2450886	attL	NA	NA	NA	NA
WP_031641268.1\|2453580_2453778_-	hypothetical protein	A8ATC6	Listeria_phage	1.3e-15	66.7
WP_012951563.1\|2453774_2454008_-	hypothetical protein	A8ATC5	Listeria_phage	1.6e-36	98.7
WP_012951561.1\|2454448_2454631_+	hypothetical protein	A0A059T7Z0	Listeria_phage	2.3e-22	96.6
WP_003722520.1\|2454904_2455678_+	DUF3825 domain-containing protein	A8ATW5	Listeria_phage	9.5e-150	100.0
WP_060868954.1\|2455718_2456570_-	peptidase M15	A0A059T7Y8	Listeria_phage	1.5e-140	90.8
WP_031643043.1\|2456569_2456851_-\|holin	holin	R4IDW2	Listeria_phage	5.3e-42	95.7
WP_003722523.1\|2456863_2457229_-	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722524.1\|2457256_2457415_-	hypothetical protein	Q9T1A1	Listeria_phage	6.0e-19	100.0
WP_003722525.1\|2457419_2457737_-	hypothetical protein	Q9T1A2	Listeria_phage	6.2e-55	100.0
WP_003722526.1\|2457748_2458822_-\|plate	phage baseplate upper protein	Q9T1A3	Listeria_phage	4.5e-198	100.0
WP_014931687.1\|2458821_2459850_-	hypothetical protein	Q9T1A4	Listeria_phage	2.1e-189	98.8
WP_031645706.1\|2459850_2460876_-	phage minor structural protein	Q9T1A5	Listeria_phage	3.9e-191	93.3
WP_031645707.1\|2460884_2461703_-\|tail	phage tail family protein	Q9T1A6	Listeria_phage	3.8e-149	93.4
WP_060868955.1\|2461704_2467068_-	tape measure protein	Q9T1A7	Listeria_phage	0.0e+00	90.7
WP_031644596.1\|2467083_2467683_-	hypothetical protein	A0A0B5CTW0	Listeria_phage	8.1e-72	68.0
WP_031644594.1\|2467688_2468111_-	hypothetical protein	Q9T1A9	Listeria_phage	2.0e-69	99.3
WP_031645709.1\|2468162_2468495_-	Ig domain-containing protein	Q9T1B0	Listeria_phage	1.3e-39	84.5
WP_010990223.1\|2468424_2468862_-	hypothetical protein	A8ASK2	Listeria_phage	2.5e-78	99.3
WP_031645710.1\|2468864_2469272_-	hypothetical protein	A0A0B5CU21	Listeria_phage	1.5e-66	98.5
WP_031645711.1\|2469271_2469610_-	hypothetical protein	A0A059T7W4	Listeria_phage	7.0e-57	97.3
WP_031645712.1\|2469609_2469972_-	hypothetical protein	A0A0B5D151	Listeria_phage	1.8e-58	91.7
WP_031645713.1\|2469971_2470367_-	hypothetical protein	A8ASJ8	Listeria_phage	5.9e-55	84.0
WP_077918248.1\|2470368_2470527_-	hypothetical protein	Q9T1B6	Listeria_phage	2.5e-17	92.3
WP_031645714.1\|2470526_2471426_-\|capsid	phage major capsid protein	Q9T1B7	Listeria_phage	1.0e-166	99.7
WP_031645715.1\|2471449_2472019_-	scaffolding protein	Q9T1B8	Listeria_phage	2.8e-90	96.8
WP_031645716.1\|2472097_2473237_-	hypothetical protein	A8ASJ4	Listeria_phage	8.7e-200	96.0
WP_031645717.1\|2473242_2474733_-\|portal	phage portal protein	A0A0B5D0F2	Listeria_phage	1.2e-278	98.0
WP_060868956.1\|2474745_2476077_-\|terminase	PBSX family phage terminase large subunit	A8ASJ2	Listeria_phage	6.0e-261	98.6
WP_060868957.1\|2476045_2476588_-\|terminase	terminase small subunit	A8ASJ1	Listeria_phage	3.5e-90	97.8
WP_010990212.1\|2476645_2476909_-	hypothetical protein	A0A0S2MYE7	Enterococcus_phage	1.7e-34	78.2
WP_009911405.1\|2476935_2477235_-	phage protein	A0A2H4JBC0	uncultured_Caudovirales_phage	3.8e-14	40.7
WP_010990210.1\|2477629_2478064_-	hypothetical protein	A8AU03	Listeria_phage	2.6e-72	94.4
WP_023548496.1\|2478204_2478588_-	DUF2481 domain-containing protein	A8ASP8	Listeria_phage	4.4e-63	96.1
WP_042227941.1\|2478591_2478996_-	DUF1064 domain-containing protein	A8ASP7	Listeria_phage	1.4e-64	94.8
WP_003734994.1\|2478940_2479132_-	hypothetical protein	A8ASP6	Listeria_phage	8.0e-26	100.0
WP_060868958.1\|2479150_2479633_-	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	3.7e-67	83.1
WP_031645862.1\|2479629_2480214_-	DUF3310 domain-containing protein	A0A059T5J6	Listeria_phage	1.2e-75	75.3
WP_023548489.1\|2480229_2480577_-	hypothetical protein	A0A059T8V4	Listeria_phage	2.1e-56	87.8
WP_023548487.1\|2480590_2480818_-	DUF3850 domain-containing protein	A0A059T7N3	Listeria_phage	8.6e-35	97.3
WP_060868959.1\|2481021_2481732_-	pentapeptide repeat-containing protein	A0A060AFJ6	Listeria_phage	3.0e-33	94.6
WP_060868960.1\|2481902_2482424_-	hypothetical protein	A0A059T7V5	Listeria_phage	1.1e-32	48.3
WP_031645727.1\|2482420_2482975_-	DUF1642 domain-containing protein	A8ATY9	Listeria_phage	7.2e-83	79.0
WP_031645728.1\|2482971_2483652_-	hypothetical protein	A8ATD7	Listeria_phage	6.9e-120	96.0
WP_023548469.1\|2483664_2484609_-\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.7e-177	98.4
WP_031645729.1\|2484619_2485333_-	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	2.1e-127	96.2
WP_031645730.1\|2485329_2486241_-	DnaD domain-containing protein	A0A0B5D175	Listeria_phage	5.2e-139	92.1
WP_012582380.1\|2486261_2487077_-	recombinase RecT	A0A0B5CTU3	Listeria_phage	5.9e-150	99.3
WP_060868961.1\|2487076_2488036_-	YqaJ viral recombinase family protein	A8ATY5	Listeria_phage	4.8e-175	97.5
WP_010989962.1\|2488267_2488456_-	hypothetical protein	Q9T175	Listeria_phage	2.0e-21	79.0
WP_010991175.1\|2488563_2488779_-	hypothetical protein	Q9T176	Listeria_phage	2.2e-27	91.5
WP_031641947.1\|2488775_2489309_-	hypothetical protein	A0A0B5D173	Listeria_phage	1.1e-77	86.7
WP_031644189.1\|2489430_2490210_-	antirepressor	A0A059T6E7	Listeria_phage	7.6e-139	96.5
2489746:2489761	attR	NA	NA	NA	NA
WP_025370647.1\|2490273_2490516_+	hypothetical protein	A0A059T7Q3	Listeria_phage	1.5e-37	98.8
WP_003769995.1\|2490701_2490983_-	hypothetical protein	Q9T180	Listeria_phage	1.4e-39	96.8
WP_003733634.1\|2490979_2491216_-	hypothetical protein	A0A059T5E9	Listeria_phage	3.3e-37	100.0
WP_003769996.1\|2491255_2491540_-	hypothetical protein	A0A0B5D168	Listeria_phage	1.6e-46	98.9
WP_003735007.1\|2491551_2491746_-	hypothetical protein	A0A059T6E5	Listeria_phage	1.3e-26	100.0
WP_014930212.1\|2491766_2492000_-	helix-turn-helix transcriptional regulator	A8ASM3	Listeria_phage	5.4e-32	97.3
WP_060868962.1\|2492162_2492639_+	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	4.9e-56	78.9
WP_012582373.1\|2492795_2492963_+	hypothetical protein	NA	NA	NA	NA
WP_003770015.1\|2493684_2494560_+	hypothetical protein	A0A0B5D0D1	Listeria_phage	2.2e-150	94.5
WP_060868963.1\|2494623_2495982_+	recombinase family protein	Q9T193	Listeria_phage	9.5e-254	97.6
WP_003733645.1\|2495972_2496449_+	competence protein ComK	NA	NA	NA	NA
WP_003739618.1\|2496503_2496851_-	helix-turn-helix transcriptional regulator	A0A0A7RTK4	Clostridium_phage	9.9e-06	40.7

DBSCAN-SWA_8

2641174 : 2649016

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725407.1\|2641174_2642146_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4
WP_003731212.1\|2642153_2643122_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.8e-68	43.6
WP_003722606.1\|2643123_2643999_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003725409.1\|2644106_2645837_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	9.5e-174	53.1
WP_077915067.1\|2645878_2646940_-	galactose mutarotase	NA	NA	NA	NA
WP_009918601.1\|2646956_2647940_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.1e-52	38.7
WP_003722610.1\|2648056_2649016_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014254

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP014252

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection