CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014232	Actinomyces oris strain T14V chromosome, complete genome	8 crisprs	DEDDh,csa3,cas6,RT,csm3gr7,cas10,WYL,cas3,csb2gr5,cas4	0	10	0	0

1. NZ_CP014232

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014232_1

• CRISPR_ID: NZ_CP014232_1
• CRISPR_location: 625014-625415
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 5 spacers
• Cas_protein_info: cas6,RT,csm3gr7,cas10

Consensus repeat of NZ_CP014232_1

Consensus_repeat	Method
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CRT

spacers of NZ_CP014232_1

>1.1|625051|36|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT
GTGAACGGAGCCATGACAAACTCACCAGAGTCGTAG
>1.2|625124|38|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT
GTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCA
>1.3|625199|36|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT
AGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTC
>1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT
CGGATTTTAAGTCCGCTACGTCTGCCATTCCGC
>1.5|625342|36|NZ_CP014232|CRISPRCasFinder,CRT
GTCCAGGGGTCCATCCTCACCGGTCATCCCCGACAG

CRISPR arrays and Neighbor proteins around NZ_CP014232_1

CRISPR arrays

The CRISPR arrays of NZ_CP014232_1

>merge|NZ_CP014232|1|625014-625415|PILER-CR,CRISPRCasFinder,CRT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACGTGAACGGAGCCATGACAAACTCACCAGAGTCGTAGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACGTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCAGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACAGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTCGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACCGGATTTTAAGTCCGCTACGTCTGCCATTCCGCATCAGAAAGCACTCAGCACCAGAAGGTGCATTAAGACGTCCAGGGGTCCATCCTCACCGGTCATCCCCGACAGGTCAGAAATCACCCAGCACCAGAAGGCCTATTGACGGA

>NZ_CP014232|1|1|625014-625341|PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTGAACGGAGCCATGACAAACTCACCAGAGTCGTAG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	AGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTC
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	CGGATTTTAAGTCCGCTACGTCTGCCATTCCGC
ATCAGAAAGCACTCAGCACCAGAAGGTGCATTAAGAC

>NZ_CP014232|1|1|625014-625415|CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTGAACGGAGCCATGACAAACTCACCAGAGTCGTAG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	AGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTC
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	CGGATTTTAAGTCCGCTACGTCTGCCATTCCGC
ATCAGAAAGCACTCAGCACCAGAAGGTGCATTAAGAC	GTCCAGGGGTCCATCCTCACCGGTCATCCCCGACAG
GTCAGAAATCACCCAGCACCAGAAGGCCTATTGACGGA

>NZ_CP014232|1|1|625014-625414|CRT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTGAACGGAGCCATGACAAACTCACCAGAGTCGTAG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GTTCCTGAGCATCGCTTCTACGTAGATGTCCTTTACCA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	AGGTCAGCGAGCCACTCCGGCGGCTCGACATAGCTC
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	CGGATTTTAAGTCCGCTACGTCTGCCATTCCGC
ATCAGAAAGCACTCAGCACCAGAAGGTGCATTAAGAC	GTCCAGGGGTCCATCCTCACCGGTCATCCCCGACAG
GTCAGAAATCACCCAGCACCAGAAGGCCTATTGACGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187857
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter	unknown	unknown	gnl|CDD|224987
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter	unknown	unknown	gnl|CDD|224987
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|236472
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	unknown	unknown	gnl|CDD|380122
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|274208
NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein	unknown	unknown	gnl|CDD|340030
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|238828
NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein	unknown	unknown	gnl|CDD|379062
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.4e-16	52.9	4.6
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.7e-13	45.9	0.1
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	3.5e-103	340.5	0.0
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.3e-46	154.5	0.0
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	1.8e-24	81.8	0.0
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	5e-27	89.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	1.01798e-05
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.26966e-18
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.32002e-29
NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.3065e-20
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	8.86696e-08
NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter	gnl|CDD|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.35757e-17
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.32355e-19
NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter	gnl|CDD|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.44442e-19
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	0.000257607
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	gnl|CDD|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	2.00322e-05
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	gnl|CDD|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	1.08896e-107
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	gnl|CDD|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	1.16423e-12
NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein	gnl|CDD|340030	pfam17314, DUF5360, Family of unknown function (DUF5360). This is a family of unknown function. It is present in Bacteria and most of the family members are predicted to have 4 trans-membrane regions.	2.12509e-61
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.000668656
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	gnl|CDD|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	8.80927e-38
NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein	gnl|CDD|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	3.47606e-09
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.77423e-89
NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.03536e-59

Protein sequences

>NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPATVFVRFDAPGPVEATPRRLHAAWGRVLDLPEGVSPERAARLPALAHRPPHDQPGPKPYCLGDMTQTPDGLGVELRFLDDRLLETLDAWLAWGGVLPIGDGGQATTMLAAIEAQVLEHADWEDLAAQTASTAWDIHLLTPTVFTSRGHHVPEVTAASLATSLHARWRHWCRPLAPELPERERLTSVLITQDRTRRTVVGLGMPRADRRGRLSSRRIPASVGALRISAPAAGSITAVFSQLMALARYTSVGSHSAYGMGVIDVVADVP
>NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MKDSGREPGRKDSGKPGKAGKNDRNKRDRKLRDTLGNPFLWLVPFLLVVILGWAVFSSMFGYRTIDTSDGLTLLRDKPDTIKSITVVDGNQRVELDLTTTYVQPKKKGIESRPVGKKVEFSYTDAQAEQVDRLVQAAAPKEGFNSVVPTTSWWSSLVQLLVPALLLGGIMWWLIGRMGGGRGGAMGFGRSKAKVGSKEMPDVTFADVAGEDEAVEELEEIREFLSEPEKFRAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSMAASEFVEMFVGVGASRVRDLFDQAKENAPAIIFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFDANTNVILIAATNRPDVLDPALLRPGRFDRQVSVEAPDMAGRAAILKVHAKGKPLNDDVDLDLVAKRTPGFTGADLANVLNEAALLTARSNAHLIDNRALDEAIDRVIAGPQKRTRVMRDHEKRVTAYHEAGHALCAAAGAYSDPVTKVTILPRGRALGYTQVMPQDDKYSTTRNELLDQLVYAMGGRAAEEIIFRDPTTGASNDIEKATATARKMVTDYGMTSAVGAVKLGTTESETVLGLNATSRDFSEQVAATVDTEVRSLLDAAHREAWEILTRNRAVLDKLAEELLSRETLLEKDLERIFEGVIKQPERPLWRSDESLPVVEPAPASDEAGGEPDDSHGSDDYWGYNH
>NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE
MSYDAEGVRRAVHDLLVAIGEDPERDGLRDTPERMARAYAEMFAGLDQDPAEHVERVFDVGHEEMVLVRDIPMYSVCEHHLLPFHGLAHVGYIPSEDGRVTGLSKVARLVDGYARRPQVQERLTRQIADALVERLQCRGVLVVVEAEHLCMSMRGVRKPGSNTVTSAVRGIMRNAATRSEAMSLVLGRRS
>NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein
MDNINNPYTPNAGAAPEVLIGRDGQTEAFSILLQRLKRGRTEQSMIMTGLRGVGKTVLLNRFAELAEMAGWESIELEASKHDETAFRQSIFSKFRAALLHISPRRRWSERARHAAEVLSSFVLSIDQSGTFSVTWDVDPSEGYGDHGDLGLDLTDVFLAVGEVAKEKGTGIVLLIDEVQFLTTVQLESLIQAVHKSVQKKLPITFVGAGLPQIAELAGDAKSYAERLFKFPRIDSLTPEEARQALVGPAETENVSYDEDAVDLAVSLTHGYPYFIQELGYQAWIVASGNHITAEDISTAKDAYEAKLDGSFFRVRLDRATPLQTAYMRAMAELGSEPQKAADVASLMKRESSQVAPIRSQLIDMGLLYTPQHGYAAFTVPDFDKFMMRAVPYLEVPEIQHRRRRKK
>NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein
MSPTYKRLLVAVDAGLLLYWAAVFLNLIPEHLRFKDYSNQVIQAWNWSFFPLDVAAALTVFLGAHLTRVGSRIGDLVLTVGLMLTFCAGFMAISFWSFYRDFDPLWWGPNAVLMIVPALAFGSMVCRRLETAENRA
>NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter
MCAWPALGGAIISEVSATLALRQALNQPGFYVMVGIGYALAFILLSLTLKAGMPLGVAYGLWGALGVALTAVLSMLVFGEPITVLVALGIALIMAGVLLVEVGAQRAGTQDKEGEAS
>NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter
MSGLYLVAAIASETTGTLSLKLASDGRGLRWYGLVMAGYLGAFALLTLALKEGMALGVAYGIWSAGGVAVTAIASRLLFGEPLTRTMVAGIALIMAGVLLVELGSAH
>NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase
MPFPAFDTQTSFTWHPTQRTHLLHAGVAIFLLATSAALGVPHTPSAFLVTAMSLACLPLASRLPAAGAAASLAIAWFAANSPYDLGGIAVALPWGLCIMLLGRGLRRDMIYPLAFATTLSHLSATPTWYLGLIQTATIGVPCVVIGEVVRHHRLQANVAEQERRRKLDQQRRLVVSELHDTVVRDLSHAVMIAEQARLADPHNARLNQELAAIITPVRTAVEQLRRSLKAMSAAEGDDSLLLLAASPPPPLTDTIRAVRETLAHRDAHLTTHGTDLLDNPSIGPGVRQQLVRIIAELINNAAKYTPPSSTATLTIETDDNTLECMCTNPIDPGRPASTATSSQLGLFQAQQRIESLGGSLHTTHTIDRWTTIFTIPLQPISPMPTD
>NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase
MSAVAANLMQPTRYTTWRPTWRLHLAHASLAALITLFSIATTWPMSSIAVLSEIIGGLALALSSRFPWPGALLGSASAWTATVVLTDVPFSPGIIPWLCTAILVARGFSRMPAYSLVVFSLVILIADIQWNGASPPWFTLLQVSLFIGGGAITVAELIRSPRDQAERSLHTYRESMERQRLLVVTELHDTVVRDLTHAVMTAEQARLAHPQDAALAPELDAMTVAVRAAVEQMRHALRAMSDIRGGERLDIEATSAPRPLEAVISDAAAILGQRGAHLEVEGLELLGIPVIPPGVRLQLLRVLGELVSNMSKYTAPQGRARLVIESDGRSLEAMASNDVGLPGQVGGVWAGGGAPGSGVPGYDAFSSGLGLEGARRRVEALGGSLSVSQGEGRWTTVFSVPFQAVS
>NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor
MTVPNVTDAPAAPSQVLRVAIVDDDPFVLQALRAYLSSDERIEVTSTFSRAADALAFLHKIRVDVLLTDVRMPEMDGLELLTRVRRQWPRTAVVVLTSFDDDEAMVAALAQHANGFLLKDASPEEIIRAVIAASAGGTTISPAATSRLVTRHLRSPQTAQAPDVTEAEQAVLTLLCEGYSNAEIAEQLVVAESTVKTHVSHLMKKYDVPSRLKLVVAVHKTQGA
>NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein
MRSHRADLVMSPCSSAYRTGIGTDDAVDHLARLRDTGYRYVLRTDIEDYFPNLSIEDALAALSPIAGCPRTIDLIRLIARPRRARGERRTRNRGIAQGSCLSPILANLALTGVDRAMGDTGYGYARFADDIVICSPHEPDLLEALELLDSLLTPRRLRLNREKTAMTSFDEGFRYLGTDFSRSFPPVDPATTSRASRPGPGGLHRPRRRPRPRQPENRLIVDGADGLPQVSIPRRAVSRIVLTGAVGLSSGTRSGRRTTTSTSSSFPATAATWASSPAPARRPAPADS
>NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein
MVWHHAYNGIPAIRETEKNGAPLPEIYRDGILPASGHDHLSAERLSGKIEVSIRVATPTVPGFRTSDNRVVVASRSGDPEGARTWEDTTIPSTTLKGVLSSAFEAVTASRMRVFRGHDHLVTHRRTPEESTVLYPVLLVPKEGGSGFKVRVMLGKNLRPRNPEGWGKVKSVCAAVLPDNVESGVDFLESDGKWIYSGAKNENKREGDPVRAVGRINELRAAAPHRSVVEFTAEEERFYDVKRYIVSKVGGKYFSGVRDGRGKPVRGAYRGVVVRLTPPGGNRLIDTKCNEFIFFDSESNRTCLEVDDGVIDGLVEVIYSYVDNVRKLADRERRRKAAGLPLNDSGTRTSDAPNTIIVHDIINSKAEGLGFKADRESIRKYIKDQANLGQGLPLFASIDRGEVTALSISQVGRRTSARAVSPTELAADSNVSPALTYEEASAADRVWGFVADGKDVSRDQGAAFKGRISISSAVPDTASDDRRQWLQLPAQGSCGWVLPTLASPKPSAGAPYLRRPNGSVLDEKCTRNDAFQDEQVLIRKTYPTHRFLVNGLSRGHLPLADSVSSPPGPSETVVGSYLTPGAQFSTSISFENLTREELAVLVWLLNPGNLISKKEKNTKKKKFKTLGWKQVGYHHLGFGKPLGLGSVEIRAENIEVYEGRHFGQMYEDLSGCLGCAGAADIKPILRQSSMSDISNWLPPGFSQSLAVRAFVRSAYGWDDSDNNGNYPATGDPVSYPGASRPVGDDELSPIITWFQERERNRVKVSSGEVSRVDHAYDLPAIADPS
>NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein
MPEKTWEPEPLRQAVWKDVPGAGAEQPRGVELQRVLERAEDLGGEMNGVAYTTSGAYSVRRAGASGLTTLIERDGQAGSREEEIDLDTVFELRLWRVMDKETDDGGNVAGEDGVLAHELRWLNGSGAAEIVVGASREGLPGGSDCWVRDNSYLQHGEKGEVMDSIEVFTVEETYGNTVFTDELMTGRWG
>NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein
MRVTRYELTVHLVTDAPLHSGGVDEVVDRSRDPEDRTTVARRFARDGRGRPVLTGRSVKGALRAACQRFREEHGGAVGPTERELRQLWGDDGTRGAGSAAPLRASAITVHTVELPTEGYEGDEEHKVMLPTRMGNAIDRYWGSAGDTALFEHEYLPRGKELALTITAEAGLPDGVEVPQGDVAPPGPEQVEKLFAFIIGLIKDGRVAFGGRQNAGWGRVALSDSEKAWRLTKAEPGSWAGLEEWLSGAGGRSVDVAPVDCGGSGRMRIEITWDSPTGILVAEPQDDGSGEGADAGAADGAPGEAEGVDSEETKPARPLRAGPEETDPIVLPGSSVRGALRTRATRIARTILLAKKDPSTVADWSGAGVHEQLAQDPSLVRDLFGSTTHRGALTVLDTLAAEDGPSRKVTHNAGDRWTGGVADGLLYSEEVYDSTWNSIVLELDLDRLLTNARAGLGEPGGQEDSQGEDRSRAAFCLLGLVLAEMAAGTLPLGSRGTRGMGQVEVKAMAVTGGKGLGIENWSLKAEDGTGESLPRRILKGLRGVNSGIERNPRAGAGWEGWSSYLVGSSERPLEDKEERDA
>NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3
MSPSSPTSFPLSVTFHSDWGVTTGTGVAGGVDSVVEKDERGLPIVRATVLTGAVREQSLLAAQALDDGSGRSWRAFASALFGSDLAPRLGTFSDARLIDPPDDPTDLIHEVVSLSIDEKTGTAREDFLRIFERTGACRLRGEVTLSDVDRYGRPLTWSDEQRDAAELLLALSGLLVRAIGSNRAVGDGVCDVLIHADHEPGDTRAVKDWCRTQLGRWKERGAPQVPAADTTAAAAPVLQASRAPTAAGAFHEATLTIDLRTPVVSYEVPMSNEIRSLDFLRGTVLLPWVHRLITRTVAQTPGASEALVQEVRDAVVNGELLVSDGVVSYQGERGLAMPLVFSSPKVGQGAESQELKTAECEGDEEMRVCNRMRAEEPENEVHKPLRDGYVFPTAGAKGAPALIGRQSTAHDAATGAARDGQLYLVRALPAGLSLQATVTVSTRLYQRIGEQLEALAGTGHRARLGARRLSGTFGETECTLSAFAPSPAPQVVDAEDTTIWFTSDVLARSARLGPGGSLTDLLAAFERAGAPIELAEADGTRFNAGVRHRRVDSWSAASHQPRATRMAIQAGSVLKVRTTALERLAALAAVGIGELRAQGFGRFVVGHPLLEKETFTLRSLHGEDLAPTADGAAASEEAQR
>NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein
MELVLFDIHAKQRFIFSSTRLKENVGASFQITLLDSWVGESVAKLNLSAQWVSRSSGRLLLVLDCDSSARKLIGEVTRRAHAEAPEMDVSGVFVHMVGSYLSGDDLRAVDHVGYQYALNRSPALSRFAQMPFLLRANDSSLPAAPSYADSGEVAAPSSALEGRALSLPAQVKVRQANIARDHFLNLARVQRLLYEEDEKLARDPTKLEELLQTASEGGVGVPSKVAVIHIDGNGVGGVMRRLDEVLSEKSGALKGELEVPEGDSDALRVFVLKISERLDVAVKVAFRSAWERVAKLARKDAEDSNRRYTAIPVVPVILGGDDVTVITSGDYALPFAAAYLRYYEEATGNDPILRYLTPPEGQDTGPMTAAAGVAIVKRNFPFHIAYELAEKLVERAKKVGKTACPPCSTLDYHVLFDTTVLDASEALRGYESFTTRPFRLLNDEMSSVTSTRDDGFRTSGSGDGEDSTSAGFSPNDLRHEPWEATCRRVARFKGVPLGSTDESRNETNLEPFPRTRAARIRGLLSAAVRERAAHRDDDVTDAPTAEAADCETPGSEASEKKENWVPPSLVNAWNEWEAARKDVGDWIDTELGGLGAVFDLLELSDLLPPSSFELPLPRLGETTNTASEATE
>NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein
MSSAELQIDPYGPVFISYRHSDGKSIADRVSTLLKSVGVPVWIDSEAMQVGHIEKRVDRAIEQTISGAIVISTEDTAHSDVISKNEVPGFLQLLDNDPTFPICIINVNDKDAVREGLDYSAPDRRMRTVTVESDLRGPLSLIKQFGAEEEDLVALVGAMATERVKRIHQACQEKDDRIVRLGLYSWEESVDHALSGNYLDLRLAAPKSGDRFNREALKTFKDTLKETRKAVEYVSPSVLQIEGTAHLFLAFVLGTQFPETFVKRAIVRQSGENWGRENNGDQNESFLHLTDQRVCNESSAGRARVAVYLDLVAGRLDSAFTSFVEANKENIRYSARIGMREPGKIDPNDGARIAREASNMIRDLSGSHGAAHIDLMMRCPLPLAFLIGRNVNTLSFTVYEYERDNDRYVPMLDVDTFDRSNVITKVLV
>NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase
MTTFCAEHSISRKTFYVLRRRARLEGPAAVLEPRSRRPRSSPARLPEAVRSQALEVRAALERSGLDHGPISVHDKMASMGLKAPSPAWLARLFRDQGVARSEPSKRPRAAWRRFVYPAPNACWQLDATEYVITQGRKVVIFQLQDDHSRLAVASLVASSETSQAAIDVFDKGVAARGVPQRLLTDNGIALNPSRRGVTGRLVEHVRSLGVEPITSKPYHPSTQGKNERFHQTPFRYPDQQPLAASIAELQEQVDRFDLIYNTQRPHQGLPGRITPQQAWDATEVAQAPRPDRDTAPITPGGSAPQPDTTARHQVHRHKPIGATGQRELTVGRNGTVHISGIAFLVNRHLAASTVIAIWDTRTITFADPHGEVLIQYTWPPQGTSYVSHHPPDPTNQRGGRGRKRL
>NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein
MKKAVRRRAPRLVGLAGAVVLSSSLSIPMMAPVSAEPTSGDTFNTVAEMAQASGASGTLTTLGDEAPGDDGGLTYDVQSASPEGALGAVSVLLADGQWAVPQGLPAGPAAGADGAAANDVVARTQSFVNAGGSLVSDASRPTPLSGANVHAGGPAPYAITSSALVGMVLSGWDYSHTTYAADQNTQVGYRADVGQDLSGSWKPDDLAGWFHSQGRLWLNTDGSINPGDIVFFSNPLSGGPGDSGSAPAQSTVFANVYDVGIYVGNNQVVRASTGTAQAQTLDAQTMAEVALVARPQWSAPAGGAPAPADQQQRAGAGGGAGAGSTATPAPEASASASAQAKAQQGPAAGAPSSKGGSVPDGSSAGSQSSSGAGSSDHNEVVVGAGSSQDSKGRTSAAERPSAQSVRERWLPVTGVAIGVLSVAAILLSAGLIVLRLRRA
>NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase
MDATDMGSDLQQVLITEEQIGQRLDEMAAQIDADYAGRDPLLVGVLKGAVYVMADLSRRLHMSAPMDWMAVSSYGSGTKSSGVVRILKDLDTDVTDRHILIVEDVIDSGLTLSWLVGNLSSRGAASVEIATLLRKPDAAKVEVDVKYVGFDIPTEFVVGYGLDYAERYRNLPFIGTLRPEVYGG

Crispr_ID: NZ_CP014232_2

• CRISPR_ID: NZ_CP014232_2
• CRISPR_location: 625744-626575
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 11 spacers
• Cas_protein_info: cas6,RT,csm3gr7,cas10

Consensus repeat of NZ_CP014232_2

Consensus_repeat	Method
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CRT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACG	PILER-CR

spacers of NZ_CP014232_2

>2.1|625781|34|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT
CCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGA
>2.2|625852|37|NZ_CP014232|PILER-CR
CACGAGAACTCGCCAGTCATCAACTGAGCAGCCTTGG
>2.3|625926|36|NZ_CP014232|PILER-CR
TTGGCGCGCAACCAGGCAGGACTGCCGTAGGCAGAC
>2.4|625999|34|NZ_CP014232|PILER-CR
AGAATCATCCTGTCATACAGGTGCTCAGCGTAGC
>2.5|626070|35|NZ_CP014232|PILER-CR
GCAAGCGTGATAGAACAGGCCAGCAACCTTGTTCT
>2.6|625852|34|NZ_CP014232|CRISPRCasFinder,CRT
GAGAACTCGCCAGTCATCAACTGAGCAGCCTTGG
>2.7|625923|36|NZ_CP014232|CRISPRCasFinder,CRT
TTGGCGCGCAACCAGGCAGGACTGCCGTAGGCAGAC
>2.8|625996|34|NZ_CP014232|CRISPRCasFinder,CRT
AGAATCATCCTGTCATACAGGTGCTCAGCGTAGC
>2.9|626067|35|NZ_CP014232|CRISPRCasFinder,CRT
GCAAGCGTGATAGAACAGGCCAGCAACCTTGTTCT
>2.10|626139|36|NZ_CP014232|CRISPRCasFinder,CRT
CTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGC
>2.11|626212|35|NZ_CP014232|CRISPRCasFinder,CRT
TCCAGTGACGGATAGGCGCACGACCTTATTCTGTC
>2.12|626284|38|NZ_CP014232|CRISPRCasFinder,CRT
CTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACC
>2.13|626359|36|NZ_CP014232|CRISPRCasFinder,CRT
TCGCCATGCCGCAGATAATAGACAGCCTCCCCATAA
>2.14|626432|36|NZ_CP014232|CRISPRCasFinder,CRT
GTCGTCAATCTGCCGGTTGATCTCATTCATCCACGC
>2.15|626505|34|NZ_CP014232|CRISPRCasFinder,CRT
GCGATGTTCTCGGCCATCTGTCGCCATGCCTGAC
>2.16|626361|35|NZ_CP014232|PILER-CR
CGCCATGCCGCAGATAATAGACAGCCTCCCCATAA
>2.17|626434|35|NZ_CP014232|PILER-CR
TCGTCAATCTGCCGGTTGATCTCATTCATCCACGC

CRISPR arrays and Neighbor proteins around NZ_CP014232_2

CRISPR arrays

The CRISPR arrays of NZ_CP014232_2

>merge|NZ_CP014232|2|625744-626575|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACCCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGAGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACACGAGAACTCGCCAGTCATCAACTGAGCAGCCTTGGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTTGGCGCGCAACCAGGCAGGACTGCCGTAGGCAGACGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACAGAATCATCCTGTCATACAGGTGCTCAGCGTAGCGTCAGAAGGCACCCAGCACCAGAAGGTGCATTAAGACGCAAGCGTGATAGAACAGGCCAGCAACCTTGTTCTGTCAGAAAGCACCCAGCACCAGAAGGCGCATTAAGACCTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGCGTCAGAAGGCACCCAGCACCACAAGGTGCATTAAGACTCCAGTGACGGATAGGCGCACGACCTTATTCTGTCGTCAAAAAGCACTCAGCGCCAGAAGGTGCATTAAGACCTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACCATCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTCGCCATGCCGCAGATAATAGACAGCCTCCCCATAAGTCAGAAAGCACCCAGCATCAGAAGATGCATTAAGACGTCGTCAATCTGCCGGTTGATCTCATTCATCCACGCGTCAGAAAGCAACCAGCACCAGAAGGTGCATTAAGACGCGATGTTCTCGGCCATCTGTCGCCATGCCTGACGTCAGAAAGCACCCAGCACCAGAAGACACATCGAGAC

>NZ_CP014232|2|2|625744-626138|PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACAC	GAGAACTCGCCAGTCATCAACTGAGCAGCCTTGGGTC
AGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTTG	GCGCGCAACCAGGCAGGACTGCCGTAGGCAGACGTC
AGAAAGCACCCAGCACCAGAAGGTGCATTAAGACAGA	ATCATCCTGTCATACAGGTGCTCAGCGTAGCGTC
AGAAGGCACCCAGCACCAGAAGGTGCATTAAGACGCA	AGCGTGATAGAACAGGCCAGCAACCTTGTTCTGTC
AGAAAGCACCCAGCACCAGAAGGCGCATTAAGACCTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGCGTCAGAAGGCACCCAGCACCACAAGGTGCATTAAGACTCCAGTGACGGATAGGCGCACGACCTTATTCTGTCGTCAAAAAGCACTCAGCGCCAGAAGGTGCATTAAGACCTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACCATCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTC	GCCATGCCGCAGATAATAGACAGCCTCCCCATAAG
TCAGAAAGCACCCAGCATCAGAAGATGCATTAAGACGT	CGTCAATCTGCCGGTTGATCTCATTCATCCACGCG


>NZ_CP014232|2|2|625744-626575|CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACAC	GAGAACTCGCCAGTCATCAACTGAGCAGCCTTGG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TTGGCGCGCAACCAGGCAGGACTGCCGTAGGCAGAC
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	AGAATCATCCTGTCATACAGGTGCTCAGCGTAGC
GTCAGAAGGCACCCAGCACCAGAAGGTGCATTAAGAC	GCAAGCGTGATAGAACAGGCCAGCAACCTTGTTCT
GTCAGAAAGCACCCAGCACCAGAAGGCGCATTAAGAC	CTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGC
GTCAGAAGGCACCCAGCACCACAAGGTGCATTAAGAC	TCCAGTGACGGATAGGCGCACGACCTTATTCTGTC
GTCAAAAAGCACTCAGCGCCAGAAGGTGCATTAAGAC	CTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACC
ATCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TCGCCATGCCGCAGATAATAGACAGCCTCCCCATAA
GTCAGAAAGCACCCAGCATCAGAAGATGCATTAAGAC	GTCGTCAATCTGCCGGTTGATCTCATTCATCCACGC
GTCAGAAAGCAACCAGCACCAGAAGGTGCATTAAGAC	GCGATGTTCTCGGCCATCTGTCGCCATGCCTGAC
GTCAGAAAGCACCCAGCACCAGAAGACACATCGAGAC

>NZ_CP014232|2|2|625744-626575|CRT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACAC	GAGAACTCGCCAGTCATCAACTGAGCAGCCTTGG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TTGGCGCGCAACCAGGCAGGACTGCCGTAGGCAGAC
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	AGAATCATCCTGTCATACAGGTGCTCAGCGTAGC
GTCAGAAGGCACCCAGCACCAGAAGGTGCATTAAGAC	GCAAGCGTGATAGAACAGGCCAGCAACCTTGTTCT
GTCAGAAAGCACCCAGCACCAGAAGGCGCATTAAGAC	CTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGC
GTCAGAAGGCACCCAGCACCACAAGGTGCATTAAGAC	TCCAGTGACGGATAGGCGCACGACCTTATTCTGTC
GTCAAAAAGCACTCAGCGCCAGAAGGTGCATTAAGAC	CTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACC
ATCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TCGCCATGCCGCAGATAATAGACAGCCTCCCCATAA
GTCAGAAAGCACCCAGCATCAGAAGATGCATTAAGAC	GTCGTCAATCTGCCGGTTGATCTCATTCATCCACGC
GTCAGAAAGCAACCAGCACCAGAAGGTGCATTAAGAC	GCGATGTTCTCGGCCATCTGTCGCCATGCCTGAC
GTCAGAAAGCACCCAGCACCAGAAGACACATCGAGAC

>NZ_CP014232|2|3|626323-626505|PILER-CR
	CCCGGCAGGTGACCGCCCTCCGTGTACTGGTGGA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAACAC	GAGAACTCGCCAGTCATCAACTGAGCAGCCTTGGGTC
AGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTTG	GCGCGCAACCAGGCAGGACTGCCGTAGGCAGACGTC
AGAAAGCACCCAGCACCAGAAGGTGCATTAAGACAGA	ATCATCCTGTCATACAGGTGCTCAGCGTAGCGTC
AGAAGGCACCCAGCACCAGAAGGTGCATTAAGACGCA	AGCGTGATAGAACAGGCCAGCAACCTTGTTCTGTC
AGAAAGCACCCAGCACCAGAAGGCGCATTAAGACCTCTCCCACCCTGCCCGCAGGGACGGTGTACTCGGCGTCAGAAGGCACCCAGCACCACAAGGTGCATTAAGACTCCAGTGACGGATAGGCGCACGACCTTATTCTGTCGTCAAAAAGCACTCAGCGCCAGAAGGTGCATTAAGACCTCCTGTGCGCTTCCCACGCTCCCGCTGACTGACTACCATCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTC	GCCATGCCGCAGATAATAGACAGCCTCCCCATAAG
TCAGAAAGCACCCAGCATCAGAAGATGCATTAAGACGT	CGTCAATCTGCCGGTTGATCTCATTCATCCACGCG
TCAGAAAGCAACCAGCACCAGAAGGTGCATTAAGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187857
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter	unknown	unknown	gnl|CDD|224987
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter	unknown	unknown	gnl|CDD|224987
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|236472
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	unknown	unknown	gnl|CDD|380122
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|274208
NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein	unknown	unknown	gnl|CDD|340030
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|238828
NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein	unknown	unknown	gnl|CDD|379062
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.4e-16	52.9	4.6
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.7e-13	45.9	0.1
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	3.5e-103	340.5	0.0
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.3e-46	154.5	0.0
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	1.8e-24	81.8	0.0
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	5e-27	89.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	1.01798e-05
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.26966e-18
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.32002e-29
NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.3065e-20
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	8.86696e-08
NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter	gnl|CDD|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.35757e-17
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.32355e-19
NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter	gnl|CDD|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.44442e-19
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	0.000257607
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	gnl|CDD|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	2.00322e-05
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	gnl|CDD|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	1.08896e-107
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	gnl|CDD|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	1.16423e-12
NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein	gnl|CDD|340030	pfam17314, DUF5360, Family of unknown function (DUF5360). This is a family of unknown function. It is present in Bacteria and most of the family members are predicted to have 4 trans-membrane regions.	2.12509e-61
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.000668656
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	gnl|CDD|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	8.80927e-38
NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein	gnl|CDD|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	3.47606e-09
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.77423e-89
NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.03536e-59

Protein sequences

>NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPATVFVRFDAPGPVEATPRRLHAAWGRVLDLPEGVSPERAARLPALAHRPPHDQPGPKPYCLGDMTQTPDGLGVELRFLDDRLLETLDAWLAWGGVLPIGDGGQATTMLAAIEAQVLEHADWEDLAAQTASTAWDIHLLTPTVFTSRGHHVPEVTAASLATSLHARWRHWCRPLAPELPERERLTSVLITQDRTRRTVVGLGMPRADRRGRLSSRRIPASVGALRISAPAAGSITAVFSQLMALARYTSVGSHSAYGMGVIDVVADVP
>NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MKDSGREPGRKDSGKPGKAGKNDRNKRDRKLRDTLGNPFLWLVPFLLVVILGWAVFSSMFGYRTIDTSDGLTLLRDKPDTIKSITVVDGNQRVELDLTTTYVQPKKKGIESRPVGKKVEFSYTDAQAEQVDRLVQAAAPKEGFNSVVPTTSWWSSLVQLLVPALLLGGIMWWLIGRMGGGRGGAMGFGRSKAKVGSKEMPDVTFADVAGEDEAVEELEEIREFLSEPEKFRAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSMAASEFVEMFVGVGASRVRDLFDQAKENAPAIIFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFDANTNVILIAATNRPDVLDPALLRPGRFDRQVSVEAPDMAGRAAILKVHAKGKPLNDDVDLDLVAKRTPGFTGADLANVLNEAALLTARSNAHLIDNRALDEAIDRVIAGPQKRTRVMRDHEKRVTAYHEAGHALCAAAGAYSDPVTKVTILPRGRALGYTQVMPQDDKYSTTRNELLDQLVYAMGGRAAEEIIFRDPTTGASNDIEKATATARKMVTDYGMTSAVGAVKLGTTESETVLGLNATSRDFSEQVAATVDTEVRSLLDAAHREAWEILTRNRAVLDKLAEELLSRETLLEKDLERIFEGVIKQPERPLWRSDESLPVVEPAPASDEAGGEPDDSHGSDDYWGYNH
>NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE
MSYDAEGVRRAVHDLLVAIGEDPERDGLRDTPERMARAYAEMFAGLDQDPAEHVERVFDVGHEEMVLVRDIPMYSVCEHHLLPFHGLAHVGYIPSEDGRVTGLSKVARLVDGYARRPQVQERLTRQIADALVERLQCRGVLVVVEAEHLCMSMRGVRKPGSNTVTSAVRGIMRNAATRSEAMSLVLGRRS
>NZ_CP014232.1|WP_060956741.1|619565_620786_+|ATP-binding-protein
MDNINNPYTPNAGAAPEVLIGRDGQTEAFSILLQRLKRGRTEQSMIMTGLRGVGKTVLLNRFAELAEMAGWESIELEASKHDETAFRQSIFSKFRAALLHISPRRRWSERARHAAEVLSSFVLSIDQSGTFSVTWDVDPSEGYGDHGDLGLDLTDVFLAVGEVAKEKGTGIVLLIDEVQFLTTVQLESLIQAVHKSVQKKLPITFVGAGLPQIAELAGDAKSYAERLFKFPRIDSLTPEEARQALVGPAETENVSYDEDAVDLAVSLTHGYPYFIQELGYQAWIVASGNHITAEDISTAKDAYEAKLDGSFFRVRLDRATPLQTAYMRAMAELGSEPQKAADVASLMKRESSQVAPIRSQLIDMGLLYTPQHGYAAFTVPDFDKFMMRAVPYLEVPEIQHRRRRKK
>NZ_CP014232.1|WP_010614432.1|618877_619288_-|YvaD-family-protein
MSPTYKRLLVAVDAGLLLYWAAVFLNLIPEHLRFKDYSNQVIQAWNWSFFPLDVAAALTVFLGAHLTRVGSRIGDLVLTVGLMLTFCAGFMAISFWSFYRDFDPLWWGPNAVLMIVPALAFGSMVCRRLETAENRA
>NZ_CP014232.1|WP_060956740.1|618407_618761_-|multidrug-transporter
MCAWPALGGAIISEVSATLALRQALNQPGFYVMVGIGYALAFILLSLTLKAGMPLGVAYGLWGALGVALTAVLSMLVFGEPITVLVALGIALIMAGVLLVEVGAQRAGTQDKEGEAS
>NZ_CP014232.1|WP_060956739.1|618087_618411_-|multidrug-efflux-SMR-transporter
MSGLYLVAAIASETTGTLSLKLASDGRGLRWYGLVMAGYLGAFALLTLALKEGMALGVAYGIWSAGGVAVTAIASRLLFGEPLTRTMVAGIALIMAGVLLVELGSAH
>NZ_CP014232.1|WP_060958117.1|616567_617728_+|histidine-kinase
MPFPAFDTQTSFTWHPTQRTHLLHAGVAIFLLATSAALGVPHTPSAFLVTAMSLACLPLASRLPAAGAAASLAIAWFAANSPYDLGGIAVALPWGLCIMLLGRGLRRDMIYPLAFATTLSHLSATPTWYLGLIQTATIGVPCVVIGEVVRHHRLQANVAEQERRRKLDQQRRLVVSELHDTVVRDLSHAVMIAEQARLADPHNARLNQELAAIITPVRTAVEQLRRSLKAMSAAEGDDSLLLLAASPPPPLTDTIRAVRETLAHRDAHLTTHGTDLLDNPSIGPGVRQQLVRIIAELINNAAKYTPPSSTATLTIETDDNTLECMCTNPIDPGRPASTATSSQLGLFQAQQRIESLGGSLHTTHTIDRWTTIFTIPLQPISPMPTD
>NZ_CP014232.1|WP_060956738.1|615041_616262_+|histidine-kinase
MSAVAANLMQPTRYTTWRPTWRLHLAHASLAALITLFSIATTWPMSSIAVLSEIIGGLALALSSRFPWPGALLGSASAWTATVVLTDVPFSPGIIPWLCTAILVARGFSRMPAYSLVVFSLVILIADIQWNGASPPWFTLLQVSLFIGGGAITVAELIRSPRDQAERSLHTYRESMERQRLLVVTELHDTVVRDLTHAVMTAEQARLAHPQDAALAPELDAMTVAVRAAVEQMRHALRAMSDIRGGERLDIEATSAPRPLEAVISDAAAILGQRGAHLEVEGLELLGIPVIPPGVRLQLLRVLGELVSNMSKYTAPQGRARLVIESDGRSLEAMASNDVGLPGQVGGVWAGGGAPGSGVPGYDAFSSGLGLEGARRRVEALGGSLSVSQGEGRWTTVFSVPFQAVS
>NZ_CP014232.1|WP_003789125.1|614322_614997_-|response-regulator-transcription-factor
MTVPNVTDAPAAPSQVLRVAIVDDDPFVLQALRAYLSSDERIEVTSTFSRAADALAFLHKIRVDVLLTDVRMPEMDGLELLTRVRRQWPRTAVVVLTSFDDDEAMVAALAQHANGFLLKDASPEEIIRAVIAASAGGTTISPAATSRLVTRHLRSPQTAQAPDVTEAEQAVLTLLCEGYSNAEIAEQLVVAESTVKTHVSHLMKKYDVPSRLKLVVAVHKTQGA
>NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein
MRSHRADLVMSPCSSAYRTGIGTDDAVDHLARLRDTGYRYVLRTDIEDYFPNLSIEDALAALSPIAGCPRTIDLIRLIARPRRARGERRTRNRGIAQGSCLSPILANLALTGVDRAMGDTGYGYARFADDIVICSPHEPDLLEALELLDSLLTPRRLRLNREKTAMTSFDEGFRYLGTDFSRSFPPVDPATTSRASRPGPGGLHRPRRRPRPRQPENRLIVDGADGLPQVSIPRRAVSRIVLTGAVGLSSGTRSGRRTTTSTSSSFPATAATWASSPAPARRPAPADS
>NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein
MVWHHAYNGIPAIRETEKNGAPLPEIYRDGILPASGHDHLSAERLSGKIEVSIRVATPTVPGFRTSDNRVVVASRSGDPEGARTWEDTTIPSTTLKGVLSSAFEAVTASRMRVFRGHDHLVTHRRTPEESTVLYPVLLVPKEGGSGFKVRVMLGKNLRPRNPEGWGKVKSVCAAVLPDNVESGVDFLESDGKWIYSGAKNENKREGDPVRAVGRINELRAAAPHRSVVEFTAEEERFYDVKRYIVSKVGGKYFSGVRDGRGKPVRGAYRGVVVRLTPPGGNRLIDTKCNEFIFFDSESNRTCLEVDDGVIDGLVEVIYSYVDNVRKLADRERRRKAAGLPLNDSGTRTSDAPNTIIVHDIINSKAEGLGFKADRESIRKYIKDQANLGQGLPLFASIDRGEVTALSISQVGRRTSARAVSPTELAADSNVSPALTYEEASAADRVWGFVADGKDVSRDQGAAFKGRISISSAVPDTASDDRRQWLQLPAQGSCGWVLPTLASPKPSAGAPYLRRPNGSVLDEKCTRNDAFQDEQVLIRKTYPTHRFLVNGLSRGHLPLADSVSSPPGPSETVVGSYLTPGAQFSTSISFENLTREELAVLVWLLNPGNLISKKEKNTKKKKFKTLGWKQVGYHHLGFGKPLGLGSVEIRAENIEVYEGRHFGQMYEDLSGCLGCAGAADIKPILRQSSMSDISNWLPPGFSQSLAVRAFVRSAYGWDDSDNNGNYPATGDPVSYPGASRPVGDDELSPIITWFQERERNRVKVSSGEVSRVDHAYDLPAIADPS
>NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein
MPEKTWEPEPLRQAVWKDVPGAGAEQPRGVELQRVLERAEDLGGEMNGVAYTTSGAYSVRRAGASGLTTLIERDGQAGSREEEIDLDTVFELRLWRVMDKETDDGGNVAGEDGVLAHELRWLNGSGAAEIVVGASREGLPGGSDCWVRDNSYLQHGEKGEVMDSIEVFTVEETYGNTVFTDELMTGRWG
>NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein
MRVTRYELTVHLVTDAPLHSGGVDEVVDRSRDPEDRTTVARRFARDGRGRPVLTGRSVKGALRAACQRFREEHGGAVGPTERELRQLWGDDGTRGAGSAAPLRASAITVHTVELPTEGYEGDEEHKVMLPTRMGNAIDRYWGSAGDTALFEHEYLPRGKELALTITAEAGLPDGVEVPQGDVAPPGPEQVEKLFAFIIGLIKDGRVAFGGRQNAGWGRVALSDSEKAWRLTKAEPGSWAGLEEWLSGAGGRSVDVAPVDCGGSGRMRIEITWDSPTGILVAEPQDDGSGEGADAGAADGAPGEAEGVDSEETKPARPLRAGPEETDPIVLPGSSVRGALRTRATRIARTILLAKKDPSTVADWSGAGVHEQLAQDPSLVRDLFGSTTHRGALTVLDTLAAEDGPSRKVTHNAGDRWTGGVADGLLYSEEVYDSTWNSIVLELDLDRLLTNARAGLGEPGGQEDSQGEDRSRAAFCLLGLVLAEMAAGTLPLGSRGTRGMGQVEVKAMAVTGGKGLGIENWSLKAEDGTGESLPRRILKGLRGVNSGIERNPRAGAGWEGWSSYLVGSSERPLEDKEERDA
>NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3
MSPSSPTSFPLSVTFHSDWGVTTGTGVAGGVDSVVEKDERGLPIVRATVLTGAVREQSLLAAQALDDGSGRSWRAFASALFGSDLAPRLGTFSDARLIDPPDDPTDLIHEVVSLSIDEKTGTAREDFLRIFERTGACRLRGEVTLSDVDRYGRPLTWSDEQRDAAELLLALSGLLVRAIGSNRAVGDGVCDVLIHADHEPGDTRAVKDWCRTQLGRWKERGAPQVPAADTTAAAAPVLQASRAPTAAGAFHEATLTIDLRTPVVSYEVPMSNEIRSLDFLRGTVLLPWVHRLITRTVAQTPGASEALVQEVRDAVVNGELLVSDGVVSYQGERGLAMPLVFSSPKVGQGAESQELKTAECEGDEEMRVCNRMRAEEPENEVHKPLRDGYVFPTAGAKGAPALIGRQSTAHDAATGAARDGQLYLVRALPAGLSLQATVTVSTRLYQRIGEQLEALAGTGHRARLGARRLSGTFGETECTLSAFAPSPAPQVVDAEDTTIWFTSDVLARSARLGPGGSLTDLLAAFERAGAPIELAEADGTRFNAGVRHRRVDSWSAASHQPRATRMAIQAGSVLKVRTTALERLAALAAVGIGELRAQGFGRFVVGHPLLEKETFTLRSLHGEDLAPTADGAAASEEAQR
>NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein
MELVLFDIHAKQRFIFSSTRLKENVGASFQITLLDSWVGESVAKLNLSAQWVSRSSGRLLLVLDCDSSARKLIGEVTRRAHAEAPEMDVSGVFVHMVGSYLSGDDLRAVDHVGYQYALNRSPALSRFAQMPFLLRANDSSLPAAPSYADSGEVAAPSSALEGRALSLPAQVKVRQANIARDHFLNLARVQRLLYEEDEKLARDPTKLEELLQTASEGGVGVPSKVAVIHIDGNGVGGVMRRLDEVLSEKSGALKGELEVPEGDSDALRVFVLKISERLDVAVKVAFRSAWERVAKLARKDAEDSNRRYTAIPVVPVILGGDDVTVITSGDYALPFAAAYLRYYEEATGNDPILRYLTPPEGQDTGPMTAAAGVAIVKRNFPFHIAYELAEKLVERAKKVGKTACPPCSTLDYHVLFDTTVLDASEALRGYESFTTRPFRLLNDEMSSVTSTRDDGFRTSGSGDGEDSTSAGFSPNDLRHEPWEATCRRVARFKGVPLGSTDESRNETNLEPFPRTRAARIRGLLSAAVRERAAHRDDDVTDAPTAEAADCETPGSEASEKKENWVPPSLVNAWNEWEAARKDVGDWIDTELGGLGAVFDLLELSDLLPPSSFELPLPRLGETTNTASEATE
>NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein
MSSAELQIDPYGPVFISYRHSDGKSIADRVSTLLKSVGVPVWIDSEAMQVGHIEKRVDRAIEQTISGAIVISTEDTAHSDVISKNEVPGFLQLLDNDPTFPICIINVNDKDAVREGLDYSAPDRRMRTVTVESDLRGPLSLIKQFGAEEEDLVALVGAMATERVKRIHQACQEKDDRIVRLGLYSWEESVDHALSGNYLDLRLAAPKSGDRFNREALKTFKDTLKETRKAVEYVSPSVLQIEGTAHLFLAFVLGTQFPETFVKRAIVRQSGENWGRENNGDQNESFLHLTDQRVCNESSAGRARVAVYLDLVAGRLDSAFTSFVEANKENIRYSARIGMREPGKIDPNDGARIAREASNMIRDLSGSHGAAHIDLMMRCPLPLAFLIGRNVNTLSFTVYEYERDNDRYVPMLDVDTFDRSNVITKVLV
>NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase
MTTFCAEHSISRKTFYVLRRRARLEGPAAVLEPRSRRPRSSPARLPEAVRSQALEVRAALERSGLDHGPISVHDKMASMGLKAPSPAWLARLFRDQGVARSEPSKRPRAAWRRFVYPAPNACWQLDATEYVITQGRKVVIFQLQDDHSRLAVASLVASSETSQAAIDVFDKGVAARGVPQRLLTDNGIALNPSRRGVTGRLVEHVRSLGVEPITSKPYHPSTQGKNERFHQTPFRYPDQQPLAASIAELQEQVDRFDLIYNTQRPHQGLPGRITPQQAWDATEVAQAPRPDRDTAPITPGGSAPQPDTTARHQVHRHKPIGATGQRELTVGRNGTVHISGIAFLVNRHLAASTVIAIWDTRTITFADPHGEVLIQYTWPPQGTSYVSHHPPDPTNQRGGRGRKRL
>NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein
MKKAVRRRAPRLVGLAGAVVLSSSLSIPMMAPVSAEPTSGDTFNTVAEMAQASGASGTLTTLGDEAPGDDGGLTYDVQSASPEGALGAVSVLLADGQWAVPQGLPAGPAAGADGAAANDVVARTQSFVNAGGSLVSDASRPTPLSGANVHAGGPAPYAITSSALVGMVLSGWDYSHTTYAADQNTQVGYRADVGQDLSGSWKPDDLAGWFHSQGRLWLNTDGSINPGDIVFFSNPLSGGPGDSGSAPAQSTVFANVYDVGIYVGNNQVVRASTGTAQAQTLDAQTMAEVALVARPQWSAPAGGAPAPADQQQRAGAGGGAGAGSTATPAPEASASASAQAKAQQGPAAGAPSSKGGSVPDGSSAGSQSSSGAGSSDHNEVVVGAGSSQDSKGRTSAAERPSAQSVRERWLPVTGVAIGVLSVAAILLSAGLIVLRLRRA
>NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase
MDATDMGSDLQQVLITEEQIGQRLDEMAAQIDADYAGRDPLLVGVLKGAVYVMADLSRRLHMSAPMDWMAVSSYGSGTKSSGVVRILKDLDTDVTDRHILIVEDVIDSGLTLSWLVGNLSSRGAASVEIATLLRKPDAAKVEVDVKYVGFDIPTEFVVGYGLDYAERYRNLPFIGTLRPEVYGG

Crispr_ID: NZ_CP014232_3

• CRISPR_ID: NZ_CP014232_3
• CRISPR_location: 639681-641023
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 18 spacers
• Cas_protein_info: cas10,csm3gr7,RT,cas6

Consensus repeat of NZ_CP014232_3

Consensus_repeat	Method
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAA	CRT
GGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	PILER-CR

spacers of NZ_CP014232_3

>3.1|639718|37|NZ_CP014232|PILER-CR,CRISPRCasFinder
AGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
>3.2|639792|35|NZ_CP014232|PILER-CR,CRISPRCasFinder
CTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
>3.3|639864|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
>3.4|639937|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
>3.5|640010|31|NZ_CP014232|PILER-CR,CRISPRCasFinder
TCTCTCCTCGCTGATCGAAATATATGTGTGT
>3.6|640078|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
CAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
>3.7|640151|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
CTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
>3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder
TTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
>3.9|640296|37|NZ_CP014232|CRISPRCasFinder
ACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCT
>3.10|640370|40|NZ_CP014232|CRISPRCasFinder
TCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTT
>3.11|640447|36|NZ_CP014232|CRISPRCasFinder
GTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTG
>3.12|640520|35|NZ_CP014232|CRISPRCasFinder
TGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCT
>3.13|640592|36|NZ_CP014232|CRISPRCasFinder
TCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAG
>3.14|640665|35|NZ_CP014232|CRISPRCasFinder
TTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTC
>3.15|640737|35|NZ_CP014232|CRISPRCasFinder
TAATTGTGGCCCGCATTAATATCTGAGTCGATATG
>3.16|640809|36|NZ_CP014232|CRISPRCasFinder
TCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
>3.17|640882|31|NZ_CP014232|CRISPRCasFinder
GTAGCACAAGCCCCTATGAGGAGCTGCTCGG
>3.18|640950|37|NZ_CP014232|CRISPRCasFinder
ATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGA
>3.19|639705|50|NZ_CP014232|CRT
GGTGCATTAAGACAGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
>3.20|639779|48|NZ_CP014232|CRT
GGTGCATTAAGACCTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
>3.21|639851|49|NZ_CP014232|CRT
GGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
>3.22|639924|49|NZ_CP014232|CRT
GGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
>3.23|639997|44|NZ_CP014232|CRT
GGTGCATTAAGACTCTCTCCTCGCTGATCGAAATATATGTGTGT
>3.24|640065|49|NZ_CP014232|CRT
AGTGCATTAAGACCAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
>3.25|640138|49|NZ_CP014232|CRT
AGTGCATTAAGACCTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
>3.26|640211|48|NZ_CP014232|CRT
GGTGCATTAAGACTTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
>3.27|640283|50|NZ_CP014232|CRT
GGTGCATTAAGACACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCT
>3.28|640357|53|NZ_CP014232|CRT
GGTGCATTAAGACTCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTT
>3.29|640434|49|NZ_CP014232|CRT
GGTGTATTAAGACGTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTG
>3.30|640507|48|NZ_CP014232|CRT
GGTGCATTAAGACTGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCT
>3.31|640579|49|NZ_CP014232|CRT
GGTGCATTAAGACTCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAG
>3.32|640652|48|NZ_CP014232|CRT
GGTGCATTGAGACTTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTC
>3.33|640724|48|NZ_CP014232|CRT
GGTGCATTAAGACTAATTGTGGCCCGCATTAATATCTGAGTCGATATG
>3.34|640796|49|NZ_CP014232|CRT
GGTGCATTAAGACTCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
>3.35|640869|44|NZ_CP014232|CRT
GGTGTATTAAGACGTAGCACAAGCCCCTATGAGGAGCTGCTCGG
>3.36|640937|50|NZ_CP014232|CRT
GGTGCATTAAGACATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGA
>3.37|640738|34|NZ_CP014232|PILER-CR
TAATTGTGGCCCGCATTAATATCTGAGTCGATAT
>3.38|640810|35|NZ_CP014232|PILER-CR
TCCATCTCGAGAATGTAACCAGCGAAGAGTATCCA
>3.39|640883|30|NZ_CP014232|PILER-CR
GTAGCACAAGCCCCTATGAGGAGCTGCTCG

CRISPR arrays and Neighbor proteins around NZ_CP014232_3

CRISPR arrays

The CRISPR arrays of NZ_CP014232_3

>merge|NZ_CP014232|3|639681-641023|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCAGAAAGCACCAAGCACCAGAAGGTGCATTAAGACAGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACTGTCAGAAAGCGCCCAGCACCAGAAGGTGCATTAAGACCTGAACACTGGCAGCAACAACATCTCCGTCAAAGTGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAAGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAAGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTCTCTCCTCGCTGATCGAAATATATGTGTGTGTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGACCAGATCTCCGACACTCAGGAGGGGATGGCAATTCTGGTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGACCTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGCGTCAGAAAGTACCCAGCACCAGAAGGTGCATTAAGACTTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTTGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCTGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTTGTCTGAAAGCACTCAGCACCAGAAGGTGTATTAAGACGTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCTGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAGGTCAGAGCGCACCCAACACCACAAGGTGCATTGAGACTTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTCGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTAATTGTGGCCCGCATTAATATCTGAGTCGATATGGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAGGTCAGAAAGCACCTAGCACCAGAAGGTGTATTAAGACGTAGCACAAGCCCCTATGAGGAGCTGCTCGGGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGAGTCAGAAAGTACACACCACCAGAAGGCCTATTCACTG

>NZ_CP014232|3|4|639681-640295|PILER-CR
GTCAGAAAGCACCAAGCACCAGAAGGTGCATTAAGAC	AGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
GTCAGAAAGCGCCCAGCACCAGAAGGTGCATTAAGAC	CTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TCTCTCCTCGCTGATCGAAATATATGTGTGT
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
GTCAGAAAGTACCCAGCACCAGAAGGTGCATTAAGAC	TTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCTGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTTGTCTGAAAGCACTCAGCACCAGAAGGTGTATTAAGACGTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCTGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAGGTCAGAGCGCACCCAACACCACAAGGTGCATTGAGACTTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTCGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACT	AATTGTGGCCCGCATTAATATCTGAGTCGATATG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACT	CCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
GTCAGAAAGCACCTAGCACCAGAAGGTGTATTAAGACG	TAGCACAAGCCCCTATGAGGAGCTGCTCGG


>NZ_CP014232|3|3|639681-641023|CRISPRCasFinder
GTCAGAAAGCACCAAGCACCAGAAGGTGCATTAAGAC	AGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
GTCAGAAAGCGCCCAGCACCAGAAGGTGCATTAAGAC	CTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TCTCTCCTCGCTGATCGAAATATATGTGTGT
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
GTCAGAAAGTACCCAGCACCAGAAGGTGCATTAAGAC	TTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	ACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTT
GTCTGAAAGCACTCAGCACCAGAAGGTGTATTAAGAC	GTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTG
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCT
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAG
GTCAGAGCGCACCCAACACCACAAGGTGCATTGAGAC	TTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTC
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TAATTGTGGCCCGCATTAATATCTGAGTCGATATG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
GTCAGAAAGCACCTAGCACCAGAAGGTGTATTAAGAC	GTAGCACAAGCCCCTATGAGGAGCTGCTCGG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	ATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGA
GTCAGAAAGTACACACCACCAGAAGGCCTATTCACTG

>NZ_CP014232|3|3|639681-641010|CRT
GTCAGAAAGCACCAAGCACCAGAA	GGTGCATTAAGACAGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
GTCAGAAAGCGCCCAGCACCAGAA	GGTGCATTAAGACCTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACCCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACTCTCTCCTCGCTGATCGAAATATATGTGTGT
GTCAGAAAGCACCCAGCACCAGAA	AGTGCATTAAGACCAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
GTCAGAAAGCACCCAGCACCAGAA	AGTGCATTAAGACCTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
GTCAGAAAGTACCCAGCACCAGAA	GGTGCATTAAGACTTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCT
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACTCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTT
GTCTGAAAGCACTCAGCACCAGAA	GGTGTATTAAGACGTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTG
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACTGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCT
GTCAGAAAGCACCCAGCACCACAA	GGTGCATTAAGACTCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAG
GTCAGAGCGCACCCAACACCACAA	GGTGCATTGAGACTTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTC
GTCAGAAAGCACCCAGCACCAGAA	GGTGCATTAAGACTAATTGTGGCCCGCATTAATATCTGAGTCGATATG
GTCAGAAAGCACCCAGCACCACAA	GGTGCATTAAGACTCCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
GTCAGAAAGCACCTAGCACCAGAA	GGTGTATTAAGACGTAGCACAAGCCCCTATGAGGAGCTGCTCGG
GTCAGAAAGCACCCAGCACCACAA	GGTGCATTAAGACATGTCGCTGAGCTCGTAGAGGCGCATGAGTACCTCGA
GTCAGAAAGTACACACCACCAGAA

>NZ_CP014232|3|5|640700-640949|PILER-CR
	AGGTTCCCCCAGATGTTGCGCTGGAGGTATCCCCACT
GTCAGAAAGCGCCCAGCACCAGAAGGTGCATTAAGAC	CTGAACACTGGCAGCAACAACATCTCCGTCAAAGT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	CCCCCGGATCAGGGTTTGCCGACTGATAGAAGGCAA
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	TCTCTCCTCGCTGATCGAAATATATGTGTGT
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CAGATCTCCGACACTCAGGAGGGGATGGCAATTCTG
GTCAGAAAGCACCCAGCACCAGAAAGTGCATTAAGAC	CTCAACGCGAGGCTGATGACGGAGCGGGGTTTCCGC
GTCAGAAAGTACCCAGCACCAGAAGGTGCATTAAGAC	TTGAAGTCGCTCTTCCTGCTGGCAGTTGACGACTT
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACACCCAGGTGCGCATCGTCATGAACATCTCCTTGTCCTGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTCGATGCCAGGGTTGTAGTAGGTACCCATAGTTCTTTCTTGTCTGAAAGCACTCAGCACCAGAAGGTGTATTAAGACGTCTCCGTTCGTCACTGGGTGATGAGGTTGGGGTTGGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACTGGTTGCCTGACCGGCCACCCTCCTCAATCCGGCTGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTCTGACTCCCCGACCACCTGGAAGTAGCGCGGCCAGGTCAGAGCGCACCCAACACCACAAGGTGCATTGAGACTTTCAGTCCGACGCGCTTCCGCGTCGGCGTCCCTCGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACT	AATTGTGGCCCGCATTAATATCTGAGTCGATATG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACT	CCATCTCGAGAATGTAACCAGCGAAGAGTATCCAG
GTCAGAAAGCACCTAGCACCAGAAGGTGTATTAAGACG	TAGCACAAGCCCCTATGAGGAGCTGCTCGG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187857
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	unknown	unknown	gnl|CDD|380122
NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase	unknown	unknown	gnl|CDD|273555
NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase	unknown	unknown	gnl|CDD|234678
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl|CDD|200042
NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase	unknown	unknown	gnl|CDD|376376
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase	unknown	unknown	gnl|CDD|366353
NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase	unknown	unknown	gnl|CDD|271234
NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase	unknown	unknown	gnl|CDD|274833
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|274208
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|236472
NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|238828
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.4e-16	52.9	4.6
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.7e-13	45.9	0.1
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	3.5e-103	340.5	0.0
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.3e-46	154.5	0.0
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	1.8e-24	81.8	0.0
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	5e-27	89.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	1.01798e-05
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	gnl|CDD|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	1.16423e-12
NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase	gnl|CDD|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	2.77588e-177
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.32002e-29
NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl|CDD|200042	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family. In E. coli, this protein is known as penicillin binding protein 4 (dacB). A signal sequence is cleaved from a precursor form. The protein is described as periplasmic in E. coli (Gram-negative) and extracellular in Actinomadura R39 (Gram-positive). Unlike some other proteins with similar activity, it does not form transpeptidation. It is not essential for viability. This family is related to class A beta-lactamases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.14388e-47
NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase	gnl|CDD|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	1.11287e-81
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	8.86696e-08
NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	4.32016e-33
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.32355e-19
NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase	gnl|CDD|273555	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities. [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family].	0
NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase	gnl|CDD|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	1.69217e-97
NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase	gnl|CDD|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	1.8239e-57
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	0.000257607
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	gnl|CDD|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	2.00322e-05
NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE	gnl|CDD|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	1.08896e-107
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.000668656
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	gnl|CDD|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	8.80927e-38
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.77423e-89
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0

Protein sequences

>NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein
MSSAELQIDPYGPVFISYRHSDGKSIADRVSTLLKSVGVPVWIDSEAMQVGHIEKRVDRAIEQTISGAIVISTEDTAHSDVISKNEVPGFLQLLDNDPTFPICIINVNDKDAVREGLDYSAPDRRMRTVTVESDLRGPLSLIKQFGAEEEDLVALVGAMATERVKRIHQACQEKDDRIVRLGLYSWEESVDHALSGNYLDLRLAAPKSGDRFNREALKTFKDTLKETRKAVEYVSPSVLQIEGTAHLFLAFVLGTQFPETFVKRAIVRQSGENWGRENNGDQNESFLHLTDQRVCNESSAGRARVAVYLDLVAGRLDSAFTSFVEANKENIRYSARIGMREPGKIDPNDGARIAREASNMIRDLSGSHGAAHIDLMMRCPLPLAFLIGRNVNTLSFTVYEYERDNDRYVPMLDVDTFDRSNVITKVLV
>NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein
MELVLFDIHAKQRFIFSSTRLKENVGASFQITLLDSWVGESVAKLNLSAQWVSRSSGRLLLVLDCDSSARKLIGEVTRRAHAEAPEMDVSGVFVHMVGSYLSGDDLRAVDHVGYQYALNRSPALSRFAQMPFLLRANDSSLPAAPSYADSGEVAAPSSALEGRALSLPAQVKVRQANIARDHFLNLARVQRLLYEEDEKLARDPTKLEELLQTASEGGVGVPSKVAVIHIDGNGVGGVMRRLDEVLSEKSGALKGELEVPEGDSDALRVFVLKISERLDVAVKVAFRSAWERVAKLARKDAEDSNRRYTAIPVVPVILGGDDVTVITSGDYALPFAAAYLRYYEEATGNDPILRYLTPPEGQDTGPMTAAAGVAIVKRNFPFHIAYELAEKLVERAKKVGKTACPPCSTLDYHVLFDTTVLDASEALRGYESFTTRPFRLLNDEMSSVTSTRDDGFRTSGSGDGEDSTSAGFSPNDLRHEPWEATCRRVARFKGVPLGSTDESRNETNLEPFPRTRAARIRGLLSAAVRERAAHRDDDVTDAPTAEAADCETPGSEASEKKENWVPPSLVNAWNEWEAARKDVGDWIDTELGGLGAVFDLLELSDLLPPSSFELPLPRLGETTNTASEATE
>NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3
MSPSSPTSFPLSVTFHSDWGVTTGTGVAGGVDSVVEKDERGLPIVRATVLTGAVREQSLLAAQALDDGSGRSWRAFASALFGSDLAPRLGTFSDARLIDPPDDPTDLIHEVVSLSIDEKTGTAREDFLRIFERTGACRLRGEVTLSDVDRYGRPLTWSDEQRDAAELLLALSGLLVRAIGSNRAVGDGVCDVLIHADHEPGDTRAVKDWCRTQLGRWKERGAPQVPAADTTAAAAPVLQASRAPTAAGAFHEATLTIDLRTPVVSYEVPMSNEIRSLDFLRGTVLLPWVHRLITRTVAQTPGASEALVQEVRDAVVNGELLVSDGVVSYQGERGLAMPLVFSSPKVGQGAESQELKTAECEGDEEMRVCNRMRAEEPENEVHKPLRDGYVFPTAGAKGAPALIGRQSTAHDAATGAARDGQLYLVRALPAGLSLQATVTVSTRLYQRIGEQLEALAGTGHRARLGARRLSGTFGETECTLSAFAPSPAPQVVDAEDTTIWFTSDVLARSARLGPGGSLTDLLAAFERAGAPIELAEADGTRFNAGVRHRRVDSWSAASHQPRATRMAIQAGSVLKVRTTALERLAALAAVGIGELRAQGFGRFVVGHPLLEKETFTLRSLHGEDLAPTADGAAASEEAQR
>NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein
MRVTRYELTVHLVTDAPLHSGGVDEVVDRSRDPEDRTTVARRFARDGRGRPVLTGRSVKGALRAACQRFREEHGGAVGPTERELRQLWGDDGTRGAGSAAPLRASAITVHTVELPTEGYEGDEEHKVMLPTRMGNAIDRYWGSAGDTALFEHEYLPRGKELALTITAEAGLPDGVEVPQGDVAPPGPEQVEKLFAFIIGLIKDGRVAFGGRQNAGWGRVALSDSEKAWRLTKAEPGSWAGLEEWLSGAGGRSVDVAPVDCGGSGRMRIEITWDSPTGILVAEPQDDGSGEGADAGAADGAPGEAEGVDSEETKPARPLRAGPEETDPIVLPGSSVRGALRTRATRIARTILLAKKDPSTVADWSGAGVHEQLAQDPSLVRDLFGSTTHRGALTVLDTLAAEDGPSRKVTHNAGDRWTGGVADGLLYSEEVYDSTWNSIVLELDLDRLLTNARAGLGEPGGQEDSQGEDRSRAAFCLLGLVLAEMAAGTLPLGSRGTRGMGQVEVKAMAVTGGKGLGIENWSLKAEDGTGESLPRRILKGLRGVNSGIERNPRAGAGWEGWSSYLVGSSERPLEDKEERDA
>NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein
MPEKTWEPEPLRQAVWKDVPGAGAEQPRGVELQRVLERAEDLGGEMNGVAYTTSGAYSVRRAGASGLTTLIERDGQAGSREEEIDLDTVFELRLWRVMDKETDDGGNVAGEDGVLAHELRWLNGSGAAEIVVGASREGLPGGSDCWVRDNSYLQHGEKGEVMDSIEVFTVEETYGNTVFTDELMTGRWG
>NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein
MVWHHAYNGIPAIRETEKNGAPLPEIYRDGILPASGHDHLSAERLSGKIEVSIRVATPTVPGFRTSDNRVVVASRSGDPEGARTWEDTTIPSTTLKGVLSSAFEAVTASRMRVFRGHDHLVTHRRTPEESTVLYPVLLVPKEGGSGFKVRVMLGKNLRPRNPEGWGKVKSVCAAVLPDNVESGVDFLESDGKWIYSGAKNENKREGDPVRAVGRINELRAAAPHRSVVEFTAEEERFYDVKRYIVSKVGGKYFSGVRDGRGKPVRGAYRGVVVRLTPPGGNRLIDTKCNEFIFFDSESNRTCLEVDDGVIDGLVEVIYSYVDNVRKLADRERRRKAAGLPLNDSGTRTSDAPNTIIVHDIINSKAEGLGFKADRESIRKYIKDQANLGQGLPLFASIDRGEVTALSISQVGRRTSARAVSPTELAADSNVSPALTYEEASAADRVWGFVADGKDVSRDQGAAFKGRISISSAVPDTASDDRRQWLQLPAQGSCGWVLPTLASPKPSAGAPYLRRPNGSVLDEKCTRNDAFQDEQVLIRKTYPTHRFLVNGLSRGHLPLADSVSSPPGPSETVVGSYLTPGAQFSTSISFENLTREELAVLVWLLNPGNLISKKEKNTKKKKFKTLGWKQVGYHHLGFGKPLGLGSVEIRAENIEVYEGRHFGQMYEDLSGCLGCAGAADIKPILRQSSMSDISNWLPPGFSQSLAVRAFVRSAYGWDDSDNNGNYPATGDPVSYPGASRPVGDDELSPIITWFQERERNRVKVSSGEVSRVDHAYDLPAIADPS
>NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein
MRSHRADLVMSPCSSAYRTGIGTDDAVDHLARLRDTGYRYVLRTDIEDYFPNLSIEDALAALSPIAGCPRTIDLIRLIARPRRARGERRTRNRGIAQGSCLSPILANLALTGVDRAMGDTGYGYARFADDIVICSPHEPDLLEALELLDSLLTPRRLRLNREKTAMTSFDEGFRYLGTDFSRSFPPVDPATTSRASRPGPGGLHRPRRRPRPRQPENRLIVDGADGLPQVSIPRRAVSRIVLTGAVGLSSGTRSGRRTTTSTSSSFPATAATWASSPAPARRPAPADS
>NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPATVFVRFDAPGPVEATPRRLHAAWGRVLDLPEGVSPERAARLPALAHRPPHDQPGPKPYCLGDMTQTPDGLGVELRFLDDRLLETLDAWLAWGGVLPIGDGGQATTMLAAIEAQVLEHADWEDLAAQTASTAWDIHLLTPTVFTSRGHHVPEVTAASLATSLHARWRHWCRPLAPELPERERLTSVLITQDRTRRTVVGLGMPRADRRGRLSSRRIPASVGALRISAPAAGSITAVFSQLMALARYTSVGSHSAYGMGVIDVVADVP
>NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MKDSGREPGRKDSGKPGKAGKNDRNKRDRKLRDTLGNPFLWLVPFLLVVILGWAVFSSMFGYRTIDTSDGLTLLRDKPDTIKSITVVDGNQRVELDLTTTYVQPKKKGIESRPVGKKVEFSYTDAQAEQVDRLVQAAAPKEGFNSVVPTTSWWSSLVQLLVPALLLGGIMWWLIGRMGGGRGGAMGFGRSKAKVGSKEMPDVTFADVAGEDEAVEELEEIREFLSEPEKFRAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSMAASEFVEMFVGVGASRVRDLFDQAKENAPAIIFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFDANTNVILIAATNRPDVLDPALLRPGRFDRQVSVEAPDMAGRAAILKVHAKGKPLNDDVDLDLVAKRTPGFTGADLANVLNEAALLTARSNAHLIDNRALDEAIDRVIAGPQKRTRVMRDHEKRVTAYHEAGHALCAAAGAYSDPVTKVTILPRGRALGYTQVMPQDDKYSTTRNELLDQLVYAMGGRAAEEIIFRDPTTGASNDIEKATATARKMVTDYGMTSAVGAVKLGTTESETVLGLNATSRDFSEQVAATVDTEVRSLLDAAHREAWEILTRNRAVLDKLAEELLSRETLLEKDLERIFEGVIKQPERPLWRSDESLPVVEPAPASDEAGGEPDDSHGSDDYWGYNH
>NZ_CP014232.1|WP_020991919.1|620846_621419_-|GTP-cyclohydrolase-I-FolE
MSYDAEGVRRAVHDLLVAIGEDPERDGLRDTPERMARAYAEMFAGLDQDPAEHVERVFDVGHEEMVLVRDIPMYSVCEHHLLPFHGLAHVGYIPSEDGRVTGLSKVARLVDGYARRPQVQERLTRQIADALVERLQCRGVLVVVEAEHLCMSMRGVRKPGSNTVTSAVRGIMRNAATRSEAMSLVLGRRS
>NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase
MTTFCAEHSISRKTFYVLRRRARLEGPAAVLEPRSRRPRSSPARLPEAVRSQALEVRAALERSGLDHGPISVHDKMASMGLKAPSPAWLARLFRDQGVARSEPSKRPRAAWRRFVYPAPNACWQLDATEYVITQGRKVVIFQLQDDHSRLAVASLVASSETSQAAIDVFDKGVAARGVPQRLLTDNGIALNPSRRGVTGRLVEHVRSLGVEPITSKPYHPSTQGKNERFHQTPFRYPDQQPLAASIAELQEQVDRFDLIYNTQRPHQGLPGRITPQQAWDATEVAQAPRPDRDTAPITPGGSAPQPDTTARHQVHRHKPIGATGQRELTVGRNGTVHISGIAFLVNRHLAASTVIAIWDTRTITFADPHGEVLIQYTWPPQGTSYVSHHPPDPTNQRGGRGRKRL
>NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein
MKKAVRRRAPRLVGLAGAVVLSSSLSIPMMAPVSAEPTSGDTFNTVAEMAQASGASGTLTTLGDEAPGDDGGLTYDVQSASPEGALGAVSVLLADGQWAVPQGLPAGPAAGADGAAANDVVARTQSFVNAGGSLVSDASRPTPLSGANVHAGGPAPYAITSSALVGMVLSGWDYSHTTYAADQNTQVGYRADVGQDLSGSWKPDDLAGWFHSQGRLWLNTDGSINPGDIVFFSNPLSGGPGDSGSAPAQSTVFANVYDVGIYVGNNQVVRASTGTAQAQTLDAQTMAEVALVARPQWSAPAGGAPAPADQQQRAGAGGGAGAGSTATPAPEASASASAQAKAQQGPAAGAPSSKGGSVPDGSSAGSQSSSGAGSSDHNEVVVGAGSSQDSKGRTSAAERPSAQSVRERWLPVTGVAIGVLSVAAILLSAGLIVLRLRRA
>NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase
MDATDMGSDLQQVLITEEQIGQRLDEMAAQIDADYAGRDPLLVGVLKGAVYVMADLSRRLHMSAPMDWMAVSSYGSGTKSSGVVRILKDLDTDVTDRHILIVEDVIDSGLTLSWLVGNLSSRGAASVEIATLLRKPDAAKVEVDVKYVGFDIPTEFVVGYGLDYAERYRNLPFIGTLRPEVYGG
>NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase
MTTQGTAAGLVDWRTVERLTALIPAGPSASRSARASSVAVLRRSAQEAPAWVARITGLNRAAQQVAETTRVSVVDRAGLVRASSRALRGLMEQVPAPPASEAIQLVGAAEVAGAMSLLATRLLGQVVPAAPSGTSGHGGGSAGPAHPSGEGDGEGDDVVTPATESARDVTTGGGWDGAASPHLLLVAPNVLAVRRQMDLDMLDLPAWVCLHEMTHAVQLAAAPWLGPYLSDSMRMVIGAVVEAAYGSADGARSAGGGSRQERGSRPRRGRAVRLAARAGRGRVLEGLMNVTDRAEVASLAAALTFLEGHAEVVLDDVHPNRMPSVHRLRAVLSRSRAADGGIGPGPGLGSLLLHRLMGLEAKEAQYADGAAFVRSVVTRIGHEGLNAVWADPELLPTPAELARPDVWVRRVS
>NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MRKVQTAALTAASLLVFGGYYSLGDALDLLPGPVTVAYADVAPRPFPTPAAPSAKTAAPSGLDQGAPTPSKNALNGYIQGVVSDAALTGGNVTASVVDVATGEELLDRSAASGVTPASTNKLLTAWAALSSMGPGHTLQTKAVLEGQTLTLVGGGDVLLAENEGDPNATAGHAGLGDLARATAEKLKSQGTTSVSLRLDDTLFTGPQWNDKWEAGNEQYVAKIQPIMVDVSATQNQGYPDDPAMGAAQAFAKHLSEAGITVDGEPTRAAASGGAREVASVSSAPLSDILALSLKTSDNTMTEVEGRLVAAHAKETTDFSGASKAVLAQLSKDGFDTSGVTLLDSSGLAKGNKVPARLLTQILTKAAGGEGGSAGRTLIADLPVAALDGTLGNRLHDTSAAGTVRAKTGSLEQTASLAGVVTTADGRQLAFAVMANGFPANGGGAAAAAIDNHFVAPLASCGCS
>NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase
MEFDVTIEIPKGNRNKYEIDHETGRIRLDRMLFTSTRYPDDYGYIDGTLGEDGDPLDALVLLEEPTFPGCVIRCRALGMFRMRDEKGGDDKVLCVPSADQRASWRTDIEDVSEFHRLEIQHFFEVYKDLEPGKSVEGAHWVGREEAEEEIRQSFQREADRVAHEGH
>NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase
MSPIPPRRHGHGVVATAVVALACTLAPSVLADPVDQSDIDRSKASERSTSTSIASLEAQLAQESSNLEDAQIKAQVANEDYLTAVDELNTATKDAQTAQTNADAAASSTAAARSDLGSIVVQTYQESGNPLDPLTPYLTSESLADLADADVALTRAGEKNNAKVQNVEALEAVATSMQTIADQKVTAKEAAKTSAATAKSDAEAAANDAQNAVTTTRTNRQNLIVQLAAQRNTTVELETKYQNQVEAERKAREEAAAQAAAKAASEKAAADLAQKQAEQAAAQPQESAPAPQEQSSQPSPSPQSSAQEPATTSQPEPEAAEEEEAAPAPAPAPEPAPAPSHSGSAASTAINAAMGYLGTPYVWAGESAAGLDCSGLTMVSYAAAGVELTHSSRVQYGEGSLVPLDAAQPGDLVFWSSDGSQSGIYHVAIYLGDDTMIEAPTFGMTVRVTSMRYSGVMPYAVRL
>NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase
MTDQHPTAPEAALQSTQPAPSPTSPAGWRFETKQVQAGHDPMSEPAHARAIPIYQTSSYVFESAEQAAARFALTDLGPIYTRLTNPTNDIVEQRIAALEGGVGALLTSSGQAATTLALVTLGGAGDNIVASPSLYGGTTNLLTHTLPRLGIEARFVDEPGDPAAWAALADERTVAFFGESIPNPRGDILDIEAIAAAAHELGIPLVVDNTVASPFLTRPFEWGADIVVASATKFLGGHGSSVAGVIVDSGSFDFAAQPERFPGFNTPDESYHGLVYARDLGVGSPLGANLAFILKARAEGQRDLGFTLAPHSAFLIAQGIETLSLRMERHVDNALAVATWLEGRDDVASVRYSGLASSPYYERHRKYCPRGAGSILTFDLAGGREAGAAFIDALSLFSNLANIGDVRSLAIHPATTTHSQLDDAGLAAAGISAGTVRLSVGIEHIDDILADLERGLAAARAVGAGEPSAAAGA
>NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase
MSATTSSSYPVSSGSTETEPAAFGVGTASSKLVDRKAGSPTGAWRPGDEPGHRRFLEIGDLPLESGEVLPNTVLAFETWGELSPQRDNAVLVLHALTGDSHVTGEAGPGHPTPGWWSDLVGPGRAIDTERYFVVAANILGGCQGSTGPSSTAPDGRPWGSRFPWLTTRDAVEAEARLADALGIEVFHLVIGASLGGHRAIEWGVTHPQRVRNLALVATGASTTADQLAWCHLQELAIVADPFFFDGDYYSHSVGPVRGLGLARALAHTTYRSAAELDERFGRRHQGEEDPAVGGRYQVESYLDYHAGKLLARFDANTYLIVTHSMMVHDVGTGRGGIEAALARVQARTLVVDVDSDRLFLPAQAEELAGGIPGARRETISSLHGHDGFLIEAEQMDAILRDFLAGA
>NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase
MTSHSPFSRRRLPALLGSLPLAATGLIAAAPPAHAVPTSDGLADVTITQVNAPADGLYSVGDVMTFNITLTNTSGEAHSYAPASTNLSGNVSKCRWRNVPAGTTKTDCTGLATHTVTAEDLKAGGFTPQIAYEVKAVEYAGKALSTPETIKGATSPVKANSLRVESITPSSSQENYKLGDTVSYTVRVRSVSDKTINVAATESSFDDLGRQCHWGGLKPGKGAVYNCKPLTHTITQADVDAGRWTPSITLTATGTDGATLQTLTATGNPINVVGDHPQATPAPAPDASTELPASMSQAQHLAANTATDNYRIPAITTAPNGDLLISYDERPKDNGNGGSDAPNPNHIVQRRSTDGGKTWSAPTYIHQGTETGKKVGYSDPSYVVDHQTGTIFNFHVKSYDQGWGGSRGGTDPENRGIIQAEVSTSTDNGWTWTHRTITADITKDKPWTARFAASGQGIQIQHGPHAGRLVQQYTIRTAGGAVQAVSVYSDDHGKTWQAGTPIGTGMDENKVVELSDGSLMLNSRASDGSGFRKVAHSTDGGQTWSEPVSDKNLPDSVDNAQIIRAFPNAAPDDPRAKVLLLSHSPNPRPWSRDRGTISMSCDDGASWTTSKVFHEPFVGYTTIAVQSDGSIGLLSEDAHNGADYGGIWYRNFTMNWLGEQCGQKPAEPSPAPSPTAAPSAAPTEKPAPSAAPSAEPTQAPAPSSAPEPSAAPEPSSAPAPEPTTAPSTEPTPAPAPSSAPEQTDGPTAAPAPETSSAPAAEPTQAPTVAPSVEPTQAPGAQPSSAPKPGATGRAPSVVNPKATGAATEPGTPSSSASPAPSRNAAPTPKPGMEPDEIDRPSDGTMAQPTGGASAPSAAPTQAAKAGSRLSRTGTNALLILGLAGVAVVGGYLLLRARRSKN

Crispr_ID: NZ_CP014232_4

• CRISPR_ID: NZ_CP014232_4
• CRISPR_location: 643049-643740
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 9 spacers
• Cas_protein_info: cas10,csm3gr7,RT,cas6

Consensus repeat of NZ_CP014232_4

Consensus_repeat	Method
GGTCAGAAAGCACCCAGCACCANAAGGTGCATTAAGAC	CRT
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	PILER-CR
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	CRISPRCasFinder

spacers of NZ_CP014232_4

>4.1|643087|32|NZ_CP014232|CRT
GCACTGAACGCCGCAGCGGCGTAGGACTTGCC
>4.2|643157|36|NZ_CP014232|CRT
TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCT
>4.3|643231|35|NZ_CP014232|CRT
TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGC
>4.4|643304|35|NZ_CP014232|CRT
ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATA
>4.5|643377|35|NZ_CP014232|CRT
TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTA
>4.6|643450|37|NZ_CP014232|CRT
TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCT
>4.7|643525|36|NZ_CP014232|CRT
GCTGCTGTGGCACATGCAGAGAACATGATGATGCCA
>4.8|643599|33|NZ_CP014232|CRT
TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGC
>4.9|643670|33|NZ_CP014232|CRT
CTGTAGCGCGTGGCGTAAAGCCTGTGTGCAGCT
>4.10|643087|33|NZ_CP014232|PILER-CR,CRISPRCasFinder
GCACTGAACGCCGCAGCGGCGTAGGACTTGCCG
>4.11|643157|37|NZ_CP014232|PILER-CR,CRISPRCasFinder
TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCTG
>4.12|643231|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGCA
>4.13|643304|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATAC
>4.14|643377|36|NZ_CP014232|PILER-CR,CRISPRCasFinder
TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTAG
>4.15|643450|38|NZ_CP014232|PILER-CR,CRISPRCasFinder
TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCTG
>4.16|643525|37|NZ_CP014232|PILER-CR,CRISPRCasFinder
GCTGCTGTGGCACATGCAGAGAACATGATGATGCCAG
>4.17|643599|34|NZ_CP014232|PILER-CR,CRISPRCasFinder
TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGCG

CRISPR arrays and Neighbor proteins around NZ_CP014232_4

CRISPR arrays

The CRISPR arrays of NZ_CP014232_4

>merge|NZ_CP014232|4|643049-643740|CRT,PILER-CR,CRISPRCasFinder
GGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGACGCACTGAACGCCGCAGCGGCGTAGGACTTGCCGGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCTGGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGCAGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATACGTCAGAAAGCACCCAGCACCAGACGGTGCATTAAGACTTCATCGCTCGACGTTGCTGCAATACCAGTTTGTAGGTCAGAAAGCGCCCAGCACCAGAAGGCGCATTAAGACTGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCTGGTCAGAACGCACCCAGCACCACAAGGTGCATTAAGACGCTGCTGTGGCACATGCAGAGAACATGATGATGCCAGGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGACTTAGTGGGCAGCGTTCTCTCGTCTGACAGATGCGGTCAGAAAGCACCCAGCACCAAAAGGTGCATTAAGACCTGTAGCGCGTGGCGTAAAGCCTGTGTGCAGCTGGTCAGAAAACACCCAGCATCAGAAGCGCCTATTTACG

>NZ_CP014232|4|4|643049-643740|CRT
GGTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GCACTGAACGCCGCAGCGGCGTAGGACTTGCC
GGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCT
GGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGC
AGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATA
CGTCAGAAAGCACCCAGCACCAGACGGTGCATTAAGAC	TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTA
GGTCAGAAAGCGCCCAGCACCAGAAGGCGCATTAAGAC	TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCT
GGTCAGAACGCACCCAGCACCACAAGGTGCATTAAGAC	GCTGCTGTGGCACATGCAGAGAACATGATGATGCCA
GGTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGC
GGTCAGAAAGCACCCAGCACCAAAAGGTGCATTAAGAC	CTGTAGCGCGTGGCGTAAAGCCTGTGTGCAGCT
GGTCAGAAAACACCCAGCATCAGAAGCGCCTATTTACG

>NZ_CP014232|4|6|643050-643669|PILER-CR
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GCACTGAACGCCGCAGCGGCGTAGGACTTGCCG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCTG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGCA
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATAC
GTCAGAAAGCACCCAGCACCAGACGGTGCATTAAGAC	TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTAG
GTCAGAAAGCGCCCAGCACCAGAAGGCGCATTAAGAC	TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCTG
GTCAGAACGCACCCAGCACCACAAGGTGCATTAAGAC	GCTGCTGTGGCACATGCAGAGAACATGATGATGCCAG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGCG
GTCAGAAAGCACCCAGCACCAAAAGGTGCATTAAGAC

>NZ_CP014232|4|4|643050-643669|CRISPRCasFinder
GTCAGAAAGCACCCAGCACCAGAAGGTGCATTAAGAC	GCACTGAACGCCGCAGCGGCGTAGGACTTGCCG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TATTCAGCAAAGAGCTGATCCTGGGTGCGCTTATCTG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTCAAGCTCGCTCAGGGCATGCAATGTGTATGAGCA
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	ACTTGTCTTATCGTTGTCCGCGAGATGCGAGTATAC
GTCAGAAAGCACCCAGCACCAGACGGTGCATTAAGAC	TTCATCGCTCGACGTTGCTGCAATACCAGTTTGTAG
GTCAGAAAGCGCCCAGCACCAGAAGGCGCATTAAGAC	TGAACGCCCCGCCGGCCACCATCACGAACCGGGTCCTG
GTCAGAACGCACCCAGCACCACAAGGTGCATTAAGAC	GCTGCTGTGGCACATGCAGAGAACATGATGATGCCAG
GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC	TTAGTGGGCAGCGTTCTCTCGTCTGACAGATGCG
GTCAGAAAGCACCCAGCACCAAAAGGTGCATTAAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187857
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase	unknown	unknown	gnl|CDD|234678
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NZ_CP014232.1|WP_081093036.1|657967_658090_-|hypothetical-protein	unknown	unknown	gnl|CDD|171099
NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl|CDD|200042
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase	unknown	unknown	gnl|CDD|366353
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase	unknown	unknown	gnl|CDD|273555
NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase	unknown	unknown	gnl|CDD|271234
NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase	unknown	unknown	gnl|CDD|274833
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|274208
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	unknown	unknown	gnl|CDD|380122
NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase	unknown	unknown	gnl|CDD|376376
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|238828

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	7.4e-16	52.9	4.6
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	1.7e-13	45.9	0.1
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	3.5e-103	340.5	0.0
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	1.3e-46	154.5	0.0
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	1.8e-24	81.8	0.0
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	5e-27	89.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3	gnl|CDD|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	1.01798e-05
NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase	gnl|CDD|234678	PRK00175, metX, homoserine O-acetyltransferase; Provisional.	2.77588e-177
NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.32002e-29
NZ_CP014232.1|WP_081093036.1|657967_658090_-|hypothetical-protein	gnl|CDD|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	1.34849e-05
NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl|CDD|200042	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family. In E. coli, this protein is known as penicillin binding protein 4 (dacB). A signal sequence is cleaved from a precursor form. The protein is described as periplasmic in E. coli (Gram-negative) and extracellular in Actinomadura R39 (Gram-positive). Unlike some other proteins with similar activity, it does not form transpeptidation. It is not essential for viability. This family is related to class A beta-lactamases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.14388e-47
NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase	gnl|CDD|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	1.11287e-81
NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	8.86696e-08
NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	4.32016e-33
NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.32355e-19
NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase	gnl|CDD|273555	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities. [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family].	0
NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase	gnl|CDD|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	1.69217e-97
NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase	gnl|CDD|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	1.8239e-57
NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	0.000257607
NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein	gnl|CDD|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	2.00322e-05
NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein	gnl|CDD|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	1.16423e-12
NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.000668656
NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.77423e-89
NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein	gnl|CDD|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	8.80927e-38

Protein sequences

>NZ_CP014232.1|WP_081093034.1|641278_642496_-|DDE-type-integrase/transposase/recombinase
MTTFCAEHSISRKTFYVLRRRARLEGPAAVLEPRSRRPRSSPARLPEAVRSQALEVRAALERSGLDHGPISVHDKMASMGLKAPSPAWLARLFRDQGVARSEPSKRPRAAWRRFVYPAPNACWQLDATEYVITQGRKVVIFQLQDDHSRLAVASLVASSETSQAAIDVFDKGVAARGVPQRLLTDNGIALNPSRRGVTGRLVEHVRSLGVEPITSKPYHPSTQGKNERFHQTPFRYPDQQPLAASIAELQEQVDRFDLIYNTQRPHQGLPGRITPQQAWDATEVAQAPRPDRDTAPITPGGSAPQPDTTARHQVHRHKPIGATGQRELTVGRNGTVHISGIAFLVNRHLAASTVIAIWDTRTITFADPHGEVLIQYTWPPQGTSYVSHHPPDPTNQRGGRGRKRL
>NZ_CP014232.1|WP_081093033.1|637098_638385_-|SAVED-domain-containing-protein
MSSAELQIDPYGPVFISYRHSDGKSIADRVSTLLKSVGVPVWIDSEAMQVGHIEKRVDRAIEQTISGAIVISTEDTAHSDVISKNEVPGFLQLLDNDPTFPICIINVNDKDAVREGLDYSAPDRRMRTVTVESDLRGPLSLIKQFGAEEEDLVALVGAMATERVKRIHQACQEKDDRIVRLGLYSWEESVDHALSGNYLDLRLAAPKSGDRFNREALKTFKDTLKETRKAVEYVSPSVLQIEGTAHLFLAFVLGTQFPETFVKRAIVRQSGENWGRENNGDQNESFLHLTDQRVCNESSAGRARVAVYLDLVAGRLDSAFTSFVEANKENIRYSARIGMREPGKIDPNDGARIAREASNMIRDLSGSHGAAHIDLMMRCPLPLAFLIGRNVNTLSFTVYEYERDNDRYVPMLDVDTFDRSNVITKVLV
>NZ_CP014232.1|WP_060958118.1|635159_637055_-|hypothetical-protein
MELVLFDIHAKQRFIFSSTRLKENVGASFQITLLDSWVGESVAKLNLSAQWVSRSSGRLLLVLDCDSSARKLIGEVTRRAHAEAPEMDVSGVFVHMVGSYLSGDDLRAVDHVGYQYALNRSPALSRFAQMPFLLRANDSSLPAAPSYADSGEVAAPSSALEGRALSLPAQVKVRQANIARDHFLNLARVQRLLYEEDEKLARDPTKLEELLQTASEGGVGVPSKVAVIHIDGNGVGGVMRRLDEVLSEKSGALKGELEVPEGDSDALRVFVLKISERLDVAVKVAFRSAWERVAKLARKDAEDSNRRYTAIPVVPVILGGDDVTVITSGDYALPFAAAYLRYYEEATGNDPILRYLTPPEGQDTGPMTAAAGVAIVKRNFPFHIAYELAEKLVERAKKVGKTACPPCSTLDYHVLFDTTVLDASEALRGYESFTTRPFRLLNDEMSSVTSTRDDGFRTSGSGDGEDSTSAGFSPNDLRHEPWEATCRRVARFKGVPLGSTDESRNETNLEPFPRTRAARIRGLLSAAVRERAAHRDDDVTDAPTAEAADCETPGSEASEKKENWVPPSLVNAWNEWEAARKDVGDWIDTELGGLGAVFDLLELSDLLPPSSFELPLPRLGETTNTASEATE
>NZ_CP014232.1|WP_060956747.1|633240_635163_-|CRISPR-associated-protein-Cmr3
MSPSSPTSFPLSVTFHSDWGVTTGTGVAGGVDSVVEKDERGLPIVRATVLTGAVREQSLLAAQALDDGSGRSWRAFASALFGSDLAPRLGTFSDARLIDPPDDPTDLIHEVVSLSIDEKTGTAREDFLRIFERTGACRLRGEVTLSDVDRYGRPLTWSDEQRDAAELLLALSGLLVRAIGSNRAVGDGVCDVLIHADHEPGDTRAVKDWCRTQLGRWKERGAPQVPAADTTAAAAPVLQASRAPTAAGAFHEATLTIDLRTPVVSYEVPMSNEIRSLDFLRGTVLLPWVHRLITRTVAQTPGASEALVQEVRDAVVNGELLVSDGVVSYQGERGLAMPLVFSSPKVGQGAESQELKTAECEGDEEMRVCNRMRAEEPENEVHKPLRDGYVFPTAGAKGAPALIGRQSTAHDAATGAARDGQLYLVRALPAGLSLQATVTVSTRLYQRIGEQLEALAGTGHRARLGARRLSGTFGETECTLSAFAPSPAPQVVDAEDTTIWFTSDVLARSARLGPGGSLTDLLAAFERAGAPIELAEADGTRFNAGVRHRRVDSWSAASHQPRATRMAIQAGSVLKVRTTALERLAALAAVGIGELRAQGFGRFVVGHPLLEKETFTLRSLHGEDLAPTADGAAASEEAQR
>NZ_CP014232.1|WP_060956746.1|631501_633244_-|CRISPR-associated-protein
MRVTRYELTVHLVTDAPLHSGGVDEVVDRSRDPEDRTTVARRFARDGRGRPVLTGRSVKGALRAACQRFREEHGGAVGPTERELRQLWGDDGTRGAGSAAPLRASAITVHTVELPTEGYEGDEEHKVMLPTRMGNAIDRYWGSAGDTALFEHEYLPRGKELALTITAEAGLPDGVEVPQGDVAPPGPEQVEKLFAFIIGLIKDGRVAFGGRQNAGWGRVALSDSEKAWRLTKAEPGSWAGLEEWLSGAGGRSVDVAPVDCGGSGRMRIEITWDSPTGILVAEPQDDGSGEGADAGAADGAPGEAEGVDSEETKPARPLRAGPEETDPIVLPGSSVRGALRTRATRIARTILLAKKDPSTVADWSGAGVHEQLAQDPSLVRDLFGSTTHRGALTVLDTLAAEDGPSRKVTHNAGDRWTGGVADGLLYSEEVYDSTWNSIVLELDLDRLLTNARAGLGEPGGQEDSQGEDRSRAAFCLLGLVLAEMAAGTLPLGSRGTRGMGQVEVKAMAVTGGKGLGIENWSLKAEDGTGESLPRRILKGLRGVNSGIERNPRAGAGWEGWSSYLVGSSERPLEDKEERDA
>NZ_CP014232.1|WP_060956745.1|630939_631509_-|hypothetical-protein
MPEKTWEPEPLRQAVWKDVPGAGAEQPRGVELQRVLERAEDLGGEMNGVAYTTSGAYSVRRAGASGLTTLIERDGQAGSREEEIDLDTVFELRLWRVMDKETDDGGNVAGEDGVLAHELRWLNGSGAAEIVVGASREGLPGGSDCWVRDNSYLQHGEKGEVMDSIEVFTVEETYGNTVFTDELMTGRWG
>NZ_CP014232.1|WP_081093032.1|628505_630860_-|hypothetical-protein
MVWHHAYNGIPAIRETEKNGAPLPEIYRDGILPASGHDHLSAERLSGKIEVSIRVATPTVPGFRTSDNRVVVASRSGDPEGARTWEDTTIPSTTLKGVLSSAFEAVTASRMRVFRGHDHLVTHRRTPEESTVLYPVLLVPKEGGSGFKVRVMLGKNLRPRNPEGWGKVKSVCAAVLPDNVESGVDFLESDGKWIYSGAKNENKREGDPVRAVGRINELRAAAPHRSVVEFTAEEERFYDVKRYIVSKVGGKYFSGVRDGRGKPVRGAYRGVVVRLTPPGGNRLIDTKCNEFIFFDSESNRTCLEVDDGVIDGLVEVIYSYVDNVRKLADRERRRKAAGLPLNDSGTRTSDAPNTIIVHDIINSKAEGLGFKADRESIRKYIKDQANLGQGLPLFASIDRGEVTALSISQVGRRTSARAVSPTELAADSNVSPALTYEEASAADRVWGFVADGKDVSRDQGAAFKGRISISSAVPDTASDDRRQWLQLPAQGSCGWVLPTLASPKPSAGAPYLRRPNGSVLDEKCTRNDAFQDEQVLIRKTYPTHRFLVNGLSRGHLPLADSVSSPPGPSETVVGSYLTPGAQFSTSISFENLTREELAVLVWLLNPGNLISKKEKNTKKKKFKTLGWKQVGYHHLGFGKPLGLGSVEIRAENIEVYEGRHFGQMYEDLSGCLGCAGAADIKPILRQSSMSDISNWLPPGFSQSLAVRAFVRSAYGWDDSDNNGNYPATGDPVSYPGASRPVGDDELSPIITWFQERERNRVKVSSGEVSRVDHAYDLPAIADPS
>NZ_CP014232.1|WP_081093030.1|627334_628201_+|hypothetical-protein
MRSHRADLVMSPCSSAYRTGIGTDDAVDHLARLRDTGYRYVLRTDIEDYFPNLSIEDALAALSPIAGCPRTIDLIRLIARPRRARGERRTRNRGIAQGSCLSPILANLALTGVDRAMGDTGYGYARFADDIVICSPHEPDLLEALELLDSLLTPRRLRLNREKTAMTSFDEGFRYLGTDFSRSFPPVDPATTSRASRPGPGGLHRPRRRPRPRQPENRLIVDGADGLPQVSIPRRAVSRIVLTGAVGLSSGTRSGRRTTTSTSSSFPATAATWASSPAPARRPAPADS
>NZ_CP014232.1|WP_060956743.1|623743_624553_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPATVFVRFDAPGPVEATPRRLHAAWGRVLDLPEGVSPERAARLPALAHRPPHDQPGPKPYCLGDMTQTPDGLGVELRFLDDRLLETLDAWLAWGGVLPIGDGGQATTMLAAIEAQVLEHADWEDLAAQTASTAWDIHLLTPTVFTSRGHHVPEVTAASLATSLHARWRHWCRPLAPELPERERLTSVLITQDRTRRTVVGLGMPRADRRGRLSSRRIPASVGALRISAPAAGSITAVFSQLMALARYTSVGSHSAYGMGVIDVVADVP
>NZ_CP014232.1|WP_060956742.1|621470_623546_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MKDSGREPGRKDSGKPGKAGKNDRNKRDRKLRDTLGNPFLWLVPFLLVVILGWAVFSSMFGYRTIDTSDGLTLLRDKPDTIKSITVVDGNQRVELDLTTTYVQPKKKGIESRPVGKKVEFSYTDAQAEQVDRLVQAAAPKEGFNSVVPTTSWWSSLVQLLVPALLLGGIMWWLIGRMGGGRGGAMGFGRSKAKVGSKEMPDVTFADVAGEDEAVEELEEIREFLSEPEKFRAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSMAASEFVEMFVGVGASRVRDLFDQAKENAPAIIFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFDANTNVILIAATNRPDVLDPALLRPGRFDRQVSVEAPDMAGRAAILKVHAKGKPLNDDVDLDLVAKRTPGFTGADLANVLNEAALLTARSNAHLIDNRALDEAIDRVIAGPQKRTRVMRDHEKRVTAYHEAGHALCAAAGAYSDPVTKVTILPRGRALGYTQVMPQDDKYSTTRNELLDQLVYAMGGRAAEEIIFRDPTTGASNDIEKATATARKMVTDYGMTSAVGAVKLGTTESETVLGLNATSRDFSEQVAATVDTEVRSLLDAAHREAWEILTRNRAVLDKLAEELLSRETLLEKDLERIFEGVIKQPERPLWRSDESLPVVEPAPASDEAGGEPDDSHGSDDYWGYNH
>NZ_CP014232.1|WP_081093035.1|644116_645436_-|hypothetical-protein
MKKAVRRRAPRLVGLAGAVVLSSSLSIPMMAPVSAEPTSGDTFNTVAEMAQASGASGTLTTLGDEAPGDDGGLTYDVQSASPEGALGAVSVLLADGQWAVPQGLPAGPAAGADGAAANDVVARTQSFVNAGGSLVSDASRPTPLSGANVHAGGPAPYAITSSALVGMVLSGWDYSHTTYAADQNTQVGYRADVGQDLSGSWKPDDLAGWFHSQGRLWLNTDGSINPGDIVFFSNPLSGGPGDSGSAPAQSTVFANVYDVGIYVGNNQVVRASTGTAQAQTLDAQTMAEVALVARPQWSAPAGGAPAPADQQQRAGAGGGAGAGSTATPAPEASASASAQAKAQQGPAAGAPSSKGGSVPDGSSAGSQSSSGAGSSDHNEVVVGAGSSQDSKGRTSAAERPSAQSVRERWLPVTGVAIGVLSVAAILLSAGLIVLRLRRA
>NZ_CP014232.1|WP_003789094.1|645657_646212_-|hypoxanthine-phosphoribosyltransferase
MDATDMGSDLQQVLITEEQIGQRLDEMAAQIDADYAGRDPLLVGVLKGAVYVMADLSRRLHMSAPMDWMAVSSYGSGTKSSGVVRILKDLDTDVTDRHILIVEDVIDSGLTLSWLVGNLSSRGAASVEIATLLRKPDAAKVEVDVKYVGFDIPTEFVVGYGLDYAERYRNLPFIGTLRPEVYGG
>NZ_CP014232.1|WP_060956750.1|646325_647564_-|hydrolase
MTTQGTAAGLVDWRTVERLTALIPAGPSASRSARASSVAVLRRSAQEAPAWVARITGLNRAAQQVAETTRVSVVDRAGLVRASSRALRGLMEQVPAPPASEAIQLVGAAEVAGAMSLLATRLLGQVVPAAPSGTSGHGGGSAGPAHPSGEGDGEGDDVVTPATESARDVTTGGGWDGAASPHLLLVAPNVLAVRRQMDLDMLDLPAWVCLHEMTHAVQLAAAPWLGPYLSDSMRMVIGAVVEAAYGSADGARSAGGGSRQERGSRPRRGRAVRLAARAGRGRVLEGLMNVTDRAEVASLAAALTFLEGHAEVVLDDVHPNRMPSVHRLRAVLSRSRAADGGIGPGPGLGSLLLHRLMGLEAKEAQYADGAAFVRSVVTRIGHEGLNAVWADPELLPTPAELARPDVWVRRVS
>NZ_CP014232.1|WP_060956751.1|647645_649037_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MRKVQTAALTAASLLVFGGYYSLGDALDLLPGPVTVAYADVAPRPFPTPAAPSAKTAAPSGLDQGAPTPSKNALNGYIQGVVSDAALTGGNVTASVVDVATGEELLDRSAASGVTPASTNKLLTAWAALSSMGPGHTLQTKAVLEGQTLTLVGGGDVLLAENEGDPNATAGHAGLGDLARATAEKLKSQGTTSVSLRLDDTLFTGPQWNDKWEAGNEQYVAKIQPIMVDVSATQNQGYPDDPAMGAAQAFAKHLSEAGITVDGEPTRAAASGGAREVASVSSAPLSDILALSLKTSDNTMTEVEGRLVAAHAKETTDFSGASKAVLAQLSKDGFDTSGVTLLDSSGLAKGNKVPARLLTQILTKAAGGEGGSAGRTLIADLPVAALDGTLGNRLHDTSAAGTVRAKTGSLEQTASLAGVVTTADGRQLAFAVMANGFPANGGGAAAAAIDNHFVAPLASCGCS
>NZ_CP014232.1|WP_060956752.1|649272_649773_+|inorganic-diphosphatase
MEFDVTIEIPKGNRNKYEIDHETGRIRLDRMLFTSTRYPDDYGYIDGTLGEDGDPLDALVLLEEPTFPGCVIRCRALGMFRMRDEKGGDDKVLCVPSADQRASWRTDIEDVSEFHRLEIQHFFEVYKDLEPGKSVEGAHWVGREEAEEEIRQSFQREADRVAHEGH
>NZ_CP014232.1|WP_060956753.1|649831_651223_-|C40-family-peptidase
MSPIPPRRHGHGVVATAVVALACTLAPSVLADPVDQSDIDRSKASERSTSTSIASLEAQLAQESSNLEDAQIKAQVANEDYLTAVDELNTATKDAQTAQTNADAAASSTAAARSDLGSIVVQTYQESGNPLDPLTPYLTSESLADLADADVALTRAGEKNNAKVQNVEALEAVATSMQTIADQKVTAKEAAKTSAATAKSDAEAAANDAQNAVTTTRTNRQNLIVQLAAQRNTTVELETKYQNQVEAERKAREEAAAQAAAKAASEKAAADLAQKQAEQAAAQPQESAPAPQEQSSQPSPSPQSSAQEPATTSQPEPEAAEEEEAAPAPAPAPEPAPAPSHSGSAASTAINAAMGYLGTPYVWAGESAAGLDCSGLTMVSYAAAGVELTHSSRVQYGEGSLVPLDAAQPGDLVFWSSDGSQSGIYHVAIYLGDDTMIEAPTFGMTVRVTSMRYSGVMPYAVRL
>NZ_CP014232.1|WP_060956755.1|652049_653471_+|O-acetylhomoserine-aminocarboxypropyltransferase
MTDQHPTAPEAALQSTQPAPSPTSPAGWRFETKQVQAGHDPMSEPAHARAIPIYQTSSYVFESAEQAAARFALTDLGPIYTRLTNPTNDIVEQRIAALEGGVGALLTSSGQAATTLALVTLGGAGDNIVASPSLYGGTTNLLTHTLPRLGIEARFVDEPGDPAAWAALADERTVAFFGESIPNPRGDILDIEAIAAAAHELGIPLVVDNTVASPFLTRPFEWGADIVVASATKFLGGHGSSVAGVIVDSGSFDFAAQPERFPGFNTPDESYHGLVYARDLGVGSPLGANLAFILKARAEGQRDLGFTLAPHSAFLIAQGIETLSLRMERHVDNALAVATWLEGRDDVASVRYSGLASSPYYERHRKYCPRGAGSILTFDLAGGREAGAAFIDALSLFSNLANIGDVRSLAIHPATTTHSQLDDAGLAAAGISAGTVRLSVGIEHIDDILADLERGLAAARAVGAGEPSAAAGA
>NZ_CP014232.1|WP_060956756.1|653482_654703_+|homoserine-O-acetyltransferase
MSATTSSSYPVSSGSTETEPAAFGVGTASSKLVDRKAGSPTGAWRPGDEPGHRRFLEIGDLPLESGEVLPNTVLAFETWGELSPQRDNAVLVLHALTGDSHVTGEAGPGHPTPGWWSDLVGPGRAIDTERYFVVAANILGGCQGSTGPSSTAPDGRPWGSRFPWLTTRDAVEAEARLADALGIEVFHLVIGASLGGHRAIEWGVTHPQRVRNLALVATGASTTADQLAWCHLQELAIVADPFFFDGDYYSHSVGPVRGLGLARALAHTTYRSAAELDERFGRRHQGEEDPAVGGRYQVESYLDYHAGKLLARFDANTYLIVTHSMMVHDVGTGRGGIEAALARVQARTLVVDVDSDRLFLPAQAEELAGGIPGARRETISSLHGHDGFLIEAEQMDAILRDFLAGA
>NZ_CP014232.1|WP_060956757.1|654966_657672_+|sialidase
MTSHSPFSRRRLPALLGSLPLAATGLIAAAPPAHAVPTSDGLADVTITQVNAPADGLYSVGDVMTFNITLTNTSGEAHSYAPASTNLSGNVSKCRWRNVPAGTTKTDCTGLATHTVTAEDLKAGGFTPQIAYEVKAVEYAGKALSTPETIKGATSPVKANSLRVESITPSSSQENYKLGDTVSYTVRVRSVSDKTINVAATESSFDDLGRQCHWGGLKPGKGAVYNCKPLTHTITQADVDAGRWTPSITLTATGTDGATLQTLTATGNPINVVGDHPQATPAPAPDASTELPASMSQAQHLAANTATDNYRIPAITTAPNGDLLISYDERPKDNGNGGSDAPNPNHIVQRRSTDGGKTWSAPTYIHQGTETGKKVGYSDPSYVVDHQTGTIFNFHVKSYDQGWGGSRGGTDPENRGIIQAEVSTSTDNGWTWTHRTITADITKDKPWTARFAASGQGIQIQHGPHAGRLVQQYTIRTAGGAVQAVSVYSDDHGKTWQAGTPIGTGMDENKVVELSDGSLMLNSRASDGSGFRKVAHSTDGGQTWSEPVSDKNLPDSVDNAQIIRAFPNAAPDDPRAKVLLLSHSPNPRPWSRDRGTISMSCDDGASWTTSKVFHEPFVGYTTIAVQSDGSIGLLSEDAHNGADYGGIWYRNFTMNWLGEQCGQKPAEPSPAPSPTAAPSAAPTEKPAPSAAPSAEPTQAPAPSSAPEPSAAPEPSSAPAPEPTTAPSTEPTPAPAPSSAPEQTDGPTAAPAPETSSAPAAEPTQAPTVAPSVEPTQAPGAQPSSAPKPGATGRAPSVVNPKATGAATEPGTPSSSASPAPSRNAAPTPKPGMEPDEIDRPSDGTMAQPTGGASAPSAAPTQAAKAGSRLSRTGTNALLILGLAGVAVVGGYLLLRARRSKN
>NZ_CP014232.1|WP_081093036.1|657967_658090_-|hypothetical-protein
MPADEYASWQETAHLFRSLKNARRLLDAYEQALTDSGPRT

Crispr_ID: NZ_CP014232_5

• CRISPR_ID: NZ_CP014232_5
• CRISPR_location: 791206-791302
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP014232_5

Consensus_repeat	Method
GGAGAGGCGGCCGGGGCGGGAGAAG	CRISPRCasFinder

spacers of NZ_CP014232_5

>5.1|791231|47|NZ_CP014232|CRISPRCasFinder
CGGCCGGGGCGGGAGAAGCGGCCTCGGCAGGAGCCTCAGCCTCGTCA

CRISPR arrays and Neighbor proteins around NZ_CP014232_5

CRISPR arrays

The CRISPR arrays of NZ_CP014232_5

>merge|NZ_CP014232|5|791206-791302|CRISPRCasFinder
GAACTGTCGGGCTCGGCGGGAGAGGCGGCCGGGGCGGGAGAAGCGGCCTCGGCAGGAGCCTCAGCCTCGTCAGGAGAGGCGGCCGGAGCGGGAGAAG

>NZ_CP014232|5|5|791206-791302|CRISPRCasFinder
GAACTGTCGGGCTCGGCGGGAGAGG	CGGCCGGGGCGGGAGAAGCGGCCTCGGCAGGAGCCTCAGCCTCGTCA
GGAGAGGCGGCCGGAGCGGGAGAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060956858.1|803487_804309_+|alpha/beta-hydrolase	unknown	unknown	unknown
NZ_CP014232.1|WP_060956844.1|783140_784244_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|379234
NZ_CP014232.1|WP_081093043.1|802279_803200_+|copper-homeostasis-protein-CutC	unknown	unknown	gnl|CDD|225684
NZ_CP014232.1|WP_060956848.1|786898_788233_-|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|223786
NZ_CP014232.1|WP_060956852.1|791737_792604_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|223704
NZ_CP014232.1|WP_060956842.1|781615_782113_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239517
NZ_CP014232.1|WP_060956853.1|793017_794325_+|hypothetical-protein	unknown	unknown	gnl|CDD|223039
NZ_CP014232.1|WP_060956854.1|797935_799192_+|DUF2183-domain-containing-protein	unknown	unknown	gnl|CDD|227187
NZ_CP014232.1|WP_060956857.1|801307_802222_+|cation-transporter	unknown	unknown	gnl|CDD|223131
NZ_CP014232.1|WP_060956841.1|780773_781466_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP014232.1|WP_060956856.1|799904_800222_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060956855.1|799433_799745_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060958124.1|795843_797091_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|172015
NZ_CP014232.1|WP_060958125.1|800300_801080_-|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl|CDD|225415
NZ_CP014232.1|WP_081093042.1|788446_789406_-|DUF2993-domain-containing-protein	unknown	unknown	gnl|CDD|378597
NZ_CP014232.1|WP_060956843.1|782109_783144_-|hypothetical-protein	unknown	unknown	gnl|CDD|223039
NZ_CP014232.1|WP_060956845.1|784240_785353_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238744
NZ_CP014232.1|WP_060956850.1|789407_790241_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060956847.1|785873_786875_-|DUF58-domain-containing-protein	unknown	unknown	gnl|CDD|224635
NZ_CP014232.1|WP_060956846.1|785346_785868_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060956844.1|783140_784244_-|VWA-domain-containing-protein	gnl|CDD|379234	pfam13519, VWA_2, von Willebrand factor type A domain.	8.375e-09
NZ_CP014232.1|WP_081093043.1|802279_803200_+|copper-homeostasis-protein-CutC	gnl|CDD|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	7.67813e-48
NZ_CP014232.1|WP_060956852.1|791737_792604_-|serine/threonine-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	8.16157e-49
NZ_CP014232.1|WP_060956842.1|781615_782113_-|NUDIX-domain-containing-protein	gnl|CDD|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	1.93928e-26
NZ_CP014232.1|WP_060956853.1|793017_794325_+|hypothetical-protein	gnl|CDD|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	1.14174e-05
NZ_CP014232.1|WP_060956854.1|797935_799192_+|DUF2183-domain-containing-protein	gnl|CDD|227187	COG4850, COG4850, Uncharacterized conserved protein [Function unknown].	1.09238e-57
NZ_CP014232.1|WP_060956857.1|801307_802222_+|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.36243e-77
NZ_CP014232.1|WP_060956841.1|780773_781466_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.52596e-13
NZ_CP014232.1|WP_060958124.1|795843_797091_+|DUF2029-domain-containing-protein	gnl|CDD|172015	PRK13375, pimE, mannosyltransferase; Provisional.	2.48579e-34
NZ_CP014232.1|WP_060958125.1|800300_801080_-|trimeric-intracellular-cation-channel-family-protein	gnl|CDD|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	1.87851e-49
NZ_CP014232.1|WP_081093042.1|788446_789406_-|DUF2993-domain-containing-protein	gnl|CDD|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	5.30458e-07
NZ_CP014232.1|WP_060956843.1|782109_783144_-|hypothetical-protein	gnl|CDD|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	2.0221e-06
NZ_CP014232.1|WP_060956845.1|784240_785353_-|VWA-domain-containing-protein	gnl|CDD|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	5.40187e-15
NZ_CP014232.1|WP_060956848.1|786898_788233_-|AAA-domain-containing-protein	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	6.8752e-82
NZ_CP014232.1|WP_060956847.1|785873_786875_-|DUF58-domain-containing-protein	gnl|CDD|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.06136e-19

Protein sequences

>NZ_CP014232.1|WP_060956850.1|789407_790241_-|hypothetical-protein
MSDLTWTEMPEVSPEQPDELVLDFSGEIYRVAPADTFVIGRGGDLDIDDNPYLHRRFLVFAHSENLWWIANEGSRLSATLTDGEGLVQSRLAPGARMPLVFPRVILTFSAGPTTYEINLITSGEDRFSGIDGVRQSSGQTTIGVTPMTRSQLLLVLALSEPVLKRAGTGAAEIPSSAAAAARLGWPLTKFNRKLDNVCEKLDRVGVRGLRGGRVAGAASNRRTALVEHAVSTLMVTAEDLYMLDEELAANQAPADQTAERSVSTAPVAQSSPSASGR
>NZ_CP014232.1|WP_081093042.1|788446_789406_-|DUF2993-domain-containing-protein
MTRAVRSHRGDADSPPAKADVAGKEFPNRALLDEVLANDPEEGDFLEDRLVEDSSQGKLSDGNRPRPARRRHARRWLAVLVVLVVILSAGAVGAEYLVRGQVDAAVRSALPGLNPDARIATKGILLRQVIGGSLDSLSVDSSSLTITSKSQGNASVTLSDVDVDLSHISLHKPYQTDTVAASGTISWQQVGELAAVSHPKLKGVTLQAKRTGTSAQDPGSIQASVSLLGLSGEAEITPSLGSDGSLILTITSTRMGGNDLGVDVATGQDSMLSYIGLDSPQITVPAKSLPPGLRPTSVIVTSDGLRLSLAGSRVNLGQL
>NZ_CP014232.1|WP_060956848.1|786898_788233_-|AAA-domain-containing-protein
MSMQPEHRAQPGSQPGGWGSGQQYGQPSGQPVAQQAGQPTGSSAGQGTAASAQQPPSVPPQVDPQAAGAPSAPTASSRMTVPGYPSGPAAPAEEKVDTGPLPSREALRREAKAASSRRGAGDADVERAAELLTSVANIFSQRVVGQEQLRTALVTALMSSGHILLESVPGLAKTTAAQTLASAVSGSFRRIQCTPDLMPNDIVGTQILNSSTGEMTTQLGPVHANIVLLDEINRSSAKTQSAMLEAMQERQTSIGGVVYPLPHPFMVLATQNPIEEEGTYVLPEAQMDRFLMKEVLTYPRPSEEADVLDRISNGTFDQPVTGRPISTGDVEWLQRAAERVYVDPVIKQYIVALINTSRGGGPRPVPGLDRQVRVGASPRGGIALMKVAQAVALQEGRTYVIPDDVRLLRHGVLRHRLVLTYDALADGVAPEAIIDAIFAAVPTP
>NZ_CP014232.1|WP_060956847.1|785873_786875_-|DUF58-domain-containing-protein
MSTEVHGAPGAPESDSGEGRRGSRIERLRAALSLPTLRRATGLLDGRHKSVFVGRGQDFDDMSFYRPGDDISDIDWKSSARLGQPVIKRYQRESMMPMVLAVDTGRTMAAMTPSGEDKRDLALGVAEVFAYLARMRGDSVALVAGDAGRMTSRPARSGAKHVETLLALLARTFEDLDAPVEGAPGVYELAPGAPPSSLPRLMERVSTWHRRRSLVILITDTAHPGPDAATWLRRLSIQHEMIVVQIEDDDPLRPDGGRGRDIDLPFEIPAFLRADSYLAAQAAVVREQWRTSVEQVLDARHLEYGVVSSEETLIDSIAELLQRERAAVARGRR
>NZ_CP014232.1|WP_060956846.1|785346_785868_-|hypothetical-protein
MQIMPPVLMPIWMVIVMIVGLLLVTAWLLRTFLVTRRDISQEVGDIPMAPRERRQWGERLAEISQRWDAGDLDLRELHLELAALLRGFAEARSGEEITTATVSEILDMAATAGPSSVEERRRSVRAAGRPLDINPLGHVGELLAVWEQPSFDREPQAAAQEALTHAREVVTRW
>NZ_CP014232.1|WP_060956845.1|784240_785353_-|VWA-domain-containing-protein
MVMLWLFIVLLVIAAAAIIAVFIIDRRSGLGSSSKAPKRSRMPWSRTGEDQAVELPRRLANSASLFQLPAVRKRIRAQRWLHALLAVMLVSGLVSAAAIAGRPVRVIERSDALANRDIVLCLDVSTSMVRIDSSVLTTFSEILEDFDGERVGIVAWNSAAQTIVPLTDDYELLRDQLTELGDVLDIDPENVTYKQQLAYQEAFGGTVNTSINGSSLAGDGLASCAQAFDNQGLERSRSIILATDNQVIDPDNEQIYPLPDAAKLLAERKIRLFSIYGADEDQPYQNLLDKTPEESREELKTVTEEQGKGRFYDVEDSGTGGQIVKELEKTEVSALGGRKQTRRTDVPQRLVITLSLVLLGYLGLTTWRRA
>NZ_CP014232.1|WP_060956844.1|783140_784244_-|VWA-domain-containing-protein
MKPVPIIGDFAFIPVTWWLLVLLLAAALTGLLVVARRRLVRDDAEPAARRAWWRRLAIVVVIVLALAGPAIRGSEAISVSNVEIYMVVDRTGSMAAEDYQGKGPDGVDQSASTRLDGVRADMRAIREAFPDSRFSIIALDNTAARELPLTHDTNAVDAWIGSFKQEVSGHATGSSLEVALPMLGLTLAQARQSDPKDIRLVYIFSDGEATDNGRGAQAADNAGISWQSLAGLIDGGAVLGYGSTEGGKMRSYDGSPSTGEHTQSDYITDGQGGQPGVSKIDADELQKVAKDLGLPYFHRTGGSGDDPTSKFTNLDIEAVTSDGRAKTNARVYLTWPLGLIAFGLLLWEILDLMRADRRLRLLMGRGR
>NZ_CP014232.1|WP_060956843.1|782109_783144_-|hypothetical-protein
MMTIGHTPGEFPGQGSSGTQPGAADRAQNAPGAPGAAGAPSEQEVDYLQNADPKDDASSPAPEDPRRREARLKRRRRLLAIGGVPAALVTIISLWLGSIFLISLAGNRAAAAGHYDTALSRYRIVAAINPWLEQWRVHFNLGTGQLAAKDPTSAVTTLNQALSEAPKAKVDPETKVKEAGSPECMVRTNLYVAHLTLAAQAQESGSSTAVTEHIEAAKKAADTCEVPPPPEQNPSPSPNPSATPSSDPSSSASSQPSSDPSSSASSQPSSDPSSSPSSQPSSDPSSGPSSSSSSSPGETSSSTPSAKPTPTPVDDRAKRLRDRNNGSPGTSEESGGGEGGGKPW
>NZ_CP014232.1|WP_060956842.1|781615_782113_-|NUDIX-domain-containing-protein
MSDSDTGRASRLVVAAAVLDDLAHPTTLLCAARSYPPEHAGQFELPGGKVEPAERPEQALARELDEEIGLSAHLGPELVVPRQLAVPPPPDSAPGDDAPAWPAMHGFRMRVWLAEPARPGDRGRVGGDHQRLEWVRLDPTDQLRRLPWLEADLPIIDALVGALGR
>NZ_CP014232.1|WP_060956841.1|780773_781466_-|TetR/AcrR-family-transcriptional-regulator
MPKILGSSLAEHRERTRTALFGALSELMSQRSFDKITLSDVANHAGVGRTAVYNHFADKEDLLLAFMEHEAGRYAEELSRALAGTQDPIDRLRIYVRQQALIARHFHFPASGPLSEVVSRGTAGRLKAHGALVAQMLASILTDAMDQGLIPAQEPEQVIPLIHATVMGGRPTPTDPEQRRAYLESLDAFVLRAVGARQPAHAVPTIAQPRATEPLEGAQAPGSLRHSAVG
>NZ_CP014232.1|WP_060956852.1|791737_792604_-|serine/threonine-protein-phosphatase
MTEHVRADADAIVIRGEGGIRASEVVVGAATDVGRLRTINEDGYLAIAPAFVVVDGMGGHAAGRMATQVALDSLYSLAGATVTDVDTVVRAVVVAQEAIMAIPSHAAYLPGATIAGVILAWVADEQGVTRPTWVIFNIGDARVYLLRDNMLSQVTRDHSRVQILIETGELTPEQARRDPRRNIVTRALGGGIADSGVPDLYTVPVAAGDRFLICSDGLSDELDDEAIATVLAAGCTAQRTAELLVAASLEGGGHDNTTAVVVDSLQVPTPPSGARAFHPGDASSQGAQ
>NZ_CP014232.1|WP_060956853.1|793017_794325_+|hypothetical-protein
MSQAKDELVARAQDPNAELETLHQLAQNYPGLRPYIAANPRTYPALLEWLGTLGDPAVDAALASRDSQPQSAPSAQSSPRLAVVSPPGAQPGTPSARSSEAPTQVTLPRSLQPGSAVSGASAVSGASAISAASSRSAQSAPSAFNTAGANTQVDGFQAAGAPAVSVPTSHPAPAMASQSPARPVQPALQQTFQQSANVSQAQSPVIPTPVQQAPAVTGDDGVFGVGTEDDDSEPPSSFLTSNRILLILALLVATVLVFLATWYLSGGSDKGSAADSGTEAPADSGQAAAEDGASPAPQSASPKASATPSASATPTLKAPAPQEAQELSGFDAPSGNISCTLNDNTLTCVINEHAKVDSCDSSKPLTVTIDADGNMSKSCGSPFTTKGVSLSYGSSAKHSTFACKSTDKGMQCWSQVTGKGFILSRDSVVDTHGGN
>NZ_CP014232.1|WP_060958124.1|795843_797091_+|DUF2029-domain-containing-protein
MVAAARAVASAPVATILGWLALLVPAYWSMVDEHGQWLFKLDSFVYYEAVRQWLDGGDLYSWYANPGQHLWPFTYTPLAAWVIAPLTWMSYQSATVLLIAATPLCAAVTAYAVLRRLAVAPRMARTLAPWLALIGVIALEPFPKTMEYAQVNAILMALVAVDLFLVPERSRWRGALSGLAAAIKLTPAVAILVLLARREWRAAATMAGSAVGLTLLAALAAPAESWEFFTSAMWDPGRAGFADYSGNQNLKGAIARGLPESTWNLTWATCSLLAVVAAWFLCRRLDRLRGAGGAAGGPGQDDGLILSLQISVVMVLGLLISPISWSHHWVWCLPVLMSVAAATWRWRSTALGVAGAAGFLVFVLAMQWWFPEQNHVEQNWPAWAKAVGSSYTWWALGCGAVLWWVSGRRLKALHR
>NZ_CP014232.1|WP_060956854.1|797935_799192_+|DUF2183-domain-containing-protein
MPLSDIPRAVEDRFHRDTVPVLKRQGWRPRVIPYDGYGTSAPAQPGPTAQPQDTAAQRRTAGARRPSSGSRRASSDSSQPATSTRPAPMARVLARMVMRPQDAPAEGPLFRSLPDTLPISAAQARSFAMTGLLDAQRGWRLFIEVPVAFLPVTVHVGRASVRTRADRCGYIDVVVRDHGLEPGWHEARIEAMGAHAVTAKVLIIPDGPRLGIISDIDDTAMVTHVPRVLVAAWNQLVKYSSAREPVPGMAELYSRIQAAHPGTPMMYLSTGAWNVVPTLRSFFSRHGFPSGPALMTDWGPTNTGWFRSGIEHKRTELRRLMIDLPQITWILFGDDGQHDPHIYGEAARHHADRIAAVAIRRLTATQQVLAGGLTAHPMGIGPEARTLAEADVPVVVGADGYELARLLPRELLEAAPRR
>NZ_CP014232.1|WP_060956855.1|799433_799745_+|hypothetical-protein
MSPFSTDSTGPAEPTGPTSSAASTAASLRRHAILADLNVLQVATLMGTGLLVTLGVILGGRSYITTVTPDGLIASQPSAHGTSVQDPAAGSIPSTGDSSEKTV
>NZ_CP014232.1|WP_060956856.1|799904_800222_+|hypothetical-protein
MAGKIPFILGLGAGYVLGTRAGRAQYERIKTAASKVAEQPFVRTRVDAASSHVKQAVRTQGEAVTEKVADAVKERLFGAPSNKGGAQSQPVDAGQASVRPVGESS
>NZ_CP014232.1|WP_060958125.1|800300_801080_-|trimeric-intracellular-cation-channel-family-protein
MPASLTDTFRLLDLCGVLLNGILGGLIARRKNFDLVGFVVLAMLTATAGGILRDVMIQAGPPFALTDPYYLYTACVGATVAWFVPLTSRPTRRLLVVADAVILGCWAATGASKALTHGLGVMPALLLGCLTAIGGSMIRDVAVGETPAVFGGNKLYAIPALIAAGTQVVAVKAGVADAHAMLVSTVVGAGLCVLAYWRSWQLPVISDRERRRAGRREVNGALVGWRRGLMMGPLKAPSWRGRGGRTAQEDASCQQPEQG
>NZ_CP014232.1|WP_060956857.1|801307_802222_+|cation-transporter
MSSRYSPPKDLSRYAWLSIGAALATIALKGASAWLTGSVGLLSDAAESVVNLIAAVVALIVLKISAKPADADHQFGHSKAEYFSAVVEGVMIFVAAAVIIISAVGRLIDPQMPEQLGVGLAVSVIASLLNGAVAWVLYRAGRRERSMTLVADAKHLATDVVTSAAVLVGVALVAVFGSAVLDAVVALGAGLNIMWTGFTLIRDSVGGLMDIAPSAEVLQRVEEVLAHHRQTGMIDFHAVRVREAGNRRFMELHVLVPAAWSVKKGHDFTEQVIDELIEADTSLRISAHLEPIEDPKSYEDVEDI
>NZ_CP014232.1|WP_081093043.1|802279_803200_+|copper-homeostasis-protein-CutC
MNAMRLTGSAPSLRQHTITAPVPSWRHPDHVVLETCVEDVEGVRISARAGADRAELGANLTATGTTPSIGTIEAAIFAAAEQVEQRRAQAGAHWADKPEAAAPFGLRILIRPRGGSFVYDADEGRAMIADVRRIATLALEMAEFTRPQATGGGRTTLPPAVDLGFVVGALTEDGTIDRGLVRLLVDMANGAPVTFHRAFDQCRDTVEAYGDLEGLGVRYVLTSGAAQTAADGASVIAGLVASGGPTVVAAGAVRPDGLVDLVESTGVREVHMRCPREGLTPDEPQRTDEALVRRAVETVRAVPRPE
>NZ_CP014232.1|WP_060956858.1|803487_804309_+|alpha/beta-hydrolase
MNDVRIDTPRGITLAGTLQLPAGAAPIDLEVSTTSEDTQPPQARPEGVVLLAHDFLTDRHGQGGRLDWIGARYREAGLATLNLDFSGLGESDDDVITLASEAEDLRAASSWLAGLGFTRQMIHANGFGATAALLARPEHVRTAVLVGAIVGPQSILWEEIFSPEQLDELAQHGLTRLVDDNPNSREWNVLSKETLADFSMQDPQRTLAELPWPVLMVHGVLSNELPDTAEATAEGFPLLPDSSQMVHVHAETLDQAQEEVARLSLEWAQRRLR

Crispr_ID: NZ_CP014232_6

• CRISPR_ID: NZ_CP014232_6
• CRISPR_location: 1225367-1225882
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 8 spacers
• Cas_protein_info: csb2gr5,cas3

Consensus repeat of NZ_CP014232_6

Consensus_repeat	Method
GTCAGCCCCGCGCANGCGGGGGTA	CRT
AGCCCCGCGCACGCGGGGGTAGAGG	CRISPRCasFinder

spacers of NZ_CP014232_6

>6.1|1225391|37|NZ_CP014232|CRT
GAGGGTGGTACGACCCCTCCCAGCTGGACTCCGACGG
>6.2|1225452|37|NZ_CP014232|CRT
GAGGGTCGAACACCCCCGACGGCTCGGTGGAGCGTAC
>6.3|1225513|37|NZ_CP014232|CRT
GAGGCTGGAAGCACCGCCAAGTCGCGGGGCCCGCGAC
>6.4|1225574|37|NZ_CP014232|CRT
GAGGGCACATCACCGGCAGGGGCAGCATCCCGCTCAG
>6.5|1225635|37|NZ_CP014232|CRT
GAGGGATCAAAGGCCACCAAGGCCATGGTGTCGTCCG
>6.6|1225696|37|NZ_CP014232|CRT
GAGGTAGCGAATCGACGTGCTGAACCAGGTGTCGGCT
>6.7|1225757|37|NZ_CP014232|CRT
AAGGCGTGAAGTCGAAGCCGTGCACCGCGCGGTTCTT
>6.8|1225818|37|NZ_CP014232|CRT
GAGGCGAGCACACCAGCCCGCACCTGGTGGCCGGCTC
>6.9|1225395|36|NZ_CP014232|CRISPRCasFinder
GTGGTACGACCCCTCCCAGCTGGACTCCGACGGGTC
>6.10|1225456|36|NZ_CP014232|CRISPRCasFinder
GTCGAACACCCCCGACGGCTCGGTGGAGCGTACGTT
>6.11|1225517|36|NZ_CP014232|CRISPRCasFinder
CTGGAAGCACCGCCAAGTCGCGGGGCCCGCGACGTC
>6.12|1225578|36|NZ_CP014232|CRISPRCasFinder
GCACATCACCGGCAGGGGCAGCATCCCGCTCAGGTC
>6.13|1225639|36|NZ_CP014232|CRISPRCasFinder
GATCAAAGGCCACCAAGGCCATGGTGTCGTCCGGTC
>6.14|1225700|36|NZ_CP014232|CRISPRCasFinder
TAGCGAATCGACGTGCTGAACCAGGTGTCGGCTGTC
>6.15|1225761|36|NZ_CP014232|CRISPRCasFinder
CGTGAAGTCGAAGCCGTGCACCGCGCGGTTCTTGTC
>6.16|1225822|36|NZ_CP014232|CRISPRCasFinder
CGAGCACACCAGCCCGCACCTGGTGGCCGGCTCGTC

CRISPR arrays and Neighbor proteins around NZ_CP014232_6

CRISPR arrays

The CRISPR arrays of NZ_CP014232_6

>merge|NZ_CP014232|6|1225367-1225882|CRT,CRISPRCasFinder
GTCAGCCCCGCGCATGCGGGGGTAGAGGGTGGTACGACCCCTCCCAGCTGGACTCCGACGGGTCAGCCCCGCGCACGCGGGGGTAGAGGGTCGAACACCCCCGACGGCTCGGTGGAGCGTACGTTAGCCCCGCGCACGCGGGGGTAGAGGCTGGAAGCACCGCCAAGTCGCGGGGCCCGCGACGTCAGCCCCGCGCATGCGGGGGTAGAGGGCACATCACCGGCAGGGGCAGCATCCCGCTCAGGTCAGCCCCGTGCATGCGGGGGTCGAGGGATCAAAGGCCACCAAGGCCATGGTGTCGTCCGGTCAGCCCCGCGCACGTGGGGGTCGAGGTAGCGAATCGACGTGCTGAACCAGGTGTCGGCTGTCAGCCCCGTGCATGCGGGGGTAAAGGCGTGAAGTCGAAGCCGTGCACCGCGCGGTTCTTGTCAGCCCCGCGCACGCGGGGGTAGAGGCGAGCACACCAGCCCGCACCTGGTGGCCGGCTCGTCAGCCCCGCGTACGCGGGGGTATAGG

>NZ_CP014232|6|5|1225367-1225878|CRT
GTCAGCCCCGCGCATGCGGGGGTA	GAGGGTGGTACGACCCCTCCCAGCTGGACTCCGACGG
GTCAGCCCCGCGCACGCGGGGGTA	GAGGGTCGAACACCCCCGACGGCTCGGTGGAGCGTAC
GTTAGCCCCGCGCACGCGGGGGTA	GAGGCTGGAAGCACCGCCAAGTCGCGGGGCCCGCGAC
GTCAGCCCCGCGCATGCGGGGGTA	GAGGGCACATCACCGGCAGGGGCAGCATCCCGCTCAG
GTCAGCCCCGTGCATGCGGGGGTC	GAGGGATCAAAGGCCACCAAGGCCATGGTGTCGTCCG
GTCAGCCCCGCGCACGTGGGGGTC	GAGGTAGCGAATCGACGTGCTGAACCAGGTGTCGGCT
GTCAGCCCCGTGCATGCGGGGGTA	AAGGCGTGAAGTCGAAGCCGTGCACCGCGCGGTTCTT
GTCAGCCCCGCGCACGCGGGGGTA	GAGGCGAGCACACCAGCCCGCACCTGGTGGCCGGCTC
GTCAGCCCCGCGTACGCGGGGGTA

>NZ_CP014232|6|6|1225370-1225882|CRISPRCasFinder
AGCCCCGCGCATGCGGGGGTAGAGG	GTGGTACGACCCCTCCCAGCTGGACTCCGACGGGTC
AGCCCCGCGCACGCGGGGGTAGAGG	GTCGAACACCCCCGACGGCTCGGTGGAGCGTACGTT
AGCCCCGCGCACGCGGGGGTAGAGG	CTGGAAGCACCGCCAAGTCGCGGGGCCCGCGACGTC
AGCCCCGCGCATGCGGGGGTAGAGG	GCACATCACCGGCAGGGGCAGCATCCCGCTCAGGTC
AGCCCCGTGCATGCGGGGGTCGAGG	GATCAAAGGCCACCAAGGCCATGGTGTCGTCCGGTC
AGCCCCGCGCACGTGGGGGTCGAGG	TAGCGAATCGACGTGCTGAACCAGGTGTCGGCTGTC
AGCCCCGTGCATGCGGGGGTAAAGG	CGTGAAGTCGAAGCCGTGCACCGCGCGGTTCTTGTC
AGCCCCGCGCACGCGGGGGTAGAGG	CGAGCACACCAGCCCGCACCTGGTGGCCGGCTCGTC
AGCCCCGCGTACGCGGGGGTATAGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060958164.1|1222827_1224039_+|type-I-U-CRISPR-associated-protein-Cas7	unknown	unknown	gnl|CDD|274207
NZ_CP014232.1|WP_010612931.1|1230391_1231582_+|phosphoglycerate-dehydrogenase	unknown	unknown	gnl|CDD|240651
NZ_CP014232.1|WP_081093079.1|1213861_1215061_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP014232.1|WP_060957098.1|1237038_1238541_-|penicillin-binding-protein-2	unknown	unknown	gnl|CDD|223839
NZ_CP014232.1|WP_060957090.1|1222187_1222763_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	unknown	unknown	gnl|CDD|187858
NZ_CP014232.1|WP_060957085.1|1212363_1213851_+|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl|CDD|131739
NZ_CP014232.1|WP_060957087.1|1216769_1218080_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379306
NZ_CP014232.1|WP_060957094.1|1229245_1230325_+|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl|CDD|235428
NZ_CP014232.1|WP_060957099.1|1238537_1240235_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl|CDD|223843
NZ_CP014232.1|WP_060957089.1|1221347_1222163_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957088.1|1218469_1221259_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_CP014232.1|WP_060957084.1|1211658_1212168_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239645
NZ_CP014232.1|WP_060957100.1|1240236_1241667_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|223704
NZ_CP014232.1|WP_060957091.1|1224031_1225348_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_CP014232.1|WP_060957095.1|1231776_1232994_-|Fic-family-protein	unknown	unknown	gnl|CDD|225718
NZ_CP014232.1|WP_060957086.1|1215217_1216726_+|alpha-galactosidase	unknown	unknown	gnl|CDD|269892
NZ_CP014232.1|WP_060957093.1|1227417_1228974_-|DUF4832-domain-containing-protein	unknown	unknown	gnl|CDD|374373
NZ_CP014232.1|WP_060957092.1|1226362_1227289_-|ADP-ribosylglycohydrolase	unknown	unknown	gnl|CDD|377122
NZ_CP014232.1|WP_060957096.1|1233875_1235918_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP014232.1|WP_060957097.1|1235914_1237042_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP014232.1|WP_060957091.1|1224031_1225348_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	5.1e-33	109.4	0.3
NZ_CP014232.1|WP_060957088.1|1218469_1221259_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	8.4e-83	273.2	1.5

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060958164.1|1222827_1224039_+|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|274207	TIGR02570, CRISPR-associated_protein_Csb1, CRISPR-associated protein GSU0053/csb1, Dpsyc system. Members of this family are found in association with CRISPR repeats and other CRISPR-associated (cas) genes in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria). This CRISPR/Cas type is designated Dpsych.	2.5782e-55
NZ_CP014232.1|WP_010612931.1|1230391_1231582_+|phosphoglycerate-dehydrogenase	gnl|CDD|240651	cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	3.02692e-159
NZ_CP014232.1|WP_081093079.1|1213861_1215061_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.10837e-46
NZ_CP014232.1|WP_060957098.1|1237038_1238541_-|penicillin-binding-protein-2	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.29932e-87
NZ_CP014232.1|WP_060957090.1|1222187_1222763_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	4.18337e-06
NZ_CP014232.1|WP_060957085.1|1212363_1213851_+|CCA-tRNA-nucleotidyltransferase	gnl|CDD|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP014232.1|WP_060957093.1|1227417_1228974_-|DUF4832-domain-containing-protein	gnl|CDD|374373	pfam16116, DUF4832, Domain of unknown function (DUF4832). This family consists of uncharacterized proteins around 200 residues in length and is mainly found in various Bacteroides and Capnocytophaga species. The function of this family is unknown. Distant homology analysis suggests a possible similarity of proteins from this family to TIM barrel glycoside hydrolases and, subsequently its involvement in carbohydrate metabolism.The domain lies downstream of glycosyl hydrolases 42 suggesting that as a domain it might represent the carbohydrate-binding region of the enzyme.	1.03242e-06
NZ_CP014232.1|WP_060957094.1|1229245_1230325_+|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl|CDD|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP014232.1|WP_060957099.1|1238537_1240235_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl|CDD|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	9.26373e-80
NZ_CP014232.1|WP_060957088.1|1218469_1221259_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	0
NZ_CP014232.1|WP_060957084.1|1211658_1212168_-|NUDIX-hydrolase	gnl|CDD|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	6.57346e-49
NZ_CP014232.1|WP_060957100.1|1240236_1241667_-|serine/threonine-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.06537e-71
NZ_CP014232.1|WP_060957091.1|1224031_1225348_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	1.59024e-18
NZ_CP014232.1|WP_060957095.1|1231776_1232994_-|Fic-family-protein	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	5.7817e-28
NZ_CP014232.1|WP_060957086.1|1215217_1216726_+|alpha-galactosidase	gnl|CDD|269892	cd14791, GH36, glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	3.07938e-67
NZ_CP014232.1|WP_060957087.1|1216769_1218080_-|ATP-binding-protein	gnl|CDD|379306	pfam13635, DUF4143, Domain of unknown function (DUF4143). This domain is almost always found C-terminal to an ATPase core family.	1.65977e-25
NZ_CP014232.1|WP_060957092.1|1226362_1227289_-|ADP-ribosylglycohydrolase	gnl|CDD|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	2.19406e-71
NZ_CP014232.1|WP_060957096.1|1233875_1235918_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.28801e-125
NZ_CP014232.1|WP_060957097.1|1235914_1237042_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.43015e-107

Protein sequences

>NZ_CP014232.1|WP_060957091.1|1224031_1225348_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MTDLTITASFPLGEFNAHNGEGRAEWPPAPARVLAAMLSAAHGLGEGITEVEALFRCLPPRITAPPAGERQIGYRRWVPVNNELKTDKNGSPTGIVDRNDRLLEKQAKDPECGMMVGTGADDVVRWTFAADGPADLGILQKVARSVEYLGRPTSPVLLDVVDGAVEVPPGHSCWEPDPTGWIQLRVGTEGLLAALDAREEERRRSTVTGTHPYMSVRPTALYRLVDGRSGDGAAPDTRELLRTCLLYRMLHSGRQGAVLVHASDAALVTEQLRDSLGEAGWMLPLIGGLGRRHLPVLRGVLVAGGSRLASVGLAVRTGVVEARLAETRTLASLPRVLRAATAPSLRWTTVVPTAEEPEGIMDILEECASGLGCRLVGAERHSDSRSDGGVDVQENNGRWHVSIAFDAVVPGPVVFDGSLMVPLGSTTLAVNPRRPRAD
>NZ_CP014232.1|WP_060958164.1|1222827_1224039_+|type-I-U-CRISPR-associated-protein-Cas7
MTTAQEFRSTIGALMEDSAVAGISVNSKYDSLSGMTVTPPAGTIRQKGEVVGFFETVDDGKAATIDTWGSQASRCEVLLASRFRGGTNTLAEVLGFPMVVLVDEDGEVLTTSVELSHRQADATWRLIRKELTDKGVDFEGIQNATRSQPDALLTGFPTAIPFGWWHSQTKRSQKAVDEANKGGKKGGGKDARELNATRDEFLGYYVMNPAESRSARLFTSEIIATGVSERRRMAGKTDPLFAATSNKTTIRGVKLSTLGIGSLPPLDISEAPSDLTYNSIVGKAFFSLAGLRTFAFSRPEPARALVVSLTLLLYRLLQERLDLRAGAELRLREPGLEVKVERHGAPSEPLALPEVDELVDLVRDLGQEIGWNGATVVTITHDSPLGKIILDVDGRKTDGRSDD
>NZ_CP014232.1|WP_060957090.1|1222187_1222763_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MPDRIAVLPLVQALPDLGTPDGVHRRAMSYLPDLRGASRSIRADLGVLYRLALPTEYGGQKGSLVIRFRADLDLPGTQPIEAPSGFAVGQRFTVRVVAEKRHADESGKNRVRAVLDEEAHGWATDLLGRHGLGVSELTVSPRWFVGRRGGRSFTLRDLAGTVNSISEAGASAYHQGIGRGKAYGYGMPLVL
>NZ_CP014232.1|WP_060957089.1|1221347_1222163_+|hypothetical-protein
MSLLPGATLRFEGEAVPVVGYGGDTDELVNVAARGLVERTWGLGERGLRGITTTTPARSAVNVLSHAGWRAADKTSDLSACGPVAVFDASVTSAERLKSTGMQDLQVRSSALTLLSGKSHTAKSVQDTWGLMGASLTTADDAVAAGVAHLDRLVHGDLAVARAKPGLRFSASQATPRITSGSEECDVYPLVDLLAVCGHLLLQPQQREMTREYPAKALTWVLHPVPLTMEAIIDLHESPPPELPWHRWTSLIRGTGFTAKVTSFAPAHPGA
>NZ_CP014232.1|WP_060957088.1|1218469_1221259_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MSSLDFTDLFREITGHEPRDYQVRLAERLARGEPPSHLSVPTGMGKTLAVLIGWLYALAQDAEQVGRRRRRRVVPLRLHLVVDRRAVVDDSFEAAQRIRRALAEGAGDRSAVRYVAEVLRSAFTIPAAAEVLEVRRLRGGLADADRDLTEHTRYPSRPAIILGTLDMTVSRLLFRGYQLSPYRRSIDAALTGMDAFWVLDEAHLSKQALTTLFVLRSEESRLEDRCGGSVPGLQVMPMTATPMTLPTLHRGADQEPTPGLSLDWEEECRLDPQLAARRAHRDGVPVDVHCVDGKAAAALTEQACSRAKELSRGESLVVFCNTLDTVKRVVAGLKKQARKLKDQAPHVDVMVGGMPARRGEHVVEGLSPYRTGAEGRQDAQATVVVATSTLEVGADLDFTHLLTESCQAGSLVQRLGRVNRVGARLDGSVTIVHSTTSKDPIHGGAADAVVELIGGATTLGEVVKRLDEADGREELVNATQVPVIIPPNVFAAYLRTLGSRNDAPVHPWIRPLSDPRPDTFIVFRKSVGDLAGVSSKALQEDLTRWRPDLRAEAWSIPLNDAQEVAKQAVKTQPLVIIDPTSQEPRVLEAGDSPPDLVPGQILVLAPSDGSNPYGLENAGRDYSGQHVMPGATAEEVSKELVSLATGTDRGTSRRKEVILTDLSGGDLRTDDPYADLLEEAALLAVPPGWQIVDDVLGADSLHPWLRLRLVEVATEGPANTEDDADERTLCGHGDRVGERAGQWARAIGLPENLVEDLVTAGYHHDDGKDDPRMQAALGAAVDESGFLVLEEPVQRKHRRQLSKSRLPRRYWNRSMRMAGVPSGWRHEAASADRLEEQLEEGEQTAHDPDLVMHLVLSHHGRFRGPGPVCLPEHGPAPRHQDPNEASWAEAMSRFHRLNDRYGPYTLALIETILRLADWDVSQELEQNHE
>NZ_CP014232.1|WP_060957087.1|1216769_1218080_-|ATP-binding-protein
MTTYQPRLMDQRLEELLRSVPAVSVEGARAVGKTRTARAHGTTFIAVDDPDERAQLAAIGSRFTTLPSPLVIDEWQRMPELWDRVRRAVDDDPSPGRFLLTGSSTPSQAPTHTGAGRIITLRMRPFSLAERAIETPTVSVGRLLGSGLGTQDLSALTPIEGYTSVTIDQYVDEICRSGFPAIREQPPLGRKAQLDGYIEQTLRHDLPEATGGRRRSRTVREWLTAYASAVATTASFTSIAELATRPLSTDMGLATARSYRDHLSGMWLLDPVPGWSPSENEFSRNNLTDKHQLCDPALAARLLGYGPSEVLGVGHPILTSPRGTPRRPRVLGSLFESLVIQSLQVYAEVLSARVFHLRTKGGLQEIDIILEGSDRRVVAIEIKARATPKPEDTKHLRWLRKKIGPRLADAVLVTTGRLAYRDEDGIAVVPAALLGP
>NZ_CP014232.1|WP_060957086.1|1215217_1216726_+|alpha-galactosidase
MIHHITLTGRSIALACDGTVTTQHGAGGATGAVYVEASHLTLLHDMRDGEFYRTGQNSWSPSGWRRLSEAPMRIANEQRRRTADDAPWDDPARHHSAWMAVLEDSAGALLVGCLDGRTPRLRADTAVLEAFTESGDPARWVILPGPATAVMARYARELGESLGARAIEPQSVWCSWYSYYEGISQEALEREIPQVAELGFKTLQIDDGWEVAVGDWEAGESFSDGMEAAASRIREAGMQPGLWVAPFIALPGSRAVRDYPEMFVHNADGGLAVAGSNWGGDYYALDTTHPTAQTYVRKLIAKIVHRWGFSYLKLDFINAAAIPGYRHRQIDREEAYRTGLRLVRDTAGEETFLLGSGALIMPSIGLLDAVRVGPDVAPMWENYASDDLSDAKAYNALHAGINRLWLGRVIGVDPDVVFFRHRRNLLDDTQMQWLRDVAEASRYRCLSDQMTWLDEEEKEAVRAFLAAEDEPLEILGRYRFSLGERQIDLTEAIEGTPSAYPL
>NZ_CP014232.1|WP_081093079.1|1213861_1215061_+|Gfo/Idh/MocA-family-oxidoreductase
MRETSRQLRVGVVGIGARCYLAALADSSPVPARLVAAADTAPDAAARARRLLPEGVAVVADHRDLLGHGIDAVVLTTPDDTHEELACFFLEAGIPVYLEKPLAITIEAADRILETAWRTGTRLYVGHNMRHMEVVRLLKSIIDSGRIGEVKAIWCRHFVGNGGDYYFRDWHAERRHVTGLLLQKAAHDIDVMSWLAGSAPARVVGMGGLMVYGEAERRPAGTSAGTVMQDWFSLDHWPADEVDGLNPVIDVEDHSMLMMTMRNGAMTSYQQCHFTPDYWRSYTVIGTRGRAENLGDGAGDVVKVWTERTEHYAERATQEYVIAEEGTGHDSADQLAIDEFLRFVRDGGATEVSPVSARDAVAAGVLATRSLRSGSVPFDVPELDAELADYFHRGQHNSH
>NZ_CP014232.1|WP_060957085.1|1212363_1213851_+|CCA-tRNA-nucleotidyltransferase
MTAHPAPADPADSPDAAENRGLTPQARRALEGLPPALAALGHAFVRAGHEIALVGGPVRDAFLGVAPHDLDLTTSARPEQTEKILAAWGETTWDVGRAFGTIGARKGSTIVEVTTYRTEAYEVGSRKPQVTYGDTLTGDLTRRDFTVNAMALRLPDLELVDPCGGLADLSAGILRTPVSAEQSFDDDPLRIMRAARFAAQLGFDVEMDVMTAMEEMAPRLEIVSAERVRAELERLLISPWPRRGLELMVHTGVADVVLPELSALRETVDEHKRHKDVYEHTLTVLDQAIDLETGPDGPVPGPDLVLRLAAILHDIGKPATRRFLPDGTVTFHGHDHVGARMTAKRLRALRFDKQTIKDVSRLVELHLRFHGYVDAAWSDSAVRRYATDAGPLLERLHRLTRADVTTRNRRKAAMLDRAYDDLEERIEALRAAEELAAIRPDLDGGQIMAELGVAPGPIVGEAYRFLMDLRMEKGPIGEDLARQALRSWWAARQKS
>NZ_CP014232.1|WP_060957084.1|1211658_1212168_-|NUDIX-hydrolase
MPSPRTRTPRAGNPAHRASGRALPIVNETSAGGLVVDVQNGQAFTAVIARRNRGGRLEWCLPKGHLEGAETPEQAAVREIMEETGITGRVLRHLATIDYWFAGHEHRVHKVVHHFLLEAVSGTLTTENDPDHEAEDVEWVALDDVSHRLAYPNERRIVAAAWDILVGDG
>NZ_CP014232.1|WP_060957092.1|1226362_1227289_-|ADP-ribosylglycohydrolase
MHEDRMVGSLLGLAVGDALGTTVEFQPRGSFPPVTDMVGGGVFGLAPGQWTDDTSMALCIAASLVETGTYDPGDQLGRFVRWYRDGYLSSTGRCFDIGNQTLTALREFEATGEPYRETAGGMSAGNGSLMRLAPVAMAFCDDLEAAGRFCADSSRTTHPAVECVEACGAYGRLIAAAIQGASHAELYAVAVGLAEQVTSPALASILGGSYRVKEREEISSSGYVLHSLEAVLWALARTDTFLDGALLAVNLGDDADTVGAIYGQLAGALYGRSAIPEGWRTRLHDARMIEDLAAGIAERVGTFEVAAG
>NZ_CP014232.1|WP_060957093.1|1227417_1228974_-|DUF4832-domain-containing-protein
MIDSQHDETISAAASGSTSAAAQQSHGPGSDRTPSLGHQVLDRLRRGRKPRLGAILMALVAVVSLATGFRACNCNRAWTEVSAAATPEANPLKGMMPFAPADASHSPALQDNAPPHTMEWLTLPVSDVVTGPGSYAWDKLDAHLNAIASRGHQAVLRFYVDYPGRPSGIPAYLLSSHAVPTHEYTFNGNAPGQSLAPDYNDPEMMSMLTGFVSALGQQYDGDPRLAFITHGLVGFWGEGHTYPMNGKVSGENPSGENWMPSAANQNTLIDTWDGAFQVTPTLARYPSAETVKRGVGYHDDSFGYATMDTADWHFLPKLKEAKADQAWQQHPIGGEVYPGIQECSVRNPGSCMASGSNGGTVDINASIKATHASWLVDNWAFTTTLNGPERERTVQASAETGYDLAVARWRMRNGKVEVQIANNGVAPFYYNWNVEAVAINTSNGMEVGRTTLSGDLRKVAVGKTQTFSGQLPADPAGENTILVRVVNPLDSGQPLRFSSAGQDQTLPGYLTLGRAPTK
>NZ_CP014232.1|WP_060957094.1|1229245_1230325_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MRVFNFSAGPAQLPLPVLEQAASELTSWGGSGMSVLEVSHRGADFVACAADAEATLRRLLSVPEGYRVLFLQGGASAQFAGIPLNLTAPGDTVAYLNTGQWSAKAIKQAGAYELDVVVPADEAASSYTTTPEPGSFTVPETARYLHYTPNETIGGVEFDYVPEAGEVPLVADFSSTILSRPIDVSRYGLIYAGAQKNMGPSGLAVVIVREDLLGRARPVTPTVLDYQKMADADSMLNTPPTFAIYLLGLIGHWIEDGGGLEAMAERNRAKAELLYGYIDSSDFYANPVQERSRSWMNVPFTLADPARDADFLAGAEAAGLTNLKGHRSVGGMRASIYNAMPIEGVRALIDYMTDFAARA
>NZ_CP014232.1|WP_010612931.1|1230391_1231582_+|phosphoglycerate-dehydrogenase
MTTSSVDHKFRIRTLNAISGAGLSRLPDELYEVGGSVEEPDALLVRSTKLHDTPIEDSVLAVARAGAGTNNIPVEALTERGVPVFNTPGANANAVKELVLAGLFIASRNLIPAARFAHTLEGDDAEIAKAVEAGKKQFVGFELPGRTLGVIGLGAIGVQVANAALGLGLNVVGFDPGISVEHAWHLSAEVERADSMEEVFRRADILTVHVPLIPATRGLVSTQRLALMKETAVLLNFARAEIVDTDAVVAALDEGTLRGYVCDFPSTQVHKHPKCISLPHLGASTKEAERNCAIMAADSLRGFLEDGQVHNSVNFPEAVMTRQEGTHRLVIVNRNVPNMVGQVSTIVAQHGQNIANLLNKSRGELAVTLVDVEGEIEPKVLEELRAIDGVLSARGI
>NZ_CP014232.1|WP_060957095.1|1231776_1232994_-|Fic-family-protein
MDDAAAAASWPRVTWETLPWRPRDGAALSARQRSRLPRTYDSAVVPNIADAAIELPTEVMAREAAAVSAITRFDTTAACTLLPFTPLLLRSESSASSRIERLTSSARRIVEEETFGGDRSSGNAALIVANTRTMEAATAAPWPLGLSSLLSMHQALLGDSAPTIAGRLRQEPVWIGGSDLSPAGAMFVPPHHERVPSALEDLLSFLRRSDLPPLTKAALAHAQLETIHPFADGNGRTGRALIHVILSGEGLCLNAPLPLSAILLTDVGTYFRALDKYRAGAPLAVVELFIDAAQRAAELGAWASRELDDVHRQMQDRVSSRAGTPDRDLVRHLVSQPVTDVRGAANAAGVSEQAARRALERLETAGVVRGYQVSRGRRAWRAQDVLDLMDEVAEGLGHRQAPTDM
>NZ_CP014232.1|WP_060957096.1|1233875_1235918_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MTSQFPQVLAGRYEIRDLIGRGGMAEVHLGYDTRLSRVVAIKLLRSDIAGDPTFQARFRREAQSAAALNHPAVVAVYDSGEEELLQPGGASRTVPYIVMEYVEGHTVRELLSEGEAVPIAEAAEIVSGVLDALEYSHRVGIVHRDIKPGNIMLTSTGAVKVMDFGIARAIEDSASTVTQTHTVVGTAQYLSPEQARGESVDARSDLYSTGCLLYELLTGQPPFQGDSAVAIAYQHVREIPKRPSSLAADVPESLDRVILKSLAKSREDRYQDAAHMRADLQAAVRGLSVAAPAADSWSPATSVMASPEAEPVQPTSTFAQVASEPSPMQAAKEAEEPEEKPKSHAWVWILVFLLFMALAVASGLWASGAFDSHPTPTPSPTISKVEVPDTSGQDEESARKTIEGAGLKFAKDEVANEEVSAGLAVSSDPGKGTKVEPNSTVTVHFSTGSAMVKVPDLTGKTQEDARKALKDAGLEGGNTSQEDSATVAKDRVIYTNPPAGNSVARGTTVDLVLSTGNTSVPDVSGQDEATAKKTIEDAGLQFKKGDDVASAEVERGKAVSSDPAAGSSASSGDTITVHFSSGAATQAPNGPVTIPKNLNGKTVEEATAELQKLGLNVTVDYKSSDKVDAGKVIGTSPKAGDQVPAGSTVNLTVSSGKDGGGGDNQQPGNPNPGGGGGGVN
>NZ_CP014232.1|WP_060957097.1|1235914_1237042_-|serine/threonine-protein-kinase
MKPVAGLQLQGRYELVEQIALGGMGQVWRATDLRSGRAVAAKILRPELTGDEIFLSRLRAEAKNSKGLRHPNLAVVLDSGEKDGTGWLIMELVQGRALSDIIAEKGTLSPAEILPVLAQVARALQVVHDSGVVHRDVKPSNILINREGLAKLTDFGISTGINQRPLTASGMVMGTAQYLAPEQAMGNMATPAGDLYGLGIIAYEALVGRRPFSGATQVDIAFAHVNEEVPALPDAVPPQVQAIILKLLAKKPSDRPHSAREVARALDRAVVNLPTDAWDPREALSWEATGRRGPQTRELPRPATVRPGRHAAEEPTPSRTARHASGRSFLGLNLLTLRVVIPALALITLHSTGTLAHAHQVMPALMLSIPVKEVL
>NZ_CP014232.1|WP_060957098.1|1237038_1238541_-|penicillin-binding-protein-2
MNRQIRQVAFLVLVMFATLALSVTSVQGLARPSVWESWSANGALNSDPRNRRTVSRNFDTERGPILLAGGTTIASTQKSDDGQGSEDYQRIYANGPLYAPVTGYFSPAFASMTGMEKEGNSVLNGDDPSLFSSRIKTLITGDSQRGGAVELTIKPEIQQAAYDALGGREGAVVALDPKTGAILALVSTPSYDPSAFATRNGNAANEANTTLSQDSSRPLDNRAIAGNRYPPGSTFKILTTAAALRTGKITPDQEVDAPDTITLPGTSHSLENYGGESCGGGRTTFSKAFAESCNTPFAQLAMNVGEEELSKEAKNWGFDSDLSIPLKVTPSTYPHNDSQAQTAMAGIGQASVQATPLMMAMVAATVANKGEQMTPYLVSRILDPDLNEVSSTSTKVARTPIDSATASSLSSLMQEAVATGTGTSAQVSGVQVAGKTGTAETGTDSGPTTWFVGFAGTDIDKPEIALAVVLDGNAETEDGATGGKVAGPVAAQVIDAAVNQ
>NZ_CP014232.1|WP_060957099.1|1238537_1240235_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MTAAPGPLGAPAGVATIQPAGVAKYSGRWAEAALLGVALVLGLGGFVLTALNRTGSSPAQTVGVAIAFLVLTVLMHLCVRYAAPWADPVLLPTAVALNGIGLAMIRRLDLAYEVNEQWQFYVGSKQLVWTLLGVILFAATLLLLRDYRRLRRWDRWAMWSGLVFLVLPFIPGIGQSINGARIWIRIGPMSFQPAELSKVLLAVFFASYLVANRDNLALAGRKVLWMSLPRARHLGPLFIVWGVSIGVLVLQKDLGSSVLLFGLFVVVLYVATDRPSWLLIGAALFLPAAWFAATHLHHVQQRINGWLHATDDAVYNAAGGSWQLLTGMFGMSTGGLMGAGWGKGSPTLVTFANSDFIFASLGEELGLTGTLVLLVLYLVLIQRGLRTAVSLRDGFGKLLAVGLSFAIALQIFVVIGGVTRLIPLTGLTLPFLAYGGSSLIANWIILALLLRLSDAARRPATHAPRIIDTAELPLSLRRRVQDAGAEETTPEAAGDAPTGTTPADAGGYASPSPAPGFGDLADDARPAVAVSPEAPPPPHTAPDGATLRSSRAPGFTEDSDRRQLP
>NZ_CP014232.1|WP_060957100.1|1240236_1241667_-|serine/threonine-protein-phosphatase
MTISLRFAARSDVGLVRQSNQDSGYAGPHLCLLCDGMGGPAGGDIASAVAVEHLMPLDADSHQAGELLGLMRDAVQAAHTELVTLSSQDPDLAGLGTTCIGVMRSGNKLAMVHVGDSRAYMLRDGTLTQVTTDHTFVEYLVETGRLTRDQARQHPQRSVLLRVLGDTEGEVQLDESIREAVPGDRWLLCSDGLSGPVTAETIGEVLAGVADPGQAADQLIDLALRAGGPDNVTAVVFDVVKDDPEPQTVPQVVGSAATERLAQERAAAAHRAGDEQAKAQEPEAASPAAKAAALMATLEDKPEAASAKESSEVSEAIAAEAATQEKARRRHRRRVFVGSLVLLATLVGASALFYRWTQTRYYVSTYKGEVAIYQGIPQSVGPLKLSHSVKTYADLPVESLDHNIRERLQATVTQPSMSAAETYVDKTVRSYRKQAATPQGTSSPTAKPSSSISPPSAAPSPTSAAPTQPAKPGQEG

Crispr_ID: NZ_CP014232_7

• CRISPR_ID: NZ_CP014232_7
• CRISPR_location: 1318978-1319073
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP014232_7

Consensus_repeat	Method
ACCCAGCGGCGACCTTCCCGTAGA	CRISPRCasFinder

spacers of NZ_CP014232_7

>7.1|1319002|48|NZ_CP014232|CRISPRCasFinder
CCCTTCCGGGAGGTACCCCTTGGCCATCGTAGTCTCATACCGATTCGT

CRISPR arrays and Neighbor proteins around NZ_CP014232_7

CRISPR arrays

The CRISPR arrays of NZ_CP014232_7

>merge|NZ_CP014232|7|1318978-1319073|CRISPRCasFinder
ACCCAGCGGCGACCTTCCCGTAGACCCTTCCGGGAGGTACCCCTTGGCCATCGTAGTCTCATACCGATTCGTACCCAGCGGCGACCTTCCCGTAGA

>NZ_CP014232|7|7|1318978-1319073|CRISPRCasFinder
ACCCAGCGGCGACCTTCCCGTAGA	CCCTTCCGGGAGGTACCCCTTGGCCATCGTAGTCTCATACCGATTCGT
ACCCAGCGGCGACCTTCCCGTAGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060958173.1|1329947_1330265_+|hypothetical-protein	unknown	unknown	gnl|CDD|274799
NZ_CP014232.1|WP_060957134.1|1313278_1313770_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957139.1|1319952_1321299_-|DUF4921-family-protein	unknown	unknown	gnl|CDD|379815
NZ_CP014232.1|WP_081093085.1|1321389_1321626_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957142.1|1324762_1328443_+|helicase	unknown	unknown	gnl|CDD|223627
NZ_CP014232.1|WP_081093087.1|1330455_1332660_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP014232.1|WP_060957132.1|1306066_1307203_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NZ_CP014232.1|WP_010614312.1|1312061_1313117_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957130.1|1301263_1302496_+|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|366234
NZ_CP014232.1|WP_040322114.1|1321612_1321843_-|hypothetical-protein	unknown	unknown	gnl|CDD|378324
NZ_CP014232.1|WP_060957137.1|1315551_1318587_+|hypothetical-protein	unknown	unknown	gnl|CDD|380042
NZ_CP014232.1|WP_060957135.1|1313894_1314335_+|YbjN-domain-containing-protein	unknown	unknown	gnl|CDD|371210
NZ_CP014232.1|WP_050783239.1|1329007_1329211_+|DUF4244-domain-containing-protein	unknown	unknown	gnl|CDD|379429
NZ_CP014232.1|WP_060957140.1|1322037_1323648_+|sodium:proton-antiporter	unknown	unknown	gnl|CDD|223551
NZ_CP014232.1|WP_060957133.1|1307522_1311185_+|DUF3320-domain-containing-protein	unknown	unknown	gnl|CDD|224037
NZ_CP014232.1|WP_060957141.1|1323847_1324507_-|hypothetical-protein	unknown	unknown	gnl|CDD|377552
NZ_CP014232.1|WP_081093181.1|1304159_1306070_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|224099
NZ_CP014232.1|WP_060957131.1|1302945_1304052_+|thiamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270263
NZ_CP014232.1|WP_060957136.1|1314334_1315162_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957143.1|1329411_1329726_+|pilus-assembly-protein-TadE	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060958173.1|1329947_1330265_+|hypothetical-protein	gnl|CDD|274799	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein. Members of this small, highly hydrophobic protein family occur in a pilus/secretion-like region that usually is next to an uncharacterized DEAH-box helicase, in Actinobacteria. Members show sequence similarity to the TadE-like family described by pfam07811. The function is unknown. [Unknown function, General].	0.000247244
NZ_CP014232.1|WP_060957139.1|1319952_1321299_-|DUF4921-family-protein	gnl|CDD|379815	pfam16268, DUF4921, Domain of unknown function (DUF4921). This family consists of uncharacterized proteins around 450 residues in length and is mainly found in various Corynebacterium species. Several proteins are predicted as galactose-1-phosphate uridylytransferases. The function of this family is unknown.	0
NZ_CP014232.1|WP_060957135.1|1313894_1314335_+|YbjN-domain-containing-protein	gnl|CDD|371210	pfam10722, YbjN, Putative bacterial sensory transduction regulator. YbjN is a putative sensory transduction regulator protein found in Proteobacteria. As it is a multi-copy suppressor of the coenzyme A-associated temperature sensitivity in temperature-sensitive mutant strains of Escherichia coli the suggestion is that it both helps CoA-A1 and possibly works as a general stabilizer for some other unstable proteins. This family was expanded to subsume other related families: DUF1790, DUF1821 and DUF2596.	8.40256e-08
NZ_CP014232.1|WP_060957142.1|1324762_1328443_+|helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	2.93106e-103
NZ_CP014232.1|WP_081093087.1|1330455_1332660_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.80416e-178
NZ_CP014232.1|WP_060957132.1|1306066_1307203_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.45895e-99
NZ_CP014232.1|WP_060957130.1|1301263_1302496_+|DDE-type-integrase/transposase/recombinase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	6.57578e-17
NZ_CP014232.1|WP_040322114.1|1321612_1321843_-|hypothetical-protein	gnl|CDD|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	0.00984467
NZ_CP014232.1|WP_060957137.1|1315551_1318587_+|hypothetical-protein	gnl|CDD|380042	pfam17874, TPR_MalT, MalT-like TPR region. This entry contains a series of TPR repeats.	0.0036743
NZ_CP014232.1|WP_060957141.1|1323847_1324507_-|hypothetical-protein	gnl|CDD|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	8.86607e-30
NZ_CP014232.1|WP_060957140.1|1322037_1323648_+|sodium:proton-antiporter	gnl|CDD|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	2.4647e-34
NZ_CP014232.1|WP_060957133.1|1307522_1311185_+|DUF3320-domain-containing-protein	gnl|CDD|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	3.03684e-40
NZ_CP014232.1|WP_050783239.1|1329007_1329211_+|DUF4244-domain-containing-protein	gnl|CDD|379429	pfam14029, DUF4244, Protein of unknown function (DUF4244). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 66 and 95 amino acids in length. There is a conserved EYA sequence motif.	7.81564e-15
NZ_CP014232.1|WP_081093181.1|1304159_1306070_+|iron-ABC-transporter-permease	gnl|CDD|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	3.57328e-78
NZ_CP014232.1|WP_060957131.1|1302945_1304052_+|thiamine-ABC-transporter-substrate-binding-protein	gnl|CDD|270263	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily. Thiamin-binding protein TbpA is the periplasmic component of ABC-type transporter in E. coli, while the transmembrane permease and ATPase are ThiP and ThiQ, respectively. Thiamin (vitamin B1) is an essential confactor in all living systems that most prokaryotes, plants, and fungi can synthesized thiamin. However, in vertebrates, thiamine cannot be synthesized and must therefore be obtained through dietary absorption. In addition to thiamin biosynthesis, most organisms can import thiamin using specific transporters. After binding thiamine with high affinity, TbpA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The thiamine-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.48167e-97

Protein sequences

>NZ_CP014232.1|WP_060957137.1|1315551_1318587_+|hypothetical-protein
MTTREDILERLAYADALGPGPQTSALIAEAVSWADALGDEDLRIATRLALTEAYQQGNEAWKALAPFSWNLGRYQRRPEAFDDAQVRTLHWHFKWAVAVAGANPRVSKDKVRQLEASLEEFYRSGGASMHVVHGERASVAGLLGLEEEAAEELAAWRATHRDENADCEGCDPMRQVAFAYRTEAWELAVATAVPVLTGAVSCSVQPQTTQSLVLLPLLASGRPRAAWEAHLRSYREIRRNPKALISLAYHLEYLALVGRVDRGLELLRRHLSWLAQAESAYVLLSALRGMSLVLREAERAGRGEEALGVEVPAADLWYPLPGLEASTTISRVYAEMTGWARRLAQQFDMRNGNSTISDHLERSLARAAFDAAPGAVHGLGVEVDLLEPSEELPEAAQTSLTVDEDGAAPDVASLLGLVADDNGLVQEHAPRTTSSSQEAAGRRARAATSHQSGDAPFPLVDLVRPRPVRNGEEAVRRYVDHRRTIGSSTMDYWYVVDQVATRDLLPPRGEEIPGLEYHTGLLRAAAMTCRTEMDEAIAERLRIRPLIELAFGPLGAYYVDLLNLDNEITADSIAELSQDVLRDERLQRATSLIGQIEAQVEDLVSTELLDPGGTDALVLAADALLVGASVLTDLHAKDEALGAIQVVARAAEAVPEDRHAERMDDILDMARAEVLAECGDVYNGCLLAEEVMRRHEKVSPVLAARGRRLLGISSMEVGQFDEAIAQFREQANIMLAAGITLYAVASLLSLGSALEASERYLESAEVLESALSLAQRTGATSIALYLHRLLAQTGMAMGEEESVAEHSLEAARILQEQGRRALAGEYLAHAAMAVSNLKDNVRAAALFRQAADLEDTRTDQGCLDRGRALRRSARALVDDLTLPMARGRLDEARQIMEEARQAFAGVADTEGYSSAWEIGDWHDDMAWILWRTGQNWQAVQHCESAYDGYMDTEDRDSASRALCMLARLHAERGERDEALAACARVRDLLGEPHWDGHDALEFVASVEETLR
>NZ_CP014232.1|WP_060957136.1|1314334_1315162_+|hypothetical-protein
MAWWNQPEGSVTPTVTLRRLAAWMAERGHRYDLDLSEGVVHFSVAGFDYVLMVVDRRILAVRAHHRLAAALPGSAELSRVRAVAQEVSSGRLIPAFYTEVDDAGLGLCAEVLTNIGAGLDDAQLAGTLDFILDGVDQALREVLSLLAAQDAAADRRPGVGPETEGASDADGERDGATVIALPEAPRPARAADDPTDVAGAAEAAGGQSGQEGAQTPAATTQGVTGGTTVGTAAGMADATVEMAAVVDGPVPGIPGDAQGGTGAETTDTPKPLLVS
>NZ_CP014232.1|WP_060957135.1|1313894_1314335_+|YbjN-domain-containing-protein
MSAQPALTLQRVETWLSQHGITAGPEEDGAVFMGFPGCDIGVYLHDEEDALVVAGMWRGRPAAERLDEMRAFIDAQHRSTYGPDLAVTPAHDPGHLLLSTQMVAYVGAGMSQAQLDAFMDMGLGMTRAFFATVQERFPELVTWEED
>NZ_CP014232.1|WP_060957134.1|1313278_1313770_+|hypothetical-protein
MVGFRKKSQDSASFSRSSGARADGRAGAASAGAPQRTRAGRNEPTVRTGKGRRSTAAGRRGYTTSEQMDSRCLTLAESASGVLGRSLDQALARLPEGPGAPAASRGSAGPAGSGVPAAGSRPDVVGSPRSTRGRGASAGSVRSTQVGAGQVDTVADIASDIEF
>NZ_CP014232.1|WP_010614312.1|1312061_1313117_+|hypothetical-protein
MSAYVRYYRRLQALTQRLSTYLDRLEARAREFGVSSARTAMEMQITDPASVSAFRSEVEAQIMFLHTKAQRVFAKHFAPFLDIDADLSIDEDRQLSARLQDAANLVGGFEVRLRNIIEEVFAPGRAEQAREEWNRAMTDWRQAQFSFTCDKCGDPVPLPELYHMPVFITCPRCKSRVAFQPTEAMAAAPTWAKEVAKTTCYAEWQKSESEQAAEEGVGLAFFYYVDYAIAHHLMMNRLLPFYVRSQGGQEALRRDVRKALETRTHQLRPDEVSPQYHAMEYVNFMGGLGRSAQILGQEGLEDRRELILQTVRDIMRPDEPLARSILDNTFTEELWSQQAHAADQLSCEVPR
>NZ_CP014232.1|WP_060957133.1|1307522_1311185_+|DUF3320-domain-containing-protein
MNSMNSDNLPVSKVPMPVQSWQKSLLDLSMRNPLINRTSGHAVELRVPPALIGEFEDLVNDKEYITIASGRYRPSGLSDGELQREQVRAESLLRERTVEVELVPKDEYVQRLQSLATSARTAVEETGANNLYLAIGTLHWDSDGSRLHSPLILIPVNLERTGDDFRLILDETGVSTPNYSFLDRFARDTGIELTELRTPKLDEHGIDLRVTLDGVRDRLRRAGWDDVVTPTVHLGLFRFSTYRMWKDLEDHWPTISANPLVAHLMSGGRQDFVDPVGPADRDLDIDEATQNLPLAADSTQARIVADAVAGRSLVVEGPPGTGKSQTVSNLIFRALATGRTIMFVAEKKSALDVVARRLREEAGIGALLLNLHDNGMKPTEVRRALRRALALRRGECGDGAGEVAGCSTPAALRAELAVIRAELDAYRRGLYEPAPGGPSYSGAREVLAQLRDSGESGDRADSAAFEARSALGERARATGLDTFDAAAHNRLIERYRAALDKLRRALTPELLDVVLAHRDQVLQGAAAHAEALRSEVNRRRSVMSVRELIRTYGDLITALTPCLLVSPDSVARFFPANRRYVDIVVFDEASQIRVADAVGAMGRGRSVVVVGDPKQMPPTPSAGETRGEQVPEADSILARCLDSGLLQRRLTWHYRSRDESLVAFSNRHYYDGRLRTFPSPLTMATGSDDGPGGHGISLRRVQGSYFRPEDRARHFGASPNTNPLEAKRVVDEVLRNFEASPDRLPSLGVITFNDRQRDLIENSLREVSSPRVIEALDARDGLFVRNLENVQGEERDTILFSATFAANSRGDLPLNFGVLNHVGGERRLNVAITRARRQVIVFTSFDPQDLHAERTSHRGVKDLRAYLHQAAEGRAPRALPASLSPLNWHRREIAEALEAAGLTVHTGVGHSTFEIDLVLARAGQPDLPAVAVLLDGPQWNKREGVVDRDLLPVDVLHTMGWQRVERVWMPEWVADPKAVVARLVTAAGGYWVQPTVSTVVLESERTDHAGDAAPPIKDDAKADGPDLAPVDGETMAPAAGPRAPGQEYTAWSPAGVRPLEILNRAGTDPEAKKVLVEVATTICQVEAPISRRRLYVKISRAFGLSRTVKSREESIRTALGEAFAYFDEDGFVWATRDDALAAPTYRRNALDHVDSIQEIHPRELVGLMAQARAKNPEWASREDLFMWALKRLSARNRSLAARGVVEALTKALKDVEGVGA
>NZ_CP014232.1|WP_060957132.1|1306066_1307203_+|ABC-transporter-ATP-binding-protein
MSPTASDTSTSTGLSVRGLAVTYGDLHAVDGVDLEVAAGEVVALLGASGSGKSSLLRAVAGLEDVAAGEVAWDGRSMVRVPVHKRGFGLMFQDGQLFEHRDVGSNIAYGLTDLPRAQRGERVREMLELVGLPGFERRRVTTLSGGQAQRVALARALAPAPRLLLLDEPLSALDRALREQLATDVRTILRRGGTTALYVTHDQDEAMTVADRVGVMEAGRLLRLDTPQRLWADPASSKVARFLGFDVVGDLALAPGALRVVEAAEGEPGEPGERGSSVQAEAPATAETLPATLPATLPATVLASRLRRGQWEAEVELDPERLAGLVGSDGPAEPSGVEADAAAGREPARATRATALTRRPHASGARVTLSLDSARTARL
>NZ_CP014232.1|WP_081093181.1|1304159_1306070_+|iron-ABC-transporter-permease
MAGGPRSADSSGGGPVRPDAARAGGPGAGGPRPGWGERAGWTLAVVGPLAFLAVFFAWPVATLMGRGLAPDGALDLSGFGEVLARERTWRILTQTLTQAVLGTAVCVALGIPGALVLYRRAFPGRDLLRGVVTVPFVLPSVVVGVAFHALVTRGGPLEALDLDGTLTAVVAALAFFNYGLVVRTVGTMWSRLDPRAVEAARALGASPMRAFATVTLPALAPAIASAASLTFLFCATAYGVVLVLGGVGIGTIETEIYRLTTQYLDLRGAAVLSVVQLGVIALALWVAERARAATQTRLRLRTEVPAGRLRAADTPALALTAVTVGGLLVAPMAVLVVRSLQRDGAWTLANYTDLGSTGGRSSLLVTVWEAAANSVSVAVAAAAIALSLGVAVCLVVSRRPRSRALARVITGLDAAFMLPLGVSAVTVGFGFLITLARPPLALTRSWWILPLAQAVVAVPLVVRTLLPALRAIDPRQREAAAALGAGPGRVLATVDGPQLLRAGGLAAGFALATSLGEFGATSFLARPQEPTLPVVVYRLIGSPGSQNQGMALAGGVVLAVGSTAVMLGCEWLQTRFGPGRGGSAGTTTRPGGASVHRSAPQRATSADAGQHAAGATGGNNKAARSRGPRTDGGERP
>NZ_CP014232.1|WP_060957131.1|1302945_1304052_+|thiamine-ABC-transporter-substrate-binding-protein
MSIQSNPRSGRPGHPTPALSRRALLAGTAAGAVGLSLAACGKGKKAGSQADSKTVTVVTHDSFHVSEDLQKAFTSETGYTLKIATSGDAGALVNKLVLTKDAPLGDAVFGIDNTYATRALDQGVIDTSATVTLPKGAESYVVADTPALAPIDVGDVCLNIDTGYFTGKGLTPPATFEDLTKPEYKGLFVAINPTNSSPGMAWLLATIGHFGAGSFADYWKQLMANGARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSSSTSALLDTAFRQVEYAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPEALTKFGQLSKSPVKVEPKEITTHREEWLNTWTEAVGK
>NZ_CP014232.1|WP_060957130.1|1301263_1302496_+|DDE-type-integrase/transposase/recombinase
MSVEEFCAQVGISRASFYRIRRRAEHEGLAAALTPRSRAPRHPARVWDQGTDERIAQVRADLLAAGREAGPASVWWVMSQGASVPAPSRATIARSLRRAGLVVPAPRKRPRTSYKRFTRSAANELWQIDGFQWHLEDRLVTVYQVVDDCSRVITALRACWGGESVAGARMVLEEAFATWGRPAAILSDNALAFNTSRITGPGATEKWLASLGVRPISGRVGHPQTQGKVERSHQPAAAWLRAHPASTLEELNAELDRFTSYYNTERQHQGHGVALTPLRVWAQTPRALASPAPIDLERLPAGGGPISLPDPADPDQAVDRARRTVMSNGCVSYKDRALSLGQTMRGVEVTLIEYTTRLDLYDPDGRRFVSLPWPQPTQRQQGNRSTIDTKKPPYRLIPLPPRRPRTSHRS
>NZ_CP014232.1|WP_060957139.1|1319952_1321299_-|DUF4921-family-protein
MLMPYSPSAEPLTRLADGTVKQISPFTGTEVWTVPGRANRPISHPVAEVRPLEEADRTHSCAFCSARYLETPPEKARLVRGADGGFERLDAVAASALFDTVAEFRRVPNLFEILSFDYWHINHGYEIPDAARERMEAYLADPAGVEHVERVARTKLAAAGADPDSWDSMDERTRRTFLAAFFAGGHDVIIGRRHFTDDAHDTTGLAGSGTLSVAEHRAYTRLAIHAMHSLYEANRWVRYVAVFQNWLRPAGASFDHLHKQLVGIDERGVTSQLELQKVRANPNLYNEMAVDYAAYQGLLVASNEHAVAFAGFGHRYPTLEVYSTSAMPEPWLMSREEVDAVSDLVHALHAATGADVPSNEEWHHKPLDVDQPMPWHITLKWRVSTLAGFEGGTKIYLNTIDPWTLHDRVVARLEDLRADRLIAPMAVGEECPTTPNRLLYNPVLTARP
>NZ_CP014232.1|WP_081093085.1|1321389_1321626_-|hypothetical-protein
MTTTDRLRLLDDHVFLVDDVPPAKPSISFSRLKGPKQVTDLHLVDLAARHNAVLATMDGRMVQALTSQDRRHIEIIPL
>NZ_CP014232.1|WP_040322114.1|1321612_1321843_-|hypothetical-protein
MRTTLEIDDRVLSLARERAHRDGVSLGRAVSDLALQGISHGSRTSRHGIPLFFPPAGQQAHVVTPELIEQYRDDDH
>NZ_CP014232.1|WP_060957140.1|1322037_1323648_+|sodium:proton-antiporter
MAEVFTSLLLIVAVAFVAPLISWTIPKRLVPEVVLLILGGMLIGPHGLGLAVEDSSIELLRELGVAFLFLMAGYEIDINELRGAGGRHAAVAWLLSLGLAFGAVSVIGVTGGAASANGIAIATAMTSTAIGTILPILRDRGLLPTAVGASILNHGAVGEVGPVIVMALLLGSRSTWASMVILGVFLIITLLIVRFTSRVKRVGRRLVEAIHLGASTTAQTTIRATVLLLVGLCAIAAIFDLDVILGAFAAGFVLRHALPEGDAEFEEKLDGLAYGFFVPIFFVTSGMGIEAGLNAGDLVNLLAFFVLLVLVRGVPVWLASRAERRRDGSRAYSIRQSLQIAVYSTTALPIIVAVTQVAVSAGAMSTSFASTLVLAGVLSVLVLPAAGLALGHRSDHVPANEVMRVVQGPAAPDGRTPEEATVPVGEHVSEPRRPASPPGGIRLPVGERTPAAGVKRPAQPDLVGLPDLRAQTTPAMARLAELGMHARGLSLEESHRLAARLVEIEQEHALWRERWHRARRHGGTSRAARRRRPRSE
>NZ_CP014232.1|WP_060957141.1|1323847_1324507_-|hypothetical-protein
MLTCEELFLLLTKDSGKPESRMTYPAYGLTGALLTDLLLAGRISLTEERNPRIYIVSAEPTGHPVLDRALEILPAKDGKRFSSLVSWGRLNPTRNIAQSLEAAGVVRIYTGGLFGSLNPSYPTLDPLPERQLRARIDAALRGVQPPTASDVALLSILQALSVAPTVLPQQETGLSRGELKRRIKELSGENPVGRAVQRAVEAVTMAIIAAGSVAAASSS
>NZ_CP014232.1|WP_060957142.1|1324762_1328443_+|helicase
MARAIRHDDWPVELTDDQIISRVGHRAFERGLDYARKGRVRGISVAGDGDIISAQSKGSGAHTYQTMVFRKQGARSAPASWAGTCSCPVGSDCKHTAALLIAARTLAQAEPDAAAPSGGPAPWESRLTDLLQVERAPRRRMALEIIDDPGDMWGTPAGLSMLPLIEGKRGWNRQGAAWTQIVSGGLDDDVDPTVMGVLRELAGMAGGYGFYYADDRLSLTTAPARVWDVLRRGVAAGLTLTTAQRHGMPVYLSEGLRGGIHLTREDDGGIAITPALEIDDVEELRRLQVPGLRLSFSLMPIGDPVHGYYTWMPGRELLLMPLEPRPTEALSRVLQGDGEAITIPAGDVERFETEHLEALTRALPVLSADTSIRMPRPTTLRAALAVNVDTAEHHLSTEWSIRYVGEDGEVRSSHALPDLSAAAEGHIEGGTAGRDIDGETRLAREVLNHLLPLAGRHPALWQPLDLRGMATARFMTETLPVLRELEAFDIEVDDDVPDYREADAAPVITTSVSDDEDRPDWFSLSVRVHVGEEEIPLALLMAAVAGGEPEVLLESGTWVSIDRPEIEALARLMEEGRELADPQAQGELRVSALHAGYYEVLESLGVIERATARWKERVGRLLERARAAEAAAEPSGGRSVGGDDAGGAGERAGEGAGEAAVPAGMRATLRPYQLEGYRWLDFLRQAGLGGVLADDMGLGKTVQVLAAVQRLIEQREEAQGSEPAGSGGPGEPEGTGPVLVIAPTSVVGSWVEQAERFCPGLRVRAVRRTAAKREETLAQIVEGSDVVVTSYTIARLCEEEFIAQDWAWVVCDEAQFVKNHTSATYKAVRRLRSPSTIAITGTPLENSLMDLWALMSIAAPGLLPDPERFGQVYRKPIDRGDTEALGRLRRRMRPFLLRRTKEQVAADLPAKTEQVLSVELGAKHRKAYDQRLARERQRILGLLEEDTAQSRFIALKALTTLRQMALDPALVDGEDGMEPEAAESAGGGEAGEAGKATGGTGGSGRKTARGAKAARGRAAGAPATGRRGPGRRPSPSAKVEVLVEHLGPILSEGHRALVFSQFTRYLSGVREHLEATGVRTAYMDGSTPDRQKVIDAFRAGEADVFLISLKAGGFGLTLTEADYVFLLDPWWNPQAEEQAVDRTHRIGQDKPVMVYRLVSADTIEEKVMALKEKKAELFARVVEGAGEAEAGGEGAGAAGGAAAAAGSGGLSPAALTAAEIRELIEG
>NZ_CP014232.1|WP_050783239.1|1329007_1329211_+|DUF4244-domain-containing-protein
MLARPSDASTLPALLRRLTSKEEGMATAEYAIGTLAAAAFAGLLLALMRSGSLSGALQSIIESALSV
>NZ_CP014232.1|WP_060957143.1|1329411_1329726_+|pilus-assembly-protein-TadE
MVTAETALSLPAVILVLLMVLAAVSAGVTQLRVADAARTAARQAAIGQEDYAGAAQRVAGGVSLGVEQGELTCVTVARPVPGPLGGLGLTARARACTYTEPSSP
>NZ_CP014232.1|WP_060958173.1|1329947_1330265_+|hypothetical-protein
MAVLLAAAVGIAGLIQAQSAAGRARAAADLAAISGATVLSSVVAPGDPCAMAQRVAAANGASVSACSVAGEDVTVSVVVPTTILGRPRQATAQARAGPVDAPPKP
>NZ_CP014232.1|WP_081093087.1|1330455_1332660_-|ABC-transporter-ATP-binding-protein
MSRNASSPMGKKAGRNADRDTRKKAGSGARTAASAIVGPDELSEEDLKLAAEAQAASGDWHDGPPPGKAEAFWPSFKRMVGLLGAYRVSLVVVALAAVGTVALAVAAPKVLGQATNVIFEGVVSTMLPAGTTKAQAIEALRARGMDDFATMLSAMDVIPGAGIDYARLGRILTVVLGLYVGSGLLNWLQGWLINRITIKALYRLRAQVEDKVHRLPLSYFDTVQRGELLSRLTNDVDNITNTLQQSLSGALTAILTVVGVLGMMFSISWKLALVALIMFPLMGVVFGVIGPRSQKAFTHQWARTGKINTRVEESFSGHALVQVYGRTASVREAFAAENEELLRASLRAQFLSGIMMPIMLVIGNINYVAIAVVGGAMVASGSLRLGDVQAFIQYSQQFSQPLGQLGGMATAVQSGTASAERIFELLDAEEERPDDVAPGSAGAAGTAGAAGTASTDAAGEATDAGRAAGTGPSAAAASPKSPAGPGVIEMEHVRFSYSPEVELIRDLSLRVDPGHTVAIVGPTGAGKTTLVNLLMRFYELDGGRILIDGRDIATMTRHDVRRRTGMVLQDPWLFAGTIRENIRYGRPGASDGEVEAAARACFVDHIIKALPQGYDTVLEEDAANISAGERQLLTIARAFVANPAVLILDEATSSVDTRTELLVQQAMNALREGRTSFIIAHRLSTIRDADTILVMEHGDIVEQGSHDELIAAGGAYARLHAAQFAGGATVAVED

Crispr_ID: NZ_CP014232_8

• CRISPR_ID: NZ_CP014232_8
• CRISPR_location: 2347955-2348113
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP014232_8

Consensus_repeat	Method
GTGCTCCGCGTCCCGGCAACAACCCCTTCGCCACCTCCCAGGGCATGCCCCGTC	CRISPRCasFinder

spacers of NZ_CP014232_8

>8.1|2348009|51|NZ_CP014232|CRISPRCasFinder
AGGGCGGTCAGACAGGCCGAGGAGGCCAGCGTTCGGGCCAGTCGCGCTCGG

CRISPR arrays and Neighbor proteins around NZ_CP014232_8

CRISPR arrays

The CRISPR arrays of NZ_CP014232_8

>merge|NZ_CP014232|8|2347955-2348113|CRISPRCasFinder
GTGCTCCGCGTCCCGGCAACAACCCCTTCGCCACCTCCCAGGGCATGCCCCGTCAGGGCGGTCAGACAGGCCGAGGAGGCCAGCGTTCGGGCCAGTCGCGCTCGGGTGCTCCGCGTCCCGGCAACAACCCCTTCGCCACCTCCCAGGGCATGCCCCGTC

>NZ_CP014232|8|8|2347955-2348113|CRISPRCasFinder
GTGCTCCGCGTCCCGGCAACAACCCCTTCGCCACCTCCCAGGGCATGCCCCGTC	AGGGCGGTCAGACAGGCCGAGGAGGCCAGCGTTCGGGCCAGTCGCGCTCGG
GTGCTCCGCGTCCCGGCAACAACCCCTTCGCCACCTCCCAGGGCATGCCCCGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014232.1|WP_060957690.1|2340781_2343805_-|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl|CDD|223989
NZ_CP014232.1|WP_060957695.1|2354731_2355661_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957687.1|2334470_2335559_-|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl|CDD|235465
NZ_CP014232.1|WP_150116291.1|2356487_2357369_-|EamA-family-transporter-RarD	unknown	unknown	gnl|CDD|225510
NZ_CP014232.1|WP_060957699.1|2360483_2362802_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|225669
NZ_CP014232.1|WP_029316401.1|2359337_2359640_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_010613620.1|2345097_2345616_+|ribosome-maturation-factor-RimP	unknown	unknown	gnl|CDD|234627
NZ_CP014232.1|WP_060957698.1|2359650_2360472_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP014232.1|WP_060958231.1|2358195_2359266_+|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl|CDD|235113
NZ_CP014232.1|WP_060957689.1|2338935_2340768_+|proline--tRNA-ligase	unknown	unknown	gnl|CDD|236405
NZ_CP014232.1|WP_060957693.1|2350452_2352024_-|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|239026
NZ_CP014232.1|WP_003786363.1|2345809_2346850_+|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl|CDD|237061
NZ_CP014232.1|WP_060957688.1|2336691_2337717_-|diphosphomevalonate-decarboxylase	unknown	unknown	gnl|CDD|225941
NZ_CP014232.1|WP_060958229.1|2335555_2336674_-|phosphomevalonate-kinase	unknown	unknown	gnl|CDD|130287
NZ_CP014232.1|WP_010613614.1|2337713_2338676_-|mevalonate-kinase	unknown	unknown	gnl|CDD|224493
NZ_CP014232.1|WP_060957694.1|2352389_2354732_+|nitric-oxide-reductase	unknown	unknown	gnl|CDD|225795
NZ_CP014232.1|WP_010613629.1|2357674_2358172_+|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl|CDD|234787
NZ_CP014232.1|WP_060957691.1|2346968_2347301_+|YlxR-family-protein	unknown	unknown	gnl|CDD|377288
NZ_CP014232.1|WP_060958230.1|2343923_2344838_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP014232.1|WP_060957696.1|2355712_2356537_+|slipin-family-protein	unknown	unknown	gnl|CDD|259808

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP014232.1|WP_060957690.1|2340781_2343805_-|DEAD/DEAH-box-helicase-family-protein	gnl|CDD|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	7.51601e-10
NZ_CP014232.1|WP_060957687.1|2334470_2335559_-|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl|CDD|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	1.31802e-160
NZ_CP014232.1|WP_150116291.1|2356487_2357369_-|EamA-family-transporter-RarD	gnl|CDD|225510	COG2962, RarD, Predicted permeases [General function prediction only].	4.61708e-85
NZ_CP014232.1|WP_060957699.1|2360483_2362802_-|FtsX-like-permease-family-protein	gnl|CDD|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	3.26264e-09
NZ_CP014232.1|WP_010613620.1|2345097_2345616_+|ribosome-maturation-factor-RimP	gnl|CDD|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	1.30149e-37
NZ_CP014232.1|WP_060957698.1|2359650_2360472_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.465e-94
NZ_CP014232.1|WP_060958231.1|2358195_2359266_+|tRNA-pseudouridine(55)-synthase-TruB	gnl|CDD|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.08717e-124
NZ_CP014232.1|WP_060957689.1|2338935_2340768_+|proline--tRNA-ligase	gnl|CDD|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP014232.1|WP_060957693.1|2350452_2352024_-|molybdopterin-dependent-oxidoreductase	gnl|CDD|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	3.18741e-58
NZ_CP014232.1|WP_003786363.1|2345809_2346850_+|transcription-termination/antitermination-protein-NusA	gnl|CDD|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	1.42712e-162
NZ_CP014232.1|WP_060957688.1|2336691_2337717_-|diphosphomevalonate-decarboxylase	gnl|CDD|225941	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism].	2.60196e-99
NZ_CP014232.1|WP_060958229.1|2335555_2336674_-|phosphomevalonate-kinase	gnl|CDD|130287	TIGR01220, phosphomevalonate_kinase, phosphomevalonate kinase, ERG8-type, Gram-positive branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase. [Central intermediary metabolism, Other].	1.40745e-106
NZ_CP014232.1|WP_010613614.1|2337713_2338676_-|mevalonate-kinase	gnl|CDD|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	1.2855e-76
NZ_CP014232.1|WP_060957694.1|2352389_2354732_+|nitric-oxide-reductase	gnl|CDD|225795	COG3256, NorB, Nitric oxide reductase large subunit [Inorganic ion transport and metabolism].	4.98062e-165
NZ_CP014232.1|WP_010613629.1|2357674_2358172_+|30S-ribosome-binding-factor-RbfA	gnl|CDD|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	6.63011e-46
NZ_CP014232.1|WP_060957691.1|2346968_2347301_+|YlxR-family-protein	gnl|CDD|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	4.65625e-23
NZ_CP014232.1|WP_060957696.1|2355712_2356537_+|slipin-family-protein	gnl|CDD|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	2.22056e-100

Protein sequences

>NZ_CP014232.1|WP_060957691.1|2346968_2347301_+|YlxR-family-protein
MVTIPHVPERTCIGCRQKAPRTQLLRLVLTPSGELDVDARAVRPGRGAWIHPDPVCLDLTERRRAASRALRTSGPLDVARVRGFLERRLVNDGEVPASRPGERTTDSEGG
>NZ_CP014232.1|WP_003786363.1|2345809_2346850_+|transcription-termination/antitermination-protein-NusA
MDINMPELRGAADELGIDLDNLLPAIEDAILGAYSKVPGAIRGAHVEIDRRTGHMSVLAPEVDEEDQPTGEYFDDTPDDFGRIAQATARSVIVQRIQDRRDFEVLGAFKDKTGELISGTVEQGRDPRIVYVRLDEEHEGIMPPHEQVPGERYRHGDRVRAYVTDVSRGTRGAQIILSRTHPGLVRKLFEREVPELSSGDVEIVSVAREAGHRTKMAVRSKVRGVNAKGACIGPMGQRVRAVMTELGGEKIDIVDYSEDPARFIANALSPARVAAVGVIDAEERTARAIVPDFQLSLAIGKEGQNARLAARLTGWKIDIHADAESGEITPGQGSQSDDVTGPSELGD
>NZ_CP014232.1|WP_010613620.1|2345097_2345616_+|ribosome-maturation-factor-RimP
MAASDQRKDPRQRADALARSLADLLSPIVNDAGLHLESVETTRAGKYSVVRVFVDLLDGPGDLDLDALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSARVRTADDELTGVVTAAEEDDEASDHNGGMVGIEVDGVERRIALGDITEARMVLAGL
>NZ_CP014232.1|WP_060958230.1|2343923_2344838_-|hypothetical-protein
MLAVGTALTATLSGCGLRLGKGSPASLPSASAAETARDGLARQAALISSTAGVVAQAGGGDATTAALAEGVKQTADAQLETLGGVWQPWPSQVPSAYPTVAPVPSASAGASAQDLAAALADGSTLARRAAIAAASEQDVRLFTSLTVAWSLQHDLFQPPSSADKSRVEVAQGSKISSGLLTSYDAARYAMEALAARSDDSQRTRAVADAKAATSVVNAAVAAGSEDKRLGAYAAPSESTDPSVSTQVLWARQVWSNVVSAEVQEAGSAKASSPAREAAVTGAVDAARRATAWGADFSSLPGYAA
>NZ_CP014232.1|WP_060957690.1|2340781_2343805_-|DEAD/DEAH-box-helicase-family-protein
MTSAAAPTAQHPLRRWTRRVPLHDYQQSLLDRLHPDDGATLHLLAPPGAGKTLMGLELAVRNGRRALVLTPTTVIGAQWIHQAQELFTSSFGSPSVTGSVGAHLPGTRPDQAAEAADLTVLTYQSLAVVGSSPTWSNVARSHWVTELTAGGRSAVSAEAWLKRLEADNPRAYTRGLRSRTATIRRQVDELDDDAIDSILGPGARARLDALVTAGVATIVLDECHHLKAHWAVVVYYLVRRLKRVGLSPTLIGLTATEPSGEDRSARRYRALLGDVDAEVPVPAVIRAGHLAPCRQLAWFTLPSPEETEFLATAGEELHHRVGELLLSPDGIDYLLEVVAPPMSSTAPGDGSGSGPLPRIAGADDDHAPTTARPHEEDELVRRIVAGFDADPLLAATAAALLRRTGSYRGTALSTRVVPLLPELDLLDLDDELRLLGRYAHDRLLAVPERRRDWESTRELLRGFGLYLTDSGIRAGRSPVDTITAVSRAKDTAVIDILRHELDSIGDRLRAVVVTDAAEHSAPHRALDVLVPGSHPGPAGGAVRCMSTLLSDADLRSLHPVLLTGSRLSLASGDTSLLDRLRRSTGLALPATDDGWMLSVTGQGVGSAGLVLAVSELVTAGEIRLVVGTRGLLGEGWDCPAVNTLIDLTAATTSASTQQLRGRTMRLDPGWGDKVAHNWSVTCLLPSHPRLRSAPDLNRLRRKAEHLWSLVRIDDPEASPVSASDEPCGTPVVETGLDAMLAPVQRRLLDKLGDGAAPEDIDALNSATLAGLDRRVESRRWLAQAPAAHRVSRRGHGRALEAVEITSAPGLLRRGSPTAFWSAAARAVLDVALSRYDLTADGDSSDGPRPDLVVRESPTDSLGGSRPRVLIGLDGVGTRQSARFADILTELLSSPGRRPRFILEATTATLAQGTAEQPLNGLRRLLGRLLALGAWNHDDSVHLAVPTALARSRADMEAFLHSWSTRVGPCRLHLVADADDAAALLSCLGSGGPTGRVELRRTRRWMED
>NZ_CP014232.1|WP_060957689.1|2338935_2340768_+|proline--tRNA-ligase
MLHRLSTSFIRTLREDPADAEVASHRLLVRACYVRRAAPGVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPALLPAEPYQATGRWDDYGPTLFKLRDRKDGDYLLAPTHEEMFTLAVKDLYSSYKDLPAVIYQIQTKYRDEARPRAGIIRGREFVMKDSYSFDIDDAGLAAAYQAHRDTYERIFTRLGLDYVIVNAMAGAMGGSHSEEFLHPCEIGEDTFVRSSSGYAANAEAVTTVVPEAVDASGIGPARVVDTPDTPTIDSLVELCNRAYPRSDGRAWTAADTLKNVVVTLIHPGGERELLVVGVPGDRDVDMKRLEAAVAPAEVEMAGDTDFETHPELVRGYIGPTAIGPNSPLRRVEKLEDGTEVLAGSVRYLVDPRIVEGTSWVTGANTDKKHVLDLVMGRDFTADGTIEAAEVREGDPAPDGSGPLHLARGIEIGHIFELGRKYSQALGLTVLDENGKARVVTMGSYGIGVSRVMAALAEANHDDKGLTWPVQIAPYHVQVLATGKDQAVFDVAEQIASSLDADGVEVLYDDRRKVSAGVKFADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVSADAAAAELSSTVRAALEAARH
>NZ_CP014232.1|WP_010613614.1|2337713_2338676_-|mevalonate-kinase
MDRHSSIREGHGQTWAKAILLGEHSVVYGHPAVAVPLQDLRMRATASPTSGPSTLSSLDYSGPLDQAGSRFASVARAFEVAREFSGGLVQAFDITTVSDFPHERGLGSSAAAAGAIIRAVLDACGREASSDELFALTQMAEQIAHGKPSGLDAAATCSPCPIRFQGGQMRPLSQRIDNAFLVIADSGIHGSTREAVGGLRRRYESDPDNIGPRINRLGALTQNAIMALDQADAPALGVAMDEAHAVLTELSLSLPILDDLTEAARSAGALGAKLTGGGLGGCVIALVTGESATRRVRAALEQAGAPETWSYRMRISEVDE
>NZ_CP014232.1|WP_060957688.1|2336691_2337717_-|diphosphomevalonate-decarboxylase
MTAVPLGAAAGSSPAAAPTATASANTNIALIKYWGKVDEALAIPATSSLSLTLAGTRTTTTVSFDGGAGAADSVTINGVSPSAVELGRVTRFLDLVRSSSGVATPATVISRASVPLAAGLASSAAGFAALAAAASRAAGMNLDDRALSRLARRGSGSATRSVFGGLVLWNAGHDDASSYAEPVGCEMDLAMVVVVLSERYKPISSTRAMRATMATSPLFPAWVEASGRDLQVALEAVRAGDLARLGEIVEGNALGMHATMIAARPGIVYWLPQTVAALHAIHAMRDEGLPVWATIDAGPNVKVLTEGARAEEIAAALRDRLPGTTVSVRYPGGGVRIEEDL
>NZ_CP014232.1|WP_060958229.1|2335555_2336674_-|phosphomevalonate-kinase
MVSRAPGKLYIAGEYAVVEPGHRAVLVAVNRFITVRITPCSPTGGYAGTISSRLYDTGSRPWRHRPQDGLAEAVGGDDDYVISAIRVVEALVAEGGGRLGSFNLGISSELDEADGRKLGLGSSAAVTVATVRAVAGFYGLSLDDSRVYKLAMLASDAVQPIGSGGDIAASAVTGWVDYASPDRVWLRRARQRAQARGGTGDLLESDWPGLCLRRLPVPSVRLQVGWTGAPASTPALVAGVQAGSRGVDDVYSSFLRASQDTLASLTTAIEDDDAGQVMSAITRNRVLLVQLGRISGRVIETPELTRLVEIARDHGAAAKSSGAGGGDCGIALCPPDNDIAAMSSAWRAASIQPLDLAIYTHDSPVPPMEVTS
>NZ_CP014232.1|WP_060957687.1|2334470_2335559_-|type-2-isopentenyl-diphosphate-Delta-isomerase
MSHESTDSQRASRKDEHLELAVHLHRQDRANAFDDVSFIHHSLPGVSAEQVDIGTTVLGSRWEAPFYINAMTGGTQATAAINADLAEAAAEAGVAIACGSQHVALHDPERADGFHVIRRRAPGAFVLANVGPTVSPQEAARAVEMLEADALQIHLNAAQELVMPEGDRDFSGWEEAVATIVTAVPVPVVVKEVGFGLSRRSIESLARTGVAAVDVAGAGGTDFIAIENERRPQRDLSYLVGWGQSTALCLLESVAVDDPVGLPVLASGGVRNPLDVVRSLALGACAVGASGHVLRTLVKEGPEALRRELSTWGDHVRTLMTLLGAADVAQLRRTDVVVTGRTAEQARLLGVDLTRLAHRSDT
>NZ_CP014232.1|WP_060957693.1|2350452_2352024_-|molybdopterin-dependent-oxidoreductase
MSLLPLAAQTVNDVAQQCVDTETFPLWLRVTHFINFLLMGVLIRSGIEIIASHPRFYFKDQCEPGSEWLRFTRDKVPLEEGAFTARDDQRDLSPLLSLPGRAKIGLGRAWHGVATSFWLLNGIIYVALLVGTGAWHRLVPTTWRILPDAWDSLLTYAHLRTPSLCDFTPYDSLQQLGYFFIVFIAAPLMIITGPVMSPAVVGRFPWYAKMFGGRQAARSLHLIGMFAYLGFAVVHVGLVFIVHAPHNLTHIVFGYYDPNRVGQAYVTVIATIIVVVALWIAMSYWTLTDTRRSQRILWDATRGIRRVTVDRFSSQQAVKRPWTEKDISRFHWVNTRTPSREESPEYQELAANDFADFRLEVGGMVSAPASFSLAELKAISSQSQITMHTCMQGWTGIAKWTGIRVRDLLAQVGQIDPEAGWVMFESFGMAQNMHDGRPVEPYYTCLPLDMALEDDTILAWGRNDEPLSGMFGAPLRLRCETSHGYKMIKWVRSVTLIRHYSEVGDGMGGTREDSGYQDVNARI
>NZ_CP014232.1|WP_060957694.1|2352389_2354732_+|nitric-oxide-reductase
MSSAATTEGAVSRRARLIGKGWIQGVALVMLFGFTVMGLLAYRTYTNSMPQPQKVVTESGETLFTTQDITEGQKLFQARGLMEYGSILGHGGYLGPDFTAEYLRMEATSIKNQLAAQGAADPAAATKEMMRTNRYDSSTGTLVWTDEQVKAYNEAVNHYTKMFGPDAHSHGLKPDLITDPVQVKQVTAFFGWTAWGSSAQRPGHDYSYTNNWPAESLVGNAPTGDLMIWSVLSLIVLIGGTGVMFAIYGRWSQKIGWHSEEAPALSFRQPEDVGLTKSQRVVAWYVFTIAALFLVQTLLGALAEHYRADVLSFFGFDLGRLLPFSLARTWHVQLSLFWTAIGLLAAGLFLTPFIARREPKKQHVLVWTLFIAATVVVVLSCLAEGASQHGLSWAKGPLFAQQWEYLDLPFVFQVLLTLALFVWVFIIWRAMRSRLRNEHVANMPWLFMFAALAIPAFYAVGMMARTGTHVTVAEFWRFWVVHLWVEDFLELFTTVMVAYVFVLLGVVRERIALGIIFMDIILYSAGGVIGTMHHLYFSGTPVEHMALGAFFSAAEVIPLTFLTVEAWAFMQLGANRHGKEAGPFPHRWAVMFLMAVGFWNFLGAGVFGFLVNLPIVSYYEIGTALTANHAHASMMGVYGFMALALGMFALRYLVPADKWPEKLAKTSFWSLNIGLAWMCFATLLPLGILQLRYSVSTGYFEARQLTYVTNSVNTIIEWGRMPGDLIFILGGVLPYLYIAFLGLRNWRRGRTVDTFAEDALYEEIQGGRKAWRGERAELND
>NZ_CP014232.1|WP_060957695.1|2354731_2355661_+|hypothetical-protein
MASPDLSVWLIAVYALIMLAAAWAVDVLGSRSARHSMSWRHSDFMYHDDVDGWRCHEDQWLWPTAFDPDKRVIRYEGAHAICGRCPSKDSCSPTPGPREITRPVDPWPYSDAGRFHRGVGLVIACVGVFIPVLLMVVFHATGDLIVLGTTTVVVVVAGVLPLARHLWNTPDNAPAHLPHVGSQEYQEAEEARRSASTGPVPVSISARPSGYRSVREAAEAIATAQARAAATGRTVHVSFLSGADGTGKADGGTVASAASVEPELRRVTALRTRKRVPTTGAELGADGTRGGARRSWSSAWNEATDTTRR
>NZ_CP014232.1|WP_060957696.1|2355712_2356537_+|slipin-family-protein
MTTTTTAIAAVTVLVLLALALSLKIITQYERGIVFRLGRLRPVYDPGLHLVVPFLERLVRVDTRVVTLTIPPQEVITEDNVPARVNAVVLFNVTDPVKAVMAVENYAIATSQIAQTTLRSVLGRVDLDTVLAHRSALNADLRDIIEKLTEPWGVEVSVVEIKDVEIPEQMQRAMARGAEAERERRAKIINARGELQASEELRQAADTLSKSPASLQLRYLQTLLELGADQNSTVVFPLPMDIIGPLLERFGPQGGLPEANEGEGGEGAGAPRHR
>NZ_CP014232.1|WP_150116291.1|2356487_2357369_-|EamA-family-transporter-RarD
MALVVGCYCLWGFFPLYFHLLSAAGSVEIIGHRILWTLVTCLTLITLRRRWAQLVHVVRSPRLLGMLAVCGLLVSVNWLVYVYGVNSARTADAALGYFINPLVTVALAALVLHERLRPAHRVSIALASAAVALLVALQGALPWISLVLAFSFALYGLVKKQLGPDVDALTGLTVESALVTPIALAYLGHLAWQGQSAWQAPDQGWPIMALLVVAGPVTAVPLLLFAAGTRRVPLSVVGMGQYIAPTIQFLLAWGAFHERIPPARWAAMILVWAAVAVFIGDAVRQLLRRPRPR
>NZ_CP014232.1|WP_010613629.1|2357674_2358172_+|30S-ribosome-binding-factor-RbfA
MADAARARKVADRIHETVARLLQGRIKDPRLGFVTVTDVRVTGDLQQATVFYTVYGSDEEREETAKALRSAKGLIRSEVGKALGIRLTPSLSFQLDALPTTAKTLEDALAQARVRDAQIAKAAEGATYAGDADPYRHDEEDEEAVGGDPQAEEGEQEPATDTEDL
>NZ_CP014232.1|WP_060958231.1|2358195_2359266_+|tRNA-pseudouridine(55)-synthase-TruB
MGRTGRARRRPDVPRGAVTAADGILVVDKPQGLTSHDVVGATRRLAATRKVGHAGTLDPMATGLLLLGIGRATRFLTYLVGADKTYEATVRLGAETTTEDADGQIVAARGCRIEDVPEARLQEALTTLTGPIQQVPSAVSAIKVDGVRAYQRVRDGQDVELQARPVTIHELRLTAEPRKAIVEADGALSDGPDAAEAVDIDILVSCSSGTYVRALARDLGRALGCGAHLTALRRTAVGPFDIDEAHTLADLSAQVETDASSPEPHGVTTLPLEEVARRCFEQLTLTEGEARALRYGQPLDAEVLERAEAPEGRRLQVSAKTAEQRVVAGFAPGGRLVALLRHQGPRARPVLVLDPA
>NZ_CP014232.1|WP_029316401.1|2359337_2359640_+|hypothetical-protein
MSQTGGCRCGCGGHGKRNEQDERAAAPAVAQPVGEGYRPEPVQTSPEVVDAVAIASAVTTALGAGAPQGVTPGHKAGNLLGLRDVSASASGGGGCGCGGH
>NZ_CP014232.1|WP_060957698.1|2359650_2360472_-|ABC-transporter-ATP-binding-protein
MRASTPSRSSWRTGSVAAGPAVPVGAGQPVLRAQHLSKSYHSPVLRDLDLDVEQGQFVAIMGPSGSGKSTLLHCLSGMDRPDAGSVLLGGQEITSLSEKELAALRLTRFGFVFQQAHLLTTLCLLDNIVLPGFLAGLRPRPEVTARGEELMERMGIDELATSAVTEVSGGQLQRAGICRALINDPGIVFADEPTGALNSATALQILDLLGEIHASGTTLVMVTHDSQVAARADRVLVLVDGQITEDLLLGRYEEADGPSRLTAVTEALQRHSV
>NZ_CP014232.1|WP_060957699.1|2360483_2362802_-|FtsX-like-permease-family-protein
MLMRLLKADLARGAVVAATLTALIALAATLMSAGTSLVVDSLSATHRLSQRAKLPDLVQMHSGRIDDRDLQAIETWVQARSDVTDHEVITTLPVARQELSINGVNQSESYNEPAFVTSPKHLDLLLDDDGEPVSPGPGEVVLPIHYRAINSADVGDTVTVSSAGRTTTLTIVGFARDAQMNAAMIPSKRLVVSPKDFSALEQQITEPEYLIEMRLTDSAPPGGVIDAYKEAGLPSNGINVSASMIQLMNSLNAMLIVAVALVVAVILAVVAVLALRYTVLAAVETDLAQIAVLKAIGAPLRRIRRLYVAKYLALSVLGAALGYVAGQPLATALEAPTTLYLGRPATTLWSVGLPILTVLVLALGVIGFTWLALRRIGRISAIEALRSGTSASLRPRRQRWRLTTLRRLPVQVWLGARESLRPSNALMLGVLALCTFTMVLPTNVSSTLSDPRVATYLGAGRADLRIDVRTGVQDLAAVEKTVDSDPRVTRHTTMLRRSYKMSTATGGWQTALIDIGDHEAFPMEYLSGRAPTTDDEIALSYSQAQDTGAKEGATVTVRTADGDKDLTVTGVYQDITNNGHTAKATFDDGAPALWQIVYADAGSTQQASALAKQLSGEYPGIQAISMNQYAAQFFGATGSQVRVVTALACAIALGLSFLITVLFTVLIVSRERPQIGVLMALGCTRRAVAGQYLIRFGLLALVGTALGLLGASALGSPAIGAVMASRGAPDLQLLPNWWLMGLVLPGALLATVVGAVALALRRLRTMTLTTGE

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	AF323672	Bacteriophage bIL311, complete genome	13146-13178	3	0.909
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NC_002670	Lactococcus prophage bIL311, complete genome	13146-13178	3	0.909
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	231598-231630	3	0.909
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	AP014017	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C104A-MedDCM-OCT-S44-C56, *** SEQUENCING IN PROGRESS ***	15102-15134	3	0.909
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	AP014016	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C104A-MedDCM-OCT-S27-C72, *** SEQUENCING IN PROGRESS ***	15506-15538	3	0.909
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	105452-105484	6	0.818
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5077079-5077111	6	0.818
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5041115-5041147	7	0.788
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	MT254578	Bacillus phage Izhevsk, complete genome	148494-148526	7	0.788
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	165196-165227	7	0.781
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NC_048639	Pseudomonas phage ZC08, complete genome	43626-43658	8	0.758
NZ_CP014232_1	1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT	625272-625304	33	NC_048638	Pseudomonas phage ZC03, complete genome	43515-43547	8	0.758
NZ_CP014232_3	3.17|640882|31|NZ_CP014232|CRISPRCasFinder	640882-640912	31	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	116027-116057	8	0.742
NZ_CP014232_3	3.39|640883|30|NZ_CP014232|PILER-CR	640883-640912	30	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	116027-116056	8	0.733
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	400467-400498	8	0.75
NZ_CP014232_4	4.6|643450|37|NZ_CP014232|CRT	643450-643486	37	NC_048098	Arthrobacter phage Andrew, complete genome	13789-13825	8	0.784
NZ_CP014232_4	4.15|643450|38|NZ_CP014232|PILER-CR,CRISPRCasFinder	643450-643487	38	NC_048098	Arthrobacter phage Andrew, complete genome	13788-13825	8	0.789
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	NZ_CP015738	Shinella sp. HZN7 plasmid pShin-02, complete sequence	444534-444565	9	0.719
NZ_CP014232_6	6.7|1225757|37|NZ_CP014232|CRT	1225757-1225793	37	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1065080-1065116	9	0.757
NZ_CP014232_3	3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder	640224-640258	35	NZ_CP011136	Escherichia coli VR50 plasmid pVR50B, complete sequence	34869-34903	10	0.714
NZ_CP014232_3	3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder	640224-640258	35	NZ_CP053232	Escherichia coli strain SCU-306 plasmid pSCU-306-1, complete sequence	21036-21070	10	0.714
NZ_CP014232_3	3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder	640224-640258	35	NZ_CP032516	Escherichia coli strain 118UI plasmid pEco118UIb, complete sequence	38780-38814	10	0.714
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	277412-277443	10	0.688
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MH045569	Mycobacterium phage Schiebel, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MF919497	Mycobacterium phage Chance64, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MF668268	Mycobacterium phage Aroostook, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MK524494	Mycobacterium phage Rabbs, complete genome	2219-2255	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MN444875	Mycobacterium phage Jonghyun, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	NC_031102	Mycobacterium phage Sneeze, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MT818422	Mycobacterium phage Periodt, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	NC_012788	Mycobacterium phage Angel, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	KX443326	Mycobacterium phage BruceB, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MH779509	Mycobacterium phage Kasen3, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	JN412593	Mycobacterium phage Liefie, complete genome	2217-2253	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	NC_008202	Mycobacterium phage Halo, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.5|1225635|37|NZ_CP014232|CRT	1225635-1225671	37	MH450127	Mycobacterium phage Plagueis, complete genome	2218-2254	11	0.703
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MH045569	Mycobacterium phage Schiebel, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MF919497	Mycobacterium phage Chance64, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MF668268	Mycobacterium phage Aroostook, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MK524494	Mycobacterium phage Rabbs, complete genome	2223-2258	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MN444875	Mycobacterium phage Jonghyun, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	NC_031102	Mycobacterium phage Sneeze, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MT818422	Mycobacterium phage Periodt, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	NC_012788	Mycobacterium phage Angel, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	KX443326	Mycobacterium phage BruceB, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MH779509	Mycobacterium phage Kasen3, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	JN412593	Mycobacterium phage Liefie, complete genome	2221-2256	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	NC_008202	Mycobacterium phage Halo, complete genome	2222-2257	11	0.694
NZ_CP014232_6	6.13|1225639|36|NZ_CP014232|CRISPRCasFinder	1225639-1225674	36	MH450127	Mycobacterium phage Plagueis, complete genome	2222-2257	11	0.694
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	CP000385	Mycobacterium sp. MCS Plasmid1, complete sequence	114819-114850	13	0.594
NZ_CP014232_4	4.1|643087|32|NZ_CP014232|CRT	643087-643118	32	NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	140878-140909	13	0.594

1. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to AF323672 (Bacteriophage bIL311, complete genome) position: , mismatch: 3, identity: 0.909

cggattttaagtccgctacgtctgcc-attccgc	CRISPR spacer
cggattttaagtccgcagcgtctgccaattccg-	Protospacer
**************** .******** ****** 

2. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NC_002670 (Lactococcus prophage bIL311, complete genome) position: , mismatch: 3, identity: 0.909

cggattttaagtccgctacgtctgcc-attccgc	CRISPR spacer
cggattttaagtccgcagcgtctgccaattccg-	Protospacer
**************** .******** ****** 

3. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 3, identity: 0.909

cggattttaagtccgctacgtctgcc-attccgc	CRISPR spacer
cggattttaagtccgatgcgtctgccgattccg-	Protospacer
*************** *.******** ****** 

4. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to AP014017 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C104A-MedDCM-OCT-S44-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.909

cggattttaagtccgctacgtctgcc-attccgc	CRISPR spacer
cggattttaagtccgatacgtctaccgattccg-	Protospacer
*************** *******.** ****** 

5. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to AP014016 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C104A-MedDCM-OCT-S27-C72, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.909

cggattttaagtccgctacgtctgcc-attccgc	CRISPR spacer
cggattttaagtccgatacgtctaccgattccg-	Protospacer
*************** *******.** ****** 

6. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 6, identity: 0.818

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
cggattttaagtccgatatgtctgccaattcca	Protospacer
*************** **.******** *.*  

7. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.818

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
cggattttaagtccgctgcctctgccaattggg	Protospacer
*****************.* ******* *. * 

8. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.788

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
aggattttaagtccgctgcctctgccaattggg	Protospacer
 ****************.* ******* *. * 

9. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to MT254578 (Bacillus phage Izhevsk, complete genome) position: , mismatch: 7, identity: 0.788

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
aggggtttaagtcctctatgtctgccattccat	Protospacer
 **. ********* ***.************..

10. spacer 4.1|643087|32|NZ_CP014232|CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 7, identity: 0.781

gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
gcgctgaaggccgcagcggcgtacgtcgtatc	Protospacer
**.***** ************** * * *..*

11. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NC_048639 (Pseudomonas phage ZC08, complete genome) position: , mismatch: 8, identity: 0.758

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
aggattttaagtcctctacctctgcctgttggg	Protospacer
 ************* **** ******  *. * 

12. spacer 1.4|625272|33|NZ_CP014232|PILER-CR,CRISPRCasFinder,CRT matches to NC_048638 (Pseudomonas phage ZC03, complete genome) position: , mismatch: 8, identity: 0.758

cggattttaagtccgctacgtctgccattccgc	CRISPR spacer
aggattttaagtcctctacctctgcctgttggg	Protospacer
 ************* **** ******  *. * 

13. spacer 3.17|640882|31|NZ_CP014232|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gtagcacaagcccctatgaggagctgctcgg	CRISPR spacer
ccggccgccgcccccatgaggagctgctcgg	Protospacer
 ..**    *****.****************

14. spacer 3.39|640883|30|NZ_CP014232|PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gtagcacaagcccctatgaggagctgctcg	CRISPR spacer
ccggccgccgcccccatgaggagctgctcg	Protospacer
 ..**    *****.***************

15. spacer 4.1|643087|32|NZ_CP014232|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
agcctcaacgccgcagcggcgcaggaagtccc	Protospacer
.  ** ***************.****  * **

16. spacer 4.6|643450|37|NZ_CP014232|CRT matches to NC_048098 (Arthrobacter phage Andrew, complete genome) position: , mismatch: 8, identity: 0.784

tgaacgccccgccggccaccatcacgaaccgggtcct	CRISPR spacer
ccaccgccccgccggacaccatcaccaaccggtgccc	Protospacer
. * *********** ********* ******  **.

17. spacer 4.15|643450|38|NZ_CP014232|PILER-CR,CRISPRCasFinder matches to NC_048098 (Arthrobacter phage Andrew, complete genome) position: , mismatch: 8, identity: 0.789

tgaacgccccgccggccaccatcacgaaccgggtcctg	CRISPR spacer
ccaccgccccgccggacaccatcaccaaccggtgcccg	Protospacer
. * *********** ********* ******  **.*

18. spacer 4.1|643087|32|NZ_CP014232|CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 9, identity: 0.719

gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
acggcgtccgcggcagcggcgaaggacttgct	Protospacer
.*. .*  *** ********* *********.

19. spacer 6.7|1225757|37|NZ_CP014232|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

aaggcgtgaagtcgaagccgtgca---ccgcgcggttctt	CRISPR spacer
gcggcgtgaagacgaagccgagcaccgccgcgaggat---	Protospacer
. ********* ******** ***   ***** ** *   

20. spacer 3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder matches to NZ_CP011136 (Escherichia coli VR50 plasmid pVR50B, complete sequence) position: , mismatch: 10, identity: 0.714

ttgaagtcgctcttcctgctggcagttgacgactt	CRISPR spacer
atgaagtagctcttcctgctgccagtgattcaagt	Protospacer
 ****** ************* **** . . *  *

21. spacer 3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder matches to NZ_CP053232 (Escherichia coli strain SCU-306 plasmid pSCU-306-1, complete sequence) position: , mismatch: 10, identity: 0.714

ttgaagtcgctcttcctgctggcagttgacgactt	CRISPR spacer
atgaagtagctcttcctgctgccagtgattcaagt	Protospacer
 ****** ************* **** . . *  *

22. spacer 3.8|640224|35|NZ_CP014232|PILER-CR,CRISPRCasFinder matches to NZ_CP032516 (Escherichia coli strain 118UI plasmid pEco118UIb, complete sequence) position: , mismatch: 10, identity: 0.714

ttgaagtcgctcttcctgctggcagttgacgactt	CRISPR spacer
atgaagtagctcttcctgctgccagtgattcaagt	Protospacer
 ****** ************* **** . . *  *

23. spacer 4.1|643087|32|NZ_CP014232|CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
atgctgaacgccgcagcggtgttggaggatct	Protospacer
...****************.** ***    *.

24. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MH045569 (Mycobacterium phage Schiebel, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

25. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MF919497 (Mycobacterium phage Chance64, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

26. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MF668268 (Mycobacterium phage Aroostook, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

27. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

28. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MN444875 (Mycobacterium phage Jonghyun, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

29. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

30. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MT818422 (Mycobacterium phage Periodt, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

31. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to NC_012788 (Mycobacterium phage Angel, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

32. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to KX443326 (Mycobacterium phage BruceB, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

33. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MH779509 (Mycobacterium phage Kasen3, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

34. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to JN412593 (Mycobacterium phage Liefie, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

35. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to NC_008202 (Mycobacterium phage Halo, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

36. spacer 6.5|1225635|37|NZ_CP014232|CRT matches to MH450127 (Mycobacterium phage Plagueis, complete genome) position: , mismatch: 11, identity: 0.703

gagggatcaaaggccaccaaggccatggtgtcgtccg	CRISPR spacer
ttcgcgacgaaggccaacaacgccatggtgtcgtcgc	Protospacer
   * . *.******* *** **************  

37. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MH045569 (Mycobacterium phage Schiebel, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

38. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MF919497 (Mycobacterium phage Chance64, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

39. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MF668268 (Mycobacterium phage Aroostook, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

40. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

41. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MN444875 (Mycobacterium phage Jonghyun, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

42. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

43. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MT818422 (Mycobacterium phage Periodt, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

44. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to NC_012788 (Mycobacterium phage Angel, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

45. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to KX443326 (Mycobacterium phage BruceB, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

46. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MH779509 (Mycobacterium phage Kasen3, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

47. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to JN412593 (Mycobacterium phage Liefie, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

48. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to NC_008202 (Mycobacterium phage Halo, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

49. spacer 6.13|1225639|36|NZ_CP014232|CRISPRCasFinder matches to MH450127 (Mycobacterium phage Plagueis, complete genome) position: , mismatch: 11, identity: 0.694

gatcaaaggccaccaaggccatggtgtcgtccggtc	CRISPR spacer
cgacgaaggccaacaacgccatggtgtcgtcgctga	Protospacer
 . *.******* *** **************     

50. spacer 4.1|643087|32|NZ_CP014232|CRT matches to CP000385 (Mycobacterium sp. MCS Plasmid1, complete sequence) position: , mismatch: 13, identity: 0.594

---gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
cgcaagttctacgccgcagcggcg--atgctggc-	Protospacer
   . ..*  **************  . .** ** 

51. spacer 4.1|643087|32|NZ_CP014232|CRT matches to NC_008704 (Mycobacterium sp. KMS plasmid pMKMS02, complete sequence) position: , mismatch: 13, identity: 0.594

---gcactgaacgccgcagcggcgtaggacttgcc	CRISPR spacer
cgcaagttctacgccgcagcggcg--atgctggc-	Protospacer
   . ..*  **************  . .** **