Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013237 Streptococcus mutans strain NG8, complete genome 1 crisprs csa3,WYL,cas9,cas1,cas2,csn2,DinG,csm6,cas3,DEDDh 0 5 3 0

Results visualization

1. NZ_CP013237
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013237_1 292186-292552 TypeII II-A,II-B
5 spacers
csn2,cas2,cas1,cas9

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 MK448744 Streptococcus phage Javan377, complete genome 9149-9178 4 0.867
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 MK448745 Streptococcus phage Javan381, complete genome 9149-9178 4 0.867
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 MK448718 Streptococcus phage Javan253, complete genome 11375-11404 4 0.867
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 MK448923 Streptococcus phage Javan380, complete genome 9149-9178 4 0.867
NZ_CP013237_1 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292222-292251 30 NZ_KU176944 Citrobacter freundii strain WCHCF65 plasmid pKPC2_CF65, complete sequence 13098-13127 7 0.767
NZ_CP013237_1 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292222-292251 30 NZ_CP030267 Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-KPC, complete sequence 24619-24648 7 0.767
NZ_CP013237_1 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292222-292251 30 NZ_CP043008 Citrobacter portucalensis strain WCHCP085039 plasmid pKPC2_085039, complete sequence 5306-5335 7 0.767
NZ_CP013237_1 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292222-292251 30 NZ_CP028389 Klebsiella pneumoniae strain WCHKP13F2 plasmid pKPC2_095132, complete sequence 83538-83567 7 0.767
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 NZ_CP053305 Spiroplasma citri strain C5 plasmid pScpC5-1, complete sequence 617-646 7 0.767
NZ_CP013237_1 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292288-292317 30 NC_007386 Spiroplasma citri plasmid pSciA strain GII3 5658-5687 7 0.767
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 MK448768 Streptococcus phage Javan47, complete genome 34641-34670 7 0.767
NZ_CP013237_1 1.3|292354|31|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292354-292384 31 NC_007623 Pseudomonas phage EL, complete genome 12338-12368 8 0.742
NZ_CP013237_1 1.3|292354|31|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292354-292384 31 AJ697969 Pseudomonas phage phiEL complete genome 12338-12368 8 0.742
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 NZ_CP044537 Borrelia sp. CA690 plasmid lp28-4, complete sequence 16190-16219 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 NZ_CP018299 Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence 52545-52574 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606997 Enterobacteria phage RB7, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606996 Enterobacteria phage RB6, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606995 Enterobacteria phage RB5, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606994 Enterobacteria phage RB3, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 MN693979 Marine virus AFVG_250M571, complete genome 24711-24740 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 MN694171 Marine virus AFVG_250M572, complete genome 29021-29050 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606999 Enterobacteria phage RB10, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT 292421-292450 30 KM606998 Enterobacteria phage RB9, complete genome 13097-13126 8 0.733
NZ_CP013237_1 1.5|292487|30|NZ_CP013237|CRT 292487-292516 30 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 166687-166716 8 0.733

1. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MK448744 (Streptococcus phage Javan377, complete genome) position: , mismatch: 4, identity: 0.867

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
ttatgtaactctatgttactaacggaaggc	Protospacer
.* ******** *********** ******

2. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MK448745 (Streptococcus phage Javan381, complete genome) position: , mismatch: 4, identity: 0.867

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
ttatgtaactctatgttactaacggaaggc	Protospacer
.* ******** *********** ******

3. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MK448718 (Streptococcus phage Javan253, complete genome) position: , mismatch: 4, identity: 0.867

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
ttatgtaactcaatgctactgactgaaggc	Protospacer
.* ************.****.*********

4. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MK448923 (Streptococcus phage Javan380, complete genome) position: , mismatch: 4, identity: 0.867

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
ttatgtaactctatgttactaacggaaggc	Protospacer
.* ******** *********** ******

5. spacer 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU176944 (Citrobacter freundii strain WCHCF65 plasmid pKPC2_CF65, complete sequence) position: , mismatch: 7, identity: 0.767

aagctccgtctgtcttgctcttcgcattct	CRISPR spacer
cagctccgtctgtctttcttttcgcctgaa	Protospacer
 *************** **.***** *   

6. spacer 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030267 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-KPC, complete sequence) position: , mismatch: 7, identity: 0.767

aagctccgtctgtcttgctcttcgcattct	CRISPR spacer
cagctccgtctgtctttcttttcgcctgaa	Protospacer
 *************** **.***** *   

7. spacer 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043008 (Citrobacter portucalensis strain WCHCP085039 plasmid pKPC2_085039, complete sequence) position: , mismatch: 7, identity: 0.767

aagctccgtctgtcttgctcttcgcattct	CRISPR spacer
cagctccgtctgtctttcttttcgcctgaa	Protospacer
 *************** **.***** *   

8. spacer 1.1|292222|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028389 (Klebsiella pneumoniae strain WCHKP13F2 plasmid pKPC2_095132, complete sequence) position: , mismatch: 7, identity: 0.767

aagctccgtctgtcttgctcttcgcattct	CRISPR spacer
cagctccgtctgtctttcttttcgcctgaa	Protospacer
 *************** **.***** *   

9. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053305 (Spiroplasma citri strain C5 plasmid pScpC5-1, complete sequence) position: , mismatch: 7, identity: 0.767

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
gtattaaactcaatattactaactgaagct	Protospacer
 * *  ********.************* .

10. spacer 1.2|292288|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NC_007386 (Spiroplasma citri plasmid pSciA strain GII3) position: , mismatch: 7, identity: 0.767

ctttgtaactcaatgttactaactgaaggc	CRISPR spacer
gtattaaactcaatattactaactgaagct	Protospacer
 * *  ********.************* .

11. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 7, identity: 0.767

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
ctagaagatgtaacacaatcatcttatcca	Protospacer
 *  .**** ***** ************ *

12. spacer 1.3|292354|31|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NC_007623 (Pseudomonas phage EL, complete genome) position: , mismatch: 8, identity: 0.742

caattttatcggttccacctagacaaccaga	CRISPR spacer
tgactttaccggttccacctagactacgggc	Protospacer
..*.****.*************** ** .* 

13. spacer 1.3|292354|31|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to AJ697969 (Pseudomonas phage phiEL complete genome) position: , mismatch: 8, identity: 0.742

caattttatcggttccacctagacaaccaga	CRISPR spacer
tgactttaccggttccacctagactacgggc	Protospacer
..*.****.*************** ** .* 

14. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044537 (Borrelia sp. CA690 plasmid lp28-4, complete sequence) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
gcctatttgttaacaaaatcatcttattaa	Protospacer
..**.    ******************.**

15. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018299 (Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
tgctgagatttaacataatcatcaacgcca	Protospacer
  ************* *******    * *

16. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606997 (Enterobacteria phage RB7, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

17. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606996 (Enterobacteria phage RB6, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

18. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606995 (Enterobacteria phage RB5, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

19. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606994 (Enterobacteria phage RB3, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

20. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MN693979 (Marine virus AFVG_250M571, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
tcttgagattcaacaaaatcatctaaagac	Protospacer
 ..*******.************* *  * 

21. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to MN694171 (Marine virus AFVG_250M572, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
tcttgagattcaacaaaatcatctaaagac	Protospacer
 ..*******.************* *  * 

22. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606999 (Enterobacteria phage RB10, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

23. spacer 1.4|292421|30|NZ_CP013237|PILER-CR,CRISPRCasFinder,CRT matches to KM606998 (Enterobacteria phage RB9, complete genome) position: , mismatch: 8, identity: 0.733

atctgagatttaacaaaatcatcttatcaa	CRISPR spacer
aaaaagcatttaactaaatcaccttatcaa	Protospacer
*   .. ******* ******.********

24. spacer 1.5|292487|30|NZ_CP013237|CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

actagcaacacagcacctttcagcgcaagt	CRISPR spacer
cataacaacacagcaccttccagcgcgtag	Protospacer
  **.**************.******. . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 51376 : 65221 18 Streptococcus_phage(84.62%) NA NA
DBSCAN-SWA_2 593377 : 602161 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_3 737515 : 744365 7 Bacillus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage