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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014022 Staphylococcus lugdunensis strain FDAARGOS_141 chromosome, complete genome 4 crisprs DinG,DEDDh,cas3,csa3,WYL 1 0 9 0

Results visualization

1. NZ_CP014022
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014022_1 545874-545960 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014022_2 1062105-1062185 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014022_3 1648160-1648250 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014022_4 2450823-2450912 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP014022_1 1.1|545904|27|NZ_CP014022|CRISPRCasFinder 545904-545930 27 NZ_CP014022.1 1103273-1103299 2 0.926

1. spacer 1.1|545904|27|NZ_CP014022|CRISPRCasFinder matches to position: 1103273-1103299, mismatch: 2, identity: 0.926

gggccccaacaaagagaatttcgaaat	CRISPR spacer
gggccccaacaaagagaaatgcgaaat	Protospacer
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9071 : 39326 32 Staphylococcus_phage(96.15%) tRNA NA
DBSCAN-SWA_2 156764 : 165795 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_3 292428 : 301123 9 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_4 705362 : 713832 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 999578 : 1017359 15 uncultured_Caudovirales_phage(58.33%) NA NA
DBSCAN-SWA_6 1032623 : 1039244 8 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_7 1363568 : 1379994 25 Staphylococcus_phage(50.0%) integrase,terminase attL 1360894:1360953|attR 1373976:1374049
DBSCAN-SWA_8 1707360 : 1745077 34 Paramecium_bursaria_Chlorella_virus(33.33%) integrase,transposase,protease attL 1720318:1720335|attR 1747223:1747240
DBSCAN-SWA_9 2446860 : 2460033 20 Staphylococcus_phage(62.5%) integrase,terminase attL 2448810:2448829|attR 2462639:2462658
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage