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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014031 Hafnia paralvei strain FDAARGOS_158 chromosome, complete genome 1 crisprs DEDDh,WYL,cas3,csa3,DinG 0 1 5 0

Results visualization

1. NZ_CP014031
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014031_1 2779067-2779155 Orphan I-F
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014031_1 1.1|2779096|31|NZ_CP014031|CRISPRCasFinder 2779096-2779126 31 NZ_CP029357 Azospirillum sp. CFH 70021 plasmid unnamed2 543667-543697 6 0.806

1. spacer 1.1|2779096|31|NZ_CP014031|CRISPRCasFinder matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 6, identity: 0.806

gagcgat-acatcagatgcaccagaacggcgt	CRISPR spacer
-agcggcggcagcagatgcaccagaacggcga	Protospacer
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Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2732701 : 2813974 84 Vibrio_phage(19.61%) tRNA,holin,tail,terminase,integrase,portal,plate,protease attL 2716220:2716234|attR 2750649:2750663
DBSCAN-SWA_2 3415654 : 3429688 14 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_3 3794528 : 3804505 6 Ralstonia_phage(66.67%) NA NA
DBSCAN-SWA_4 3903414 : 3911356 6 Escherichia_phage(66.67%) tRNA NA
DBSCAN-SWA_5 4416022 : 4453454 45 Vibrio_phage(28.12%) tail,terminase,integrase,portal,plate,protease attL 4413809:4413837|attR 4453556:4453584
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage