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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014303 Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP014304 Hymenobacter sp. PAMC 26628 chromosome, complete genome 5 crisprs csa3,DEDDh,PD-DExK,cas3 1 1 11 0

Results visualization

1. NZ_CP014304
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014304_1 1695560-1695662 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014304_2 3543831-3543919 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014304_3 3812775-3812973 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014304_4 3859497-3859597 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014304_5 5269297-5269391 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP014304_5 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder 5269330-5269358 29 NZ_CP014304.1 4710158-4710186 2 0.931

1. spacer 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder matches to position: 4710158-4710186, mismatch: 2, identity: 0.931

aatctgtccaactattggggagtactaca	CRISPR spacer
aacctgtccaacttttggggagtactaca	Protospacer
**.********** ***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014304_5 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder 5269330-5269358 29 NZ_CP053905 Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence 44602-44630 4 0.862
NZ_CP014304_5 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder 5269330-5269358 29 NZ_CP038236 Leisingera sp. NJS201 plasmid unnamed2, complete sequence 63261-63289 5 0.828

1. spacer 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder matches to NZ_CP053905 (Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.862

aatctgtccaactattggggagtactaca	CRISPR spacer
gtcctgtccaacttttggggagtactaca	Protospacer
. .********** ***************

2. spacer 5.1|5269330|29|NZ_CP014304|CRISPRCasFinder matches to NZ_CP038236 (Leisingera sp. NJS201 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.828

aatctgtccaactattggggagtactaca	CRISPR spacer
aacctgtccaacaattggggagtagctca	Protospacer
**.********* *********** . **

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 185498 : 219216 30 Trichoplusia_ni_ascovirus(33.33%) tRNA,transposase NA
DBSCAN-SWA_2 2519494 : 2564792 54 uncultured_virus(28.57%) integrase,tRNA,transposase attL 2539927:2539941|attR 2567149:2567163
DBSCAN-SWA_3 2568144 : 2608357 38 Moraxella_phage(12.5%) integrase,transposase attL 2564959:2564978|attR 2587224:2587243
DBSCAN-SWA_4 2648479 : 2677747 30 Mycobacterium_phage(33.33%) integrase,transposase attL 2644730:2644746|attR 2678766:2678782
DBSCAN-SWA_5 3222644 : 3259105 45 Sphingobium_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_6 4572735 : 4625239 54 Tupanvirus(20.0%) tRNA,transposase NA
DBSCAN-SWA_7 4631808 : 4710121 52 Mycobacterium_phage(40.0%) transposase NA
DBSCAN-SWA_8 4998431 : 5019697 22 Bacteroides_phage(50.0%) integrase,transposase attL 5009227:5009244|attR 5032491:5032508
DBSCAN-SWA_9 5052003 : 5078411 30 Trichoplusia_ni_ascovirus(50.0%) integrase,transposase attL 5046847:5046861|attR 5053919:5053933
DBSCAN-SWA_10 5087960 : 5156370 54 Mycobacterium_phage(20.0%) transposase NA
DBSCAN-SWA_11 5216457 : 5266351 42 Bodo_saltans_virus(25.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage