CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP014491	Escherichia coli strain G749 plasmid pG749_3, complete sequence	0 crisprs	NA	0	1
NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	0 crisprs	DEDDh	0	1
NZ_CP014489	Escherichia coli strain G749 plasmid pG749_1, complete sequence	0 crisprs	DEDDh	0	2
NZ_CP014488	Escherichia coli strain G749 chromosome, complete genome	2 crisprs	DinG,cas3,RT,DEDDh,c2c9_V-U4,csa3,WYL	1	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2456 : 60405

Escherichia_phage(68.25%)

tail,portal,head,lysis,terminase,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061158086.1\|2456_3497_+\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	9.9e-126	67.9
WP_061158097.1\|3539_3833_+	hypothetical protein	NA	NA	NA	NA
WP_021531776.1\|3995_4961_-	ParB/RepB/Spo0J family plasmid partition protein	Q6UAV8	Klebsiella_phage	1.9e-131	72.1
WP_001533178.1\|7042_8209_+	plasmid-partitioning protein SopA	O03951	Escherichia_phage	5.2e-216	93.0
WP_021531776.1\|8208_9174_+	ParB/RepB/Spo0J family plasmid partition protein	Q6UAV8	Klebsiella_phage	1.9e-131	72.1
WP_061158097.1\|9336_9630_-	hypothetical protein	NA	NA	NA	NA
WP_061158086.1\|9672_10713_-\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	9.9e-126	67.9
WP_061158085.1\|10722_11004_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	6.3e-19	51.1
WP_061158087.1\|11003_13379_-\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	1.1e-169	70.0
WP_001542091.1\|13443_14043_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	9.8e-102	91.5
WP_061158088.1\|14110_17506_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	90.4
WP_000090891.1\|17566_18199_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_071701511.1\|18135_18879_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	3.0e-145	94.3
WP_001152639.1\|18884_19583_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
WP_000847401.1\|19582_19912_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
WP_061158089.1\|19908_22470_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.3
WP_000459467.1\|22462_22897_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	7.6e-64	99.2
WP_001531341.1\|22878_23301_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.2e-66	91.4
WP_061158098.1\|23316_24057_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	2.3e-132	99.6
WP_000683138.1\|24064_24460_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_000752986.1\|25045_25399_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.6e-62	99.1
WP_024261929.1\|25410_25806_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.0e-59	96.2
WP_000063218.1\|25847_26873_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.4e-188	97.7
WP_001513196.1\|26928_27261_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_061158090.1\|27270_28590_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.4e-232	98.2
WP_061158091.1\|28570_30172_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.2e-309	99.1
WP_000198149.1\|30168_30375_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_061158092.1\|30371_32297_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.2
WP_000453567.1\|32271_32817_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	7.8e-90	93.4
WP_061158093.1\|33364_33814_-	hypothetical protein	I6RSN8	Salmonella_phage	1.4e-60	77.2
WP_044069062.1\|33938_34799_-	hypothetical protein	A0A2I6TCU3	Escherichia_phage	3.1e-101	98.5
WP_001555423.1\|35079_35391_-	DUF4406 domain-containing protein	A0A2I6TCY5	Escherichia_phage	4.2e-56	100.0
WP_001683874.1\|35432_35870_-\|lysis	lysis protein	B9UDJ2	Salmonella_phage	4.2e-70	97.9
WP_001683873.1\|35866_36364_-	lysozyme RrrD	M1FJA0	Enterobacteria_phage	1.9e-87	95.8
WP_001542477.1\|36363_36636_-	hypothetical protein	A0A1V0E5R8	Salmonella_phage	5.5e-36	88.9
WP_024187298.1\|36731_37808_-	site-specific DNA-methyltransferase	A0A2I6TC96	Escherichia_phage	3.9e-194	99.7
WP_001543372.1\|38075_38303_-	hypothetical protein	A0A2I6TC98	Escherichia_phage	2.3e-35	100.0
WP_061158099.1\|38316_38538_-	hypothetical protein	A0A2I6TCC3	Escherichia_phage	3.8e-35	97.3
WP_001495871.1\|38703_39015_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	1.4e-51	100.0
WP_001683870.1\|39014_39302_+	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.5e-44	98.9
WP_029400333.1\|39344_39548_-	hypothetical protein	A0A2I6TCA2	Escherichia_phage	2.0e-27	98.5
WP_029400332.1\|39630_39873_-	hypothetical protein	A0A2I6TCV0	Escherichia_phage	3.4e-37	98.8
WP_061158094.1\|39891_40218_-	hypothetical protein	A0A2I6TCZ1	Escherichia_phage	1.1e-54	99.1
WP_114137793.1\|40233_40761_-	hypothetical protein	A0A0F6TJ66	Escherichia_coli_O157_typing_phage	2.2e-36	92.8
WP_049289880.1\|40974_41724_-	DUF551 domain-containing protein	A0A2I6TCG8	Escherichia_phage	2.0e-72	80.6
WP_024194525.1\|41720_42011_-	DUF4752 family protein	A0A2I6TCB0	Escherichia_phage	2.0e-44	94.8
WP_024167834.1\|42010_42430_-	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	1.3e-71	98.6
WP_061158095.1\|42429_42987_-	3'-5' exoribonuclease	A0A2I6TCA6	Escherichia_phage	4.7e-106	97.8
WP_153275786.1\|43052_43226_-	hypothetical protein	A0A2I6TCC8	Escherichia_phage	1.0e-27	100.0
WP_029400328.1\|43489_44200_-	hypothetical protein	A0A2I6TCB3	Escherichia_phage	7.4e-133	99.6
WP_001386907.1\|44189_44411_-	hypothetical protein	A0A2I6TCB1	Escherichia_phage	2.1e-33	100.0
WP_001495876.1\|44502_45099_+	XRE family transcriptional regulator	A0A2I6TCW0	Escherichia_phage	2.8e-109	100.0
WP_061158096.1\|45344_49340_+	origin of replication binding family protein	A0A2I6TD01	Escherichia_phage	0.0e+00	94.9
WP_001495878.1\|49528_49855_+	hypothetical protein	O64345	Escherichia_phage	9.5e-35	63.6
WP_001555404.1\|49857_50253_+	hypothetical protein	A0A2I6TCB8	Escherichia_phage	1.0e-70	99.2
WP_001555403.1\|50342_51155_+	hypothetical protein	NA	NA	NA	NA
WP_001386895.1\|51535_51700_+	host cell division inhibitor Icd-like protein	A0A2I6TCE0	Escherichia_phage	1.5e-20	100.0
WP_001555402.1\|51696_51930_+	hypothetical protein	A0A2I6TCC2	Escherichia_phage	5.0e-30	92.2
WP_001555401.1\|51926_52709_+	hypothetical protein	A0A2I6TCD0	Escherichia_phage	1.5e-131	90.0
WP_052985248.1\|52880_54776_-	protelomerase	A0A2I6TCW8	Escherichia_phage	0.0e+00	97.8
WP_052985248.1\|55158_57054_+	protelomerase	A0A2I6TCW8	Escherichia_phage	0.0e+00	97.8
WP_001555401.1\|57225_58008_-	hypothetical protein	A0A2I6TCD0	Escherichia_phage	1.5e-131	90.0
WP_001555402.1\|58004_58238_-	hypothetical protein	A0A2I6TCC2	Escherichia_phage	5.0e-30	92.2
WP_001386895.1\|58234_58399_-	host cell division inhibitor Icd-like protein	A0A2I6TCE0	Escherichia_phage	1.5e-20	100.0
WP_001555403.1\|58778_59591_-	hypothetical protein	NA	NA	NA	NA
WP_001555404.1\|59680_60076_-	hypothetical protein	A0A2I6TCB8	Escherichia_phage	1.0e-70	99.2
WP_001495878.1\|60078_60405_-	hypothetical protein	O64345	Escherichia_phage	9.5e-35	63.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP014488

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014488_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014488_1

728673-728814

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014488_1

>merge|NZ_CP014488|1|728673-728814|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP014488|1|1|728673-728814|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014488.1\|WP_000648958.1\|738078_740712_+\|mannosylglycerate-hydrolase	unknown	unknown	gnl\|CDD\|182093
NZ_CP014488.1\|WP_000509910.1\|735253_735976_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	unknown	unknown	gnl\|CDD\|182065
NZ_CP014488.1\|WP_001305582.1\|724894_725002_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014488.1\|WP_000254365.1\|725780_726128_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP014488.1\|WP_000735581.1\|719782_720751_+\|C4-dicarboxylate-ABC-transporter	unknown	unknown	gnl\|CDD\|270387
NZ_CP014488.1\|WP_000263355.1\|725382_725787_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP014488.1\|WP_001235263.1\|727909_728626_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	unknown	unknown	gnl\|CDD\|235652
NZ_CP014488.1\|WP_000785832.1\|723405_724689_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP014488.1\|WP_000568275.1\|745229_746369_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP014488.1\|WP_000725054.1\|740909_742103_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP014488.1\|WP_001295877.1\|718247_718559_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|212158
NZ_CP014488.1\|WP_000884361.1\|743645_745214_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP014488.1\|WP_001181475.1\|728987_731789_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP014488.1\|WP_000025458.1\|734280_735150_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP014488.1\|WP_000775540.1\|726127_727894_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP014488.1\|WP_001048602.1\|733114_734281_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP014488.1\|WP_000099866.1\|731803_733021_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP014488.1\|WP_000399432.1\|718558_719755_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP014488.1\|WP_001531490.1\|736144_738061_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|182066
NZ_CP014488.1\|WP_001237779.1\|720810_721272_+\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632

Protein	Function_ID	Function_description	E-value
NZ_CP014488.1\|WP_000648958.1\|738078_740712_+\|mannosylglycerate-hydrolase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
NZ_CP014488.1\|WP_000509910.1\|735253_735976_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
NZ_CP014488.1\|WP_000025458.1\|734280_735150_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP014488.1\|WP_000254365.1\|725780_726128_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP014488.1\|WP_000735581.1\|719782_720751_+\|C4-dicarboxylate-ABC-transporter	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
NZ_CP014488.1\|WP_000263355.1\|725382_725787_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	3.50714e-82
NZ_CP014488.1\|WP_001235263.1\|727909_728626_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP014488.1\|WP_000568275.1\|745229_746369_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP014488.1\|WP_000725054.1\|740909_742103_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
NZ_CP014488.1\|WP_000785832.1\|723405_724689_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP014488.1\|WP_001295877.1\|718247_718559_+\|UxaA-family-hydrolase	gnl\|CDD\|212158	cd11613, SAF_AH_GD, Domains similar to fish antifreeze type III protein. Altronate dehydratase (EC 4.2.1.7) converts D-altronate into 2-dehydro-3-deoxy-D-gluconate and is part of a bacterial pathway for the degradation of D-galacturonate. D-galactarate dehydratase (EC 4.2.1.42) eliminates water from D-galactarate to yield 5-dehydro-4-deoxy-D-glucarate, initializing the degradation of D-galactarate. The function of the SAF domain in these enzymes is not clear. It may participate in dimerization.	8.994e-32
NZ_CP014488.1\|WP_001181475.1\|728987_731789_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP014488.1\|WP_000884361.1\|743645_745214_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP014488.1\|WP_000775540.1\|726127_727894_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP014488.1\|WP_001048602.1\|733114_734281_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP014488.1\|WP_000099866.1\|731803_733021_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP014488.1\|WP_000399432.1\|718558_719755_+\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
NZ_CP014488.1\|WP_001531490.1\|736144_738061_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
NZ_CP014488.1\|WP_001237779.1\|720810_721272_+\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21

>NZ_CP014488.1|WP_001235263.1|727909_728626_+|succinate-dehydrogenase-iron-sulfur-subunit-SdhB
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP014488.1|WP_000775540.1|726127_727894_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP014488.1|WP_000254365.1|725780_726128_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP014488.1|WP_000263355.1|725382_725787_+|succinate-dehydrogenase-cytochrome-b556-subunit
MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP014488.1|WP_001305582.1|724894_725002_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>NZ_CP014488.1|WP_000785832.1|723405_724689_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>NZ_CP014488.1|WP_001237779.1|720810_721272_+|TRAP-transporter-small-permease
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>NZ_CP014488.1|WP_000735581.1|719782_720751_+|C4-dicarboxylate-ABC-transporter
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>NZ_CP014488.1|WP_000399432.1|718558_719755_+|UxaA-family-hydrolase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>NZ_CP014488.1|WP_001295877.1|718247_718559_+|UxaA-family-hydrolase
MRKRALKLHAKDNCVVALNDIASGDIVWWDEGEMVACSSVTLGHKLACEALNNGDSILKYGAIIGHATRDIAMGEHVHSHNLASNAIAIFHHDDAGYQSEEKA
>NZ_CP014488.1|WP_001181475.1|728987_731789_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP014488.1|WP_000099866.1|731803_733021_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP014488.1|WP_001048602.1|733114_734281_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP014488.1|WP_000025458.1|734280_735150_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>NZ_CP014488.1|WP_000509910.1|735253_735976_-|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>NZ_CP014488.1|WP_001531490.1|736144_738061_+|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>NZ_CP014488.1|WP_000648958.1|738078_740712_+|mannosylglycerate-hydrolase
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEGGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEQIEAQRESLAILKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFDYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRGSQFNLRDGRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQISQIVPSMGYRTLYIEANQPGNVVTPKSKTEGILENAFWQIALNEDGSLRLVDKDSGVRYDRVFQIEEGSDDGDEYDYSPAKEEWAITSANAKPQYDIIHEAWQSRAIIRYEIAVPRNLSERRAKQCSGRVGVETVITLSHNSRRIDADINLDNQADDHRIRVLIPTPFNTDVVLADTQFGSLTRPVKDCAMNVWQQEGWKEAPVPVWNMLNYAVLQEGRNGIAVFSEGLREFEVIGEENKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVSDSQLRGSFSCRLSLFSYIGTPVTAGVAQQARAWLTPVQCYNKIPWDAMKLNKAKFNVPESYSLLKMPPVGCLISALKKAEDRQELILRLFNPAELTSCDATVAFSRKVMTCTETMMNERFNTEKNEVLKELALFLPGQSRTFSYRIV
>NZ_CP014488.1|WP_000725054.1|740909_742103_+|tetratricopeptide-repeat-protein
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>NZ_CP014488.1|WP_000884361.1|743645_745214_+|cytochrome-ubiquinol-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>NZ_CP014488.1|WP_000568275.1|745229_746369_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: NZ_CP014488_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014488_2

894891-894973

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014488_2

>merge|NZ_CP014488|2|894891-894973|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>NZ_CP014488|2|2|894891-894973|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014488.1\|WP_001351020.1\|887266_888223_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP014488.1\|WP_000520781.1\|892051_892372_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP014488.1\|WP_000067797.1\|907246_908590_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP014488.1\|WP_000458841.1\|881381_883034_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP014488.1\|WP_000491137.1\|883177_884077_-\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP014488.1\|WP_001043561.1\|898333_900100_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP014488.1\|WP_000850306.1\|910211_912656_+\|dimethylsulfoxide-reductase-subunit-A	unknown	unknown	gnl\|CDD\|184952
NZ_CP014488.1\|WP_000599803.1\|885611_887270_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP014488.1\|WP_000934041.1\|892402_894679_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP014488.1\|WP_000410785.1\|891504_891729_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP014488.1\|WP_001241674.1\|895865_896570_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP014488.1\|WP_000077041.1\|902359_906466_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP014488.1\|WP_001385255.1\|900222_901188_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP014488.1\|WP_000746478.1\|888373_889489_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP014488.1\|WP_001040187.1\|895362_895581_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP014488.1\|WP_000188152.1\|889485_891432_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP014488.1\|WP_001295343.1\|906624_907236_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP014488.1\|WP_000886683.1\|908680_909973_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP014488.1\|WP_001202204.1\|896611_898333_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP014488.1\|WP_000488716.1\|884491_885187_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453

Protein	Function_ID	Function_description	E-value
NZ_CP014488.1\|WP_001351020.1\|887266_888223_-\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.43529e-131
NZ_CP014488.1\|WP_000520781.1\|892051_892372_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP014488.1\|WP_000067797.1\|907246_908590_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP014488.1\|WP_000458841.1\|881381_883034_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP014488.1\|WP_000491137.1\|883177_884077_-\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117
NZ_CP014488.1\|WP_001043561.1\|898333_900100_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP014488.1\|WP_000850306.1\|910211_912656_+\|dimethylsulfoxide-reductase-subunit-A	gnl\|CDD\|184952	PRK14990, PRK14990, anaerobic dimethyl sulfoxide reductase subunit A; Provisional.	0
NZ_CP014488.1\|WP_000599803.1\|885611_887270_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP014488.1\|WP_000934041.1\|892402_894679_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP014488.1\|WP_000410785.1\|891504_891729_-\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP014488.1\|WP_001241674.1\|895865_896570_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
NZ_CP014488.1\|WP_000077041.1\|902359_906466_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP014488.1\|WP_001385255.1\|900222_901188_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP014488.1\|WP_000746478.1\|888373_889489_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP014488.1\|WP_001040187.1\|895362_895581_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP014488.1\|WP_000188152.1\|889485_891432_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP014488.1\|WP_001295343.1\|906624_907236_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP014488.1\|WP_000886683.1\|908680_909973_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP014488.1\|WP_001202204.1\|896611_898333_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP014488.1\|WP_000488716.1\|884491_885187_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144

>NZ_CP014488.1|WP_000934041.1|892402_894679_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP014488.1|WP_000520781.1|892051_892372_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP014488.1|WP_000410785.1|891504_891729_-|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP014488.1|WP_000188152.1|889485_891432_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP014488.1|WP_000746478.1|888373_889489_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP014488.1|WP_001351020.1|887266_888223_-|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>NZ_CP014488.1|WP_000599803.1|885611_887270_+|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP014488.1|WP_000488716.1|884491_885187_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP014488.1|WP_000491137.1|883177_884077_-|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP014488.1|WP_000458841.1|881381_883034_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP014488.1|WP_001040187.1|895362_895581_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP014488.1|WP_001241674.1|895865_896570_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP014488.1|WP_001202204.1|896611_898333_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP014488.1|WP_001043561.1|898333_900100_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP014488.1|WP_001385255.1|900222_901188_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP014488.1|WP_000077041.1|902359_906466_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP014488.1|WP_001295343.1|906624_907236_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP014488.1|WP_000067797.1|907246_908590_+|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP014488.1|WP_000886683.1|908680_909973_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP014488.1|WP_000850306.1|910211_912656_+|dimethylsulfoxide-reductase-subunit-A
MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGINNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDTKRVDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
NZ_CP014488_1	1.1\|728720\|48\|NZ_CP014488\|CRISPRCasFinder	728720-728767	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|728720|48|NZ_CP014488|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

892051 : 987163

Escherichia_phage(33.93%)

tail,tRNA,lysis,terminase,protease,portal,integrase,plate,capsid,holin,head

attL 891986:892001|attR 969094:969109

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
891986:892001	attL	NA	NA	NA	NA
WP_000520781.1\|892051_892372_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934041.1\|892402_894679_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_001040187.1\|895362_895581_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241674.1\|895865_896570_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202204.1\|896611_898333_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.2e-14	30.8
WP_001043561.1\|898333_900100_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
WP_001385255.1\|900222_901188_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.6
WP_000077041.1\|902359_906466_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_001295343.1\|906624_907236_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067797.1\|907246_908590_+	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_000886683.1\|908680_909973_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000850306.1\|910211_912656_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
WP_000213098.1\|912666_913284_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000534666.1\|913285_914149_+	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_000165876.1\|914184_914811_-	hydrolase	NA	NA	NA	NA
WP_000109283.1\|915124_916273_+	MFS transporter	NA	NA	NA	NA
WP_000067979.1\|916369_917167_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.3e-21	26.6
WP_000023390.1\|917198_918194_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	5.4e-190	100.0
WP_001389238.1\|918287_918587_-	helix-turn-helix transcriptional regulator	Q1JS29	Enterobacteria_phage	3.0e-51	100.0
WP_001389237.1\|918695_919052_+	hypothetical protein	Q1JS28	Enterobacteria_phage	1.5e-62	99.2
WP_001475191.1\|919229_919730_+	hypothetical protein	S4TTB7	Salmonella_phage	6.5e-91	98.8
WP_000557703.1\|919793_920018_+	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_061157860.1\|920017_920320_+	DUF5405 family protein	S4TUD1	Salmonella_phage	5.5e-45	98.0
WP_001113263.1\|920319_920544_+	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	2.2e-35	100.0
WP_000027664.1\|920540_920816_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_061157861.1\|920805_923088_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.5
WP_061157862.1\|923204_925037_+	hypothetical protein	Q2P9X5	Enterobacteria_phage	1.5e-89	32.3
WP_000038182.1\|925376_926411_-\|portal	phage portal protein	Q858W8	Yersinia_virus	2.4e-201	99.7
WP_000156872.1\|926410_928183_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	100.0
WP_001085953.1\|928356_929211_+\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	4.6e-137	100.0
WP_061157863.1\|929269_930343_+\|capsid	phage major capsid protein, P2 family	Q94MI3	Enterobacteria_phage	5.7e-201	99.4
WP_061157864.1\|930346_931090_+\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	1.9e-126	97.6
WP_000988633.1\|931189_931699_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_000846399.1\|931698_931902_+\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000123123.1\|931905_932187_+\|holin	holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_001144101.1\|932186_932684_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_061157865.1\|932698_933124_+	hypothetical protein	M1SV74	Escherichia_phage	1.8e-57	90.1
WP_061157866.1\|933111_933537_+\|lysis	LysB family phage lysis regulatory protein	M1SNP0	Escherichia_phage	1.6e-66	97.9
WP_001440152.1\|933508_933682_+	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_001406878.1\|933644_934112_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	6.7e-82	99.4
WP_001001780.1\|934104_934557_+	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
WP_061157867.1\|934623_935259_+\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	4.5e-113	98.6
WP_000127163.1\|935255_935603_+\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001121475.1\|935607_936516_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	3.4e-162	100.0
WP_001285323.1\|936508_937039_+\|tail	phage tail protein I	Q858V5	Yersinia_virus	1.3e-102	99.4
WP_061157868.1\|937049_939668_+\|tail	phage tail protein	Q858V4	Yersinia_virus	2.5e-282	72.4
WP_061157869.1\|939667_940246_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.7e-69	66.0
WP_061157870.1\|940940_941651_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_061157871.1\|941689_942334_-	hypothetical protein	NA	NA	NA	NA
WP_061157872.1\|942701_943892_+\|tail	phage tail sheath protein	Q858V1	Yersinia_virus	1.1e-224	99.5
WP_001251412.1\|943904_944423_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	3.2e-93	99.4
WP_001031303.1\|944479_944755_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|944787_944907_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_061157873.1\|944899_947347_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	95.2
WP_000978896.1\|947361_947841_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	6.6e-85	100.0
WP_000882966.1\|947840_949004_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	1.8e-205	99.7
WP_000468308.1\|949085_949304_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001292822.1\|949622_951905_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
WP_001295917.1\|951959_952817_-	formate transporter FocA	NA	NA	NA	NA
WP_000194832.1\|953222_954983_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000642852.1\|955112_955805_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057158.1\|956003_957092_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
WP_000445240.1\|957162_958446_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_001385260.1\|958615_959380_+	metallopeptidase YcaL	NA	NA	NA	NA
WP_000125016.1\|959552_960236_+	(d)CMP kinase	NA	NA	NA	NA
WP_000140327.1\|960346_962020_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_000167336.1\|962179_962464_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_000705731.1\|962669_964934_+	ComEC family protein	NA	NA	NA	NA
WP_000551259.1\|964970_966719_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	3.3e-57	29.8
WP_000570547.1\|966715_967702_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000056492.1\|967738_968971_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000350057.1\|969022_969205_+	protein YcaR	NA	NA	NA	NA
969094:969109	attR	NA	NA	NA	NA
WP_000011610.1\|969201_969948_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000436917.1\|970101_970995_+	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000899600.1\|970971_971751_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_001295930.1\|971886_972672_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288856.1\|972668_973991_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_001295931.1\|973971_974676_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572654.1\|974675_979136_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_000925990.1\|979396_981244_+	L,D-transpeptidase	NA	NA	NA	NA
WP_001295932.1\|981424_981973_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
WP_001109456.1\|981999_982647_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA
WP_000462681.1\|982696_983887_-	aspartate transaminase	NA	NA	NA	NA
WP_000977908.1\|984071_985160_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.8e-99	54.3
WP_000117888.1\|985762_987163_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	6.9e-82	36.1

DBSCAN-SWA_2

1807342 : 1895588

104

Escherichia_phage(22.73%)

tail,tRNA,transposase,terminase,plate,portal,integrase,capsid,holin

attL 1853041:1853100|attR 1895650:1895774

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114137791.1\|1807342_1808691_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.7e-74	52.4
WP_000568520.1\|1808800_1809811_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|1809819_1810431_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_072093883.1\|1810569_1810635_-	hypothetical protein	NA	NA	NA	NA
WP_001024911.1\|1810705_1811308_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|1811309_1811831_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|1811865_1812606_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077249130.1\|1812634_1813087_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258676.1\|1813079_1814852_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891625.1\|1815161_1815728_+	hydrolase	NA	NA	NA	NA
WP_000639277.1\|1815724_1816543_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
WP_000252980.1\|1816595_1816991_+	hypothetical protein	NA	NA	NA	NA
WP_000019588.1\|1817031_1817775_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_001576787.1\|1817771_1818743_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000176764.1\|1818778_1821208_-	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_001214293.1\|1821232_1822333_-	cytochrome c	NA	NA	NA	NA
WP_001185734.1\|1822720_1823467_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001490174.1\|1823480_1824047_-	VOC family protein	NA	NA	NA	NA
WP_001025326.1\|1824262_1825996_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001202076.1\|1826048_1826441_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066973.1\|1826440_1828519_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278946.1\|1828511_1829660_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_001576788.1\|1829848_1830493_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763867.1\|1830503_1830893_-	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036371.1\|1830907_1831957_-	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204320.1\|1831959_1832820_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_001296146.1\|1833110_1834772_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|1834916_1835420_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_001531763.1\|1835440_1837405_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795641.1\|1837409_1838336_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906342.1\|1838332_1839220_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|1839346_1839925_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|1839927_1840278_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122413.1\|1841057_1841486_+	universal stress protein UspC	NA	NA	NA	NA
WP_001296148.1\|1841492_1842917_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001296149.1\|1842891_1843692_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000987895.1\|1843858_1844848_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187827.1\|1844859_1846374_-	arabinose ABC transporter ATP binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_000548680.1\|1846443_1847433_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_000179469.1\|1848229_1848733_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|1848810_1849062_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|1849176_1849263_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237881.1\|1849526_1849850_+	hypothetical protein	NA	NA	NA	NA
WP_000917208.1\|1850021_1850519_+	non-heme ferritin	NA	NA	NA	NA
WP_000377224.1\|1850556_1850796_-	YecH family protein	NA	NA	NA	NA
WP_000797555.1\|1850986_1852198_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847882.1\|1852248_1852914_-	UPF0149 family protein YecA	NA	NA	NA	NA
1853041:1853100	attL	NA	NA	NA	NA
WP_001296152.1\|1853385_1853805_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
WP_001531766.1\|1853971_1855015_-	hypothetical protein	R9TNM7	Vibrio_phage	2.0e-33	28.5
WP_001531767.1\|1855018_1855243_-	hypothetical protein	NA	NA	NA	NA
WP_001531768.1\|1855404_1855794_-\|tail	phage tail protein	E5FFG4	Burkholderia_phage	1.0e-14	37.9
WP_001018353.1\|1855829_1857470_-	hypothetical protein	A0A2I7R3J9	Vibrio_phage	1.2e-19	29.3
WP_000444667.1\|1857578_1857860_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000785563.1\|1857872_1858385_-\|tail	phage tail protein	NA	NA	NA	NA
WP_000626358.1\|1859900_1860290_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
WP_001531771.1\|1860289_1861474_-\|tail	phage tail protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
WP_000203868.1\|1861466_1862093_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
WP_000633314.1\|1862095_1863016_-\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	6.4e-68	47.8
WP_000901289.1\|1863012_1863354_-\|plate	phage baseplate assembly protein	D4HTV2	Vibrio_phage	1.1e-20	51.6
WP_000079174.1\|1863356_1864259_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_000015612.1\|1864239_1864776_-	hypothetical protein	NA	NA	NA	NA
WP_000774516.1\|1864772_1865453_-	hypothetical protein	NA	NA	NA	NA
WP_001531773.1\|1865484_1865865_-	hypothetical protein	NA	NA	NA	NA
WP_000105179.1\|1865861_1866281_-	DNA-packaging protein	NA	NA	NA	NA
WP_001283997.1\|1866315_1867350_-\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
WP_000206292.1\|1867408_1867738_-	hypothetical protein	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
WP_001145892.1\|1867737_1869045_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
WP_000126513.1\|1869044_1870619_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.6e-190	64.0
WP_000203897.1\|1870615_1870849_-	hypothetical protein	NA	NA	NA	NA
WP_000148195.1\|1870848_1872711_-\|terminase	phage terminase large subunit family protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
WP_000168117.1\|1872697_1873264_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
WP_001531775.1\|1873632_1873878_+	hypothetical protein	NA	NA	NA	NA
WP_000734931.1\|1873937_1874132_-	hypothetical protein	NA	NA	NA	NA
WP_000131873.1\|1874139_1874619_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
WP_000172496.1\|1874618_1874891_-\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
WP_001294589.1\|1874890_1875274_-	hypothetical protein	NA	NA	NA	NA
WP_000064384.1\|1875386_1876058_-	antitermination protein	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
WP_000717783.1\|1876057_1876351_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
WP_000057010.1\|1876347_1876944_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.5e-70	64.1
WP_001025459.1\|1877021_1877201_-	hypothetical protein	NA	NA	NA	NA
WP_000847617.1\|1877352_1877994_-	hypothetical protein	NA	NA	NA	NA
WP_000536919.1\|1878237_1878471_+	hypothetical protein	NA	NA	NA	NA
WP_000224749.1\|1878869_1879358_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	6.4e-27	42.7
WP_001138663.1\|1879367_1879973_+	hypothetical protein	NA	NA	NA	NA
WP_000536231.1\|1880435_1881134_-	hypothetical protein	Q858R8	Enterobacteria_phage	1.5e-117	91.4
WP_001237642.1\|1882321_1883245_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001531776.1\|1883419_1884208_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
WP_000466605.1\|1884480_1884702_-	hypothetical protein	NA	NA	NA	NA
WP_000661082.1\|1884889_1885114_-	hypothetical protein	NA	NA	NA	NA
WP_000875806.1\|1885110_1885422_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
WP_000918616.1\|1885418_1885655_-	hypothetical protein	NA	NA	NA	NA
WP_000214056.1\|1885656_1886067_-	hypothetical protein	NA	NA	NA	NA
WP_000609322.1\|1886105_1887521_-	AAA family ATPase	H9C165	Pectobacterium_phage	6.6e-173	66.7
WP_001023813.1\|1887510_1888266_-	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
WP_000943914.1\|1888262_1888487_-	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
WP_000431205.1\|1888526_1889003_-	hypothetical protein	H9C162	Pectobacterium_phage	1.9e-23	48.6
WP_000360804.1\|1889061_1889292_-	transcriptional regulator	H6WRX5	Salmonella_phage	1.5e-21	63.2
WP_001296165.1\|1889390_1889804_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
WP_000388260.1\|1890814_1891135_+	hypothetical protein	NA	NA	NA	NA
WP_000151806.1\|1891165_1893382_+	hypothetical protein	H9C157	Pectobacterium_phage	4.7e-101	35.6
WP_000100753.1\|1893378_1893948_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
WP_000916334.1\|1893947_1894130_+	hypothetical protein	NA	NA	NA	NA
WP_000833838.1\|1894339_1894603_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
WP_001531780.1\|1894571_1895588_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.1e-126	63.6
1895650:1895774	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1913832 : 1991406

Escherichia_phage(37.25%)

tail,transposase,terminase,protease,portal,integrase,capsid,holin,head

attL 1957870:1957884|attR 1996669:1996683

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001347174.1\|1913832_1914357_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-33	60.0
WP_000879824.1\|1914513_1915311_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001310919.1\|1915320_1915872_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_001070440.1\|1916040_1916373_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001274299.1\|1916716_1917031_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_000994425.1\|1917245_1918904_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067950.1\|1918896_1919892_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001282677.1\|1919884_1920571_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213308.1\|1920570_1921944_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_001619549.1\|1921962_1922406_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000620069.1\|1922402_1923530_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000133106.1\|1923634_1924099_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_001295641.1\|1924103_1925108_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282103.1\|1925104_1925518_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001313947.1\|1925520_1925886_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253318.1\|1925885_1926623_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187358.1\|1926632_1926902_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000983988.1\|1926910_1927696_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103992.1\|1927985_1928609_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_071524607.1\|1928652_1928895_-	protein DsrB	NA	NA	NA	NA
WP_000844800.1\|1929003_1929231_+	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000491527.1\|1929526_1930342_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001531784.1\|1930338_1932033_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000009307.1\|1932203_1932386_-	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_000922683.1\|1932464_1933382_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212226.1\|1933554_1934475_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000228686.1\|1934463_1934934_-	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	5.2e-34	48.3
WP_001157265.1\|1934914_1936333_-	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
WP_001296176.1\|1936399_1937095_-	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.7
WP_001330593.1\|1937134_1937500_-	hypothetical protein	NA	NA	NA	NA
WP_000824383.1\|1938065_1939181_+	outer membrane protein F	Q1MVN1	Enterobacteria_phage	2.9e-91	47.4
WP_000218217.1\|1939773_1940625_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826711.1\|1940732_1942091_-	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_001347103.1\|1942090_1942762_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000920127.1\|1942894_1943308_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_000740067.1\|1943416_1944421_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240063.1\|1944421_1945057_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_099156434.1\|1945140_1946489_-\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_001007778.1\|1946749_1947400_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_061158032.1\|1948479_1948767_-	hypothetical protein	NA	NA	NA	NA
WP_061157892.1\|1948809_1949850_-\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	5.0e-146	78.1
WP_001544317.1\|1949862_1950132_-	hypothetical protein	NA	NA	NA	NA
WP_061157893.1\|1950131_1952489_-\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	1.1e-119	50.8
WP_001228228.1\|1952553_1953153_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.2e-102	93.0
WP_061157894.1\|1953223_1956721_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	97.1
WP_021538849.1\|1956781_1957429_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.5e-111	95.8
WP_061157895.1\|1957326_1958070_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	9.5e-147	95.5
1957870:1957884	attL	NA	NA	NA	NA
WP_061157896.1\|1958075_1958774_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	2.6e-130	97.4
WP_021543564.1\|1958773_1959115_-	hypothetical protein	A0A0P0ZDL9	Stx2-converting_phage	4.6e-40	66.4
WP_061157897.1\|1959107_1962347_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	97.1
WP_071590020.1\|1962393_1962654_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.6e-40	97.7
WP_001312914.1\|1962695_1963082_-\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.8e-64	100.0
WP_000097533.1\|1963081_1963786_-	hypothetical protein	A0A1B5FP82	Escherichia_phage	1.5e-117	96.2
WP_001209399.1\|1963845_1964190_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	4.2e-57	100.0
WP_001312916.1\|1964186_1964636_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	7.9e-64	80.5
WP_001147820.1\|1964632_1964971_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	1.6e-56	99.1
WP_040090484.1\|1964979_1965285_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	2.7e-39	99.0
WP_061157898.1\|1965241_1965484_-	hypothetical protein	A0A1B5FP98	Escherichia_phage	1.9e-24	100.0
WP_029400196.1\|1965535_1966741_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	3.5e-223	99.0
WP_001193631.1\|1966755_1967406_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.5e-119	100.0
WP_000466247.1\|1967383_1968625_-\|portal	phage portal protein	U5P411	Shigella_phage	5.9e-242	99.5
WP_000478567.1\|1968624_1968807_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	1.1e-24	96.7
WP_047088822.1\|1968818_1970576_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	99.3
WP_029400381.1\|1970575_1971058_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	1.9e-84	97.5
WP_001140099.1\|1971205_1971556_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.2e-64	98.3
WP_000671993.1\|1971563_1971764_-	hypothetical protein	NA	NA	NA	NA
WP_001114684.1\|1972008_1972494_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001228685.1\|1972734_1972920_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	6.4e-20	80.3
WP_000992100.1\|1973136_1973670_-	lysozyme	Q08J98	Stx2-converting_phage	3.6e-100	94.4
WP_021546095.1\|1973733_1974084_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.2e-37	95.2
WP_000839572.1\|1974088_1974304_-\|holin	holin	M1FN85	Enterobacteria_phage	5.3e-34	98.6
WP_021575731.1\|1975116_1975806_-	antitermination protein Q	I6PDF8	Cronobacter_phage	4.5e-58	50.2
WP_029402772.1\|1975802_1976168_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.1e-39	67.5
WP_061157899.1\|1976168_1977224_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.3e-88	48.1
WP_024168546.1\|1977225_1977504_-	hypothetical protein	I6PCV7	Cronobacter_phage	2.5e-12	50.0
WP_050542959.1\|1977732_1978029_-	hypothetical protein	NA	NA	NA	NA
WP_001013644.1\|1978268_1978481_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	4.3e-12	60.0
WP_061157900.1\|1978760_1979231_-	hypothetical protein	A0A076GCN9	Escherichia_phage	2.1e-35	77.2
WP_001224672.1\|1979396_1979579_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.0e-26	96.7
WP_029402725.1\|1980194_1980617_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	7.4e-64	92.0
WP_001262367.1\|1980657_1981728_-	hypothetical protein	A0A088CD36	Shigella_phage	3.8e-64	65.7
WP_000693883.1\|1981799_1982225_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000747951.1\|1982208_1982451_-	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_001397087.1\|1982842_1983181_+	peptidase S24-like family protein	H9C160	Pectobacterium_phage	2.5e-06	30.7
WP_000379575.1\|1983473_1983629_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171946.1\|1983788_1984007_+	hypothetical protein	NA	NA	NA	NA
WP_001331716.1\|1984010_1984175_-	hypothetical protein	NA	NA	NA	NA
WP_000854558.1\|1984574_1984763_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001070255.1\|1984759_1984951_+	DUF1482 family protein	NA	NA	NA	NA
WP_061157901.1\|1985044_1987486_+	exonuclease	V5UQJ3	Shigella_phage	1.0e-112	46.8
WP_000096344.1\|1987544_1987748_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533615.1\|1987747_1988773_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
WP_001311896.1\|1989008_1989806_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000060157.1\|1990143_1991406_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.6e-72	38.5
1996669:1996683	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2208585 : 2218030

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292786.1\|2208585_2209722_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
WP_001296230.1\|2209718_2211722_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001296231.1\|2211846_2212308_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|2212348_2212819_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|2212865_2213585_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2213581_2215267_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240408.1\|2215488_2216220_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
WP_001216963.1\|2216279_2216387_+	protein YohO	NA	NA	NA	NA
WP_000783109.1\|2216367_2217099_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569347.1\|2217103_2218030_-	glycine betaine ABC transporter ATP binding protein YehX	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	26.8

DBSCAN-SWA_5

2425782 : 2500667

Enterobacteria_phage(53.97%)

tRNA,lysis,terminase,portal,integrase,capsid,holin,head

attL 2455630:2455650|attR 2507507:2507527

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283598.1\|2425782_2426595_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289165.1\|2426594_2427608_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699128.1\|2427673_2428810_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	8.5e-22	29.3
WP_000615816.1\|2428908_2429904_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127789.1\|2429900_2431079_-	arabinose transporter	NA	NA	NA	NA
WP_000817178.1\|2431343_2432564_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683761.1\|2432722_2434729_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559761.1\|2434849_2435128_-	YfcL family protein	NA	NA	NA	NA
WP_001089235.1\|2435161_2435710_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447366.1\|2435709_2436519_-	TSUP family transporter	NA	NA	NA	NA
WP_001043795.1\|2436518_2437343_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_001296258.1\|2437346_2438432_-	chorismate synthase	A0A291AU41	Pandoravirus	7.0e-90	47.8
WP_001296259.1\|2438466_2439399_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730806.1\|2439564_2440116_+	endonuclease SmrB	NA	NA	NA	NA
WP_001527383.1\|2440175_2441000_-	DUF2544 domain-containing protein	NA	NA	NA	NA
WP_000054000.1\|2441001_2441529_-	fimbrial protein	NA	NA	NA	NA
WP_000819141.1\|2441525_2442005_-	fimbrial protein	NA	NA	NA	NA
WP_061157931.1\|2442001_2442493_-	fimbrial protein	NA	NA	NA	NA
WP_000499462.1\|2442509_2443262_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001296260.1\|2443281_2445930_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000032632.1\|2446010_2446577_-	fimbrial protein	NA	NA	NA	NA
WP_001195810.1\|2447135_2447621_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000425017.1\|2447823_2449968_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531977.1\|2449967_2451278_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_001296261.1\|2451458_2451743_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001296262.1\|2452114_2453455_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000776774.1\|2453516_2454272_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000368123.1\|2454565_2455498_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.6e-167	99.7
2455630:2455650	attL	NA	NA	NA	NA
WP_000958671.1\|2455809_2456967_+\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	5.7e-223	100.0
WP_061157932.1\|2458234_2461180_-	peptidase S74	A5VW57	Enterobacteria_phage	0.0e+00	99.4
WP_000532176.1\|2461315_2461567_+	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	6.6e-36	91.6
WP_000136767.1\|2461582_2462551_-	hypothetical protein	A9YX09	Burkholderia_phage	8.5e-71	48.6
WP_085956046.1\|2462728_2463097_+	hypothetical protein	I6S5X4	Salmonella_phage	3.4e-65	100.0
WP_061157933.1\|2463121_2464960_-	hypothetical protein	A0A192Y934	Salmonella_phage	1.9e-241	72.9
WP_061157934.1\|2464959_2466402_-	phage DNA ejection protein	A0A2H4FND5	Salmonella_phage	7.8e-137	62.5
WP_061157935.1\|2466411_2467107_-	hypothetical protein	G5DA80	Enterobacteria_phage	2.0e-90	98.9
WP_000627636.1\|2467109_2467565_-	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	2.3e-87	99.3
WP_021520320.1\|2467564_2468266_-	hypothetical protein	A0A2D1GLK3	Escherichia_phage	1.9e-120	99.6
WP_061157936.1\|2468265_2469684_-	hypothetical protein	A0A088CQ70	Enterobacteria_phage	1.2e-275	99.4
WP_024245630.1\|2469692_2470175_-	packaged DNA stabilization protein p27	Q716G8	Shigella_phage	9.3e-87	98.8
WP_000375639.1\|2470149_2470335_-	hypothetical protein	Q716G9	Shigella_phage	4.6e-26	98.4
WP_060504035.1\|2470377_2471649_-\|head	head protein	Q716H0	Shigella_phage	3.0e-241	99.8
WP_033803105.1\|2471660_2472545_-\|capsid	phage capsid scaffolding protein	Q716H1	Shigella_phage	4.0e-144	99.7
WP_061157937.1\|2472558_2474685_-\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.6
WP_061157938.1\|2474687_2476100_-\|terminase	PBSX family phage terminase large subunit	Q716H3	Shigella_phage	1.7e-277	99.6
WP_021566250.1\|2476096_2476537_-	hypothetical protein	C7U0W1	Enterobacteria_phage	3.5e-80	100.0
WP_000807788.1\|2476539_2476782_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
WP_000999686.1\|2476885_2477266_-	hypothetical protein	Q716B1	Shigella_phage	2.5e-66	98.4
WP_001028465.1\|2477555_2478077_-	DNA-binding protein	K7P7K9	Enterobacteria_phage	1.5e-93	100.0
WP_061157939.1\|2478278_2478716_-\|lysis	lysis protein	K7P7F7	Enterobacteria_phage	2.7e-69	96.6
WP_061157940.1\|2478712_2479189_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	6.4e-88	99.4
WP_000783734.1\|2479172_2479496_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_001385993.1\|2479979_2480468_-	phage antitermination Q family protein	M1FPN0	Enterobacteria_phage	3.5e-89	99.4
WP_000994516.1\|2480464_2480653_-	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
WP_061157941.1\|2480649_2481012_-	RusA family crossover junction endodeoxyribonuclease	K7PKF0	Enterobacteria_phage	2.5e-60	96.7
WP_061157942.1\|2481012_2481537_-	HNH endonuclease	K4F9R1	Cronobacter_phage	1.6e-31	42.9
WP_040080406.1\|2481533_2481824_-	DUF1364 domain-containing protein	Q9MCN9	Enterobacteria_phage	4.5e-52	99.0
WP_061157943.1\|2481823_2482546_-	DNA-binding protein	K7P6K2	Enterobacteria_phage	2.7e-130	99.2
WP_000566866.1\|2482538_2482709_-	protein ninF	K7PLU6	Enterobacteria_phage	2.5e-26	100.0
WP_001254222.1\|2482705_2482888_-	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
WP_061157944.1\|2482884_2483295_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	9.4e-72	99.3
WP_114137792.1\|2483266_2483623_-	hypothetical protein	K7PHN9	Enterobacterial_phage	2.3e-58	95.6
WP_000049638.1\|2483634_2483835_-	hypothetical protein	Q716C9	Shigella_phage	4.6e-32	100.0
WP_061157945.1\|2483831_2484158_-	hypothetical protein	Q716D0	Shigella_phage	6.1e-58	98.1
WP_061157946.1\|2484230_2485607_-	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	1.4e-252	99.6
WP_061157947.1\|2485603_2486491_-	replication protein	A5VW95	Enterobacteria_phage	1.2e-143	99.0
WP_001244625.1\|2486553_2486826_-	hypothetical protein	G9L679	Escherichia_phage	7.9e-43	98.9
WP_000251072.1\|2486848_2487142_-	hypothetical protein	A5VW96	Enterobacteria_phage	1.7e-46	100.0
WP_001194218.1\|2487261_2487477_-	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.4e-31	100.0
WP_061157948.1\|2487580_2488213_+	LexA family transcriptional regulator	K7P850	Enterobacteria_phage	3.0e-117	99.0
WP_061157949.1\|2488209_2488614_+	hypothetical protein	A0A088CQ79	Enterobacteria_phage	7.3e-69	98.5
WP_072146718.1\|2488968_2489331_+	antitermination protein	A4KWR0	Enterobacteria_phage	3.0e-53	100.0
WP_061157950.1\|2489340_2489973_+	hypothetical protein	NA	NA	NA	NA
WP_042017511.1\|2490019_2490310_+	hypothetical protein	K7PH98	Enterobacteria_phage	2.3e-32	75.8
WP_000604105.1\|2490938_2491247_+	hypothetical protein	K7PJM4	Enterobacteria_phage	2.5e-53	99.0
WP_000065842.1\|2491243_2492146_+	recombinase RecT	K7PKG9	Enterobacteria_phage	9.7e-146	87.5
WP_000041326.1\|2492129_2492612_+	siphovirus Gp157 family protein	K7P6T5	Enterobacteria_phage	3.5e-78	96.9
WP_000753561.1\|2492623_2492938_+	hypothetical protein	K7PLT4	Enterobacteria_phage	1.3e-49	98.1
WP_000773125.1\|2492954_2493236_+	hypothetical protein	K7P7M4	Enterobacteria_phage	1.9e-44	98.9
WP_001214452.1\|2493232_2493397_+	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	4.6e-22	98.1
WP_061157951.1\|2493393_2493942_+	hypothetical protein	A0A0P0ZBF8	Stx2-converting_phage	2.6e-45	58.2
WP_001673392.1\|2493938_2494172_+	hypothetical protein	E9NIE8	Enterobacter_phage	5.1e-06	41.0
WP_061157952.1\|2494799_2495399_+	DUF551 domain-containing protein	I6R0M4	Salmonella_phage	8.6e-82	88.7
WP_061157953.1\|2495398_2495683_+	DUF4752 family protein	A5VWB4	Enterobacteria_phage	6.1e-46	97.8
WP_000002106.1\|2495675_2495960_+	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	2.4e-50	100.0
WP_000545737.1\|2496032_2496200_+	hypothetical protein	A5VWB7	Enterobacteria_phage	9.8e-28	100.0
WP_001163428.1\|2496257_2496458_+	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
WP_000926944.1\|2496706_2497882_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.8e-145	63.0
WP_000287253.1\|2497861_2498812_-	sce7725 family protein	NA	NA	NA	NA
WP_000019149.1\|2498833_2499715_-	sce7726 family protein	NA	NA	NA	NA
WP_000783295.1\|2500394_2500667_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	3.2e-20	50.0
2507507:2507527	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2723162 : 2857010

146

Enterobacteria_phage(20.65%)

tail,tRNA,transposase,lysis,terminase,protease,portal,integrase,plate,capsid

attL 2785996:2786012|attR 2837903:2837919

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000083664.1\|2723162_2723900_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|2724031_2725366_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_001296304.1\|2725398_2726280_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189207.1\|2726382_2726970_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627804.1\|2727025_2727409_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	4.7e-33	70.9
WP_001262723.1\|2727713_2728403_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	2.1e-55	52.1
WP_061157956.1\|2728450_2729488_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|2729694_2730114_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_001296305.1\|2730182_2730881_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082935.1\|2730912_2733573_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_001312028.1\|2733686_2735042_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001467872.1\|2735087_2735411_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000852119.1\|2735407_2736706_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	2.4e-44	31.5
WP_001235102.1\|2742492_2745066_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040156.1\|2745195_2745927_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079111.1\|2745923_2746904_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|2747038_2747776_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|2748045_2748387_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|2748490_2748538_+	hypothetical protein	NA	NA	NA	NA
WP_000200140.1\|2748636_2749797_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225212.1\|2749839_2750961_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|2750971_2752042_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_001296308.1\|2752251_2752617_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212400.1\|2752763_2753282_+	YfiR family protein	NA	NA	NA	NA
WP_000969008.1\|2753271_2754498_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589791.1\|2754513_2754996_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|2755072_2755420_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264790.1\|2755461_2756229_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|2756259_2756808_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|2756826_2757075_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|2757211_2758573_-	signal recognition particle protein	NA	NA	NA	NA
WP_001189256.1\|2758664_2759531_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_010723175.1\|2759551_2760838_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|2760891_2761485_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059176.1\|2761607_2762486_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880939.1\|2762571_2764233_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|2764381_2764723_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117834.1\|2764784_2765075_-	RnfH family protein	NA	NA	NA	NA
WP_000600193.1\|2765064_2765541_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|2765672_2766155_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_012602456.1\|2766960_2768175_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
WP_001288444.1\|2768209_2769643_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.1e-106	50.1
WP_000355482.1\|2770049_2770823_+	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
WP_016243792.1\|2770892_2771477_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.0e-104	96.9
WP_071888735.1\|2771476_2774875_-	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
WP_061157957.1\|2774939_2775539_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	3.7e-109	97.0
WP_021538849.1\|2779166_2779814_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.5e-111	95.8
WP_032153133.1\|2779711_2780455_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.7e-146	95.1
WP_023307632.1\|2780460_2781159_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.1
WP_000447253.1\|2781168_2781498_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_001161009.1\|2784533_2784863_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001300035.1\|2784871_2785258_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
WP_000211129.1\|2785318_2786062_-\|tail	tail protein	A5LH35	Enterobacteria_phage	1.0e-132	99.6
2785996:2786012	attL	NA	NA	NA	NA
WP_001079398.1\|2786072_2786474_-\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000677102.1\|2786470_2787049_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	1.2e-101	99.5
WP_001283153.1\|2787060_2787336_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_001097050.1\|2787328_2787652_-	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_016243797.1\|2787738_2789766_-\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.8
WP_033560368.1\|2789710_2791219_-\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	1.7e-288	99.4
WP_001072975.1\|2791218_2791431_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_023307630.1\|2791427_2793530_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.9
WP_000373425.1\|2793529_2794024_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_001139675.1\|2794699_2794852_-	hypothetical protein	A0A291AWZ2	Escherichia_phage	1.2e-21	100.0
WP_016243800.1\|2794839_2795307_-\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	6.5e-77	98.7
WP_001135250.1\|2795303_2795801_-	lysozyme RrrD	A0A291AWW2	Escherichia_phage	4.5e-92	100.0
WP_000839596.1\|2795800_2796016_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_016243801.1\|2796083_2797136_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	6.1e-208	99.7
WP_000917724.1\|2797286_2797490_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000868396.1\|2797754_2798681_+	hypothetical protein	NA	NA	NA	NA
WP_001131905.1\|2798667_2799216_+	hypothetical protein	NA	NA	NA	NA
WP_001205460.1\|2799228_2799570_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
WP_061157959.1\|2799587_2800577_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.1e-193	99.1
WP_001061444.1\|2800584_2801394_-	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.8e-151	100.0
WP_000767113.1\|2801413_2801803_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_000210170.1\|2801799_2802126_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000066917.1\|2802122_2802776_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_077125183.1\|2802775_2803270_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.6e-86	98.8
WP_000104943.1\|2803266_2804208_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	4.9e-140	93.0
WP_071589348.1\|2804197_2804377_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.7e-15	70.4
WP_001560799.1\|2804552_2805104_-	protein YmfL	S5FXP0	Shigella_phage	5.8e-101	98.9
WP_000649477.1\|2805147_2805348_-	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
WP_000848748.1\|2805438_2806113_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_000917896.1\|2806285_2806582_+	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
WP_000135691.1\|2807182_2807545_+	hypothetical protein	Q8SBF8	Shigella_phage	1.2e-59	98.3
WP_061157961.1\|2807610_2808435_+	YfdQ family protein	U5P439	Shigella_phage	3.9e-149	99.3
WP_000008234.1\|2808562_2809087_+	5'-deoxynucleotidase	S5MW55	Escherichia_phage	5.4e-96	98.3
WP_001075212.1\|2809195_2810062_+	hypothetical protein	NA	NA	NA	NA
WP_001331174.1\|2810103_2810310_+	hypothetical protein	I6PBM8	Cronobacter_phage	6.9e-23	70.3
WP_061157962.1\|2810270_2811443_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	3.9e-147	67.3
WP_001145022.1\|2811456_2811840_-	hypothetical protein	NA	NA	NA	NA
WP_059251285.1\|2811829_2812645_-	hypothetical protein	NA	NA	NA	NA
WP_000993107.1\|2813786_2814764_+	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_000271888.1\|2814783_2816049_+	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_000772888.1\|2816074_2817523_+	NADP-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000625041.1\|2817536_2818817_+	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	3.8e-34	30.3
WP_021522614.1\|2819788_2820421_-	hypothetical protein	NA	NA	NA	NA
WP_001281696.1\|2820535_2820934_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
WP_000988473.1\|2820905_2821358_-	regulatory protein GemA	A4JWM5	Burkholderia_virus	1.6e-24	46.6
WP_000123379.1\|2821347_2821563_-	hypothetical protein	NA	NA	NA	NA
WP_000631814.1\|2821552_2821783_-	hypothetical protein	NA	NA	NA	NA
WP_000131939.1\|2821779_2822463_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	4.5e-34	36.9
WP_000197789.1\|2822459_2822765_-	hypothetical protein	NA	NA	NA	NA
WP_001774057.1\|2822774_2823047_-	hypothetical protein	NA	NA	NA	NA
WP_001774058.1\|2823334_2823865_-	hypothetical protein	L7P7T1	Pseudomonas_phage	6.9e-59	66.7
WP_000843445.1\|2823892_2824162_-	hypothetical protein	NA	NA	NA	NA
WP_000960680.1\|2824164_2825331_-	AAA family ATPase	A4JWN1	Burkholderia_virus	9.7e-122	59.7
WP_001774059.1\|2825341_2827111_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	4.8e-229	68.3
WP_000533819.1\|2827114_2828026_-	hypothetical protein	A4JWN3	Burkholderia_virus	2.0e-74	55.3
WP_000047758.1\|2828036_2828345_-	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	3.5e-23	55.9
WP_000123378.1\|2828397_2828586_-	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_000579778.1\|2828686_2829025_+	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	4.8e-05	34.4
WP_001573937.1\|2829141_2829906_-	DNA adenine methylase	A2I2Y7	Vibrio_virus	4.0e-100	64.4
WP_001069609.1\|2830097_2830313_-	hypothetical protein	NA	NA	NA	NA
WP_000972292.1\|2830311_2830716_+	hypothetical protein	NA	NA	NA	NA
WP_000194949.1\|2830691_2831435_-	hypothetical protein	NA	NA	NA	NA
WP_000793145.1\|2831565_2831916_+	membrane protein	A4JWP3	Burkholderia_virus	9.0e-23	53.9
WP_001104438.1\|2831918_2832656_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.9e-63	59.5
WP_000270138.1\|2832642_2833296_+	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	4.3e-10	31.9
WP_000175097.1\|2833292_2833619_+	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_000227704.1\|2833618_2833930_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.0e-30	60.6
WP_000533684.1\|2833932_2834475_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	4.9e-44	53.3
WP_000137893.1\|2834471_2835995_+	hypothetical protein	A4JWJ4	Burkholderia_virus	1.8e-184	62.5
WP_021512536.1\|2835994_2837491_+	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	6.1e-169	59.6
WP_000117556.1\|2837471_2838293_+\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
2837903:2837919	attR	NA	NA	NA	NA
WP_000135514.1\|2838295_2838754_+	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_001273074.1\|2838968_2840084_+	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_001286908.1\|2840098_2841052_+	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_000537457.1\|2841061_2841400_+	DUF2190 family protein	NA	NA	NA	NA
WP_000271668.1\|2841401_2841848_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_001101804.1\|2841847_2842312_+	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_012602372.1\|2842308_2842563_+	hypothetical protein	NA	NA	NA	NA
WP_000729834.1\|2842552_2843980_+\|tail	tail protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_000034294.1\|2843979_2844501_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_000110114.1\|2844503_2844785_+	hypothetical protein	NA	NA	NA	NA
WP_000084213.1\|2844882_2845218_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001202894.1\|2845141_2845300_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001529030.1\|2845375_2848588_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	5.8e-84	31.3
WP_000458387.1\|2848587_2849472_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_012602373.1\|2849468_2849684_+	membrane protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_001529032.1\|2849671_2850844_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	7.3e-85	47.1
WP_000148265.1\|2850840_2851437_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	5.4e-36	45.2
WP_000859116.1\|2851491_2851839_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.7e-34	61.5
WP_001529034.1\|2851829_2852933_+	hypothetical protein	Q6QI99	Burkholderia_phage	1.4e-106	55.0
WP_000138756.1\|2852925_2853504_+\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001529037.1\|2855433_2856048_+\|tail	tail assembly chaperone	Q9MCR5	Enterobacteria_phage	1.7e-61	61.5
WP_024189672.1\|2856536_2857010_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	2.1e-30	45.4

DBSCAN-SWA_7

2920051 : 2927191

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|2920051_2922613_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141293.1\|2922718_2923375_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_001272542.1\|2923425_2924223_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.0
WP_000847996.1\|2924388_2925297_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_000590411.1\|2925293_2926556_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279004.1\|2926552_2927191_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_8

3993828 : 4002142

Sodalis_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045133129.1\|3993828_3994290_+	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-61	72.2
WP_000909175.1\|3994283_3994961_+	hypothetical protein	Q2A0B2	Sodalis_phage	9.2e-56	71.6
WP_021527466.1\|3994960_3996280_+	phage DNA ejection protein	B6SCW4	Bacteriophage	1.2e-35	43.2
WP_016231879.1\|3996276_3998997_+	lytic transglycosylase domain-containing protein	A5VW64	Enterobacteria_phage	7.5e-149	60.9
WP_000594596.1\|3999147_3999846_+	hypothetical protein	NA	NA	NA	NA
WP_000072645.1\|4000818_4001301_+	ImmA/IrrE family metallo-endopeptidase	A0A142KB62	Gordonia_phage	1.5e-28	43.9
WP_000204054.1\|4001304_4001682_+	hypothetical protein	NA	NA	NA	NA
WP_000230718.1\|4001698_4002142_-	hypothetical protein	A0A1W6JPI4	Morganella_phage	4.8e-45	66.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP014490

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

975 : 109675

115

Salmonella_phage(90.0%)

terminase,tRNA,tail,integrase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077874335.1\|975_2091_-	DNA primase	J9Q720	Salmonella_phage	5.1e-205	91.6
WP_049076695.1\|2238_3579_-	AAA family ATPase	J9Q7G4	Salmonella_phage	2.6e-235	93.5
WP_061158042.1\|3622_4363_-	hypothetical protein	J9Q7R8	Salmonella_phage	4.9e-127	89.2
WP_061158043.1\|4543_6238_-	hypothetical protein	X2KLG0	Campylobacter_phage	4.1e-12	24.7
WP_160378290.1\|6289_6643_-	hypothetical protein	J9Q7G3	Salmonella_phage	1.4e-44	97.9
WP_000161228.1\|6648_7317_-	AAA family ATPase	J9Q7R7	Salmonella_phage	1.7e-110	91.4
WP_021512320.1\|7465_8239_-	hypothetical protein	J9Q7Y8	Salmonella_phage	6.2e-32	35.4
WP_061158044.1\|8223_8643_-	hypothetical protein	J9Q6E9	Salmonella_phage	4.8e-39	60.6
WP_000901561.1\|9008_9260_-	hypothetical protein	J9Q7R6	Salmonella_phage	1.1e-27	81.9
WP_000856757.1\|9261_9954_-	hypothetical protein	J9Q7Y7	Salmonella_phage	6.2e-124	94.3
WP_001717323.1\|9967_10291_-	hypothetical protein	J9Q6E7	Salmonella_phage	5.9e-45	89.7
WP_061158080.1\|10494_13161_-\|tail	phage tail protein	Q1MVL8	Enterobacteria_phage	1.8e-67	50.3
WP_061158046.1\|14616_19344_-	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	74.3
WP_021520111.1\|19361_19955_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	1.2e-99	90.9
WP_000526939.1\|19942_20740_-\|tail	tail protein	J9Q7R4	Salmonella_phage	1.3e-154	93.6
WP_000511445.1\|20732_21431_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.5e-133	96.6
WP_000442113.1\|21513_21849_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	3.0e-52	86.4
WP_000952686.1\|26456_26681_-	hypothetical protein	J9Q7F7	Salmonella_phage	8.8e-32	94.6
WP_000163861.1\|26806_27124_-	hypothetical protein	J9Q7R3	Salmonella_phage	8.6e-49	96.2
WP_048958837.1\|27179_27926_-	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	2.4e-121	92.7
WP_061158047.1\|28000_28384_-	hypothetical protein	J9Q6D8	Salmonella_phage	1.2e-57	82.7
WP_000523628.1\|28385_28859_-	hypothetical protein	J9Q711	Salmonella_phage	3.3e-76	90.4
WP_001027663.1\|28849_29194_-	hypothetical protein	J9Q7F6	Salmonella_phage	2.3e-55	95.6
WP_061158048.1\|29273_30107_-	hypothetical protein	J9Q7R2	Salmonella_phage	2.7e-142	92.4
WP_061158049.1\|30106_30541_-	hypothetical protein	J9Q7Y3	Salmonella_phage	9.7e-59	81.2
WP_061158050.1\|30585_31506_-	Ig domain-containing protein	J9Q6D6	Salmonella_phage	1.3e-132	83.9
WP_061158051.1\|31579_32455_-	hypothetical protein	J9Q710	Salmonella_phage	1.5e-154	93.8
WP_061158052.1\|32480_33368_-	hypothetical protein	J9Q7F4	Salmonella_phage	1.1e-130	87.9
WP_000422361.1\|33389_34964_-\|portal	phage portal protein	J9Q7R1	Salmonella_phage	2.4e-285	92.9
WP_001007299.1\|34990_36247_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	7.5e-245	96.4
WP_048958825.1\|36246_36879_-	hypothetical protein	J9Q6D4	Salmonella_phage	1.2e-89	83.3
WP_000176292.1\|37077_37344_-	hypothetical protein	J9Q757	Salmonella_phage	1.4e-36	88.6
WP_000129633.1\|37353_38244_-	hypothetical protein	J9Q7I6	Salmonella_phage	2.6e-167	98.6
WP_061158053.1\|38240_38906_-	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	2.8e-110	98.6
WP_000161986.1\|38902_39571_-	ParB N-terminal domain-containing protein	J9Q6L1	Salmonella_phage	5.6e-106	89.6
WP_000382660.1\|39570_40251_-	ParB N-terminal domain-containing protein	J9Q756	Salmonella_phage	2.7e-108	88.1
WP_061158054.1\|40333_41893_+	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.3e-278	92.9
WP_001291061.1\|41895_42174_+	hypothetical protein	J9Q7T9	Salmonella_phage	4.6e-22	58.2
WP_061158055.1\|42206_42806_+	hypothetical protein	NA	NA	NA	NA
WP_061158056.1\|43191_43992_-	hypothetical protein	A0A0M4QWT0	Salmonella_phage	6.0e-06	31.3
WP_023145147.1\|44094_44616_+	repressor of phase-1 flagellin	J9Q6L0	Salmonella_phage	1.2e-66	79.7
WP_029305755.1\|44911_45562_+	hypothetical protein	J9Q754	Salmonella_phage	1.1e-98	84.7
WP_000255469.1\|45610_45814_+	hypothetical protein	J9Q7I3	Salmonella_phage	5.9e-27	91.0
WP_000497809.1\|45834_46065_+	hypothetical protein	NA	NA	NA	NA
WP_001718033.1\|46446_46656_+	hypothetical protein	NA	NA	NA	NA
WP_052904755.1\|46682_47165_-	hypothetical protein	J9Q805	Salmonella_phage	3.9e-61	69.2
WP_061158057.1\|47515_47926_-	hypothetical protein	NA	NA	NA	NA
WP_061158058.1\|48007_48403_-	hypothetical protein	J9Q7I1	Salmonella_phage	2.0e-31	53.8
WP_000749407.1\|48529_48841_-	hypothetical protein	J9Q7T7	Salmonella_phage	5.7e-29	63.1
WP_061158059.1\|48994_49324_-	hypothetical protein	NA	NA	NA	NA
WP_162778790.1\|50889_51453_-	hypothetical protein	NA	NA	NA	NA
WP_000910476.1\|51611_51797_-	hypothetical protein	NA	NA	NA	NA
WP_061158081.1\|51833_52055_-	hypothetical protein	J9Q750	Salmonella_phage	4.6e-17	55.2
WP_001755492.1\|52294_54328_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	2.2e-44	24.1
WP_071888741.1\|54485_55586_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_000506720.1\|55623_56013_-	DNA repair protein	A0A077SK24	Escherichia_phage	8.6e-67	93.0
WP_000108704.1\|56814_57441_-	hypothetical protein	C6ZR26	Salmonella_phage	1.2e-06	68.4
WP_053882156.1\|57817_58024_-	hypothetical protein	NA	NA	NA	NA
WP_071888742.1\|58016_58721_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	1.2e-45	43.4
WP_024184642.1\|58720_58906_-	hypothetical protein	NA	NA	NA	NA
WP_061158062.1\|58910_59324_-	hypothetical protein	A0A1B5FPC7	Escherichia_phage	1.4e-14	50.0
WP_022644967.1\|59323_59866_-	hypothetical protein	J9Q748	Salmonella_phage	1.4e-86	87.4
WP_021533175.1\|59862_60504_-	HD domain-containing protein	J9Q7H7	Salmonella_phage	2.8e-99	87.3
WP_021520153.1\|60623_61004_-	hypothetical protein	J9Q801	Salmonella_phage	1.7e-27	67.4
WP_061158063.1\|61003_61708_-	hypothetical protein	J9Q6K2	Salmonella_phage	3.0e-86	75.5
WP_061158064.1\|61769_63455_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	92.5
WP_024171479.1\|63558_64173_-	hypothetical protein	A0A0E3GMH9	Enterobacteria_phage	3.6e-99	82.4
WP_001718087.1\|64512_65082_-	hypothetical protein	J9Q7H6	Salmonella_phage	1.4e-52	61.4
WP_000893470.1\|65221_65380_-	DUF3927 family protein	NA	NA	NA	NA
WP_000900261.1\|65379_65805_-	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	5.7e-56	78.7
WP_001103988.1\|65898_66087_-	hypothetical protein	J9Q800	Salmonella_phage	7.2e-11	53.2
WP_001718083.1\|66096_66591_-	hypothetical protein	J9Q6J9	Salmonella_phage	5.2e-24	55.4
WP_048959262.1\|66739_67330_-	ribonuclease HI	J9Q745	Salmonella_phage	1.8e-92	82.2
WP_048959260.1\|67911_68142_-	hypothetical protein	J9Q7H5	Salmonella_phage	5.3e-32	86.8
WP_052904282.1\|68327_68921_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	3.8e-98	86.3
WP_061158065.1\|69103_69913_-	hypothetical protein	J9Q7Z9	Salmonella_phage	2.4e-66	53.9
WP_021520508.1\|70073_70631_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	3.3e-88	83.6
WP_061158066.1\|70640_71060_-	hypothetical protein	J9Q743	Salmonella_phage	4.2e-51	71.2
WP_061158067.1\|71121_71766_-	AAA family ATPase	J9Q7H4	Salmonella_phage	1.0e-96	81.3
WP_162774977.1\|71765_72236_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	1.8e-79	89.7
WP_053900137.1\|72238_72652_-	hypothetical protein	J9Q7Z8	Salmonella_phage	5.6e-64	86.1
WP_053900136.1\|72653_73757_-	thymidylate synthase	J9Q6J6	Salmonella_phage	6.4e-192	87.2
WP_021512292.1\|73928_74798_-	hypothetical protein	J9Q742	Salmonella_phage	2.4e-133	81.0
WP_061158068.1\|74875_76018_-	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	2.6e-196	88.7
WP_000623683.1\|76123_78439_-	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	84.3
WP_000037962.1\|78512_79082_-	hypothetical protein	J9Q7Z7	Salmonella_phage	1.1e-91	86.8
WP_061158069.1\|79091_79835_-	hypothetical protein	J9Q6J5	Salmonella_phage	2.3e-52	47.6
WP_052904855.1\|79824_81741_-	AAA family ATPase	J9Q741	Salmonella_phage	5.8e-249	73.0
WP_000174803.1\|81970_83056_-	exonuclease	J9Q7S9	Salmonella_phage	8.0e-187	87.5
WP_000364573.1\|83310_83955_-	hypothetical protein	J9Q739	Salmonella_phage	2.9e-107	86.3
WP_001348683.1\|84156_85371_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	8.4e-76	45.4
WP_001229345.1\|85950_86163_-	hypothetical protein	J9Q7S8	Salmonella_phage	3.4e-33	94.3
WP_021512300.1\|86162_86498_-	hypothetical protein	J9Q7Z5	Salmonella_phage	1.5e-38	73.0
WP_001265407.1\|86713_86989_-	hypothetical protein	J9Q738	Salmonella_phage	4.0e-34	75.8
WP_000715581.1\|87560_88391_-	hypothetical protein	J9Q7Z4	Salmonella_phage	3.1e-122	94.9
WP_021533191.1\|88394_88595_-	hypothetical protein	J9Q6J0	Salmonella_phage	7.2e-09	59.1
WP_160378289.1\|88687_89716_-	recombinase	J9Q736	Salmonella_phage	1.1e-188	94.7
WP_061158071.1\|89763_90030_-	hypothetical protein	J9Q7G8	Salmonella_phage	4.4e-30	76.1
WP_001755518.1\|90029_90974_-	5'-3' exonuclease SAM fold family protein	J9Q7S6	Salmonella_phage	1.0e-161	88.9
WP_061158072.1\|91034_92063_-	hypothetical protein	J9Q7Z3	Salmonella_phage	1.4e-143	86.3
WP_024171475.1\|92180_92612_-	hypothetical protein	J9Q6I8	Salmonella_phage	4.4e-64	85.3
WP_106372450.1\|92766_93615_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_061158073.1\|93793_97312_-	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	94.5
WP_061158074.1\|97492_98728_-	AAA domain-containing protein	J9Q733	Salmonella_phage	4.0e-198	81.3
WP_061158075.1\|98823_100932_-	cobalamin biosynthesis protein CobT	J9Q7G6	Salmonella_phage	3.7e-228	66.6
WP_029305696.1\|101030_101243_-	hypothetical protein	NA	NA	NA	NA
WP_001282577.1\|101494_101881_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_048959201.1\|101875_102979_-\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	1.3e-27	33.8
WP_061158084.1\|103190_103436_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.3e-12	44.9
WP_052923433.1\|103610_104873_+	hypothetical protein	NA	NA	NA	NA
WP_061158076.1\|106387_106678_-	hypothetical protein	J9Q7S1	Salmonella_phage	3.4e-36	77.1
WP_061158077.1\|106823_107039_-	hypothetical protein	J9Q6I3	Salmonella_phage	5.1e-21	72.9
WP_047659377.1\|107035_108358_-	DNA ligase	J9Q7G5	Salmonella_phage	5.8e-240	91.1
WP_061158078.1\|108354_108612_-	hypothetical protein	J9Q7R9	Salmonella_phage	3.9e-15	57.8
WP_061158079.1\|108892_109675_-	hypothetical protein	J9Q7Z0	Salmonella_phage	5.4e-60	44.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP014489

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

49288 : 96381

Macacine_betaherpesvirus(27.27%)

integrase,transposase,protease

attL 56018:56032|attR 86770:86784

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082154.1\|49288_50260_+\|transposase	IS110-like element ISEc32 family transposase	Q75QL1	Wolbachia_phage	1.1e-25	32.1
WP_000092896.1\|50520_50733_-	hypothetical protein	NA	NA	NA	NA
WP_000817028.1\|52366_53338_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	8.8e-169	96.6
WP_001238646.1\|53337_54504_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.6e-228	99.7
56018:56032	attL	NA	NA	NA	NA
WP_000973517.1\|56025_58227_-	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_000750130.1\|58308_59586_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001015721.1\|59582_61325_-	aerobactin synthase IucC	NA	NA	NA	NA
WP_000011907.1\|61324_62272_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_000602863.1\|62272_63997_-	aerobactin synthase IucA	NA	NA	NA	NA
WP_000095526.1\|64132_65326_+	MFS transporter	NA	NA	NA	NA
WP_001318207.1\|65705_66086_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	1.9e-26	55.0
WP_000968139.1\|67328_68186_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_000983710.1\|69037_69865_-	iron/manganese ABC transporter ATP-binding protein SitB	A0A1M7XV31	Cedratvirus	3.6e-14	27.0
WP_001514243.1\|69864_70779_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_000361611.1\|73760_74738_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	4.6e-101	63.9
WP_001514245.1\|75022_75763_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
WP_001332052.1\|75883_76072_-	hypothetical protein	NA	NA	NA	NA
WP_000175738.1\|76445_77354_-	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
WP_000771475.1\|77416_78526_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_000280980.1\|78958_79912_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001312823.1\|81184_81343_-\|transposase	transposase	NA	NA	NA	NA
WP_085949156.1\|81526_82739_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6
WP_000928804.1\|84193_85381_+	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	1.0e-09	55.7
WP_000733252.1\|85377_87318_+	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	3.0e-35	39.0
86770:86784	attR	NA	NA	NA	NA
WP_001312828.1\|87321_88692_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_000974762.1\|89488_90430_-	hypothetical protein	NA	NA	NA	NA
WP_000450494.1\|92690_93884_-	hypothetical protein	NA	NA	NA	NA
WP_085974881.1\|95107_96381_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.1e-174	97.7

DBSCAN-SWA_2

123832 : 135421

Salmonella_phage(33.33%)

integrase,transposase

attL 119591:119606|attR 143562:143577

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
119591:119606	attL	NA	NA	NA	NA
WP_072224148.1\|123832_124408_-	3'-5' exonuclease	K7RFY5	Vibrio_phage	1.4e-28	40.1
WP_162778789.1\|124476_124680_-	hypothetical protein	NA	NA	NA	NA
WP_000969996.1\|124725_125007_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000079941.1\|125003_125273_-	hypothetical protein	NA	NA	NA	NA
WP_001138014.1\|125916_128883_-\|transposase	Tn3-like element TnAs1 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	100.0
WP_001161490.1\|128886_129447_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001323888.1\|129435_129603_+	hypothetical protein	A0A1B0V7I9	Salmonella_phage	2.3e-24	98.2
WP_000454193.1\|129622_129973_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|130175_131189_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001317507.1\|131344_131818_+	trimethoprim-resistant dihydrofolate reductase DfrA5	G3MBI7	Bacillus_virus	1.0e-13	27.7
WP_001067855.1\|131969_132674_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_061158039.1\|133258_134119_+	class A beta-lactamase TEM-156	Q1MVP3	Enterobacteria_phage	1.3e-160	99.7
WP_001387387.1\|134268_134670_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001067855.1\|134716_135421_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
143562:143577	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014491

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP014488

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP014490

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP014489

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection