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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011009 Peribacillus simplex strain SH-B26 plasmid pSHB26, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP011008 Peribacillus simplex strain SH-B26 chromosome, complete genome 4 crisprs csa3,DinG,RT,WYL,DEDDh,cas3 0 2 3 0

Results visualization

1. NZ_CP011009
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 20368 : 78592 56 Bacillus_phage(25.0%) transposase,integrase attL 47899:47913|attR 78766:78780
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP011008
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011008_1 319133-319230 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011008_2 823715-823819 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011008_3 1185450-1185568 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011008_4 2732277-2732360 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011008_4 4.1|2732304|30|NZ_CP011008|CRISPRCasFinder 2732304-2732333 30 NZ_CP019641 Planococcus sp. Y42 plasmid unnamed1, complete sequence 27978-28007 8 0.733
NZ_CP011008_1 1.1|319165|34|NZ_CP011008|CRISPRCasFinder 319165-319198 34 NC_007105 Bacillus cereus E33L plasmid pE33L54, complete sequence 49684-49717 9 0.735
NZ_CP011008_1 1.1|319165|34|NZ_CP011008|CRISPRCasFinder 319165-319198 34 NZ_CP009966 Bacillus cereus E33L plasmid pBCO_2, complete sequence 50253-50286 9 0.735
NZ_CP011008_1 1.1|319165|34|NZ_CP011008|CRISPRCasFinder 319165-319198 34 NC_008014 Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence 171959-171992 9 0.735
NZ_CP011008_1 1.1|319165|34|NZ_CP011008|CRISPRCasFinder 319165-319198 34 NC_020130 Lawsonia intracellularis N343 plasmid 3, complete sequence 171981-172014 9 0.735

1. spacer 4.1|2732304|30|NZ_CP011008|CRISPRCasFinder matches to NZ_CP019641 (Planococcus sp. Y42 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ctttgatttgaatgtgatggattctgagtt	CRISPR spacer
gctccaattgaatgtgatgaattctgagga	Protospacer
 .*. * ************.********  

2. spacer 1.1|319165|34|NZ_CP011008|CRISPRCasFinder matches to NC_007105 (Bacillus cereus E33L plasmid pE33L54, complete sequence) position: , mismatch: 9, identity: 0.735

acaagaggaaaagaaacacaaacaagaggaagaa	CRISPR spacer
acaagaggaaaagaaagacaaaaaagaaactact	Protospacer
**************** ***** ****..  .  

3. spacer 1.1|319165|34|NZ_CP011008|CRISPRCasFinder matches to NZ_CP009966 (Bacillus cereus E33L plasmid pBCO_2, complete sequence) position: , mismatch: 9, identity: 0.735

acaagaggaaaagaaacacaaacaagaggaagaa	CRISPR spacer
acaagaggaaaagaaagacaaaaaagaaactact	Protospacer
**************** ***** ****..  .  

4. spacer 1.1|319165|34|NZ_CP011008|CRISPRCasFinder matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.735

acaagaggaaaagaaacacaaacaagaggaagaa	CRISPR spacer
agatattaagaagaaacatagacaagaggaagaa	Protospacer
* * .  .*.********.*.*************

5. spacer 1.1|319165|34|NZ_CP011008|CRISPRCasFinder matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.735

acaagaggaaaagaaacacaaacaagaggaagaa	CRISPR spacer
agatattaagaagaaacatagacaagaggaagaa	Protospacer
* * .  .*.********.*.*************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 411662 : 419956 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 1733281 : 1778114 37 Bacillus_phage(25.0%) integrase,coat,tRNA,transposase attL 1764006:1764021|attR 1781648:1781663
DBSCAN-SWA_3 2942764 : 3009667 54 Bacillus_phage(50.0%) coat,tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage