CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014546	Pseudomonas azotoformans strain S4 chromosome, complete genome	2 crisprs	DEDDh,PD-DExK,csa3,cas3,DinG,WYL	0	4	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014546_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014546_1

1955415-1955786

Orphan

Consensus_repeat	Method
NNCNGCNGCCAANCCNGC	CRT

8 spacers

The CRISPR arrays of NZ_CP014546_1

>merge|NZ_CP014546|1|1955415-1955786|CRT
GGCTGCTGCAAAACCGGCTGCCAAGCCTGCGGCTAAAACCGCAGCGGCCAAACCGGCTGCGAAATCGGCCGCCAAGCCTCTGGTAAAAGCGGCCGCCAAACCTGCTGCCAAGGCTCCTGCCAAAGCAGCGGCTAAACCAGCCGCCAAGCCTGCGGCAAAAACCGCCGCTGCCAAACCGGCCGCCAAGCCTGCCGCTAAACCAGTTGCCGCTAAAGCTGCTGCCAAGCCAGCCGCCAAACCAGCAGCCAAGGCCGCCGCTAAACCAGCCGCCAAGCCTGCGGCCAAAACTGCAGCTGCAAAACCCGCTGCCAAGCCAGCCGCTGCGAAACCTGCAGCCAAGCCGGCCGCCGCGAAACCGGCTGCCAAGCCTGC

>NZ_CP014546|1|1|1955415-1955786|CRT
GGCTGCTGCAAAACCGGC	TGCCAAGCCTGCGGCTAAAAC
CGCAGCGGCCAAACCGGC	TGCGAAATCGGCCGCCAAGCCTCTGGTAAA
AGCGGCCGCCAAACCTGC	TGCCAAGGCTCCTGCCAAAGCAGCGGCTAA
ACCAGCCGCCAAGCCTGC	GGCAAAAACCGCCGCTGCCAA
ACCGGCCGCCAAGCCTGC	CGCTAAACCAGTTGCCGCTAAAGCTGCTGCCAA
GCCAGCCGCCAAACCAGC	AGCCAAGGCCGCCGCTAA
ACCAGCCGCCAAGCCTGC	GGCCAAAACTGCAGCTGCAAA
ACCCGCTGCCAAGCCAGC	CGCTGCGAAACCTGCAGCCAAGCCGGCCGCCGCGAA
ACCGGCTGCCAAGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014546.1\|WP_010213805.1\|1948775_1949564_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP014546.1\|WP_061434974.1\|1956594_1957530_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP014546.1\|WP_061434972.1\|1954569_1954992_+\|phasin-family-protein	unknown	unknown	gnl\|CDD\|377530
NZ_CP014546.1\|WP_033897736.1\|1951049_1952654_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP014546.1\|WP_033897737.1\|1952650_1953274_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP014546.1\|WP_061434975.1\|1957573_1960135_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP014546.1\|WP_061434979.1\|1961019_1961796_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_CP014546.1\|WP_061434971.1\|1949560_1949965_-\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|166942
NZ_CP014546.1\|WP_038844790.1\|1956049_1956577_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP014546.1\|WP_061434981.1\|1966786_1968466_-\|class-II-poly(R)-hydroxyalkanoic-acid-synthase	unknown	unknown	gnl\|CDD\|130898
NZ_CP014546.1\|WP_032890216.1\|1950615_1951008_-\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234598
NZ_CP014546.1\|WP_033897738.1\|1953273_1954044_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP014546.1\|WP_033897865.1\|1962822_1963485_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP014546.1\|WP_033897748.1\|1963498_1964119_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379407
NZ_CP014546.1\|WP_033897739.1\|1954188_1954464_+\|polyhydroxyalkanoic-acid-system-family-protein	unknown	unknown	gnl\|CDD\|131659
NZ_CP014546.1\|WP_003171180.1\|1949975_1950254_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|234764
NZ_CP014546.1\|WP_061434977.1\|1960257_1961013_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP014546.1\|WP_033897749.1\|1964146_1965829_-\|class-II-poly(R)-hydroxyalkanoic-acid-synthase	unknown	unknown	gnl\|CDD\|130898
NZ_CP014546.1\|WP_016979176.1\|1965918_1966764_-\|poly(3-hydroxyalkanoate)-depolymerase	unknown	unknown	gnl\|CDD\|131294
NZ_CP014546.1\|WP_003187881.1\|1950280_1950613_-\|phosphoribosyl-ATP-diphosphatase	unknown	unknown	gnl\|CDD\|179005

Protein	Function_ID	Function_description	E-value
NZ_CP014546.1\|WP_010213805.1\|1948775_1949564_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	1.1856e-114
NZ_CP014546.1\|WP_061434974.1\|1956594_1957530_-\|fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	7.58568e-09
NZ_CP014546.1\|WP_061434972.1\|1954569_1954992_+\|phasin-family-protein	gnl\|CDD\|377530	pfam05597, Phasin, Poly(hydroxyalcanoate) granule associated protein (phasin). Polyhydroxyalkanoates (PHAs) are storage polyesters synthesized by various bacteria as intracellular carbon and energy reserve material. PHAs are accumulated as water-insoluble inclusions within the cells. This family consists of the phasins PhaF and PhaI which act as a transcriptional regulator of PHA biosynthesis genes. PhaF has been proposed to repress expression of the phaC1 gene and the phaIF operon.	8.16649e-45
NZ_CP014546.1\|WP_033897736.1\|1951049_1952654_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP014546.1\|WP_033897737.1\|1952650_1953274_-\|SCP2-domain-containing-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	1.30787e-56
NZ_CP014546.1\|WP_061434975.1\|1957573_1960135_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP014546.1\|WP_061434979.1\|1961019_1961796_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	3.88059e-72
NZ_CP014546.1\|WP_061434971.1\|1949560_1949965_-\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|166942	PRK00404, tatB, Sec-independent protein translocase subunit TatB.	1.05889e-57
NZ_CP014546.1\|WP_038844790.1\|1956049_1956577_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.17696e-06
NZ_CP014546.1\|WP_061434981.1\|1966786_1968466_-\|class-II-poly(R)-hydroxyalkanoic-acid-synthase	gnl\|CDD\|130898	TIGR01839, Poly3-hydroxyalkanoate_polymerase_1, poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP014546.1\|WP_032890216.1\|1950615_1951008_-\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|234598	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed.	1.7032e-81
NZ_CP014546.1\|WP_033897738.1\|1953273_1954044_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	4.4696e-149
NZ_CP014546.1\|WP_033897865.1\|1962822_1963485_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.99776e-45
NZ_CP014546.1\|WP_033897748.1\|1963498_1964119_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379407	pfam13972, TetR, Bacterial transcriptional repressor. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The regulatory network in which TetR itself is involved is in being released in the presence of tetracycline, binding to the target operator, and repressing tetA transcription.	9.4352e-40
NZ_CP014546.1\|WP_033897739.1\|1954188_1954464_+\|polyhydroxyalkanoic-acid-system-family-protein	gnl\|CDD\|131659	TIGR02610, conserved_hypothetical_protein, putative polyhydroxyalkanoic acid system protein. All members of this family are encoded by genes polyhydroxyalkanoic acid (PHA) biosynthesis and utilization genes, including proteins at found at the surface of PHA granules. Examples so far are found in the Pseudomonales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.	9.41919e-38
NZ_CP014546.1\|WP_003171180.1\|1949975_1950254_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|234764	PRK00442, tatA, twin-arginine translocase TatA/TatE family subunit.	5.0025e-52
NZ_CP014546.1\|WP_061434977.1\|1960257_1961013_-\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	1.91471e-76
NZ_CP014546.1\|WP_033897749.1\|1964146_1965829_-\|class-II-poly(R)-hydroxyalkanoic-acid-synthase	gnl\|CDD\|130898	TIGR01839, Poly3-hydroxyalkanoate_polymerase_1, poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP014546.1\|WP_016979176.1\|1965918_1966764_-\|poly(3-hydroxyalkanoate)-depolymerase	gnl\|CDD\|131294	TIGR02240, Poly3-hydroxyalkanoate_depolymerase, poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. [Energy metabolism, Other].	0
NZ_CP014546.1\|WP_003187881.1\|1950280_1950613_-\|phosphoribosyl-ATP-diphosphatase	gnl\|CDD\|179005	PRK00400, hisE, phosphoribosyl-ATP diphosphatase.	3.27397e-53

>NZ_CP014546.1|WP_061434972.1|1954569_1954992_+|phasin-family-protein
MAKVILKKKIDAQTTTLSEVKSYARKIWLAGLGAYAKVGSEGSEYFKELVKTGQHVESKGKKVAVEQLEAANSQIDQVKSNVSSVKGLVEVQLDKVEKAFDTRVASALNRIGIASKHDVETLSAKLEELTTLLERVARKH
>NZ_CP014546.1|WP_033897739.1|1954188_1954464_+|polyhydroxyalkanoic-acid-system-family-protein
MARITVERAHSLGKEGARAKADKLAHKLKEQYGLEPSWSGDTLNLKRSGVKGTVLVTEDSLRIDVELGLLMSAMSGTIKSEIEKALDKALV
>NZ_CP014546.1|WP_033897738.1|1953273_1954044_-|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MTDQRKGSDAEPTTHFGFKNVPESQKAEKVAEVFHSVAAKYDLMNDVLSGGMHRLWKRFTIELSGVRPGNRVLDIAGGTGDLAAKFSKLVGPTGQVVLADINGSMLKVGRDRLLDKGVAGNIEFVQADAEKLPFPDNHFDCVTIAFGLRNVTHKEDAIRSMLRVLKPGGRLLVLEFSKPTNAIMSKVYDTYSFAFMPLMGKLITNDAESYRYLAESIRMHPDQETLKSMMVEAGFDRVTYHNMTSGIVALHRGIKP
>NZ_CP014546.1|WP_033897737.1|1952650_1953274_-|SCP2-domain-containing-protein
MLLAGFLASVEHGLNRVLRLDSTALARLAHLNGKVIAVDCRSPALQLFILPSDEGLMLATQWAAEADCTLRAPASSLLHLALSRNKTAILHSAEVELEGDSSVLMDLAAVLQDLELDWEYELSRWIGPVATQLISGHLRSRSRWYQQGFASLNQNLAEYLSEESRTLVGEREAQARFRELDKAKIDLERLEARFERLSRSLDPSDNA
>NZ_CP014546.1|WP_033897736.1|1951049_1952654_-|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MKLLAVRRLFRIQRVVIRYQLDDLLFALPLPWFLLAVRYVLPWRWFPRKKLELSRGARLRLALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMALIEEQLGKKISEVFSRFDVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQDLAWLFILARAAERFSADARLLHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGVQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFLERWMRERMSPKTVLGNLHSQMEQLPHLANMTRDLLERMSQPHAKDPAPPWKQRKDDWFLRLLGAAHLVGGVMLAIGGPLNQLGHWPAGIMVAVGVYLIVRR
>NZ_CP014546.1|WP_032890216.1|1950615_1951008_-|phosphoribosyl-AMP-cyclohydrolase
MKDWLDEIKWDSDGLVPAIAQDYKTGRVLMMAWMNREALSLTATEQRAIYWSRSRGKLWRKGEESGHVQTLHEMRIDCDADVVILKVEQIGDIACHTGRHSCFYRVFENGEWKTVEPVLKDPHAIYSAGH
>NZ_CP014546.1|WP_003187881.1|1950280_1950613_-|phosphoribosyl-ATP-diphosphatase
MSDTLNRVAQVLEDRKGADADSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISGDYSDVIYETADLWFHSLVMLAQLGQHPQAVLDELDRRFGLSGHAEKASRPSA
>NZ_CP014546.1|WP_003171180.1|1949975_1950254_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPAANPVPPAQPVHPQATQPITERRTFDVQAEKVEEPTRKDS
>NZ_CP014546.1|WP_061434971.1|1949560_1949965_-|Sec-independent-protein-translocase-subunit-TatB
MFGISFSELLLVGLVALLVLGPERLPGAARTAALWIGRLKRSFNAIKQEVEREIGADEIRRQLHNEHILSLEQEARKILSPVQEPAKPAEPVPENSIAPVAEAAPVAPTAPTEPAPTPTASPAPHDPTLPPRAP
>NZ_CP014546.1|WP_010213805.1|1948775_1949564_-|twin-arginine-translocase-subunit-TatC
MSADKPENDQHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLRQYLPAGATMIATDVSSPFLTPLKLTMMVSLFLAIPVILHQIWGFIAPGLYKHEKRIAVPLLVSSILLFYTGMAFAYFLVFPLIFKFFAAATPAGVEMMTDITSYLDFVMTLFFAFGVAFEIPVAVVLLVWIGVVNVAYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEIGILFSGLISKRGEHPDDQPDDDQPPATQP
>NZ_CP014546.1|WP_038844790.1|1956049_1956577_-|type-1-fimbrial-protein
MYLRSIPLLLAMTGGLASFSAQAATTGTLTFAGQVDAGTCNLAAGDENRTLTLPTIKISDLDATPSAGQLDFEVSADCESDIRNVIFLFTGTPSAGNGELFANTGGSKGTALLLAHRAPALSTIPANGTPDQRSRTVATSGNKAVLALAAAYHKTGEAITQGSLASAVTVSITYN
>NZ_CP014546.1|WP_061434974.1|1956594_1957530_-|fimbrial-protein
MKHSIKFVLTVLSLPLTAQAYCDRYPDSTLTLNLPATITVPDSLPDGSLITSQAFSGPSPAFVANCPVAVRRWYVGRYPDQRYPGSLIYRTEVPGIGVRISLMWADGANEAFFAIHTQPPQQVYGKIPSYTSATAHFYKMGPVTDGTIPAGNLWEHRWIHTPEVYRLDLGNAVRFVRPAATCDLAAGDVNRTITLPTIQASALKDVVYAGVHDFELTAQCSDAANVTFRFSGTPAPGNPLLFDNTGTAGGVDLWLYSRLNGVPQTISANEERTVAVSGDRAVLPLSAAYHKNGTVSQGSLASTATVNITYN
>NZ_CP014546.1|WP_061434975.1|1957573_1960135_-|fimbrial-biogenesis-outer-membrane-usher-protein
MSLNIHASPNSWLLARHRWTLMTRCLWLLSSAYAVGAQGAESVGFNPAFFPDGVGGRQVDIAKFSQGNVVLPGSYRTDVYLNGQWIGRETLTFVAVKGRDAAQMCLERDAVLRFGIDLEAPHNQPAEAGQAPIPAFAPCEDIATYLPGSTAQFDSGENRLTLQVPQIYLARKARGYVDPKHWDGGVDAAFVRYNANTFTTRTNGRSIDSHYLGLNTGLNLGDWHWRHNGSFSQTDAVAGYQSSSTYVQRELSPLRSQLMVGEIYTPGQLFDSVRLRGASLFSDDRMLPDSQTGFAPVVRGIAETNARVTVRQRGVLLDEVSVAPGPFVLNDLFATGYGGDLTVTVTEADGRQREFIVPFAANANLLRTGHSRYSLSAGLLDEIGLRHPPRLMQATYQHGLSNLLTGYTGAVAGDDYLSQLLGAAFNTPYGALSLDLTHSNAALPGHGARQGQSLQLRYSKNFTDTGTHFALGAYRYSTQGFLSVADAARVRDLAIDGNNLDNVSRLRDRMDISLNQGLANGTVYLTGSSQNYWNRSSGNLTFTTGYSGSWKGLHYTVSAQRTKDLLSERVDKQVELTLSLPLGSDARAPTLTTTAYRGDQSSGDRMNLGGTLGERSQFSYGVGGSRTQGSSNSVTADMKYQASHGVLSAGFGQSNAYRATSLGMTGGIVAHADGVIFAPELGDTLGIVQAPDAQGARINGNHGAQVGKRGYAVVPHLTPYRQNVVELDPKDLSVDVELKTAAQNVAPRAGSVVKLQFDTVSGQAILITALREDGSSLPFGSDVFDEDGASVGIVGQGGKAFVRVSRPQGQLKVKWGGNASCRLQYGVGPQRGPEGGNRLRHLDAGTCQAAANG
>NZ_CP014546.1|WP_061434977.1|1960257_1961013_-|molecular-chaperone
MNAVFASHLSARLIALAFALLSAAAQASVVISSTRIIYPQDDKEVTVRLESKNQAPVLIQVWLDSGDEHSTPDRATVPFIATPPIFRMEPGKQQVLRLAYTGDSLPTERESLFWFNLLEVPAHSQEANQLQLAFRSRIKLFFRPPNLPYGVDAAPGKLQWRGESTEHGQALEVYNPTPYHVTFEQVDVLDAQQRHARKPSASGAGNMVPPGGRTRFELPSLKKPPGSAATVEFQTLDDYGVRSTHSSPLST
>NZ_CP014546.1|WP_061434979.1|1961019_1961796_-|fimbria/pilus-periplasmic-chaperone
MKKLVCLALATWGIAGLLLHAFPAQAGVIIYGTRVIYPADQQEVVVRLENKGDRPALVQTWLDTGDIRSTPVTAQTPFTVSPPIFRIEPHQQQALRLRYSGEGAAADRESLYWLNVLEVPPLTAGAEQNNQIELAFRTRLRVFLRPQALPYSVGSAASKLQWKLVAHHQGYALQATNPTPYHVSLSSVVLVSEGRRFGKAANKEANDSLMMPAGDVKVFALPSLRERPNGALKVEFTAVSDFGARVRHSADLTPPVAG
>NZ_CP014546.1|WP_033897865.1|1962822_1963485_+|response-regulator-transcription-factor
MLLDDHEMVRQGIELGLRKETDLDVIGSFSTSRALLDALTQRPADVVVMDFTLGPSDIDGLSLIQMLSRRFKRCKVLVVSSHCTRARVTLALKAGSLGVLGKTQQLTELVVAIRTVAQGRIYLQRCMLSVLQEGESALRQMNIESKLETAMPLRLSGALTPKEQEVLRCFLDGMSVNSIAAKFSRSASTISTQKQSAYRKLGIRTDSELFMFTKQFGRPD
>NZ_CP014546.1|WP_033897748.1|1963498_1964119_-|TetR/AcrR-family-transcriptional-regulator
MKTRDRILECALQLFNQKGEPNVSTMEVANEMGISPGNLYYHFHGKEPLVLGLFERFQNELAPLLDPPADAQLEAEDYWLFLHLIVERMAHYRFLFQDLSNLAGRLPKLAKGIRNLLTALKRTLASLLARLKAAGQLVSDTQALGQLVEQITMTLLFSLDYQRILDREGEVQVVIYQIMMLVAPHLQSPARQATEQWALRYLDNPT
>NZ_CP014546.1|WP_033897749.1|1964146_1965829_-|class-II-poly(R)-hydroxyalkanoic-acid-synthase
MRERPVTNPAPTPAAFINAQNAITGLRGRDLLSTLRSVAAHGLRNPVHTARHAWALSGQLGRVLLGETVHEPNPNDGRFTDPTWKLNPLYRRSLQAYLSWQKQTRHWIDDSNLSADDRARAHFAFSLINDAVSPSNTLLNPLAIKELLNSGGNSVVRGVTNLFEDLLHNNGLPRQVSKHAFEVGKTVATTPGSVVFRNELLELIQYKPMSEKQYAKPLLIVPPQINKYYIFDLSPANSFVQYALKNGLQTFMVSWRNPDVRHREWGLSTYVAALEEALNVCRAITGAREVNLMGACAGGLTIAALQGHLQAKRQLRRISSASYLVSLLDSQIDSPATLFADEQTLEAAKRRSYQQGVLDGRDMAKVFAWMRPNDLIWNYWINNYLLGKEPPAFDILYWNNDNTRLPAALHGDLLDFFKHNPLSHPGGLEVCGTPIDLQKVTVDSFSVAGINDHITPWDAVYRSTQLLGGERRFVLSNSGHIQSILNPPGNPKANYVENPKLSSDPRAWYYDANHVEGSWWPQWLDWIQQRSGAQRETLTALGNQNYPPMEAAPGTYVRVR
>NZ_CP014546.1|WP_016979176.1|1965918_1966764_-|poly(3-hydroxyalkanoate)-depolymerase
MPQPFIFRTIDLDGQTIRTAVRPGKPHLTPLLIFNGIGANLELVFPFVQALDPDLEVIAFDVPGVGGSSTPNRPYRFPGLAKLTARMLDYLDYGQVNAVGVSWGGALAQQFAYDYPERCKKLILAATAAGAVMVPGKPKVLWLMASPRRYIQPSHVVRIAPMIYGGSFRRDSKLAAEHASKVRSAGKLGYYWQLFAGLGWTSIHWLHKIRQPTLVLAGDDDPLIPLINMRMLAWRIPNAQLHIIDDGHLFLITRAEAVAPIIMKFLEEERMRAVIHPRPAV
>NZ_CP014546.1|WP_061434981.1|1966786_1968466_-|class-II-poly(R)-hydroxyalkanoic-acid-synthase
MSNKNNDDLKRQASENTLGLNPIIALRKKDLLASAKMVLTQAIKQPLHSVKHVAHFGVELKNVMFGKSALVPENDDRRFQDPAWSQNPLYKRYLQTYLAWRKELHDWIGDSNLSEQDISRGHFVINLMTEAMAPTNSAANPAAVKRFFETGGKSLLDGLSHLAKDMVHNGGMPSQVNMGAFEVGKTLGTTEGAVVFRNDVLELIQYKPITEQVHERPLLVVPPQINKFYVFDLSPEKSLARFCLRNNQQTFIVSWRNPTKAQREWGLSTYIEALKEAVDVVTAITGSKDVNMLGACSGGITCTALLGHYAALGEKKVNALTLLVSVLDTTLDTQVALFVDEQTLEAAKRHSYQAGVLEGRDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNNDTTRLPAAFHGDLIELFKNNPLVRANALEVCGTPIDLKQVTADIYSLAGTNDHITPWQSCYKSAQLFGGKVEFVLSSSGHIQSILNPPGNPKARYQTSDSLTAKPLEWQENATKHTDSWWLHWQAWQAERAGKLKKAPTSLGNKTYAAAEAAPGTYVHER

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Crispr_ID: NZ_CP014546_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014546_2

6814520-6814681

Orphan

Consensus_repeat	Method
AGTTCGGAATCCGAACTCAG	CRT

3 spacers

The CRISPR arrays of NZ_CP014546_2

>merge|NZ_CP014546|2|6814520-6814681|CRT
AGTTCGGAATCCGAACTCAGCAAAACAACTCCCCGCTATCACTGAGTTCGGATTCCGAACTCAGTGAAAAAAGCCTCACAGAAACCATTCCCGCGCCCAGTTCGGAATCCGAACTCAGTGGAAAATCGCGGAGTACGCACTCAGTTCGGAATCCGAACTCAT

>NZ_CP014546|2|2|6814520-6814681|CRT
AGTTCGGAATCCGAACTCAG	CAAAACAACTCCCCGCTATCACTG
AGTTCGGATTCCGAACTCAG	TGAAAAAAGCCTCACAGAAACCATTCCCGCGCCC
AGTTCGGAATCCGAACTCAG	TGGAAAATCGCGGAGTACGCACTC
AGTTCGGAATCCGAACTCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014546.1\|WP_061449356.1\|6808532_6809228_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP014546.1\|WP_061449359.1\|6810923_6811160_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP014546.1\|WP_061449367.1\|6820137_6821133_+\|Abi-family-protein	unknown	unknown	gnl\|CDD\|227160
NZ_CP014546.1\|WP_061449355.1\|6807795_6808536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014546.1\|WP_061449506.1\|6811162_6811396_+\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP014546.1\|WP_061449366.1\|6818611_6819739_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379157
NZ_CP014546.1\|WP_061449358.1\|6810570_6810927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014546.1\|WP_061449372.1\|6826402_6826747_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014546.1\|WP_061449361.1\|6813145_6813850_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP014546.1\|WP_061449365.1\|6817440_6818580_+\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP014546.1\|WP_061449371.1\|6825864_6826347_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014546.1\|WP_061449357.1\|6809224_6810574_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP014546.1\|WP_061449354.1\|6806933_6807794_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP014546.1\|WP_061449360.1\|6811392_6813117_+\|ParB-family-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP014546.1\|WP_061449368.1\|6821269_6823174_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|223624
NZ_CP014546.1\|WP_061449363.1\|6816200_6816740_+\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP014546.1\|WP_061449369.1\|6823223_6825161_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350677
NZ_CP014546.1\|WP_033902228.1\|6806043_6806652_+\|ArsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225222
NZ_CP014546.1\|WP_061449364.1\|6816755_6817226_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|169261
NZ_CP014546.1\|WP_061449370.1\|6825276_6825792_+\|PilL-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|163460

Protein	Function_ID	Function_description	E-value
NZ_CP014546.1\|WP_061449356.1\|6808532_6809228_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	6.973e-09
NZ_CP014546.1\|WP_061449359.1\|6810923_6811160_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.19119e-05
NZ_CP014546.1\|WP_061449367.1\|6820137_6821133_+\|Abi-family-protein	gnl\|CDD\|227160	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms].	3.56782e-67
NZ_CP014546.1\|WP_061449365.1\|6817440_6818580_+\|PD-(D/E)XK-nuclease-family-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	7.05838e-33
NZ_CP014546.1\|WP_061449366.1\|6818611_6819739_+\|HNH-endonuclease	gnl\|CDD\|379157	pfam13391, HNH_2, HNH endonuclease.	7.25434e-16
NZ_CP014546.1\|WP_061449361.1\|6813145_6813850_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	8.81976e-54
NZ_CP014546.1\|WP_061449506.1\|6811162_6811396_+\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	2.27699e-07
NZ_CP014546.1\|WP_061449357.1\|6809224_6810574_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP014546.1\|WP_061449354.1\|6806933_6807794_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.19699e-39
NZ_CP014546.1\|WP_061449360.1\|6811392_6813117_+\|ParB-family-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	2.31378e-135
NZ_CP014546.1\|WP_061449368.1\|6821269_6823174_+\|type-I-DNA-topoisomerase	gnl\|CDD\|223624	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair].	4.34251e-172
NZ_CP014546.1\|WP_061449363.1\|6816200_6816740_+\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	7.47674e-75
NZ_CP014546.1\|WP_061449369.1\|6823223_6825161_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.46134e-42
NZ_CP014546.1\|WP_033902228.1\|6806043_6806652_+\|ArsR-family-transcriptional-regulator	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	7.59118e-11
NZ_CP014546.1\|WP_061449364.1\|6816755_6817226_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|169261	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional.	6.45981e-66
NZ_CP014546.1\|WP_061449370.1\|6825276_6825792_+\|PilL-N-terminal-domain-containing-protein	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	8.4356e-54

>NZ_CP014546.1|WP_061449361.1|6813145_6813850_+|DUF2857-domain-containing-protein
MSKTPINEAILSQVLHNMRNGQLRRCIEMGLEPELLAQLQQPSVLSLLLNTPVSWCTVTIDGDMVKKLLNGAQRSDEEVRMLERALRLGATTQMLQQFFGLSPQDVALQRLMMGITARRGRWREFSEEMDTQLWYRWTDLMKEHHVDLKDTSALLNVAMLVAEELNAPQKNGAEDDGHDSLSLAVIWNRIQNWIREGLYPPPNGGIWNPRKLRMLKTPHQRGRLKTSAEGDAEL
>NZ_CP014546.1|WP_061449360.1|6811392_6813117_+|ParB-family-protein
MKESLIQSMKEKIMQPAFESKAPVVARMSDPLVDTPMVLTLDETLPYDENPRTTRNPKYDEIKDSIRQRGLDAPPPVTRKPGEEKFRIRNGGNTRLAILNELYQETGEERFFKFHCLFRPWDADRGEIISLTGHLAENDLQGELLFIERAMGVERAKTLYEAESQESISLRELSRRLAADGYPVSASHLSRMQETIRHLLPSVPGLLYSGLGTDRIIKLLALRKSALLCWERNTQDNDKSLSFERVFQDVLTQFEGDAEEFLFPRFQDELIHQLKTPLDLGYEKILFDITQNQDQLRRATPVIETPAPTLDSTASKQAKKQHSSDDRVNSLEPETQNHSEQPIHAPPALLPLPTSQMSAEEVQLRLEGHVVTPVSTTAKVVQIKQRLAAIDGEELPDFNTNALVAIPVQAGGLHPISDLWYIEREIDTPELLRIHIAQLAREILNSVNAPGEAHAVKGGIGFAYSHADDEAEMSVTAQHTVTLLHSLSGSVAIALTAITQQPELQIGALADFEFAAGLGQLLLGQPLAKDQPPSHSGRLSDEALVKLFRVIRLSRRLIDLEITALQDPAYKIDN
>NZ_CP014546.1|WP_061449506.1|6811162_6811396_+|Arc-family-DNA-binding-protein
MSNPQPRKRDEKFVVRLPAGMRDQIAARASENVRSMNSEFVHRLQATTKLEADLDRALRTIDQLLAITGAERSGDGT
>NZ_CP014546.1|WP_061449359.1|6810923_6811160_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MIASQLRGGGENLRQLVVFAEANGWTVSRTRGGHIRFTKPGLGSIYTSSTSSDYRAGLNAKARLRRAERAMPQSIQEE
>NZ_CP014546.1|WP_061449358.1|6810570_6810927_+|hypothetical-protein
MNALTLPGITHWCLCCKTHHTHQQVRHCIPHPTPYEEEVEVLVCPYCGSCDVEELIDAPLHLTHPSLTQHYSVVFRVPGAREAARQFLYELGTKFPGDQTQIVAIQTGHALAKEGSEP
>NZ_CP014546.1|WP_061449357.1|6809224_6810574_+|replicative-DNA-helicase
MNHLDLSPPYSIEAEQGVLGGLLLDNNTWDLLADRLDSVDFFRHEHRLIFQTIATLASQAIPFDVVTVLDALEVPEEAGGLGYLGELAKNTPSVANIEHYASIVRNRSRLRQLMSLGYQCSRQATDPQANAADVQESIEQQLFALGGDKAASEFINIHQCLINVVEQIDEHFNGNVTVTGVPSGFDDLDAKTSGFQDADLIILGARPSMGKTALALNCVDAALQAKPKHTVQIYSLEMPAKALIYRLVAILGHLDLGKLLKGKLDDDDWPKLTSAVARINSYGERLVIDDASGMTPAALRAKSRRAARRFGHPSLILVDYLQMMNCPGQENRANEIGAISRALKALAKEMNCPVMALSQLNRELERRPNKRPINADLRDGGSIEQDADLIMFIYRDECYHPETEHKGVAEIIIGKARNGPTGTVRTAFIPHQTRFANLNANSAWQGAAV
>NZ_CP014546.1|WP_061449356.1|6808532_6809228_+|DUF2786-domain-containing-protein
MMDRQKVLDRVAKCFALANSSGASPNEAQTALRQARALMKQYNLEAIEIAAHSIGDVSVPTGTRRAPQDWLHHLALICGQAFDCKHLAYHSQVQGWSFKFLGQGISPELAAHAYSALHHQLVAARREHVTRQKRCLLKTKRRRGLLFTEGWLNAVNYKVAKFAGAMDDEADQAINTYLAHHHPTLKTSEIQSQKAKGHDANSLEAGWRQGQQVQLHRGVGKTRQAELEYVE
>NZ_CP014546.1|WP_061449355.1|6807795_6808536_+|hypothetical-protein
MAKTPITEAKTITAEVVLELSTYHNAKDLRSLQSKLTSTARELHGFSNSITLRGRIAGKLSFEQRQLLRDAAKLIESIGLNIEHAKEKRQRSEVAAKIRQKDRDTAAKKLVEYAYPLPSDTLGHKLEIIRLALVLNRAGCFQSFYSPVEFSLKYRNYVTDTPKVIARKRQKLFWEARVSALRADLKYEIQEHLAIQSEATTQERFLALQRQVETFYVQVSNDPYEIETLQLWSQALSTTEMLEADQ
>NZ_CP014546.1|WP_061449354.1|6806933_6807794_+|ParA-family-protein
MKTTAIADTKGGVGKTTVCANLGAFCADAGLRTLLIDLDPTQPSLSSYYPLLQEAEGGIYDMLASNVIDPARVISSTTISNLSLILSNDVNNQLNNLLLQAPDGRLRLHHLMPAFQDQFDLVLIDTQGAKSILVEMAALASDLVVSPLEPNMLAAREFNRGTLQMLDGLRAYERLGMKIPPVKIVFNSTDLTNDAKMIEQSVREVFKDSSTINVLESTVPAAVVFRNAASLGKPAHRLEYRQPAHRESPSALAVIKRLAIEVFPEWRARFELVTQEAVISLVKGAR
>NZ_CP014546.1|WP_033902228.1|6806043_6806652_+|ArsR-family-transcriptional-regulator
MSTKSDILQLLQREPLTVVQLCELLAVTRNAVIVQLKQLESEGLVRRSKIRPPNTVGKPPVIFEAAPGSEDVTSTAYQILLTQLLATLKDRYNVDELGDVLEQTGRQLAQRAGLANPVDFDSGLRAAMTAADALGASTEAVPQGGGVMVRNFTCPVGSVVREEQCVCRAMAAFFSEATGMPASEQCLREDRLICQYFIEHSA
>NZ_CP014546.1|WP_061449363.1|6816200_6816740_+|DUF3158-family-protein
MAQPTPNHGSLQQTAFQPLQQEAFQRLQQAASLKGLLKPFKGKGELAQFADLCRAQELELKALAQEVLNQARRYPFTLVAVRLTEQNTQAGTQFLRWQQVTDRRMGVGVWAEMMAAPKTPESLLQDLYAIELQRITLNMQMSLVHSIGKQAAECVKKMGQAEAVYDARLQQLSNPPQHI
>NZ_CP014546.1|WP_061449364.1|6816755_6817226_+|single-stranded-DNA-binding-protein
MGTPVQGWEGNIGSTPEFKEFPNGNKDPRRLLRINAYFDNSIPDGKGGYEDRGGFWASVEWWHKDAEHYAQLFQKGMRVMISGRAVMDRWKNDDGEFQALKIQANRIGMLPHRVTMVNLAPSQTQTSLQSNGPQPAPQPTSGSDDYPDPDELFDRG
>NZ_CP014546.1|WP_061449365.1|6817440_6818580_+|PD-(D/E)XK-nuclease-family-protein
MDDFLQISALLRARHQRPPGFNLFSVLRSSSDEVRLHSRFLAFLLDPKASHNQGTALLNLLLKRVGIQNFDSKSANVEVEYKNIDILVRNQSNQAVIIENKVYARDRDEQLWDYHQQMLGEGYRDIWTSYLTLDGAEPSEQSKKSLPVILLSYEAEIISWLKDCIPLVAREPGVRESIFQYIELLQKLTSSDQSEIYMSKLKEQILQGENIFVIADINHAFQSVLADLQFDIWERMTAYQTRQYPHLGNPVVSATKEAVSDFYKKAKNNKYIGLIFPFNFMQGGVYIEVNHRLYVGYCCDGGQYPVDRERLFDLCRDIAPRNRNTSTLYWRYSKIDVNLHAPSNEDLALLRDPEMRESIAISLIDDAHELWQRAHQKFA
>NZ_CP014546.1|WP_061449366.1|6818611_6819739_+|HNH-endonuclease
MAKGWSNEELLASVEAYRQMAEKHEAGVGYSKKQVYKELASRFERTPKAFEYRMQNISAVFDELGLPWIPGLKPAVNVGTAMKATLIQFIQGKTPEDDKWPEGLEDSSNWEKALAAVEQLGGSASRKQVEAWILARNPTYNSKNLADLYMMSVNSRARTGYSPNEKPRRTDQGNRYDRLFKVGKGTFELYDPAKHGIWEIYPDALSGSRFGVSVRQVTNPVEEALAVAQTAAEQADIFDPTDVADARKRVTADIIRRRGQPAFRKALLQAYGEACAITGCNLTAVLEAAHIHPYKGDHTNVVSNGLLLRTDIHTLFDLGLIAIESDTMLVRVSPKLEGTDYDKLNGSLLRQPEHHAHRVSSDALDWHWSQCGWCD
>NZ_CP014546.1|WP_061449367.1|6820137_6821133_+|Abi-family-protein
MQQLAPPKPFRTYAELVALLIGRGMSIADPARSERKLAQVGYYRLSGYWFPARNFVRDHQQNVVLCGVTNKPLRQNTFLPGTTFDDAFSLYLFDKKLRQLMLDAIERIEIHVRTVTAHEVGYHGPLAYLDASFIVPKQTQNWTDRNKKPRNTWLEWLERQKSLVARSQEDCIEWHKQNHKAIPFWVAIEAWDFGTLSKYYEILKGNHQNRIAQRLGVSNTRTLKLWLQEINTLRNRCAHHSRIWNQASSNALPELPAEPYFQALNLDHNAMTRLYGQIAIIWFLVQRIGPSSDWIRHVADVIDSKPNLPGCPFASLGLPSEDGFPRQLFGI
>NZ_CP014546.1|WP_061449368.1|6821269_6823174_+|type-I-DNA-topoisomerase
MKLLIIEAPGKLKKLKPMMKKLRPGEDWEVVASGGHIRDLPAKGQDDTLITTGVGKDLMPVYEVLDKSAKTVRALKAAAKQANEIYLATDPDREGESISWHIQQVLRLNTYKRITFSEITDKRVAEALANARQIDLNRVASQECRRVLDRLVGYLVTQELRRLMGKPTSAGRVQSPAVYLVVLREREIRNFQVINHFGVRLYFLNITEGTYWHADWQPVPDFANEEFPYVQDSSLAQRVANARNVVVQSCEDRQSERHPPAPFISSTLQQAASNALKWDPEKTMQVAQRLYEQGVITYHRTDNPNVPDEAMEGIRAMASALGVKTVDARRLFKAAEGAQEGHPAITPTDWMDRNAGENDDELDLYRLIWTRALASQLEAAVYDVRTAMLLGIGPQGKTLNFTAKGQTLRYPGWLKLLKADDTDDEQDPEASNPVPALSPKQILSVHSGELLQKKTQSPPRYTKASLIKEMERRGIGRPSTFASILKNITSKGLIEEKSRKLVPAPLGEETISKLEGFFSFLELDFTRELERDLDRIALGQDTYGAVVARLYQRLEGELSQQRGLPSVGLNSSFRTAQSTTLYTCTKCQQPLVRRQKKGDGSYDFWGCTGFKSNGCKVSYPTVNGKPNFDKSRGM
>NZ_CP014546.1|WP_061449369.1|6823223_6825161_+|DEAD/DEAH-box-helicase
MNRQPHLLGSVVFDGYDFGLQLQFLEGANKLLLERGGFYIRNSDHPMHRFWRVPKDKLLSGLDILFHRLMELADGRLQDSWQSFYQKIETAQSAPNRQVFTHGMRLRLAPLAQGGVLLSGDYHPGAVAVTRRMRGVFLGQSKSWRIEASAELVRSNLILELGIAEDQFEILDTVQELLTDGSIVPADTVTRISLGGPPQERNAPSVQEDVSTDVYLAAIPTIERTEITAEKIALELNSHSLLDHQPAGIQHLLQRTSALLADDMGLGKTRQAIIAAAIRAVDRPVLVITLSTLIINWKREIQMVYPQARIGMQVFDPSSQWIITNYERLGDYVLRAGHFEVMIIDEAHRLKEPTAAWTRHGFDIAAKVPNRYLLTGTPVLNRESELHTLLRLSGHPVGQLPLKAFCEQFAGSQDFRKNLRDAIGDWMLRRRKDVLPGLKGKQRQTLPVELPAEQRHEYDRIRCEDRPGLARLGALRQLLEQAKVRVVMELLSELDVEDKVILFCEFKGTVTTLHKLCEEAGYGCATVVGSDTVTKRQKAIDKFQSDPLTRIFAATTSAAGTGNNLTAANYVMFLGLPWTPGTQDQAEDRAYRNGQLRMVVVKIPLIENSIDQMLWQMLLDKRQLAQDLIEPDIAATNRANLAARL
>NZ_CP014546.1|WP_061449370.1|6825276_6825792_+|PilL-N-terminal-domain-containing-protein
MIRHFIALAFLALVAGCTAQTTDQTPTPEVDSHRSTEPLKPDLYADGAVAEKEPVVRYGRYTLVRTLPSADQRDLLAQIIDVSIPANMHPSVGDAMQYVLDRSGYSLCAMDADLASNLYSRPLPSSQYKLGPMTLRNTLQVLAGPAWQVRVDEVKREVCYVLRQGYQTPQA
>NZ_CP014546.1|WP_061449371.1|6825864_6826347_+|hypothetical-protein
MNTTDEVYQILRDARALARRYYHITGKPLGVTGEVAEYEAARVLDLKLQLARQAGYDATEVRNGATLRIQIKGRYFPNPKLRGGRVGSIDLKQEFDTVLLVLLDADYNAFQIYEADRSAVEALLTRPGSKARNERGSVGISQFKAISSLRWERACEEAES
>NZ_CP014546.1|WP_061449372.1|6826402_6826747_-|hypothetical-protein
MGTETHRLQEEIKALIARMGWSQRTLAGELWSLEYDTDFPQKEDVDRFAERLKKHLTRPTAAPEKLQHYLELIQQHDQFRQLDLIVPRLVPSAGFSPEFLEGMRKISVGLDDEG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014546_1	1.4\|1955568\|21\|NZ_CP014546\|CRT	1955568-1955588	21	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	113520-113540	1	0.952
NZ_CP014546_2	2.3\|6814638\|24\|NZ_CP014546\|CRT	6814638-6814661	24	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	63413-63436	4	0.833
NZ_CP014546_1	1.2\|1955472\|30\|NZ_CP014546\|CRT	1955472-1955501	30	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	133470-133499	5	0.833
NZ_CP014546_1	1.3\|1955520\|30\|NZ_CP014546\|CRT	1955520-1955549	30	MK875794	Microbacterium phage Chepli, complete genome	23476-23505	6	0.8
NZ_CP014546_1	1.3\|1955520\|30\|NZ_CP014546\|CRT	1955520-1955549	30	KP202970	Achromobacter phage 83-24, complete genome	13795-13824	8	0.733
NZ_CP014546_1	1.2\|1955472\|30\|NZ_CP014546\|CRT	1955472-1955501	30	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	117171-117200	10	0.667

1. spacer 1.4|1955568|21|NZ_CP014546|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 1, identity: 0.952

ggcaaaaaccgccgctgccaa	CRISPR spacer
ggcaaaagccgccgctgccaa	Protospacer
*******.*************

2. spacer 2.3|6814638|24|NZ_CP014546|CRT matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

tggaaaatcgcggagtacgcactc	CRISPR spacer
aacaaaatcgcggagaacgcactc	Protospacer
 . ************ ********

3. spacer 1.2|1955472|30|NZ_CP014546|CRT matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 5, identity: 0.833

tgcgaaatcggccgccaagcctctggtaaa	CRISPR spacer
cccgaaaacggccgccaagcatctggtaga	Protospacer
. ***** ************ *******.*

4. spacer 1.3|1955520|30|NZ_CP014546|CRT matches to MK875794 (Microbacterium phage Chepli, complete genome) position: , mismatch: 6, identity: 0.8

tgccaaggctcctgccaaagcagcggctaa	CRISPR spacer
agccaaggcacctgccaaggcagcacccaa	Protospacer
 ******** ********.*****. *.**

5. spacer 1.3|1955520|30|NZ_CP014546|CRT matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.733

tgccaaggctcctgccaaagcagcggctaa	CRISPR spacer
agccaacgcgcctgccaaagcagctggccc	Protospacer
 ***** ** ************** * .

6. spacer 1.2|1955472|30|NZ_CP014546|CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 10, identity: 0.667

tgcgaaatcggccgccaagcctctggtaaa	CRISPR spacer
gacgaaatctgccgccaagcctccttctcc	Protospacer
 .******* *************.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

19497 : 23283

uncultured_Caudovirales_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019334880.1\|19497_19926_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-63	87.3
WP_058825476.1\|19951_20665_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.4e-125	94.1
WP_038444687.1\|20711_21182_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	5.2e-74	91.0
WP_038444690.1\|21198_22482_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-211	90.6
WP_032901556.1\|22507_22864_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	6.1e-51	85.0
WP_019334875.1\|22860_23283_-	arsenate reductase ArsC	A0A2H4J437	uncultured_Caudovirales_phage	2.4e-54	76.4

DBSCAN-SWA_2

920577 : 971233

Tupanvirus(20.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033898063.1\|920577_921078_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_061434412.1\|921251_922139_+	acyltransferase	NA	NA	NA	NA
WP_033898061.1\|922135_922708_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_033898060.1\|922859_923486_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_061434414.1\|923482_924160_+	anti-sigma factor	NA	NA	NA	NA
WP_033898056.1\|924236_924695_+	anti-sigma factor	NA	NA	NA	NA
WP_061434416.1\|924810_925278_+	hypothetical protein	NA	NA	NA	NA
WP_061434418.1\|925402_925789_+	hypothetical protein	NA	NA	NA	NA
WP_016977809.1\|925838_927038_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.3e-12	30.7
WP_016977808.1\|927136_927994_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_033898053.1\|928003_928636_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_061434420.1\|928693_931711_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_010207083.1\|931707_932010_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_010207084.1\|932025_933276_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_061434422.1\|933298_934552_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	6.0e-101	53.0
WP_033898050.1\|934690_935419_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_010207092.1\|935509_936550_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_033898048.1\|936726_936924_+	hypothetical protein	NA	NA	NA	NA
WP_061449403.1\|937010_938111_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_033898047.1\|938391_939687_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_033898046.1\|940349_941120_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_033898045.1\|941130_942351_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_033898044.1\|942350_944306_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_016977794.1\|944409_946470_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_033898043.1\|946485_947016_-	hydrocarbon-binding protein	NA	NA	NA	NA
WP_061434424.1\|947094_948072_-	dipeptidase	NA	NA	NA	NA
WP_016977792.1\|948291_948693_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_061434426.1\|948696_949935_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_033898040.1\|949931_950228_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033898039.1\|950446_950863_+	DUF3010 family protein	NA	NA	NA	NA
WP_061434428.1\|950871_952062_-	hypothetical protein	NA	NA	NA	NA
WP_016977789.1\|952130_953075_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_038848891.1\|953268_954213_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033898035.1\|954286_955174_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_033898034.1\|955205_956171_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_061434430.1\|956184_956664_+	thioesterase family protein	NA	NA	NA	NA
WP_061434431.1\|956673_957834_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_010207120.1\|958081_958345_+	hypothetical protein	NA	NA	NA	NA
WP_005792167.1\|958495_959599_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_033898029.1\|960011_961388_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_133075420.1\|961406_961607_+	hypothetical protein	NA	NA	NA	NA
WP_033898028.1\|961803_962751_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016972877.1\|962817_963663_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_033898027.1\|963659_964838_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-25	36.5
WP_033898025.1\|964902_966894_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	4.1e-19	28.7
WP_033898023.1\|967216_967810_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_016977776.1\|967920_969393_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_033898022.1\|969529_971233_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	2.0e-51	30.3

DBSCAN-SWA_3

1478477 : 1482263

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019334880.1\|1478477_1478906_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-63	87.3
WP_058825476.1\|1478931_1479645_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.4e-125	94.1
WP_038444687.1\|1479691_1480162_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	5.2e-74	91.0
WP_038444690.1\|1480178_1481462_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-211	90.6
WP_032901556.1\|1481487_1481844_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	6.1e-51	85.0
WP_019334875.1\|1481840_1482263_-	arsenate reductase ArsC	A0A2H4J437	uncultured_Caudovirales_phage	2.4e-54	76.4

DBSCAN-SWA_4

1713673 : 1724218

Pseudomonas_phage(77.78%)

tail,integrase

attL 1702290:1702304|attR 1726187:1726201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1702290:1702304	attL	NA	NA	NA	NA
WP_061434824.1\|1713673_1714099_-	hypothetical protein	A0A1B0VMK5	Pseudomonas_phage	1.6e-61	87.1
WP_061434826.1\|1714142_1714745_-\|tail	tail assembly protein	A0A1B0VMK7	Pseudomonas_phage	2.1e-96	89.5
WP_061434828.1\|1714757_1715138_-	hypothetical protein	A0A1B0VML3	Pseudomonas_phage	4.9e-67	96.0
WP_156487786.1\|1716152_1716515_-	hypothetical protein	NA	NA	NA	NA
WP_061434832.1\|1716511_1718305_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	0.0e+00	92.2
WP_061434834.1\|1718291_1719173_-	toprim domain-containing protein	A0A1B0VML8	Pseudomonas_phage	1.6e-148	92.2
WP_061434836.1\|1719169_1719397_-	hypothetical protein	A0A1B0VRK9	Pseudomonas_phage	8.4e-30	85.3
WP_061434838.1\|1719389_1719677_-	hypothetical protein	A0A1B0VMJ4	Pseudomonas_phage	1.7e-40	88.9
WP_061434839.1\|1720573_1721248_-	KilA-N domain-containing protein	K7PGT4	Enterobacteria_phage	4.3e-29	56.8
WP_061434841.1\|1721244_1721550_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_061434843.1\|1721550_1721811_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_061434845.1\|1721907_1722807_-	hypothetical protein	NA	NA	NA	NA
WP_061434847.1\|1722982_1724218_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	1.0e-76	42.3
1726187:1726201	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2838741 : 2847126

Pseudomonas_phage(83.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061449423.1\|2838741_2841333_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.1e-29	22.4
WP_010212723.1\|2841543_2842278_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	1.7e-119	88.1
WP_016977943.1\|2842873_2843218_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	8.8e-47	82.8
WP_033899914.1\|2843239_2843752_+	hypothetical protein	NA	NA	NA	NA
WP_082461604.1\|2843745_2843931_+	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	9.2e-11	81.6
WP_033899916.1\|2843942_2844905_+	hypothetical protein	NA	NA	NA	NA
WP_033900004.1\|2845536_2846094_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	7.2e-75	74.9
WP_033899920.1\|2846625_2847126_+	CinA family protein	B5TK85	Pseudomonas_phage	2.6e-71	84.9

DBSCAN-SWA_6

2961050 : 2966004

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061435552.1\|2961050_2961800_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.8e-63	50.6
WP_016976880.1\|2961799_2962477_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-43	52.5
WP_016976881.1\|2962686_2963523_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
WP_016976882.1\|2963629_2964634_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
WP_002554837.1\|2964838_2965048_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_010212421.1\|2965437_2966004_+	dCTP deaminase	S5VM63	Pseudomonas_phage	8.1e-74	73.3

DBSCAN-SWA_7

5561936 : 5628644

uncultured_Caudovirales_phage(35.29%)

protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033896808.1\|5561936_5562761_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.7e-104	71.6
WP_016977555.1\|5563023_5563626_+	YIP1 family protein	NA	NA	NA	NA
WP_010209629.1\|5563754_5564249_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_061448896.1\|5564252_5565416_-	CoA transferase	NA	NA	NA	NA
WP_033896872.1\|5565573_5565966_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.9e-58	85.4
WP_033896810.1\|5565967_5566318_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.4e-39	68.3
WP_033896811.1\|5566317_5566596_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.5e-25	57.6
WP_061448897.1\|5566592_5566928_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	7.2e-46	79.3
WP_061448898.1\|5566924_5567926_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	7.2e-166	86.3
WP_061448899.1\|5568014_5569010_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_033896815.1\|5569057_5570452_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_038847883.1\|5570452_5571733_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.3e-97	53.2
WP_033896818.1\|5571749_5572124_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.3e-08	37.3
WP_061448900.1\|5572123_5573446_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	9.1e-76	38.3
WP_016975527.1\|5573456_5574080_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_061448901.1\|5574134_5576543_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.2e-88	51.7
WP_167351271.1\|5576517_5576727_-	hypothetical protein	NA	NA	NA	NA
WP_033896821.1\|5577039_5577720_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_016975530.1\|5577775_5578483_+	arginyltransferase	NA	NA	NA	NA
WP_002553999.1\|5578583_5578802_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_033896823.1\|5578928_5581199_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	9.6e-166	42.6
WP_005789091.1\|5581228_5581597_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	8.3e-11	42.0
WP_033896873.1\|5581821_5582100_+	cold shock domain-containing protein CspD	Q9AZD3	Lactococcus_phage	1.1e-12	59.1
WP_061449482.1\|5582178_5583435_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.9e-16	75.9
WP_061448902.1\|5583929_5586155_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_156487860.1\|5586447_5587545_+	serine hydrolase	NA	NA	NA	NA
WP_038847889.1\|5587607_5588054_+	NUDIX hydrolase	NA	NA	NA	NA
WP_033896831.1\|5588113_5589238_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_033896832.1\|5589234_5589858_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_033896833.1\|5589983_5591354_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.7e-109	47.1
WP_033896834.1\|5591438_5592605_+	cupin domain-containing protein	NA	NA	NA	NA
WP_033896835.1\|5592597_5593020_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061448904.1\|5593170_5593908_+	secretin	NA	NA	NA	NA
WP_003174717.1\|5594398_5595724_+	isocitrate lyase	NA	NA	NA	NA
WP_003219575.1\|5596225_5596639_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_016975544.1\|5596649_5597324_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_061449483.1\|5597397_5599182_+	NADH-quinone oxidoreductase subunit C/D	NA	NA	NA	NA
WP_016975546.1\|5599184_5599682_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_003174722.1\|5599678_5601034_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_033896838.1\|5601169_5603884_+	NADH-quinone oxidoreductase subunit NuoG	NA	NA	NA	NA
WP_017137518.1\|5603880_5604888_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_003174725.1\|5604899_5605448_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_016974946.1\|5605457_5605961_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_003174727.1\|5605963_5606272_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_033896839.1\|5606268_5608122_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_010209575.1\|5608162_5609695_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_033896841.1\|5609702_5611166_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_033896842.1\|5611404_5611755_+	toxin	NA	NA	NA	NA
WP_033896843.1\|5611744_5612059_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_033896845.1\|5612094_5612640_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_061448905.1\|5612649_5616213_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_061448906.1\|5616215_5617487_-	type VI secretion system protein TssL	NA	NA	NA	NA
WP_061448907.1\|5617502_5618834_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_061448908.1\|5618912_5620331_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_061448909.1\|5620349_5622311_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.8e-50	31.0
WP_033896851.1\|5622315_5623116_-	hypothetical protein	NA	NA	NA	NA
WP_061448910.1\|5623142_5625770_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	2.8e-84	30.9
WP_082781539.1\|5625762_5626803_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_061448911.1\|5626766_5628644_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_8

5709355 : 5779950

Tupanvirus(11.11%)

protease,coat,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033903216.1\|5709355_5710744_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.2e-43	30.7
WP_061448951.1\|5710762_5712463_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	6.4e-207	62.3
WP_016977438.1\|5712711_5713215_+	peptidyl-prolyl cis-trans isomerase	A0A1V0S9I2	Catovirus	1.9e-10	34.0
WP_033903218.1\|5713211_5713961_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_033903219.1\|5714053_5715583_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_061448952.1\|5715582_5716782_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_061448953.1\|5716797_5718246_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_033903222.1\|5718242_5718716_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_061448954.1\|5718887_5722559_-	translocation/assembly module TamB	NA	NA	NA	NA
WP_033903224.1\|5722558_5724286_-	outer membrane protein assembly factor	NA	NA	NA	NA
WP_016977422.1\|5725171_5725984_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_033903226.1\|5726079_5727411_+	phosphate ABC transporter substrate-binding/OmpA family protein	NA	NA	NA	NA
WP_016977420.1\|5727438_5728668_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_016974062.1\|5728819_5729755_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_016977418.1\|5729809_5730202_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_033903228.1\|5730218_5731118_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	1.1e-40	37.7
WP_061448955.1\|5731659_5733297_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.6e-32	25.3
WP_061448956.1\|5733447_5734611_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_033903232.1\|5736329_5737136_+	gamma-carboxygeranoyl-CoA hydratase	NA	NA	NA	NA
WP_061448957.1\|5737132_5739058_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
WP_033903234.1\|5739054_5739687_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	7.8e-25	36.8
WP_061448958.1\|5739819_5740170_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_033903237.1\|5740635_5741787_+	carboxypeptidase family protein	NA	NA	NA	NA
WP_033903238.1\|5741783_5742236_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033903239.1\|5742334_5743606_+	MFS transporter	NA	NA	NA	NA
WP_082462001.1\|5743507_5744047_-	cytochrome b	NA	NA	NA	NA
WP_061448959.1\|5744043_5745126_-	catalase family peroxidase	NA	NA	NA	NA
WP_016976147.1\|5745293_5745800_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_033903242.1\|5745796_5746534_+	anti-sigma factor	NA	NA	NA	NA
WP_051422275.1\|5746530_5747451_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_156487833.1\|5747501_5749796_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_033903246.1\|5749935_5750724_-	molecular chaperone	NA	NA	NA	NA
WP_033903247.1\|5750749_5751238_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_025999725.1\|5751240_5751783_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_061448960.1\|5751801_5752344_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_082781540.1\|5752337_5752862_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_061448962.1\|5753050_5754145_+	cell division protein ZapE	NA	NA	NA	NA
WP_061449488.1\|5754184_5755468_+	protein kinase	NA	NA	NA	NA
WP_016976136.1\|5755501_5756209_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_033903251.1\|5756308_5757166_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_061448963.1\|5757276_5758398_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_033903254.1\|5758394_5759222_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_016976132.1\|5759336_5759894_+	cytochrome b	NA	NA	NA	NA
WP_033903255.1\|5759883_5760768_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_061448964.1\|5760825_5762865_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_061448965.1\|5763076_5764207_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_033903258.1\|5764203_5765232_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_061448966.1\|5765565_5766570_+	hypothetical protein	NA	NA	NA	NA
WP_061448967.1\|5766633_5767104_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_033903261.1\|5767249_5769910_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_033903262.1\|5769911_5770685_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_033903264.1\|5770774_5771674_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_061448968.1\|5771793_5772999_+	MFS transporter	NA	NA	NA	NA
WP_082781541.1\|5772945_5773470_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_061448969.1\|5773569_5775444_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_003174819.1\|5775674_5775947_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	1.8e-18	59.6
WP_033903268.1\|5776096_5778493_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-219	51.6
WP_010209414.1\|5778666_5779950_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-138	59.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014546

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection