CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014544	Zhongshania aliphaticivorans strain SM2, complete genome	2 crisprs	WYL,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DEDDh,RT,csa3,DinG,cas3	0	24	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014544_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014544_1

1467402-1470249

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGCACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRT

47 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DEDDh

The CRISPR arrays of NZ_CP014544_1

>merge|NZ_CP014544|1|1467402-1470249|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGCACAGGCAGCTTAGAAAATATTTAAATTTCTCAGTTGCACCAGACACTGGTTCACTGCCGCACAGGCAGCTTAGAAATTCATCCCCTCCAAAGCCCAAGCCTCTAAGCAGTTCACTGCCGCACAGGCAGCTTAGAAAATCTCTTTGCACAATGCTGGCACCAGATCAGCGTTCACTGCCGCACAGGCAGCTTAGAAAAGTACCTAAGCGCCCAGGATAGGCACCTAGTCGTTCACTGCCGCACAGGCAGCTTAGAAAACCGGACGCAACAGCTTACCCGTTTAGAATGCGTTCACTGCCGCACAGGCAGCTTAGAAATATAAGTGCGCGCTTTGTTGCTGTGCTTGTTGGTTCACTGCCGCACAGGCAGCTTAGAAAACCTCGCACCGAATCGAGATGACCTTACCATCGTTCACTGCCGCACAGGCAGCTTAGAAAGAGAACAACAACAACGCTGCCGACCCGCAAGCGTTCACTGCCGCACAGGCAGCTTAGAAATAGTCGAAGCAGTACGGCTACTCGGTACGCTAGTTCACTGCCGCACAGGCAGCTTAGAAAAAGTGCGACCTCGCCGCATTGCGCCCAAGCCCGTTCACTGCCGCACAGGCAGCTTAGAAAACGCGCAAAGCAGCCAGCATCTTGCGAAAGCCGTTCACTGCCGCACAGGCAGCTTAGAAAACCCTTGCCAAGGAAGTGACCACGGCGGCTACGTTCACTGCCGCACAGGCAGCTTAGAAAAGCTGCCACCAATACACCAGCCGCTATTTTAAGTTCACTGCCGCACAGGCAGCTTAGAAAATAAAACGCTGGTGCATCCGAATAAAGAAAAGGTTCACTGCCGCACAGGCAGCTTAGAAATTAACGCCAGGCAGAGTTTTTACATTCTCCTTGTTCACTGCCGCACAGGCAGCTTAGAAAATTGGCAAGCGACAAGCGGAAACGCTGGTAAGGTTCACTGCCGCACAGGCAGCTTAGAAATACGCGTCAAGTGGGAAGGCATTTATTTTGGAGTTCACTGCCGCACAGGCAGCTTAGAAACTCGGCAGATCCGGTAGCAGTTATAAGGCCAGGTTCACTGCCGCACAGGCAGCTTAGAAATATACGAACTCGCCCGCGACGAAGACGGCTATGTTCACTGCCGCACAGGCAGCTTAGAAAAAAGCCTGCAAGCCTATCACCTCCGCCCGATAGTTCACTGCCGCACAGGCAGCTTAGAAAAAAGATATAACCGGCACCCTCGAAGACAAGCCGTTCACTGCCGCACAGGCAGCTTAGAAATTTTACTCGGTGTGATTGACTCACCACCATGCGTTCACTGCCGCACAGGCAGCTTAGAAAACACGGTAGGCGCTACTGCCGACACGCTAGCAGTTCACTGCCGCACAGGCAGCTTAGAAATGCAAAGTCTTGTGTGCCTGATCGTTTTGGCGGTTCACTGCCGCACAGGCAGCTTAGAAAGGTAAACAATACCGAGCGCCGAAACTACCAGAGTTCACTGCCGCACAGGCAGCTTAGAAATGCGCTAATTGCTGCGGGGCAAGAATTAGCGTGTTCACTGCCGCACAGGCAGCTTAGAAAGTTAGCGCTGGCCACGGCCTCAGTAATTCCCCGTTCACTGCCGCACAGGCAGCTTAGAAATTTATATCGCCGTTGTTGAAACCGTCGAATATGTTCACTGCCGCACAGGCAGCTTAGAAAATTTGCGCAATATTCCACGGCGACACCAAGGAGTTCACTGCCGCACAGGCAGCTTAGAAAAGTTTCAAAACATTGGACGCGCCCACCATAATGTTCACTGCCGCACAGGCAGCTTAGAAAGCTGCGAGCATTACCGGATGCGTGCGTGCGCAGTTCACTGCCGCACAGGCAGCTTAGAAAAAGCACTACACCAACATGAACGACACACTGTTGTTCACTGCCGCACAGGCAGCTTAGAAATTTGAATCGACGGTGAACGTATACGTCGATAAGTTCACTGCCGCACAGGCAGCTTAGAAAGAATGCTTGATACTGAGATTTATAATCTTAGTGTTCACTGCCGCACAGGCAGCTTAGAAAAAAGACAAGGACTTCATAACATGACAGAAAATGTTCACTGCCGCACAGGCAGCTTAGAAAATTAGCTGCTGGATCTCGCCAGTGGTGTAGCCGTTCACTGCCGCACAGGCAGCTTAGAAAGCTTGCATCATGCGGTTGCGCTCAGCTTCATAGTTCACTGCCGCACAGGCAGCTTAGAAAAAGAAAAGGGCATTGCTGAGATTATTACCACTGTTCACTGCCGCACAGGCAGCTTAGAAAATATTGCGCGCCCCACGAAACACCCTCGTTCAGTTCACTGCCGCACAGGCAGCTTAGAAAAAATCAAGCAGGCCGAACAATACGGCGTTGACGTTCACTGCCGCACAGGCAGCTTAGAAAGAATGCCTCAGCCTGCGCATAAAAGACATAGAGTTCACTGCCGCACAGGCAGCTTAGAAAACCCCCTCAACTTTCAATAAGCCTTGCTCAATGTTCACTGCCGCACAGGCAGCTTAGAAAATTGAAGTGCAGTATTTGGATGGCAACCAAGCGTTCACTGCCGCACAGGCAGCTTAGAAAGTGTGCTTGGGATTAAGAATAACCCACGAACCGTTCACTGCCGCACAGGCAGCTTAGAAAAGTTTATCGTATAAATCGTGGGATAAATTTAAGTTCACTGCCGCACAGGCAGCTTAGAAAAATAACAGAGCCAACCAGCCCACCAATGGAGGGTTCACTGCCGCACAGGCAGCTTAGAAAATTGATTCAGAGGGCCGTGGGCCGCTCCACATGTTCACTGCCGCACAGGCAGCTAAAAAT

>NZ_CP014544|1|1|1467402-1470189|PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTTAAATTTCTCAGTTGCACCAGACACTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTCATCCCCTCCAAAGCCCAAGCCTCTAAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATCTCTTTGCACAATGCTGGCACCAGATCAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTACCTAAGCGCCCAGGATAGGCACCTAGTC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCGGACGCAACAGCTTACCCGTTTAGAATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATAAGTGCGCGCTTTGTTGCTGTGCTTGTTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCTCGCACCGAATCGAGATGACCTTACCATC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAGAACAACAACAACGCTGCCGACCCGCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TAGTCGAAGCAGTACGGCTACTCGGTACGCTA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTGCGACCTCGCCGCATTGCGCCCAAGCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACGCGCAAAGCAGCCAGCATCTTGCGAAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCTTGCCAAGGAAGTGACCACGGCGGCTAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGCTGCCACCAATACACCAGCCGCTATTTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATAAAACGCTGGTGCATCCGAATAAAGAAAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTAACGCCAGGCAGAGTTTTTACATTCTCCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGGCAAGCGACAAGCGGAAACGCTGGTAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TACGCGTCAAGTGGGAAGGCATTTATTTTGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTCGGCAGATCCGGTAGCAGTTATAAGGCCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATACGAACTCGCCCGCGACGAAGACGGCTAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGCCTGCAAGCCTATCACCTCCGCCCGATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGATATAACCGGCACCCTCGAAGACAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTTACTCGGTGTGATTGACTCACCACCATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACACGGTAGGCGCTACTGCCGACACGCTAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCAAAGTCTTGTGTGCCTGATCGTTTTGGCG
GTTCACTGCCGCACAGGCAGCTTAGAAA	GGTAAACAATACCGAGCGCCGAAACTACCAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCGCTAATTGCTGCGGGGCAAGAATTAGCGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTTAGCGCTGGCCACGGCCTCAGTAATTCCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTATATCGCCGTTGTTGAAACCGTCGAATAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTGCGCAATATTCCACGGCGACACCAAGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTCAAAACATTGGACGCGCCCACCATAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTGCGAGCATTACCGGATGCGTGCGTGCGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGCACTACACCAACATGAACGACACACTGTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTGAATCGACGGTGAACGTATACGTCGATAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCTTGATACTGAGATTTATAATCTTAGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGACAAGGACTTCATAACATGACAGAAAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTAGCTGCTGGATCTCGCCAGTGGTGTAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTTGCATCATGCGGTTGCGCTCAGCTTCATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGAAAAGGGCATTGCTGAGATTATTACCACT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTGCGCGCCCCACGAAACACCCTCGTTCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAATCAAGCAGGCCGAACAATACGGCGTTGAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCCTCAGCCTGCGCATAAAAGACATAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCCCTCAACTTTCAATAAGCCTTGCTCAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGAAGTGCAGTATTTGGATGGCAACCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTGTGCTTGGGATTAAGAATAACCCACGAACC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTATCGTATAAATCGTGGGATAAATTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AATAACAGAGCCAACCAGCCCACCAATGGAGG
GTTCACTGCCGCACAGGCAGCTTAGAAA

>NZ_CP014544|1|1|1467402-1470249|CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTTAAATTTCTCAGTTGCACCAGACACTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTCATCCCCTCCAAAGCCCAAGCCTCTAAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATCTCTTTGCACAATGCTGGCACCAGATCAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTACCTAAGCGCCCAGGATAGGCACCTAGTC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCGGACGCAACAGCTTACCCGTTTAGAATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATAAGTGCGCGCTTTGTTGCTGTGCTTGTTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCTCGCACCGAATCGAGATGACCTTACCATC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAGAACAACAACAACGCTGCCGACCCGCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TAGTCGAAGCAGTACGGCTACTCGGTACGCTA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTGCGACCTCGCCGCATTGCGCCCAAGCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACGCGCAAAGCAGCCAGCATCTTGCGAAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCTTGCCAAGGAAGTGACCACGGCGGCTAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGCTGCCACCAATACACCAGCCGCTATTTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATAAAACGCTGGTGCATCCGAATAAAGAAAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTAACGCCAGGCAGAGTTTTTACATTCTCCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGGCAAGCGACAAGCGGAAACGCTGGTAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TACGCGTCAAGTGGGAAGGCATTTATTTTGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTCGGCAGATCCGGTAGCAGTTATAAGGCCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATACGAACTCGCCCGCGACGAAGACGGCTAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGCCTGCAAGCCTATCACCTCCGCCCGATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGATATAACCGGCACCCTCGAAGACAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTTACTCGGTGTGATTGACTCACCACCATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACACGGTAGGCGCTACTGCCGACACGCTAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCAAAGTCTTGTGTGCCTGATCGTTTTGGCG
GTTCACTGCCGCACAGGCAGCTTAGAAA	GGTAAACAATACCGAGCGCCGAAACTACCAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCGCTAATTGCTGCGGGGCAAGAATTAGCGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTTAGCGCTGGCCACGGCCTCAGTAATTCCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTATATCGCCGTTGTTGAAACCGTCGAATAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTGCGCAATATTCCACGGCGACACCAAGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTCAAAACATTGGACGCGCCCACCATAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTGCGAGCATTACCGGATGCGTGCGTGCGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGCACTACACCAACATGAACGACACACTGTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTGAATCGACGGTGAACGTATACGTCGATAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCTTGATACTGAGATTTATAATCTTAGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGACAAGGACTTCATAACATGACAGAAAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTAGCTGCTGGATCTCGCCAGTGGTGTAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTTGCATCATGCGGTTGCGCTCAGCTTCATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGAAAAGGGCATTGCTGAGATTATTACCACT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTGCGCGCCCCACGAAACACCCTCGTTCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAATCAAGCAGGCCGAACAATACGGCGTTGAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCCTCAGCCTGCGCATAAAAGACATAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCCCTCAACTTTCAATAAGCCTTGCTCAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGAAGTGCAGTATTTGGATGGCAACCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTGTGCTTGGGATTAAGAATAACCCACGAACC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTATCGTATAAATCGTGGGATAAATTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AATAACAGAGCCAACCAGCCCACCAATGGAGG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGATTCAGAGGGCCGTGGGCCGCTCCACAT
GTTCACTGCCGCACAGGCAGCTAAAAAT

>NZ_CP014544|1|1|1467402-1470249|CRT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTTAAATTTCTCAGTTGCACCAGACACTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTCATCCCCTCCAAAGCCCAAGCCTCTAAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATCTCTTTGCACAATGCTGGCACCAGATCAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTACCTAAGCGCCCAGGATAGGCACCTAGTC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCGGACGCAACAGCTTACCCGTTTAGAATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATAAGTGCGCGCTTTGTTGCTGTGCTTGTTG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCTCGCACCGAATCGAGATGACCTTACCATC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAGAACAACAACAACGCTGCCGACCCGCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TAGTCGAAGCAGTACGGCTACTCGGTACGCTA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTGCGACCTCGCCGCATTGCGCCCAAGCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACGCGCAAAGCAGCCAGCATCTTGCGAAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCTTGCCAAGGAAGTGACCACGGCGGCTAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGCTGCCACCAATACACCAGCCGCTATTTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATAAAACGCTGGTGCATCCGAATAAAGAAAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTAACGCCAGGCAGAGTTTTTACATTCTCCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGGCAAGCGACAAGCGGAAACGCTGGTAAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TACGCGTCAAGTGGGAAGGCATTTATTTTGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTCGGCAGATCCGGTAGCAGTTATAAGGCCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	TATACGAACTCGCCCGCGACGAAGACGGCTAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGCCTGCAAGCCTATCACCTCCGCCCGATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGATATAACCGGCACCCTCGAAGACAAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTTACTCGGTGTGATTGACTCACCACCATGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACACGGTAGGCGCTACTGCCGACACGCTAGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCAAAGTCTTGTGTGCCTGATCGTTTTGGCG
GTTCACTGCCGCACAGGCAGCTTAGAAA	GGTAAACAATACCGAGCGCCGAAACTACCAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	TGCGCTAATTGCTGCGGGGCAAGAATTAGCGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTTAGCGCTGGCCACGGCCTCAGTAATTCCCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTATATCGCCGTTGTTGAAACCGTCGAATAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTGCGCAATATTCCACGGCGACACCAAGGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTCAAAACATTGGACGCGCCCACCATAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTGCGAGCATTACCGGATGCGTGCGTGCGCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGCACTACACCAACATGAACGACACACTGTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	TTTGAATCGACGGTGAACGTATACGTCGATAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCTTGATACTGAGATTTATAATCTTAGT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAAGACAAGGACTTCATAACATGACAGAAAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTAGCTGCTGGATCTCGCCAGTGGTGTAGCC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GCTTGCATCATGCGGTTGCGCTCAGCTTCATA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGAAAAGGGCATTGCTGAGATTATTACCACT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATATTGCGCGCCCCACGAAACACCCTCGTTCA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAATCAAGCAGGCCGAACAATACGGCGTTGAC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GAATGCCTCAGCCTGCGCATAAAAGACATAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACCCCCTCAACTTTCAATAAGCCTTGCTCAAT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGAAGTGCAGTATTTGGATGGCAACCAAGC
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTGTGCTTGGGATTAAGAATAACCCACGAACC
GTTCACTGCCGCACAGGCAGCTTAGAAA	AGTTTATCGTATAAATCGTGGGATAAATTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	AATAACAGAGCCAACCAGCCCACCAATGGAGG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTGATTCAGAGGGCCGTGGGCCGCTCCACAT
GTTCACTGCCGCACAGGCAGCTAAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014544.1\|WP_008247106.1\|1464205_1465138_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP014544.1\|WP_008247107.1\|1465140_1466145_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP014544.1\|WP_008247108.1\|1466147_1466714_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|378224
NZ_CP014544.1\|WP_062383453.1\|1481101_1481923_-\|translesion-DNA-synthesis-associated-protein-ImuA	unknown	unknown	gnl\|CDD\|380271
NZ_CP014544.1\|WP_062383434.1\|1459486_1462816_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP014544.1\|WP_062383450.1\|1479617_1481102_-\|DNA-polymerase-Y-family-protein	unknown	unknown	gnl\|CDD\|176458
NZ_CP014544.1\|WP_081482596.1\|1482140_1483685_+\|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236123
NZ_CP014544.1\|WP_008247103.1\|1459207_1459405_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_CP014544.1\|WP_008247102.1\|1458836_1459205_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350326
NZ_CP014544.1\|WP_062383447.1\|1476514_1479613_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235553
NZ_CP014544.1\|WP_040802655.1\|1467065_1467254_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372700
NZ_CP014544.1\|WP_062383441.1\|1473834_1474296_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP014544.1\|WP_062383444.1\|1474366_1475284_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187611
NZ_CP014544.1\|WP_008247122.1\|1483797_1484976_+\|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223153
NZ_CP014544.1\|WP_008247100.1\|1456032_1457733_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227059
NZ_CP014544.1\|WP_008247101.1\|1457881_1458829_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP014544.1\|WP_008247113.1\|1472019_1473822_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
NZ_CP014544.1\|WP_062383437.1\|1470668_1471808_-\|epoxide-hydrolase	unknown	unknown	gnl\|CDD\|377658
NZ_CP014544.1\|WP_008247117.1\|1475306_1476488_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180843
NZ_CP014544.1\|WP_008247105.1\|1462838_1464209_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|378220

Protein	Function_ID	Function_description	E-value
NZ_CP014544.1\|WP_008247106.1\|1464205_1465138_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	6.65184e-123
NZ_CP014544.1\|WP_008247107.1\|1465140_1466145_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP014544.1\|WP_008247108.1\|1466147_1466714_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.18437e-50
NZ_CP014544.1\|WP_062383453.1\|1481101_1481923_-\|translesion-DNA-synthesis-associated-protein-ImuA	gnl\|CDD\|380271	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA. A three-gene cassette encoding ImuA, ImuB, and ImuC (""inducible mutagenesis"") is induced by DNA damage, is capable of DNA synthesis across DNA damage lesions, and consequently is associated with mutagenesis. This family, ImuA (previously misnamed SulA in Pseudomonas putida) shows some homology to SulA itself and to RecA. ImuB resembles Y-family polymerases but may be catalytically inactive. ImuC is a C-family polymerase, and catalytically active.	4.75496e-61
NZ_CP014544.1\|WP_062383434.1\|1459486_1462816_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP014544.1\|WP_062383450.1\|1479617_1481102_-\|DNA-polymerase-Y-family-protein	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	5.60094e-55
NZ_CP014544.1\|WP_081482596.1\|1482140_1483685_+\|hypothetical-protein	gnl\|CDD\|236123	PRK07883, PRK07883, DEDD exonuclease domain-containing protein.	3.19079e-54
NZ_CP014544.1\|WP_008247103.1\|1459207_1459405_-\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	6.68741e-10
NZ_CP014544.1\|WP_008247102.1\|1458836_1459205_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350326	cd18759, PIN_MtVapC3-like, uncharacterized subgroup of the VapC3-like nuclease subfamily of the PIN domain superfamily. The VapC3-like nuclease subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of various Mycobacterium tuberculosis VapC toxins including VapC3, VapC11, VapC15, VapC21, VapC25, VapC28, VapC29, VapC30, VapC32, VapC33, VapC37, and VapC39. It belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is a PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.09935e-06
NZ_CP014544.1\|WP_062383447.1\|1476514_1479613_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235553	PRK05672, dnaE2, error-prone DNA polymerase; Validated.	0
NZ_CP014544.1\|WP_040802655.1\|1467065_1467254_+\|hypothetical-protein	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	5.37542e-07
NZ_CP014544.1\|WP_062383441.1\|1473834_1474296_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	3.50248e-80
NZ_CP014544.1\|WP_062383444.1\|1474366_1475284_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187611	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs. Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	6.77077e-109
NZ_CP014544.1\|WP_008247122.1\|1483797_1484976_+\|alanine--glyoxylate-aminotransferase-family-protein	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	1.12886e-157
NZ_CP014544.1\|WP_008247100.1\|1456032_1457733_+\|hypothetical-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	8.29599e-16
NZ_CP014544.1\|WP_008247101.1\|1457881_1458829_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	6.68531e-177
NZ_CP014544.1\|WP_008247113.1\|1472019_1473822_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.83785e-145
NZ_CP014544.1\|WP_062383437.1\|1470668_1471808_-\|epoxide-hydrolase	gnl\|CDD\|377658	pfam06441, EHN, Epoxide hydrolase N-terminus. This family represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (EC:3.3.2.3) comprise a group of functionally related enzymes that catalyze the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarization of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites which arise during the biotransformation of foreign compounds. This family is often found in conjunction with pfam00561.	3.22256e-61
NZ_CP014544.1\|WP_008247117.1\|1475306_1476488_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180843	PRK07108, PRK07108, acetyl-CoA C-acyltransferase.	0
NZ_CP014544.1\|WP_008247105.1\|1462838_1464209_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.80069e-131

>NZ_CP014544.1|WP_040802655.1|1467065_1467254_+|hypothetical-protein
MMEVPEVVRRSGIAKAAVALGTTQSRLNDALKGEIEKCSVDRLAQMLAAVCYTVKLNICYAT
>NZ_CP014544.1|WP_008247108.1|1466147_1466714_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYFEIKAIPDPELLQSAVVGQLMQVLHGLLPAFCGRIGLSFPGYGQARTLGGILRLHGTSKDLDQLAFRLKALPIISSYALVTPIALVPSRLKGYARFQRLHVKGESDRRRMEARHKARGTWTPELAHAIAEKYQQAIVCPHVILRSQSTGQPRVPLFVEKLSVTGLVVGEFSAYGLSKTATVPWF
>NZ_CP014544.1|WP_008247107.1|1465140_1466145_+|type-I-F-CRISPR-associated-protein-Csy3
MTLTTATVLAFERNLDISDALFSQVDSAVSAAQFRPVKIQTKSVRGTISNRLKSAIANDPVKLDAEIEKPNLQTVDVASLDHDCDTLVVKWSCKVLPFTGKPSVCNDQAYQAKLQGVVQGYLQESGVAELSRRYATNIANSRWLWRNRLGAESIRLTVSLSPDGAGTIAVIEDAKQLSLTDFSQNNNAVSELATRIEQGLKGDAFVILYIKAEAKVGYGQEVYPSQELILDTGKEKSKVLYQKNDIAGMHSQKISNAIRTIDNWYPDAQFPVAAEPYGAVTTLGTAFRQPKQKQDFYSLFDNWVLKDSVPSVEQQHYVMAVLIRGGVFGASGKE
>NZ_CP014544.1|WP_008247106.1|1464205_1465138_+|type-I-F-CRISPR-associated-protein-Csy2
MSQISHYLLLDRIKVEKANAISSPLTYGFPAISGIMGAVHALNRKIVDAGFSVDLSGVLIACHAIHVHSYRPHRYADYSFNQSRNPIKKDGSTAAIIEEGKADLTFSLVIEVSASRSVARDIDDNQEKLEKQCKEWVLQQRMVGGSVHAVKQVRLLDGSEEKEIIKHLLPGFVLMQATQELLEITRELQQAKPEATALDALIEVSTLHHEPVETKVNKNGWQTRSVKTGKGWLVPIPVGFQSIAPQFAPGELANCRTNQYPSQYVESIYSLGKWVFPYRLPKQFSNSFWRYKQSNNLFLFSQSIQNQQGE
>NZ_CP014544.1|WP_008247105.1|1462838_1464209_+|type-I-F-CRISPR-associated-protein-Csy1
MDGITQQQVNNALETFLTTQYEKKAEADLKSLEKLDSENDIVKISAIQAKLAPLKAKYEFENWMQDAATRMAGQLRFGTHISKGIHPDSKGDNLNFRADGCLPEAVIGSQTLDSLALDANGNAAALPLAAFFETTVDESSGTKLRHLIQAEHPALECAFSAKPELSTEYARRFKSALDNVIEKPATYELNKQLLWPMANAISEDTYVTIVPLYPSALTSQWFSKINDLRFSEENKAGRDSRKKKPAEHLPYISIPEIAFLKLGGTKPQNISQLISKQGGRNYLLPSLPPVIASVKEFRLSQRTQTLFDSKLAYYCRNGFRDLYEVLITDKNVVDVREARKDALDLILAMLFELVEFIQQTYAPGWSKNYELPMTEKYWLDPYRSDLEDETDFAEGRVSSDWPEMIVDKFALWVNERLQKKFTKLASDIGDAEYKEWQQEIEHAIKASLRSGKETFV
>NZ_CP014544.1|WP_062383434.1|1459486_1462816_+|type-I-F-CRISPR-associated-helicase-Cas3
MMVTFVSQCDKKAIARSRRVLDAFADRIGDNTWQTVITQEGLLAVKKLLRKTATKNTAVSCHWIRSRARSELIWVVGNRNKFNYEGGVPVNTTLNDSYSAGDENRWIYGHAIQIVAVLAALLHDIGKATVGFQNKLFSPSDKFKGDPYRHEWISLRLFQAMIYGCNTDEQWLSRVMDFDSYIQGNPDWLKHLPNDDEGNPRRLDKLPPLAQLIAWLVVTHHRLPTYKPTRYARSQRYAEQLNDREWGKEMDMQEFFASLAPYEKWVKNEKADTDKDFWRLKEVVMTSKSWQRELKRWARKARDHAPLMALAQNTISDPLLMHLSRLCLMLADHNYSRLSDPNDKKRVKGDAQFANKLAANTNQEGGIKQPLDEHLLGVASFAKKVALDIPRLSRRLPVLPSKHKPFLAQTRKENYLWQNGAFALATKLQESAQRQGFFGVNMASTGRGKTLANARIMYALASSETGARFTIALGLRVLTLQTGRALRERLSLGEENLAILVGGAANRKLFELAQEEQDFTQSGSESIEPLLGMGEEVDGSLLPEEFQTLLEDSKTQKLLAAPVVSCTVDHIMQASECSRGGRYIAPVLRLLTSDLVLDEPDDFDQSDLPALARLVHMAGLYGSKVLLSSATLTPDMLAGLYQAYSAGRKVWNSHMGVPSAQPIPCAWFDEYHQQGTACADFDVFTSAHQQFVSKREAKLLAEPVRRKAEILPVELPPAKEGERLKIHMPALAKLMLDAAIELHGRHAEACPVTNKQVSIGLIRMANVEPIIHLVRNMYAQIELPSDVHIHLCCYHAKQLLILRDGLEQKLDRILSRSEPKSLFTHTEVQTALNRSSAGQHIFIVVASPVAEVGRDHDYDWAIVEPSSMRSLIQLAGRVWRHRPDKIATSPNLFVMDKNIHGLKGDAVCFTRPGFEQEPRFQLVSHSCSELITQAQLNRIDSIARIVHEEELQPEKRLADLEHAVMNGLLNNTDNFVSAFWRSGNGNHTSAHLQKISPFRDRDVPEDDYVCLPVPEDEHGYKFTFAEAAWKDLYNCPYQTSKIRFAEFSPCNPQVSPWLTVGLDDVVQELADKLGEHNLTKVARQYATVRLAQRDGVWLFHPWLGFWKAE
>NZ_CP014544.1|WP_008247103.1|1459207_1459405_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MRTTLNIDDALYAKAVELTGVHEKTALLKEGLKALIERESARRLAFLGGSEPDLQAAPRRQSAKI
>NZ_CP014544.1|WP_008247102.1|1458836_1459205_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MVLVDTSVWVDHLRQGDKVLADLLMLGQVCMHPMIIGELACGNLHKRGQLIALWQGLPSITEASHSEALYCLAENDLSGKGIGFVDLHLITATLLTPSTLIWTRDRRLKAAAQTLNTCFIAD
>NZ_CP014544.1|WP_008247101.1|1457881_1458829_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MEQLTDLKAILHSKRANIYYLEKCRVMQKDGRVLYLTEAKNENQYWNIPIANTTCLLLGTGTSLTQAAMRMLAQAGVMVGFCGGGGTPLLMATEIEWLSPQSEYRPTEYIQGWMQFWFDDAKRLLVARQLQRARIEFLQGVWARDKDLKSEGFNANDADIAQALEIFLSKTEKAAKVSELLQTEAQLTKQLYKIAANRSQYGDFVREREAVDTANAFLNHGNYLAYGLAATTLWVLGIPHGFAVMHGKTRRGALVFDIADLIKDAIILPWAFICAKEKATEQEFRQQCLQAFTQHKALDFMFEQVKSAALKGANQ
>NZ_CP014544.1|WP_008247100.1|1456032_1457733_+|hypothetical-protein
MREISEELLIQLAGDAAYKRGLDYYKQGHVGQLRLKGKTIIAEVEGSEIYQVTLKHTSKLFEGSCDCPASEGFDFCKHCVAAALVYRDQLQQDKTLQGSTAKDRLPSYLMTLDKQQLVAMLLEQLRNDRDALAQLTIKADIAAGKLNDKAIKKQITAATPLNKHLHSYPQVRNYFARLDAVLSGLETVMPDLPANKALALTDYAIARVGRALDTIDDSGGFRFDALERLASWHDRALSAAALPATDLAAYLFSLFMQPESEFYPSIPEEYENMLGEEGMQAFMTRLRVAWDALPPLQEKDWAAQGDYLHLLYPLKYEAISRNDSEAVIALYAKIACDFGDFLELSDLCLEYNMFDQALWWRKRAEAVKNKPYGATAALEDNQIALWLYHKDYAPVVELLWQRFAKWPSVEHYQKIIAIKGQKDDQKNRSKAIELAKQTVNNQNKFYGQIEAANTIAELHLHFQEFAQALDLAEAGKLHPNLLVKIAKANPQQAERVLPVLYRASRAFIESSNNDGYHRAIDTLKLAEKIAGKQYAHQVTQVLHGLLAEFKRKRNFCQWLREAFTGL
>NZ_CP014544.1|WP_062383437.1|1470668_1471808_-|epoxide-hydrolase
MSNLIKPFNVAIPQAQLDDLKARLANTRWPNEEPVDDWSQGAPLNAVKSLCEYWQNDYDWRRCEREINAHPQFTTEIDGLEIHFLHIRSPHENALPMIMTHGWPGSILEFMKVIEPLSNPTAHGGKAEDAFHLVIPSLPGYGFSGKPTSTGWGLERIAKAWITLMARLDYSEFVAQGGDWGSGVTSAIGHIHPPQCRAIHINMALAHPTEDDMASLSERDQKALADIKHYFDSDSGYAMIQKSRPQSMGYGLADSPAAQAAWIYEKFHGWTDNNGRPEDALTVDQMLDDISIYWLTNSGASSARLYWESFHSIFAEPLTIPCGVSIFPKELFRPARKWAERIYQNLIHWNELDKGGHFAAFEQPEIFINEVRSCFAKVR
>NZ_CP014544.1|WP_008247113.1|1472019_1473822_+|acyl-CoA-dehydrogenase
MAAPILCARDLQFMLYELFDAESLIKRPRYADHSVETFNAAIDTAQSIAEKYFVPIRKKVDEQQPTFDGKNVHMIPEIKVAVDAATQAGFVSSTADFELGGMQLPPLVASAANAYLTAAASTTTGYLALSNANANLIENHGSAEQIETWVKPIRIGRFAGTMAMTEPGAGSGLADLTTTAVPADDGTYRIRGSKIFISGGEHELNENIVHLVLARIKGAPAGVKGISLFIVPKILVNADGSLGERNDVALAGLFHKMGGRGQTSTALSFGENEGAVGYLVGEENRGLTYMFHMMNEARVMVGTGAACLALTGYQYSLDYARERPQGRLPSCKDPSSAPVSIIEHADVRRMLLAQKAYAEGAFALCMFGAQLADDKDTEQTEEARHAAHTLLDFLTPIIKTWPSEYGPKANDLAIQVLGGHGYINEHPVEMFYRDNRLNPIHEGTTGIQSLDLLGRKLPMNNMAGYRAFLALMQTTIDEARKGDLAPVAERLAAAIVTLETTTEHLLGAMMAKPIDLVMANSVKYLEVFGHVVIAWLWLRQGLVAQKGMAAKPHETDQQFYLGKLQAMKYFFNFELPLIEVWSKNLLDLDATFYEMNNNWF
>NZ_CP014544.1|WP_062383441.1|1473834_1474296_+|MaoC-family-dehydratase
MTTLIDKQAVQDYVGFEPAPTEWLSISQERINQFADCTMDQQFIHVDPVRAKETPFGTTIAHGFLSLSLLSYFSEQYSVIIKGFYMGINSGFDKVRFLAPVKVNSRIRAKAKILSIEETKPGSFRVNTQVTLEIEGEEKPALIAEWISIQMVA
>NZ_CP014544.1|WP_062383444.1|1474366_1475284_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSIRFDGKVAIVTGAGNGLGRSHALELAARGAKVVINDLGGARDGVGASSAAADGVVAEIQAAGGEAFSHGANVAIFSEVEDMVAQTMAKWGRVDILINNAGILRDKSFSKMSIDDFKLVMDVHVMGSVNCTKAVWEIMKQQAYGRIVMTTSSSGLYGNFGQANYGAAKMAVVGLMNTLAIEGAKYNINVNSLAPTAATRMTEDIMPAEILAMLVPEAVTAGALTLCHDNAPSRFILCAGGGGYAKSSIFETDGIYLSPEERSPEAVASQWDDICNTSNQAELESGFKQSEKFLLKAQAFMQGAK
>NZ_CP014544.1|WP_008247117.1|1475306_1476488_+|acetyl-CoA-C-acyltransferase
MKDAVIVSAARTPIGRAYRGAFNNLESPSLTAFAIKAAVERAGIDPNEIDDCIMGAAMQQGTQTMNFGRIAAMAAGLPTSVSGMTIDRQCASGLVAIATGAKQIVMDGAPMLLAGGCESISLVQNEHMNMHKLVDPAAIAHSPNIYMAMLDTAEIVAKRYNISREAQDEYALQSQQRTAAAQQAGKFDDEIVPVTASKLVMNKETGETSEESVTLVKDEGNRPSTNLEGLAGLKTVREGGFITGGNASQLSDGAAAVVMMDGTLASQRNIEPMGIYRGMAVAGCEPDEMGIGPVFAIPKLLKRAGLKMDDIGLWELNEAFAVQVIYCRDKLGIPNDRLNVNGGAISIGHPYGMSGARMVMHALIEGKRRGVKYVVVTMCVGGGMGAAGLFEVV
>NZ_CP014544.1|WP_062383447.1|1476514_1479613_-|DNA-polymerase-III-subunit-alpha
MPKIKPAPASYAELHCLSNFSFLRGASHPQELVATAAELGYSAIAITDECSLSGIVRAYRASKEHNIKLICGAEFILDEGIHLALLAPTRQAYTELCSLISRARLHSSKGNYQLNLSDVRRYSQHCLAIWINPDETESHASELKKYFNDRLWLGVSFHGQQQSEPYYFKRYQIARHHDINMIACGNVHMHCRQRKPLQDILSAIRLNTSVQALGSQVQANSERYLKPLSLLQRDYPADLLKESVAVAERCTFSLAELRYQYPNEVVPMNKNAGEFLREITLHGAQRRWPTGIPELVKSLLEKELSLIAELKYEHYFLTVYDIIQFARNQGILCQGRGSAANSAVCYCLFITEVDPSRGQLLFERFISRERDEPPDIDVDFEHERREEVIQYIYKKYGRQHAALAATIISYRRRSAVRDVGKALGLDDYLLQKLSGNMAWWDDKSTFIQRLEESQFETSSLPVQQFMSLLNEILGFPRHLSQHVGGFVITRDPIASLVPIENAAMPERTIIQWDKEDLEALGMMKIDVLALGMLSALRKSLSYISAAGGSVQQLSDIPAEDPATYQMLCTADSVGVFQIESRAQMTMLPRLQPRTFYDLVIQIAIVRPGPIQGGMVHPFLQRRQGLEKAEYENDAIARVLKRTLGVPVFQEQVIQLAMVAAGFSGGEADQLRRAMASWGKNGDLVKFRSKLVDGMRERGYSEDFAERLFSQMKGFGAYGFPESHSASFALLAYASAWLKCHYPAAFYCGLLNSQPMGFYSPSQLIQDASRHGIEVRPICINHSDWDHRLEGDSTTPALRLGLRLIKGLPKRSAELLCQIRQDALFHSIDDFCTRFTIAKQYWQQLVQADAFHCFNLHRYQSLWEISAWQAPAPLGNLHPAQNETLRLKPPVETEEVLSDYRHTGLSLRRHPLALLRAHKLFANCARAEDLKNIDNGRFIRISGLVSCRQRPGSASGVMFVTLEDETGNSNLIVWPAVQEHYKKALLQDQVLIVKGCVQKAAAGHATPVIHVVAFSIESHDHLMRVDAASHDFH
>NZ_CP014544.1|WP_062383450.1|1479617_1481102_-|DNA-polymerase-Y-family-protein
MLWLCLRLPALPLDALGAKHSAGMLALSHNNIIVMANVAAQQAGIAAGMSVASAMSLCSALELRPRDVQAEQQCLENIALWAYRFSGDVCLSPPNAVLLELSASLRLFKNLARLYRKFISAFRRRGLSVQLGIAHTPLAAELLSHQNISPAKLVSAAGQLHQEALQNALQALPIDLVPLVPKTLNTLREMGMHTLGNIQALPRAELERRFGKDIVTVLAKLQGEQSDIRPKFAPPDTFNAQRHFDGGLHSKQQLRFPVSALLSELEHYLRLRQCLNRDLQWEFHYLDGSKEAWSLDLSQRHFDRRSLIELVMLRLEPLSLQGAVETLSLRCEQFIGNEQHCEQLFDAANSNKQQEKAAQVLDKLKLRLGSQRCHQFSLQDAHLPELNWVLRDAHTATQTPSHNKLQAQATAPNATNLLRPNWLCHPPEAISETAEGLFWQGELHLLQGPERFDGQWWLQRQTRDYYIARHQHGALCWVFKDCLNRRWYLHGFFG
>NZ_CP014544.1|WP_062383453.1|1481101_1481923_-|translesion-DNA-synthesis-associated-protein-ImuA
MKNHSLNQLLDERKLWRGQQLRSSVAASDRLSTGFSTLDNALHTGGWPRSGSTELLGEYGIGELWFLLPALREHLADRPMAWLNPPYLPHAPALAAQGLAVDKQLLVRPKTLADQLWAAEELLRSGAYSAVLSWFNEPNLNDRQLRRLHIAALEGLCWHLHFRPASLAQQISPAPLRLNLSAAKQSLQINIIKQQGGHAGQQLQLARPAALYLQQSAAVTWPVYSSASVAKTQSHPQALRKISVLANTGIFASATRQDSVVNVIKTGSNEPSH
>NZ_CP014544.1|WP_081482596.1|1482140_1483685_+|hypothetical-protein
MFFLLGFFISRKSTGIHFAEWPVLGNLRFALVDLETTGGQAKQDHIMEAAVRVVGGDIDLEWQSLIDPLCSVPSFIQGLTGISNGMLRGKPRFSDVQEALWSYLDGAILVAHNARFDAGFLRANFARYGRDYQPRVLCTLKLARTLYPDWPKHGLEAICARIGFYSEVHHRAMADVDAMKAFLDYARIDKGEAVFNFEVGLLLGLPVLPPSIRQADIDAIPREPGVYRLLGEAGELLYLGSARSLQEQVLSHFENATGDSKAAKLLRRVDAVQWQMLAGELSAGLHLSVALRQEKPLLQRRAKALGKPCCVRFIMQDSGELQLRLRSGLPANIAQTGEAVGLFRERQHAKTRIRELAKEHQLCLRRLAVLVEGEICECGACVLTAAGTGESVAVASAADFAARVKAAFAEYLYTPWPFAEPVLIHEDNGAGFSECHLVYDWRHFGSFRWNAERGQLLELSGSAEPLDLAGARRICEQTQEFRYEHYRLLRAFQHDLTWQPLSEFTATIGGEYTA
>NZ_CP014544.1|WP_008247122.1|1483797_1484976_+|alanine--glyoxylate-aminotransferase-family-protein
MAISSFHPPLRTLMGPGPSDVHPRILEALGRPTLGHLDPLFVGMMDETKELLKYAFQTKNELTLPISAPGSAGMEACFVNLLEPGDKALVCVNGVFGNRMIENVTRCGATAIRLDFAWGTAVEPAAVEAALKEHGDIKVLAFVHAETSTGALSDAEALCGLAKQYGCLSIVDAVTSMGGVPLLVDKWQADAVYSGSQKCLSCTPGLSPVTFSPAAVAAIKARKHPVQSWFLDMNLILGYWGEGGKRAYHHTAPVNALYGLHESLVMLQEEGLENAWQRHATMHSALAAGLECLGVEFVVAAEQRLPQLNSVYIPQGVDDAATRQYLLANHSLEIGAGLGDLAGKVWRIGLMGYSAKPENIRLLLSGLAAAMLAQGYECDASAALAAADAVLA

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Crispr_ID: NZ_CP014544_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014544_2

3778249-3778347

Orphan

Consensus_repeat	Method
GCTGGACGGAAGACGGAAGACGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014544_2

>merge|NZ_CP014544|2|3778249-3778347|CRISPRCasFinder
GCTGAATGCTGGACGGAAGACGGAAGACGCTAGTACCGCGTAATGCTGGACGGGAGACGTTAACTCCGCGTAACGCTGGACGGGAGACGGAAGACGCTA

>NZ_CP014544|2|2|3778249-3778347|CRISPRCasFinder
GCTGAATGCTGGACGGAAGACGGAA	GACGCTAGTACCGCGTAATGCTGGACGGGAGACGTTAACTCCGCGTAAC
GCTGGACGGGAGACGGAAGACGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014544.1\|WP_062384352.1\|3777182_3778247_-\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|274092
NZ_CP014544.1\|WP_062384334.1\|3769216_3770068_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_CP014544.1\|WP_062384342.1\|3772575_3775041_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP014544.1\|WP_062384340.1\|3771148_3772378_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014544.1\|WP_062384348.1\|3776041_3776839_-\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_CP014544.1\|WP_050985244.1\|3786878_3787304_-\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
NZ_CP014544.1\|WP_008252407.1\|3781158_3781401_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014544.1\|WP_008252416.1\|3785400_3785871_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182942
NZ_CP014544.1\|WP_008252405.1\|3778488_3780384_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP014544.1\|WP_062384349.1\|3776950_3777154_-\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|340451
NZ_CP014544.1\|WP_008252409.1\|3782625_3783351_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014544.1\|WP_008252422.1\|3787489_3787951_-\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NZ_CP014544.1\|WP_008252418.1\|3785883_3786858_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NZ_CP014544.1\|WP_156474873.1\|3770261_3771152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014544.1\|WP_008252413.1\|3784167_3785367_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|236454
NZ_CP014544.1\|WP_081482722.1\|3781749_3782061_+\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|214752
NZ_CP014544.1\|WP_062384345.1\|3775122_3776019_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP014544.1\|WP_008252385.1\|3766296_3768096_-\|potassium-transporter	unknown	unknown	gnl\|CDD\|235131
NZ_CP014544.1\|WP_008252411.1\|3783355_3783973_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014544.1\|WP_062384331.1\|3768220_3769156_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655

Protein	Function_ID	Function_description	E-value
NZ_CP014544.1\|WP_062384352.1\|3777182_3778247_-\|glycine-oxidase-ThiO	gnl\|CDD\|274092	TIGR02352, Glycine_oxidase, glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.1649e-79
NZ_CP014544.1\|WP_062384334.1\|3769216_3770068_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	2.65645e-68
NZ_CP014544.1\|WP_062384342.1\|3772575_3775041_+\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	1.98532e-128
NZ_CP014544.1\|WP_062384348.1\|3776041_3776839_-\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	2.74304e-163
NZ_CP014544.1\|WP_050985244.1\|3786878_3787304_-\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	5.81188e-43
NZ_CP014544.1\|WP_008252416.1\|3785400_3785871_-\|hypothetical-protein	gnl\|CDD\|182942	PRK11068, PRK11068, phosphatidylglycerophosphatase A; Provisional.	2.95876e-61
NZ_CP014544.1\|WP_008252405.1\|3778488_3780384_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP014544.1\|WP_062384349.1\|3776950_3777154_-\|sulfur-carrier-protein-ThiS	gnl\|CDD\|340451	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS. ThiS, also termed Thiamine biosynthesis protein (ThiaminS), is a sulfur carrier protein involved in thiamin biosynthesis in prokaryotes. It has the beta-grasp ubiquitin-like (Ubl) fold with low sequence similarity to ubiquitin (Ub), and is activated in an ATP-dependent manner by sulfurtransferases, similar to the activation mechanism of Ub-activating enzyme E1. ThiS has common evolutionary origin with Ub-related protein modifiers in eukaryotes, a beta-grasp fold as Ub, and is closely related to proteins MoaD and Urm1.	1.22107e-18
NZ_CP014544.1\|WP_008252422.1\|3787489_3787951_-\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	1.55681e-86
NZ_CP014544.1\|WP_008252418.1\|3785883_3786858_-\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	9.69589e-113
NZ_CP014544.1\|WP_008252413.1\|3784167_3785367_-\|formate-dependent-phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|236454	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase.	0
NZ_CP014544.1\|WP_081482722.1\|3781749_3782061_+\|Ig-like-domain-containing-protein	gnl\|CDD\|214752	smart00635, BID_2, Bacterial Ig-like domain 2.	0.00668321
NZ_CP014544.1\|WP_062384345.1\|3775122_3776019_+\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	4.41715e-78
NZ_CP014544.1\|WP_008252385.1\|3766296_3768096_-\|potassium-transporter	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP014544.1\|WP_062384331.1\|3768220_3769156_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.04879e-70

>NZ_CP014544.1|WP_062384352.1|3777182_3778247_-|glycine-oxidase-ThiO
MNIAVAGAGLLGRLLAWKLLQQGHRVSLFDRGSRAGELSAARVAASMLAPYSEVASAERQVFDWGLMALRWWPEQIALLEQQTGQSISYGMDGSVVVAHDLDKSSVRHFEQQLQAKVPDHRDRVERIDRARLRDLEPELAGRYSSGLFLADEGYLDNGALLAALETAITKLGGKWFEYSEVVSLAPKRIILSNETLAFDWVVDSRGLGAKAQLPGLRGVRGEVLWVHAPEVNLQRPVRLMHPRYKLYISPRPNNRYVIGATEIESEAMQPVTVRSTLELMSALYSVHSGFAEANLLHAFAHCRPAMPDNLPVLNCEAGLLTVNGLYRHGYLLSPQLAENALAMLAEQTETSVAV
>NZ_CP014544.1|WP_062384349.1|3776950_3777154_-|sulfur-carrier-protein-ThiS
MISISVNNKRCECDANLALAELLPLWGFECEKIAIAINGDFVPRSQYGDLRLNSGDQVDVLAPVQGG
>NZ_CP014544.1|WP_062384348.1|3776041_3776839_-|thiazole-synthase
MKQNQDNWTLYGQSFHSRLLIGSALYPSPAVMREAITASGSEIITVSLRRQSPSEAGGEGFWQQLKSLNKTLLPNTAGCHSVKEAVTLAQMSRELFETDWLKLEVVGDDYNLQPDPLGTVEAAEQLIKLGFKVFPYCTDDLVVCQRLRDAGCQVLMPWGSPIGTGRGLMNPYNLQTIRERIPELPLIVDAGIGKPSHAVQALELGYDGILLNTAIAQAGNPVLMARAFRDAVAAGRQATLAGAMPERQTASPSTPTLGMPFWHQQ
>NZ_CP014544.1|WP_062384345.1|3775122_3776019_+|tyrosine-protein-phosphatase
MKIQSRGIALAISALLTFSTAPYLQAEIQTAPQTKIDDSSRLLALEGGSNFRDLGGYTTADNKTVRSGVLFRSGTMSSLTSADEKTLNKRHFKTVVDLRSQEELALYPNRWVSHNPSIRYINHSYSMTTMNLNSQKEAGKPIGIEGFYGNIAELYQPQMKMYFQELLNNNTPLVVNCSAGQDRTGFASALLLSALGVPRETIVQDYLLSTQYRRPAVERGDVDLEAAAKTNAFAKMMLHYNKKESKGPMPLITADGTPFINIAFAHIEQKYGSVENYLDQALAVDATEINKLKALYLQ
>NZ_CP014544.1|WP_062384342.1|3772575_3775041_+|TonB-dependent-receptor
MNSLGSKRLSYYLMTGLAAGMPSLGLAQNKLEMITVTAAPIRDSQQAAFDAKKFADNYVEIISADTIGRFPDQNLADSLGRLPGLAIERDQGQARYINLRGAPFRYTSIAFDGIDVPGAENGRIPRFDSIPSVITRTVEVNKAILPSMPGEAVAGFINIKTFSPFANEGWSFAADVGLGEQKLGGGDIEKYGLRTSWSNEKFGFVAFVSENSREQITDNREYDLERDATTGELIVNELDFRSYKVTREDSAYGGTLEYRGDDTVQRLFISTLYSEFIDKEQRNQFVFAFNTPATGVSGSNQDVSVQRLLEYGQYENSTESNTLGADFQLGEWLLETRVNGTDTEFKMNLPIPRSVGGSAVASYDLSDIEDPKLYLDRDLATINYASTIGIHYGQLLEINGLKIKADAERELSWLGKNMVLRTGVQRDTRDADGFVATPAIKSFPASVNIDDYNTGNPWDSNTTNTIGATYYNNIGLRGAWASTGGLGPVTPSEDGQIAINEEILAAYVMTTTELDWGNVVVGARIEQTDYRSKGSVNGDPISVSDDFINVLPSVHFNINLQEDLKLRVSATTGLNRPTYDEWRAAAKVDLINKEVTGGNPTLEAEEATGIDTSLEWYFAPASILSAGAFYRTVDNVIYADTSTIDGGVYLPSAAGESWTYKGSVNGDNGKMHGVELNFVGHASDLFNAAHGFGISANLTVLNSEFQALNGDRHDLPGTSDLLYNFSVFYEDYGLSTRINYQYRDEWISPIEDPNEKWGEQQRVDLSLSYELPFDFDGATMSVYANANNVSNETDVRYASNGTINQSESYGRRYLLGVRLHF
>NZ_CP014544.1|WP_062384340.1|3771148_3772378_+|hypothetical-protein
MKSLGLSKPKWLIKLAVVAAASIFLIAFNHWLSLNYLSRSLAQQLRETLPNKIIEAGINESFHDSLNDYLVKRLNHDFAQLHVNSAFSAVQQCQAQVLRIHNKTYANSANTARIISLHWPINDHIQELKLGLACQWQWPKLIASQLFLSLLGLLMWTAVAPPLSPRRKQLLRALTEQGVNRRQAEQLSSKADDYSPSQEQALTLFLRSNYPYPSHYLAHLNTGGFKHSSPSALAWLEFALRQRPKDIADAIAIAESPAELSLCPATSTVIVHGYALKMSSTPFMYYLWYAYRRRQNPVDGWFTNPPSNRPDRSANQEIIALMQRYGGHAKAIKDLSEKGLRAKTLDQNRSKIKDELCQLFGEELASPFLFESARDPQTARSQYRLALPATAISIHAPKSTSTRIATPSN
>NZ_CP014544.1|WP_156474873.1|3770261_3771152_+|hypothetical-protein
MTLAIREPMLPFRFFSANHTTYRAVMGLALSLPIALSVWMASRPLQALSLSDYRSYQCSTQGASTKPTFKILTLFYNYATDFADYLCASTLLAKSYSGVEIRWRPRAYLSPQHILDEEFDIFWNRHHIVAGLVPEFSNYYRVLQQTPNYALYWISQDSTPQLNSDYLQGKVIGFSRDSQSQTHFLQPMAALKQAGINLNADQKKFYTDPSALYAAFKNREVDMISTAISQADNLNLSTYYSLLINPEVPSGAWFIKNQLHHSHHRALECEIIRGLQVYAPLLAPLQQLSAQTADCP
>NZ_CP014544.1|WP_062384334.1|3769216_3770068_-|LLM-class-F420-dependent-oxidoreductase
MHLGFSSMNTVNDPDPAELAKTLEDAGFESLWYGEHSHIPRCRSTAYPAGGELPEPYKEMMDPYISLMAAAAATTRLKLGTGIALLMERELFSQAKTIATLDRLSGGRVLIGSGVGWNQEEFENVSQQPWQRRYGVLKETVAATRALFADEAPEFHGEFIDFDPVWFEPKPLRSPPMIFGAMGPLGMRHTAEWADGWMPVDVALPDVKAAIKAFHDLLAEFGRKPNEVEVTLVVMSEVTPDLLKYYRDCGVDRCNIGVGMQNWNKPEIVMPMIERFSKIIAQL
>NZ_CP014544.1|WP_062384331.1|3768220_3769156_-|pirin-family-protein
MSNQQHDSEASQSSDCPRHIDPIQKISARSAEIGGGITVNRVLPSRQRRMIGAWCFLDHAGPAVFRDGTGMKVGPHPHIGLQTFTWMVAGEVLHRDSLGNVAEVRPGEVNLMTAGRGISHTEESLAGSEQLHAAQLWIALPYQDRECEPAFDHYPELPVWRQGDSQLILLAGRYAGEQSPAKIYSPLLAVDIVSASGDELYLPLDTRFEYGILVLQGDIVVCGQRFVENDLAYFSPGANELQVTLSPNSQIIFLGGEPFAGDITLWWNFVGHSRVEITQAQRDWEAGSSRFGSISGFDGAPLIAPPLPWRE
>NZ_CP014544.1|WP_008252385.1|3766296_3768096_-|potassium-transporter
MPHESSLLQAMVVLLLAAVLVVPLAKRLQLGAVLGYLIAGVAIGPAALELIHNPENIAHFSEFGVVLLLFIIGLELSPKRLWLMRRAVFGVGFAQVALSGLLIGAVAYFSFDQPIRTAIVLGLGLALSSTAFGLQILAERKQLGSPHGRLAFAILLFQDIAAIPLIALVPLLSGNSGADGAETGTSVVRILLCIAAVVVGGRYLLRPVFRMVARTGLQDVSTATALLVVIGTAWLMDLAGVSMALGAFLAGLLLADSEYRHELESQIEPFKGLLLGLFFISVGMTADVHLLLQEPLTVLGLSALLMIIKLPVLALLGKTLGGLDRSSALKLGIVLAAGGEFAFVIFQIARQQQLFSAELHSMLILAITVSMALTPFLIILIAKVLQPKAQPQSVPPEYEEIESDQPRVVIVGMGRMGQIVARILRAQRVPFVALDLSVDTIELSRSIDSMPVFYGDPLRPEILRAVDADKAEYFVLAADDPETNIKITELVSRLYPHIKFIARARSRFHVHRLLELGATPIRETFHSSLEMSRIALMGLGLSEARAQARISRFQQHDEALLAQQHQVFNDREALLQSARDAHDELQALFDADVIEERGL
>NZ_CP014544.1|WP_008252405.1|3778488_3780384_-|phosphomethylpyrimidine-synthase-ThiC
MSSDYPLLRDTAQVDAASVEPLPGSSKIYVQGSRADIQVPMREIKLTPTPVQARDGSTSLEPNPPVRVYDTSGAYTDPKAKIDIRKGLEPIRDQWILDRNDTELLAGDSSEYSRKRAADLSLQQLRFDLKRNPRRALPGKNVSQMHYARLGIITPEMEYIAIRENMALAAAKEAGELPGDLGFQHPGNAFGASIPKEVTPEFVRDEVARGRAIIPANINHPELEPMIIGRNFLVKVNGNIGNSALGSSIEEEVAKLTWGIRWGADTMMDLSTGKNIHETREWIVRNSPVPVGTVPIYQALEKVDGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLSHHKENFLYTHFDDICEIMKAYDVSFSLGDGLRPGSVADANDEAQFGELRTLGELTKRAWKHDVQVMIEGPGHVPMQMIHENMTEQLKHCDEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGSQLRDNALSKARFEFRWEDQFNLGLDPDTARSYHDETLPKESAKVAHFCSMCGPKFCSMKITQDVRDYAAKLEEDELEAEMQKKSAEFKELGSEIYQKV
>NZ_CP014544.1|WP_008252407.1|3781158_3781401_+|hypothetical-protein
MRYTPNCYYKTIVSYFLLGVISLLSACGGGSSPSVGTPITPSSLTINPQVNQFAKGTSQQFAAIVQFSNGTTLDPSNSAS
>NZ_CP014544.1|WP_081482722.1|3781749_3782061_+|Ig-like-domain-containing-protein
MALTRAAKSLARIELSPENSSVSGNATVQYTATGVYTDNSTSNLTTQVTWASSNTNVATICNDEGSKGLAYAKLQFVATTTEITAFHANTNITGRTNLMVTAF
>NZ_CP014544.1|WP_008252409.1|3782625_3783351_+|hypothetical-protein
MRTNTFGKGVLAIIGIFGSVLSFADNTPVVTVVTEGDDVKSITYEGNDTVYHFGQGVLVGNPRDPCEAHDQPYVNNTTESEPYFFLRITPADGKVEVLQGRFPLSHSFISESKMLNNNERGKEFAKAGIAKAFVRIKYETYNPENGFTDIAGFTGMITTLPEALVQGTWVYSRTFSESDTCSYAAPLRGLSKTTPQVAEQQSGIITTIKQLVFEYLVNGSKNVTPSEKTYKMKSTVTGVRG
>NZ_CP014544.1|WP_008252411.1|3783355_3783973_+|hypothetical-protein
MKIYAIRAVLLVTLLASFPLAKVHAQDNATEFTLIGYALNTNSDSEETQTSVAVFDISLDFEDEVIEFAYSFIGAADANELRVQFTTAGVTEELPQLSELTETGEDRLATLLLDSATVAGKTGQLSFTLNNKALEAGVTSQLFLVDIAESSAAAPEAFAPPPPIELKPSGGRSGGGADSLLILFCIILIFLRLAWPKSYTESRRF
>NZ_CP014544.1|WP_008252413.1|3784167_3785367_-|formate-dependent-phosphoribosylglycinamide-formyltransferase
MVSLGTPFSDSACKVLLCGAGELGKEVAIELQRLGVEVIACDRYANAPAMQVADRSYTFSMLDGAELRRVIELEKPDYIVPEIEAIATDTLIDLEREGYNVVPTARAAQLTMNREGIRRLVAEKLELPTSAYRFADSKNEFDAAVAEIGLPCVIKPIMSSSGKGQSLVRRPAEIDAAWTYAQEGGRAGAGRVIVEGFVDFDYEITLLTIRHRGANGEDTATSYCAPIGHLQKDGDYQESWQPQPMSDTALQRAQQMAEQVTTALGGWGLFGVELFVKGDEVIFSEVSPRPHDTGLVTLISQDLSEFALHVRAILGLPIPNIQQHGPSASAVILVDGSSQRVRFGNLDHALDVPDTQLRLFGKPEVDGKRRMGAALARGGNIDEARAKALAVVEAVTVSL
>NZ_CP014544.1|WP_008252416.1|3785400_3785871_-|hypothetical-protein
MKIPVSLLKNPVHLLSVGFGSGLAPKAPGTFGTIAALPFWYVLQFLPPAYYVVVLILAFILGVYLCGATADALGVHDHGGIVWDEFVGLWIALFMVPMHLGWILLGFALFRLFDIWKPWPIRVLDAKVHGGFGIMIDDVLAGVYAYLTLQLLYVLS
>NZ_CP014544.1|WP_008252418.1|3785883_3786858_-|thiamine-phosphate-kinase
MPVSEFQLIQQYFKVGVAAAQACPNSPVRCGIGDDCAVLALPPEDELLVSVDTLVESVHFPANYPSDLLARRALAVCVSDLAACGATPLGFTLALTLPKVDEPWLAGFANALAAAAAEFGIALVGGDTTRGPLCLSLQVMGSAPAGTAILRSGARPGDLVFVSGQLGDARAALAYLDKPLAQLSAAETALLARYHSPEPRLALGQKLRGLASAAVDISDGLAADLGHILKASGVAAVLYTEYLALSAALTETNPERAIEFALSGGDDYELCFTLPAEHREAALALGAELNLRLTEVGYVDVGEGLACYAADGGVITPAAGYQHF
>NZ_CP014544.1|WP_050985244.1|3786878_3787304_-|transcription-antitermination-factor-NusB
MQALYQWHMAGQALSVIEAEFQADYDMSNVDKEFFHDLVHSIPAQLTDLHGLFEKHLDRKLSDLDPIELCLLRMGSYELLRRIDVPYKVAINETINLGKRFGATDGYRYLNGILDKVAMECRAVEVAAERGKSPKPASDAE
>NZ_CP014544.1|WP_008252422.1|3787489_3787951_-|6,7-dimethyl-8-ribityllumazine-synthase
MKTIEGTFTAVGGNYAIVVGRWNSFVVESLLEGALDSLRRHGVKEDNITIVRAPGAFEIPLVCQKVADSKNYDAIIALGAVIRGGTPHFEYVAGECVKGLAQVSMQYSVPVSFGVLTVDSIEQAIERAGTKAGNKGEEAAMSAIEMVSLLKQL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	LN713927	Pseudomonas fluorescens SBW25 plasmid pQBR55, complete sequence	5695-5726	6	0.812
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	LN713926	Pseudomonas fluorescens SBW25 plasmid pQBR57, complete sequence	109161-109192	6	0.812
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	NC_009444	Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence	377299-377330	6	0.812
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	MN582098	Podoviridae sp. ctKoA10, complete genome	2511-2542	6	0.812
NZ_CP014544_1	1.1\|1467430\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467430-1467461	32	KC465899	Pelagibacter phage HTVC008M, complete genome	67575-67606	7	0.781
NZ_CP014544_1	1.6\|1467730\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467730-1467761	32	MG592611	Vibrio phage 1.246.O._10N.261.54.E10, partial genome	37872-37903	7	0.781
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	225692-225723	7	0.781
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	NZ_LR594692	Variovorax sp. WDL1 plasmid 4	22263-22294	7	0.781
NZ_CP014544_1	1.10\|1467970\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467970-1468001	32	NZ_LR723681	Arsenite-oxidising bacterium NT-25 plasmid 5	6565-6596	7	0.781
NZ_CP014544_1	1.10\|1467970\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467970-1468001	32	NZ_FO082822	Rhizobium sp. NT-26 plasmid NT26_p2, complete sequence	4147-4178	7	0.781
NZ_CP014544_1	1.12\|1468090\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468090-1468121	32	NC_015147	Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, complete sequence	21287-21318	7	0.781
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1526248-1526279	7	0.781
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	118164-118195	7	0.781
NZ_CP014544_1	1.25\|1468870\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468870-1468901	32	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	289251-289282	7	0.781
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	NC_048046	Caulobacter phage CcrPW, complete genome	21148-21179	8	0.75
NZ_CP014544_1	1.13\|1468150\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468150-1468181	32	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	168993-169024	8	0.75
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	74191-74222	8	0.75
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	716849-716880	8	0.75
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	716849-716880	8	0.75
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	758657-758688	8	0.75
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	534457-534488	8	0.75
NZ_CP014544_1	1.32\|1469290\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469290-1469321	32	NC_030948	Ralstonia phage RSP15 DNA, complete genome	141229-141260	8	0.75
NZ_CP014544_1	1.34\|1469410\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469410-1469441	32	NZ_CP028338	Lactobacillus plantarum strain SRCM101167 plasmid unnamed4, complete sequence	13713-13744	8	0.75
NZ_CP014544_1	1.36\|1469530\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469530-1469561	32	NZ_HG917973	Mycobacterium marinum E11 plasmid pRAW, complete sequence	42566-42597	8	0.75
NZ_CP014544_1	1.36\|1469530\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469530-1469561	32	NZ_AP018497	Mycobacterium marinum strain ATCC 927 plasmid pMMRN, complete sequence	116995-117026	8	0.75
NZ_CP014544_1	1.47\|1470190\|32\|NZ_CP014544\|CRISPRCasFinder,CRT	1470190-1470221	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	19993-20024	8	0.75
NZ_CP014544_1	1.7\|1467790\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467790-1467821	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1164149-1164180	9	0.719
NZ_CP014544_1	1.7\|1467790\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467790-1467821	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1164278-1164309	9	0.719
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	52986-53017	9	0.719
NZ_CP014544_1	1.10\|1467970\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467970-1468001	32	NZ_CP040762	Paracoccus sp. 2251 plasmid unnamed2, complete sequence	221063-221094	9	0.719
NZ_CP014544_1	1.10\|1467970\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467970-1468001	32	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	300233-300264	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	85028-85059	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	140610-140641	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP050100	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence	78616-78647	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	282099-282130	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP016291	Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence	43677-43708	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	83861-83892	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	104175-104206	9	0.719
NZ_CP014544_1	1.11\|1468030\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468030-1468061	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	230219-230250	9	0.719
NZ_CP014544_1	1.12\|1468090\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468090-1468121	32	NC_014157	Salinibacter ruber M8 plasmid pSR84, complete sequence	62557-62588	9	0.719
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	200756-200787	9	0.719
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	116670-116701	9	0.719
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	240046-240077	9	0.719
NZ_CP014544_1	1.21\|1468630\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468630-1468661	32	NZ_CP022370	Bosea sp. AS-1 plasmid unnamed1, complete sequence	167951-167982	9	0.719
NZ_CP014544_1	1.25\|1468870\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468870-1468901	32	MK448979	Streptococcus phage Javan534, complete genome	19258-19289	9	0.719
NZ_CP014544_1	1.25\|1468870\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468870-1468901	32	MK448799	Streptococcus phage Javan535, complete genome	19258-19289	9	0.719
NZ_CP014544_1	1.25\|1468870\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468870-1468901	32	MK448800	Streptococcus phage Javan539, complete genome	19259-19290	9	0.719
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	890850-890881	9	0.719
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	890850-890881	9	0.719
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	726550-726581	9	0.719
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	866207-866238	9	0.719
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	65922-65953	9	0.719
NZ_CP014544_1	1.37\|1469590\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469590-1469621	32	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	249455-249486	9	0.719
NZ_CP014544_1	1.40\|1469770\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469770-1469801	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	424341-424372	9	0.719
NZ_CP014544_1	1.40\|1469770\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469770-1469801	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	325933-325964	9	0.719
NZ_CP014544_1	1.40\|1469770\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469770-1469801	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1623841-1623872	9	0.719
NZ_CP014544_1	1.8\|1467850\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1467850-1467881	32	MN369758	Gordonia phage NHagos, complete genome	4402-4433	10	0.688
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	6043-6074	10	0.688
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NC_048047	Caulobacter phage CcrBL9, complete genome	8451-8482	10	0.688
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NC_048047	Caulobacter phage CcrBL9, complete genome	308463-308494	10	0.688
NZ_CP014544_1	1.20\|1468570\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468570-1468601	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	143363-143394	10	0.688
NZ_CP014544_1	1.21\|1468630\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468630-1468661	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1017528-1017559	10	0.688
NZ_CP014544_1	1.23\|1468750\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468750-1468781	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	65167-65198	10	0.688
NZ_CP014544_1	1.27\|1468990\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468990-1469021	32	NZ_CP046906	Streptomyces sp. QHH-9511 plasmid unnamed, complete sequence	7787-7818	10	0.688
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	679020-679051	10	0.688
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1257264-1257295	10	0.688
NZ_CP014544_1	1.29\|1469110\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469110-1469141	32	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	145767-145798	10	0.688
NZ_CP014544_1	1.34\|1469410\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469410-1469441	32	MN582082	Podoviridae sp. ctrTa16, complete genome	32670-32701	10	0.688
NZ_CP014544_1	1.34\|1469410\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469410-1469441	32	KR997933	Mycobacterium phage Madruga, complete genome	35014-35045	10	0.688
NZ_CP014544_1	1.34\|1469410\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469410-1469441	32	NC_023691	Mycobacterium phage Patience, complete genome	35895-35926	10	0.688
NZ_CP014544_1	1.36\|1469530\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469530-1469561	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4567531-4567562	10	0.688
NZ_CP014544_1	1.38\|1469650\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469650-1469681	32	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1462908-1462939	10	0.688
NZ_CP014544_1	1.19\|1468510\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1468510-1468541	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1451897-1451928	11	0.656
NZ_CP014544_1	1.28\|1469050\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469050-1469081	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	725452-725483	11	0.656
NZ_CP014544_1	1.42\|1469890\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469890-1469921	32	NC_021067	Vibrio phage helene 12B3 genomic sequence	95981-96012	11	0.656
NZ_CP014544_1	1.42\|1469890\|32\|NZ_CP014544\|PILER-CR,CRISPRCasFinder,CRT	1469890-1469921	32	HQ634195	Vibrio phage eugene 12A10 genomic sequence	112113-112144	11	0.656

1. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to LN713927 (Pseudomonas fluorescens SBW25 plasmid pQBR55, complete sequence) position: , mismatch: 6, identity: 0.812

gagaacaacaacaacgctgccgacccgcaagc-	CRISPR spacer
gagatcgacaacaacgctgccga-acgcgcgct	Protospacer
**** *.****************  ***. **

2. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to LN713926 (Pseudomonas fluorescens SBW25 plasmid pQBR57, complete sequence) position: , mismatch: 6, identity: 0.812

gagaacaacaacaacgctgccgacccgcaagc-	CRISPR spacer
gagatcgacaacaacgctgccga-acgcgcgct	Protospacer
**** *.****************  ***. **

3. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_009444 (Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence) position: , mismatch: 6, identity: 0.812

gagaacaacaacaacgctgccgacccgcaagc-	CRISPR spacer
gagatcgacaacaacgctgccga-acgcgcgct	Protospacer
**** *.****************  ***. **

4. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MN582098 (Podoviridae sp. ctKoA10, complete genome) position: , mismatch: 6, identity: 0.812

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
tgcgcgaaatcgcccgcgacgaagaccgcttt	Protospacer
*...**** ***************** *** *

5. spacer 1.1|1467430|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to KC465899 (Pelagibacter phage HTVC008M, complete genome) position: , mismatch: 7, identity: 0.781

atatttaaatttctcagttgcaccagacactg-	CRISPR spacer
ctatttcaatttctcagctgcacca-acatcaa	Protospacer
 ***** **********.******* ***...

6. spacer 1.6|1467730|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MG592611 (Vibrio phage 1.246.O._10N.261.54.E10, partial genome) position: , mismatch: 7, identity: 0.781

tataagtgcgcgctttgttgctgtgcttgttg	CRISPR spacer
tgcactggcgcgctttgttgctgttgttgttg	Protospacer
*..*   *****************  ******

7. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 7, identity: 0.781

gagaacaacaacaacgctgccgacccgcaagc---	CRISPR spacer
gagatcgacaacaacgctgccga---gcgcgccct	Protospacer
**** *.****************   **. **

8. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594692 (Variovorax sp. WDL1 plasmid 4) position: , mismatch: 7, identity: 0.781

gagaacaacaacaacgctgccgacccgcaagc---	CRISPR spacer
gagatcgacaacaacgctgccga---gcgtgccct	Protospacer
**** *.****************   **. **

9. spacer 1.10|1467970|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR723681 (Arsenite-oxidising bacterium NT-25 plasmid 5) position: , mismatch: 7, identity: 0.781

-aagtgcgacctcgccgcattgcgcccaagccc	CRISPR spacer
acggcgcg-tctcgccgcattgcgggcaagccc	Protospacer
  .*.*** .**************  *******

10. spacer 1.10|1467970|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_FO082822 (Rhizobium sp. NT-26 plasmid NT26_p2, complete sequence) position: , mismatch: 7, identity: 0.781

-aagtgcgacctcgccgcattgcgcccaagccc	CRISPR spacer
acggcgcg-tctcgccgcattgcgggcaagccc	Protospacer
  .*.*** .**************  *******

11. spacer 1.12|1468090|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_015147 (Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, complete sequence) position: , mismatch: 7, identity: 0.781

acccttgccaaggaagtgaccacggcggctac	CRISPR spacer
acccttcccaaggaattgaccacgactacagc	Protospacer
****** ******** ********.* .* .*

12. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 7, identity: 0.781

tatacgaactcgcccgcgacgaag----acggctat	CRISPR spacer
tagacgagctcgcccgcgacgaagcggtgcgg----	Protospacer
** ****.****************    .***

13. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 7, identity: 0.781

tatacgaactcgcccgcgacgaag----acggctat	CRISPR spacer
tagacgagctcgcccgcgacgaagcggtgcgg----	Protospacer
** ****.****************    .***

14. spacer 1.25|1468870|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 7, identity: 0.781

ggtaaacaataccgagcgccgaaactaccaga	CRISPR spacer
cggtagcaagaccgagcgccgcaactaccagc	Protospacer
 *  *.*** *********** *********

15. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_048046 (Caulobacter phage CcrPW, complete genome) position: , mismatch: 8, identity: 0.75

gagaacaacaacaacgctgccgacccgcaagc	CRISPR spacer
ctgatcaacaacaacgcggccgacctgtccgc	Protospacer
  ** ************ *******.*.  **

16. spacer 1.13|1468150|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agctgccaccaatacaccagccgctattttaa	CRISPR spacer
agctgcaacaaatacaccagccgagcagataa	Protospacer
****** ** *************      ***

17. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 8, identity: 0.75

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
agcgcgaactcggccgcgacgaagaaggcgtt	Protospacer
 ...******** ************ ***  *

18. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 8, identity: 0.75

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
tcgcgatcgctcttgttgaaaccgtcgaagaa	Protospacer
*.   *****. ***************** *

19. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 8, identity: 0.75

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
tcgcgatcgctcttgttgaaaccgtcgaagaa	Protospacer
*.   *****. ***************** *

20. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.75

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
tctcggtcgcttttgttgaaaccgtcgaagaa	Protospacer
*.*  .****. ***************** *

21. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.75

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
ctttttgcgccgttcttgaaaccggcgaatgc	Protospacer
.** *  ******* ********* *****..

22. spacer 1.32|1469290|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_030948 (Ralstonia phage RSP15 DNA, complete genome) position: , mismatch: 8, identity: 0.75

aagcactacaccaacatgaacgacacactgtt-	CRISPR spacer
aagcacaacaccaatatgaacga-attcaatcc	Protospacer
****** *******.******** *. * .*.

23. spacer 1.34|1469410|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028338 (Lactobacillus plantarum strain SRCM101167 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gaatgcttgatactgagatttataatcttagt	CRISPR spacer
gtatcgacgatactgaggttgataatcttaga	Protospacer
* **   .*********.** **********

24. spacer 1.36|1469530|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG917973 (Mycobacterium marinum E11 plasmid pRAW, complete sequence) position: , mismatch: 8, identity: 0.75

attagctgctggatctcgccagtggtgtagcc	CRISPR spacer
agtggctgctggagctcgacagtggtggcgat	Protospacer
* *.********* **** ********  * .

25. spacer 1.36|1469530|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018497 (Mycobacterium marinum strain ATCC 927 plasmid pMMRN, complete sequence) position: , mismatch: 8, identity: 0.75

attagctgctggatctcgccagtggtgtagcc	CRISPR spacer
agtggctgctggagctcgacagtggtggcgat	Protospacer
* *.********* **** ********  * .

26. spacer 1.47|1470190|32|NZ_CP014544|CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 8, identity: 0.75

attgattcagagggccgtgggccgctccacat	CRISPR spacer
aaggccttcgagggccgcgggccgatccacat	Protospacer
*  * .*. ********.****** *******

27. spacer 1.7|1467790|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acctcgcaccgaatcgagatgaccttaccatc	CRISPR spacer
cattggcatcgaatcgagatgaccttgccgca	Protospacer
  .* ***.*****************.**..

28. spacer 1.7|1467790|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acctcgcaccgaatcgagatgaccttaccatc	CRISPR spacer
cattggcatcgaatcgagatgaccttgccgca	Protospacer
  .* ***.*****************.**..

29. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 9, identity: 0.719

gagaacaacaacaacgctgccgacccgcaagc	CRISPR spacer
gagatcgacaacaacgctgccgaacgggcgct	Protospacer
**** *.**************** * *  . .

30. spacer 1.10|1467970|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040762 (Paracoccus sp. 2251 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aagtgcgacctcgccgcattgcgcccaagccc	CRISPR spacer
tcctgcggcctcgccggattgcgccctcttcc	Protospacer
   ****.******** *********   .**

31. spacer 1.10|1467970|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 9, identity: 0.719

aagtgcgacctcgccgcattgcgcccaagccc	CRISPR spacer
ggctgcgtcctcgccgcattgcggcccgacgc	Protospacer
.. **** *************** ** ..* *

32. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggccgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

33. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggccgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

34. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggccgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

35. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggccgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

36. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggccgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

37. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggctgccagcgtcttgcgaaagcc	Protospacer
*  *   ..** ******.*************

38. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggcggccagcgtcttgcgaaagcc	Protospacer
*  *   ..**.******.*************

39. spacer 1.11|1468030|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcaaagcagccagcatcttgcgaaagcc	CRISPR spacer
agcccgtgggcggccagcgtcttgcgaaagcc	Protospacer
*  *   ..**.******.*************

40. spacer 1.12|1468090|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_014157 (Salinibacter ruber M8 plasmid pSR84, complete sequence) position: , mismatch: 9, identity: 0.719

acccttgccaaggaagtgaccacggcggctac	CRISPR spacer
tgtccggccaagggaatgaccacggcggcatc	Protospacer
  .*. *******.*.*************  *

41. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 9, identity: 0.719

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
aagtcgaactcgcccgcggcgaaggcggtcca	Protospacer
 *  **************.*****.***..

42. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
aaccggaactcgcgcgcgacgaagaccgcggc	Protospacer
 *.  ******** ************ ** ..

43. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 9, identity: 0.719

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
cacacgaacacgcccgcgacgcagaccccgtc	Protospacer
.*.****** *********** ****  *  .

44. spacer 1.21|1468630|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022370 (Bosea sp. AS-1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aaagatataaccggcaccctcgaagacaagcc	CRISPR spacer
cagggcgaaaccggcacgctcgaaaacaagct	Protospacer
 *.*... ********* ******.******.

45. spacer 1.25|1468870|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MK448979 (Streptococcus phage Javan534, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaacaataccgagcgccgaaactaccaga	CRISPR spacer
ctcaaacaataccgagtgcctaaactacgcat	Protospacer
  .*************.*** *******  .

46. spacer 1.25|1468870|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MK448799 (Streptococcus phage Javan535, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaacaataccgagcgccgaaactaccaga	CRISPR spacer
ctcaaacaataccgagtgcctaaactacgcat	Protospacer
  .*************.*** *******  .

47. spacer 1.25|1468870|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MK448800 (Streptococcus phage Javan539, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaacaataccgagcgccgaaactaccaga	CRISPR spacer
ctcaaacaataccgagtgcctaaactacgcat	Protospacer
  .*************.*** *******  .

48. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.719

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
cgaattgttccgttgttgaagccgtcgaacat	Protospacer
.  **  . ***********.********.**

49. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.719

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
cgaattgttccgttgttgaagccgtcgaacat	Protospacer
.  **  . ***********.********.**

50. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 9, identity: 0.719

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
tcgcggtcgcttttgttgaaaccgtcgaagaa	Protospacer
*.   .****. ***************** *

51. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
cgaattgttccgttgttgaagccgtcgaacat	Protospacer
.  **  . ***********.********.**

52. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.719

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
tcgcggtcgcttttgttgaaaccgtcgaagaa	Protospacer
*.   .****. ***************** *

53. spacer 1.37|1469590|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcttgcatcatgcggttgcgctcagcttcata	CRISPR spacer
gacgcgatcatgcggtcgcgctccgcttcgtc	Protospacer
* .   **********.****** *****.*

54. spacer 1.40|1469770|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcaagcaggccgaacaatacggc--gttgac	CRISPR spacer
ccttcaagcgggccgaacaatccggcaagccg--	Protospacer
   ******.*********** ****  *..*

55. spacer 1.40|1469770|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcaagcaggccgaacaatacggc--gttgac	CRISPR spacer
ccttcaagcgggccgaacaatccggcaagccg--	Protospacer
   ******.*********** ****  *..*

56. spacer 1.40|1469770|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcaagcaggccgaacaatacggc--gttgac	CRISPR spacer
ccttcaagcgggccgaacaatccggcaagccg--	Protospacer
   ******.*********** ****  *..*

57. spacer 1.8|1467850|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MN369758 (Gordonia phage NHagos, complete genome) position: , mismatch: 10, identity: 0.688

gagaacaacaacaacgctgccgacccgcaagc	CRISPR spacer
ctcgacaacaacaacgccgccgacgcgtggtc	Protospacer
   .*************.****** **... *

58. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
gcgtcgaactcgcccgcgtcgtagacgaatcc	Protospacer
    ************** ** *****. * .

59. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 10, identity: 0.688

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
aggcctggatcgcccgcaacgaagaccgctat	Protospacer
 .  * .. ********.******** *****

60. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 10, identity: 0.688

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
aggcctggatcgcccgcaacgaagaccgctat	Protospacer
 .  * .. ********.******** *****

61. spacer 1.20|1468570|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 10, identity: 0.688

aaagcctgcaagcctatcacctccgcccgata	CRISPR spacer
gaggcctggaagcctatcaccgccgcggtgcg	Protospacer
.*.***** ************ ****   ...

62. spacer 1.21|1468630|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

aaagatataaccggcaccctcgaagacaagcc	CRISPR spacer
gtccacggcacgggcaccctcgaagaccagcc	Protospacer
.   *..  ** *************** ****

63. spacer 1.23|1468750|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

acacggtaggcgctactgccgacacgctagca	CRISPR spacer
tgccggtaggcgccattgccgacacgcgtttc	Protospacer
   **********.*.***********   .

64. spacer 1.27|1468990|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046906 (Streptomyces sp. QHH-9511 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttagcgctggccacggcctcagtaattcccc	CRISPR spacer
cccgacgctggccacggcctcagcagttgcgt	Protospacer
 ....******************.*.** * .

65. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 10, identity: 0.688

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
acgcgatcgtcgttgttgaaaacgtcgaacgc	Protospacer
 .   ****.*********** *******...

66. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
atgcgatcgtcgttgttgaaaacgtcgagcgc	Protospacer
 *   ****.*********** ******....

67. spacer 1.29|1469110|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

atttgcgcaatattccacggcgacaccaagga	CRISPR spacer
ctggccgcaatattccactgcgaccccattcc	Protospacer
 *   ************* ***** ***

68. spacer 1.34|1469410|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to MN582082 (Podoviridae sp. ctrTa16, complete genome) position: , mismatch: 10, identity: 0.688

gaatgcttgatactgagatttataatcttagt	CRISPR spacer
cttatctttatactgagattgataatctttta	Protospacer
     *** *********** ********

69. spacer 1.34|1469410|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to KR997933 (Mycobacterium phage Madruga, complete genome) position: , mismatch: 10, identity: 0.688

gaatgcttgatactgagatttataatcttagt	CRISPR spacer
agctgcttgagactgagatttatgatgctgcg	Protospacer
.. ******* ************.** .*.

70. spacer 1.34|1469410|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_023691 (Mycobacterium phage Patience, complete genome) position: , mismatch: 10, identity: 0.688

gaatgcttgatactgagatttataatcttagt	CRISPR spacer
agctgcttgaaactgagatttatgatgctgcg	Protospacer
.. ******* ************.** .*.

71. spacer 1.36|1469530|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

attagctgctggatctcgccagtggtgtagcc	CRISPR spacer
acgttctgctggatctccgcagtggtgtgttg	Protospacer
*.   ************  *********. .

72. spacer 1.38|1469650|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.688

aagaaaagggcattgctgagattattaccact	CRISPR spacer
cagaaaatggcattgttgagattacccaagca	Protospacer
 ****** *******.********..   .*

73. spacer 1.19|1468510|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 11, identity: 0.656

tatacgaactcgcccgcgacgaagacggctat	CRISPR spacer
cgatcgaactcgcccgcgccgaagccgagcgc	Protospacer
..  ************** ***** **. ...

74. spacer 1.28|1469050|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.656

tttatatcgccgttgttgaaaccgtcgaatat	CRISPR spacer
acatcatcgccgatgttgaaaccatcgacatc	Protospacer
 .  .******* **********.****   .

75. spacer 1.42|1469890|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to NC_021067 (Vibrio phage helene 12B3 genomic sequence) position: , mismatch: 11, identity: 0.656

accccctcaactttcaataagccttgctcaat	CRISPR spacer
gaagtttcaactttcaataatccttgatcttc	Protospacer
.   ..************** ***** **  .

76. spacer 1.42|1469890|32|NZ_CP014544|PILER-CR,CRISPRCasFinder,CRT matches to HQ634195 (Vibrio phage eugene 12A10 genomic sequence) position: , mismatch: 11, identity: 0.656

accccctcaactttcaataagccttgctcaat	CRISPR spacer
gaagtttcaactttcaataatccttgatcttc	Protospacer
.   ..************** ***** **  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

152435 : 216102

Bacillus_phage(14.29%)

protease,integrase,transposase

attL 185322:185356|attR 216192:216226

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156474828.1\|152435_153311_+\|protease	serine protease	NA	NA	NA	NA
WP_062382400.1\|153305_155393_-	hypothetical protein	NA	NA	NA	NA
WP_062384783.1\|155676_157683_-	DNA helicase Rep	A7KV33	Bacillus_phage	2.5e-117	38.5
WP_062382402.1\|157783_158245_-	ATP-binding protein	NA	NA	NA	NA
WP_082793631.1\|158278_160048_+	recombinase family protein	NA	NA	NA	NA
WP_062382407.1\|160107_160638_+	hypothetical protein	NA	NA	NA	NA
WP_062382410.1\|161391_162090_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_156474829.1\|162174_162573_+	hypothetical protein	NA	NA	NA	NA
WP_062384786.1\|162707_163262_+\|integrase	tyrosine-type recombinase/integrase	A0A141E0P1	Streptococcus_phage	7.6e-16	27.9
WP_062382419.1\|164235_164433_-	carbon storage regulator	NA	NA	NA	NA
WP_062382422.1\|164459_165107_-	HNH endonuclease	A0A1S6L216	Vibrio_phage	4.0e-24	38.2
WP_008253379.1\|166621_166885_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_156474882.1\|167245_168139_+	urease accessory protein UreD	NA	NA	NA	NA
WP_008253381.1\|168184_168487_+	urease subunit gamma	NA	NA	NA	NA
WP_008253382.1\|168507_168828_+	urease subunit beta	NA	NA	NA	NA
WP_062382430.1\|168832_170536_+	urease subunit alpha	NA	NA	NA	NA
WP_062382432.1\|170588_171056_+	urease accessory protein UreE	NA	NA	NA	NA
WP_062382437.1\|171048_171717_+	urease accessory protein UreF	NA	NA	NA	NA
WP_086005650.1\|171743_172361_+	urease accessory protein UreG	NA	NA	NA	NA
WP_062382441.1\|172378_172987_+	hypothetical protein	NA	NA	NA	NA
WP_008253388.1\|173236_174553_+	urea ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_008253389.1\|174664_176344_+	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA
WP_008253390.1\|176350_177505_+	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA
WP_008253391.1\|177501_178281_+	urea ABC transporter ATP-binding protein UrtD	A0A2R8FG22	Brazilian_cedratvirus	2.5e-12	27.7
WP_008253397.1\|178285_178981_+	urea ABC transporter ATP-binding subunit UrtE	A0A2H4PQG7	Staphylococcus_phage	1.2e-13	28.8
WP_062382446.1\|179727_180324_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	7.7e-06	34.0
WP_008253399.1\|180320_180902_+	YceI family protein	NA	NA	NA	NA
WP_062382449.1\|181027_182428_-	AarF/ABC1/UbiB kinase family protein	M4R0M8	Ostreococcus_lucimarinus_virus	4.4e-20	27.3
WP_156474830.1\|182482_183760_+	divalent metal cation transporter	NA	NA	NA	NA
WP_062382456.1\|183797_184568_-	dienelactone hydrolase family protein	NA	NA	NA	NA
185322:185356	attL	NA	NA	NA	NA
WP_008253403.1\|185661_186591_+	hypothetical protein	NA	NA	NA	NA
WP_062382458.1\|187072_187738_+	histidine kinase	NA	NA	NA	NA
WP_008253407.1\|187824_188163_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_062382461.1\|188229_189474_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	2.4e-54	37.0
WP_062382475.1\|190760_191921_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_008253411.1\|192564_192903_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_008253412.1\|193106_193307_+	hypothetical protein	NA	NA	NA	NA
WP_008253413.1\|193319_194030_-	HAD family hydrolase	NA	NA	NA	NA
WP_008253414.1\|194016_194922_-	tyrosine recombinase XerC	G1D5R6	Mycobacterium_phage	6.2e-15	28.6
WP_062382481.1\|195090_196293_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_062382485.1\|197676_198381_-	DUF484 family protein	NA	NA	NA	NA
WP_062382488.1\|198389_199220_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_062382492.1\|199332_200580_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_062382495.1\|200591_200804_-	lipoprotein	NA	NA	NA	NA
WP_008253420.1\|200864_201179_+	iron donor protein CyaY	NA	NA	NA	NA
WP_062382498.1\|201734_202670_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_062382501.1\|203019_205791_-	class I adenylate cyclase	NA	NA	NA	NA
WP_062382505.1\|205855_207886_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_062382508.1\|208370_209189_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	A0A127AWE5	Bacillus_phage	1.0e-16	28.9
WP_062384789.1\|210030_211770_-	gamma-glutamyltransferase	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	4.8e-08	26.0
WP_062382512.1\|212438_212726_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_008253427.1\|212761_213013_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	5.4e-22	59.6
WP_062382515.1\|213020_213506_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.4e-28	41.8
WP_062384793.1\|213734_215297_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.9e-126	49.3
WP_081482690.1\|215407_215761_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_082793634.1\|215739_216102_-\|transposase	transposase	NA	NA	NA	NA
216192:216226	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1874338 : 1950749

uncultured_Mediterranean_phage(13.33%)

protease,tRNA,transposase,integrase,tail

attL 1946396:1946431|attR 1960670:1960705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008247831.1\|1874338_1875595_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.4e-19	85.2
WP_008247833.1\|1875645_1875861_-	cold shock domain-containing protein CspD	Q9AZD3	Lactococcus_phage	6.7e-13	55.2
WP_143829345.1\|1876053_1876404_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-14	49.4
WP_008247837.1\|1876435_1878715_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	3.4e-163	42.1
WP_008247839.1\|1878725_1878944_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_040802926.1\|1879075_1879780_-	arginyltransferase	NA	NA	NA	NA
WP_008247841.1\|1879776_1880502_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_008247842.1\|1880520_1881471_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	2.1e-66	44.8
WP_008247843.1\|1881711_1884012_+	DNA translocase FtsK	G1DAY1	Mycobacterium_virus	6.4e-85	48.6
WP_008247846.1\|1884023_1884626_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_050985174.1\|1884661_1885924_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-77	40.0
WP_008247849.1\|1885969_1886347_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	3.0e-08	41.8
WP_008247850.1\|1886392_1887697_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.3e-93	51.4
WP_008247851.1\|1887700_1889104_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_008247852.1\|1889158_1890529_+	glutathione-disulfide reductase	NA	NA	NA	NA
WP_143829334.1\|1890582_1892706_-\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	4.5e-93	34.4
WP_008247861.1\|1892853_1893249_+	nuclear transport factor 2	NA	NA	NA	NA
WP_008247862.1\|1893559_1895188_+	long-chain-fatty-acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.1e-25	27.3
WP_008247866.1\|1895256_1896063_+	thioesterase family protein	NA	NA	NA	NA
WP_008247867.1\|1896165_1897668_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_008247878.1\|1897708_1899355_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_008247879.1\|1899355_1900342_+	peptidase M15	NA	NA	NA	NA
WP_143829335.1\|1900472_1901312_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_008247885.1\|1901327_1903727_+	MMPL family transporter	NA	NA	NA	NA
WP_008247886.1\|1903742_1904291_-	cytochrome c	NA	NA	NA	NA
WP_008247887.1\|1904315_1904663_-	hypothetical protein	NA	NA	NA	NA
WP_008247888.1\|1904715_1905441_-	copper resistance protein B	NA	NA	NA	NA
WP_050985169.1\|1905437_1907363_-	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_040802701.1\|1907512_1907947_-	hypothetical protein	NA	NA	NA	NA
WP_008247891.1\|1908027_1908444_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_008247893.1\|1908445_1910917_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.5e-121	37.7
WP_081482616.1\|1910928_1911234_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_008247897.1\|1911274_1912429_-	sulfate/molybdate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.7e-28	35.0
WP_008247899.1\|1912455_1913316_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA
WP_008247911.1\|1913312_1914182_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA
WP_008247919.1\|1914223_1915255_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_086005639.1\|1916018_1917014_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_008247922.1\|1917123_1917486_+	hypothetical protein	NA	NA	NA	NA
WP_040802704.1\|1917570_1918932_+	TolC family protein	NA	NA	NA	NA
WP_143829346.1\|1918988_1919888_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_008247935.1\|1919983_1923121_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_008247937.1\|1923217_1923520_-	hypothetical protein	NA	NA	NA	NA
WP_008247939.1\|1923523_1924468_-	sodium-dependent bicarbonate transport family permease	NA	NA	NA	NA
WP_008247941.1\|1924630_1925518_-	cation transporter	NA	NA	NA	NA
WP_143829347.1\|1925714_1926848_+	DUF3754 domain-containing protein	NA	NA	NA	NA
WP_008247945.1\|1927019_1927472_-	hypothetical protein	NA	NA	NA	NA
WP_008247955.1\|1928173_1928977_+	hypothetical protein	NA	NA	NA	NA
WP_008247958.1\|1929154_1930312_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_008247960.1\|1930381_1930990_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_143829348.1\|1931068_1931932_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_008247963.1\|1932097_1932850_+	DUF1461 domain-containing protein	NA	NA	NA	NA
WP_008247965.1\|1933105_1933606_+	AP2 domain-containing protein	NA	NA	NA	NA
WP_008247967.1\|1934021_1934480_+	hypothetical protein	NA	NA	NA	NA
WP_008247970.1\|1934689_1936057_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_008247972.1\|1936110_1936737_+	superoxide dismutase family protein	A0A0C5AQ67	Spodoptera_frugiperda_granulovirus	8.0e-14	34.6
WP_008247975.1\|1936987_1937575_+	hypothetical protein	NA	NA	NA	NA
WP_008247990.1\|1937640_1938057_+	hypothetical protein	NA	NA	NA	NA
WP_008247992.1\|1938057_1939086_+	hypothetical protein	NA	NA	NA	NA
WP_008247994.1\|1939146_1939578_+	hypothetical protein	NA	NA	NA	NA
WP_008247997.1\|1939591_1939915_+	hypothetical protein	NA	NA	NA	NA
WP_156474854.1\|1940407_1943473_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_040802713.1\|1943681_1944515_+	sprT domain-containing protein	NA	NA	NA	NA
WP_008248003.1\|1944656_1945889_-\|integrase	site-specific integrase	NA	NA	NA	NA
1946396:1946431	attL	NA	NA	NA	NA
WP_008251030.1\|1946460_1949469_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.1e-79	25.8
WP_008251029.1\|1949498_1950749_-\|integrase	site-specific integrase	NA	NA	NA	NA
1960670:1960705	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3096518 : 3109045

Vibrio_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062384039.1\|3096518_3097325_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2R4ALY4	Aeromonas_phage	4.6e-06	45.9
WP_062384042.1\|3097433_3098525_+\|tRNA	CCA tRNA nucleotidyltransferase	A0A2I7SAR1	Vibrio_phage	9.6e-55	50.4
WP_062384049.1\|3098546_3098813_-	hypothetical protein	NA	NA	NA	NA
WP_062384052.1\|3098802_3099066_-	BrnT family toxin	NA	NA	NA	NA
WP_062384054.1\|3099144_3099636_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_062384057.1\|3099628_3100024_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_062384059.1\|3100075_3101101_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.7e-109	60.2
WP_008248432.1\|3101290_3101506_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_062384061.1\|3101573_3102026_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.6e-24	46.6
WP_062384064.1\|3102113_3103979_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	9.6e-71	36.6
WP_008248427.1\|3104089_3105904_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.2e-35	33.2
WP_062384066.1\|3105985_3106465_+	hypothetical protein	NA	NA	NA	NA
WP_062384068.1\|3106478_3108677_-	response regulator	A0A1V0SGX0	Hokovirus	5.6e-38	32.1
WP_008248423.1\|3108673_3109045_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	2.4e-10	30.6

DBSCAN-SWA_4

3787489 : 3795287

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008252422.1\|3787489_3787951_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	7.4e-33	51.7
WP_008252424.1\|3787976_3789107_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	7.3e-58	36.5
WP_008252426.1\|3789131_3789806_-	riboflavin synthase	A0A2I2L4R9	Orpheovirus	2.0e-18	35.1
WP_040804324.1\|3789806_3790907_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	7.9e-41	32.7
WP_008252428.1\|3790936_3791413_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_008252429.1\|3791547_3792810_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	2.2e-103	54.9
WP_008252430.1\|3793022_3793232_-	hypothetical protein	NA	NA	NA	NA
WP_008252431.1\|3793625_3795287_+	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	3.1e-36	27.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014544

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection