CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014773	Mucilaginibacter sp. PAMC 26640 chromosome, complete genome	8 crisprs	cas3,DEDDh,WYL,RT,csa3	4	0	2	0
NZ_CP014772	Mucilaginibacter sp. PAMC 26640 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014773_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_1

437218-437445

Orphan

Consensus_repeat	Method
CCCACGCCGTCGTGCCGAATTTATTTCGGCATCTCATATGCTAGGTAACCAGCC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP014773_1

>merge|NZ_CP014773|1|437218-437445|PILER-CR
CCCACGCCGTCGTGCCGAATTTATTTCGGCATCTCATATTCTAGGTAACCAGCCTTGCGATCACCCGTCCTGTGGGGTGCCGATATGCATCGGCATGACGACTATTTTGAAGAGTAGAATTTATTTCGGCATCTCATCTGCGAAGTGGCCCGGCTCTGATCTCACCCACCCTACCCCACGCCGTCGTGCCGAATTTATTTTGGCATCTCATATGTTAGGTAACCAGCC

>NZ_CP014773|1|1|437218-437445|PILER-CR
CCCACGCCGTCGTGCCGAATTTATTTCGGCATCTCATATTCTAGGTAACCAGCC	TTGCGATCACCCGTCCTGTGGGGTGCCGATATGCATCGGCATGACGACTATTTTGAAGAGTA
GAATTTATTTCGGCATCTCATCTGCGAAGTGGCCCGGCTCTGATCTCACCCACC	CTACCCCACGCCGTCGTGCCGAATTTATTTTGG
CATCTCATATGTTAGGTAACCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067187583.1\|440081_440963_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187569
NZ_CP014773.1\|WP_067187576.1\|432200_433298_-\|carboxylate-amine-ligase	unknown	unknown	gnl\|CDD\|237406
NZ_CP014773.1\|WP_067187584.1\|440973_441900_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP014773.1\|WP_067187582.1\|439444_440008_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP014773.1\|WP_067187580.1\|437789_438407_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP014773.1\|WP_067187581.1\|438498_439266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067187574.1\|431145_431991_-\|GMP-synthase	unknown	unknown	gnl\|CDD\|153212
NZ_CP014773.1\|WP_067187588.1\|447494_448490_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP014773.1\|WP_157532006.1\|436974_437202_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067187579.1\|435906_436722_+\|esterase	unknown	unknown	gnl\|CDD\|366286
NZ_CP014773.1\|WP_067187573.1\|429861_431058_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067187575.1\|432000_432201_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_157532005.1\|429535_429688_-\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067187577.1\|433542_434613_-\|glutathione-synthase	unknown	unknown	gnl\|CDD\|223267
NZ_CP014773.1\|WP_067187590.1\|449574_451077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377873
NZ_CP014773.1\|WP_067187587.1\|446629_447256_-\|DUF4159-domain-containing-protein	unknown	unknown	gnl\|CDD\|379342
NZ_CP014773.1\|WP_067187589.1\|448570_449425_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP014773.1\|WP_067187578.1\|434729_435437_-\|esterase-family-protein	unknown	unknown	gnl\|CDD\|227283
NZ_CP014773.1\|WP_067187572.1\|426112_429472_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|200584
NZ_CP014773.1\|WP_067187585.1\|444204_446016_+\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|273597

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067187576.1\|432200_433298_-\|carboxylate-amine-ligase	gnl\|CDD\|237406	PRK13515, PRK13515, carboxylate-amine ligase; Provisional.	0
NZ_CP014773.1\|WP_067187584.1\|440973_441900_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.80857e-35
NZ_CP014773.1\|WP_067187582.1\|439444_440008_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.07329e-14
NZ_CP014773.1\|WP_067187585.1\|444204_446016_+\|translational-GTPase-TypA	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_CP014773.1\|WP_067187574.1\|431145_431991_-\|GMP-synthase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	5.08186e-13
NZ_CP014773.1\|WP_067187588.1\|447494_448490_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.76225e-92
NZ_CP014773.1\|WP_067187579.1\|435906_436722_+\|esterase	gnl\|CDD\|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	7.39323e-23
NZ_CP014773.1\|WP_067187583.1\|440081_440963_+\|NAD(P)H-binding-protein	gnl\|CDD\|187569	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs. PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.7205e-45
NZ_CP014773.1\|WP_067187577.1\|433542_434613_-\|glutathione-synthase	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	4.86278e-10
NZ_CP014773.1\|WP_067187590.1\|449574_451077_+\|hypothetical-protein	gnl\|CDD\|377873	pfam07584, BatA, Aerotolerance regulator N-terminal. These proteins share a highly-conserved sequence at their N-terminus. They include several proteins from Rhodopirellula baltica and also several from proteobacteria. The proteins are produced by the Batl operon which appears to be important in pathogenicity and aerotolerance. This family is the conserved N-terminus, but the full length proteins carry multiple membrane-spanning domains. BatA ensures bacterial survival in the early stages of the infection process, when the infected sites are aerobic, and is produced under conditions of oxidative stress.	1.41425e-15
NZ_CP014773.1\|WP_067187587.1\|446629_447256_-\|DUF4159-domain-containing-protein	gnl\|CDD\|379342	pfam13709, DUF4159, Domain of unknown function (DUF4159). Members of this family are hypothetical proteins.	2.69401e-68
NZ_CP014773.1\|WP_067187589.1\|448570_449425_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.11934e-28
NZ_CP014773.1\|WP_067187578.1\|434729_435437_-\|esterase-family-protein	gnl\|CDD\|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	2.08452e-61
NZ_CP014773.1\|WP_067187572.1\|426112_429472_-\|glycosyltransferase	gnl\|CDD\|200584	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins. This family includes many uncharacterized bacterial proteins containing an N-terminal GH18 (glycosyl hydrolase, family 18) domain, a middle NodB-like homology domain, and a C-terminal GT2-like (glycosyl transferase group 2) domain. Although their biological function is unknown, members in this family contain a middle NodB homology domain that is similar to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily. The presence of three domains suggests that members of this family may be multifunctional.	8.10621e-87
NZ_CP014773.1\|WP_067187580.1\|437789_438407_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.50198e-13

>NZ_CP014773.1|WP_157532006.1|436974_437202_+|hypothetical-protein
MKSRIYFGISSAKWPGSDLTHPTPRRRAEFISASHLLGNQPCDYPSCGVPICIGMTTILNGAEFIPASHLLVARL
>NZ_CP014773.1|WP_067187579.1|435906_436722_+|esterase
MYRYGTTTEMIITRQELTIQSTVLNRNVTCTLMLPSEEGVVEPLHLLLLNDGQEIDNLGLTDTLEHLYSRNCLKPLLIVAISAGEERIQEYGIAGKPDYKDRGSKADRYTQFIKTELLPAIHAETGIDQFESTAFAGFSLGGLSAMDIAWNNPNLFNKVGAFSASFWWRNKDLVKGYTDADRLMHAQLRETAGKPDLKFWLQTGTKDEIADRNKNGIIDSIDDTIDIIIELENKGYTRPADIQYLEILGGKHDCETWGKAMGKFLCWAFGK
>NZ_CP014773.1|WP_067187578.1|434729_435437_-|esterase-family-protein
MKEQYHRWYSPNVNMDLEMLVFGDRGYPVILFPTTKGRFHQNKDFGLVEGVRWFVEEGLVKIYCPDTIDDRSWYDKGIHPADRARNYARYDKMLLDELVPWAQHETGVGRVAMAGCSFGGYHAANFAFKHPEKVAHLFTMGGAFDIKMFTDGYHDENVYYNNPVDFIPGSNNEWLWRMNIILCTSEHDMCKGYNIEMSNILRAKNINHWLDIRPDANHDWPIWKEMFPHYLSTIK
>NZ_CP014773.1|WP_067187577.1|433542_434613_-|glutathione-synthase
MKKIGILFGQENSFPQAFVDKINEKAEKNITAEFVRIDKMMQGEPLGYSVIVDRISQDVPFYRASLKNAAITGTAVINNPFWWSADEKFFNNALAVKLGVPVPKTVLLPSKDHPDSTTDRSFRNLAFPLDWDAIFNYVGFPAYMKPFDGGGWRDVYKIADKEDLWEKFAQTKQLVMLLQEEIIFDDYFRCYCIGGKHVRIMQYEPRNPHHLRYEHGKAPASKKMLDTITKYVLQLNQYLGYDFNTVEFAVRDGIPYAIDFCNPAPDAEVTSVGQDNFEWVVETSASYAIERAKAQKADRDNLTWGEYVRAGIAGKPLVAAAKAAIAEDVSVATIEEPKPKKAKAAVKEAAPKKSKK
>NZ_CP014773.1|WP_067187576.1|432200_433298_-|carboxylate-amine-ligase
MNNFTLGVEEEFMVIDPVTRELKSHQQKIVDGAQKIHEDQVKAEMHQAVVEVGTHICQNTDEARREVTKLRGTVAQLAGDLGLRIGAAGTHPFSHWQHQLITDHPRYFEIVDELQEAARSNLIFGLHVHVGIQSRDMAINIANQARYFLPHVYALSTNSPFWEGRNTGYKSFRTKVFDKFPRTGIPDYFASIEDYDNYIKLLVKTNCIDNAKKIWWDLRVHPFFETIEFRVCDCPMLIDETMTMVALFQCICAKLYKLRLSNMKFITYNRALINENKWRAARYGIDGKMIDFGKELEVNTRALILELLDFIDDVVDDLGCRDELQYVHKILEHGTGADRQLAIYNQNNKFEDVVDYITSQTLKGI
>NZ_CP014773.1|WP_067187575.1|432000_432201_-|hypothetical-protein
MDIQSFEGLQLKLNDGITLRKENGEEIKGFYMGEYNAGGKTFAFSNFVNGSVEVILIEQLQQLIKG
>NZ_CP014773.1|WP_067187574.1|431145_431991_-|GMP-synthase
MNTEKPEIKIAILDLYDGVANEGMRGFREILERYKAKHSLNLSYEVFDVRRKAQVPGIGFDAYISSGGPGSPIDSDGTEWEKKYFRLIDKLEDHNLGNSGKKKHAFFVCHSFQLMCRKYALGDINTRRSPSFGILPVHLTGEGKHDPVFQGAYDPFYTVDSRSWQVINPDKKRFDELGMTILAVEKERPYVDLPRALMAIRFTNEFIATQFHPEADPHGIKTMLLREDKKDEVINEHGEAKYKEMLQRLDDPDKIAHTQSTIIPNFLDGAILGLSSSSMPS
>NZ_CP014773.1|WP_067187573.1|429861_431058_-|hypothetical-protein
MNSSLRIPFNQHFSEEKYAEFLLSLNDGLKKPIEFRIAETPVFLTDDFRDKLVQAGDEIVATILKADFKELSERAIPGKWRVPNENDHPHFIALDFGVCKDGAGNIVPKLIELQGFPSLYGFQVHLGENYRHAFNIPGNQTVFFNGMDKSAFIALLRQTIVGPYQPEEVVLMDVDAPNQKTAVDFYITQRYIGTPVVSLADLIQEGRQLFYVAANGEKKRICRIYNRLIFDEIESDPDIFKKVVDIRQPLDVEWIAHPNWFYRISKFTMPFLHGNYIPKTQFLNEVNIIPEDLHNYVLKPLFSFAGQGVIIDIMDGDIEKIADPENWILQEKVNYEPVLQSPDSGVKVEIRLLYLWPDGAKKPTLAINLARLSKGKMIGVRYNKDFDWVGGTVAFMHR
>NZ_CP014773.1|WP_157532005.1|429535_429688_-|FeoB-associated-Cys-rich-membrane-protein
MNIQAIIIIILFIAALFYIGRLFYKMLFAKKSCGSNCKCGVDFSALEQNK
>NZ_CP014773.1|WP_067187572.1|426112_429472_-|glycosyltransferase
MSNKQVFQADSPGRWNRFKWLSRFFLVLVIFGAVAAAITITSTEYPLLPNLDPAPKKISKEDLDALKKSKRYKDFKIEKAEIQQLARARHLHQLKHPNNANRINAGFYRPWEPQAYNSLQQYIQHLDMVVTEGFGFSQKSDTLKVQIDTGLINLNKKYKKQILVTLNNYDNIKGGYDVAEVEHIFASKKLRTAFINSLADKLDHYKFQGINVDLDDVKDRNSKHFIAFQNELYATMHARGFLVTQNVVAEDEEYDLKRLQHVNDFIFVMAIDQHYDGSNAGEISNQHWVEEILDNVCTTIPSEKVILTFAAGGYDWPENSIGVAAGYQQALSTAKQKKSKIIFDPVSANLHFNYLGNDGFNHIIYFTDAATNFNIIRQADDWATGGVALWRLGAEDPRLWTFFQKNLSIDSLKKTGVDIKRLTTVGLNDKIDYAGEGGEVLDLITQPATGKIDVKLDPKTFTITNQQYIDLPSKYVIRRYGLKPGKVVLTFDDGPDPDFTPRILDILKRENVPASFFVVGSMAEKNIPLLKRIYDEGYEIGNHTFFHPDISTVSIERVNLELNSTRKLIESVTGRSTILFRPPFNADAEPQTRAEVIPVAESRRQSYITIGESIDPWDWQPGVTADSIVARAIKQKDNGSMILLHDAGGDTREETVKALPEIIHYFKSHGYKFTTIADILDKTKDDLMPLPTSDDKTVWGRFYDVAIVGFFLGNKFIFYLFLSAIFLAIGRIVLIGILAVRQFYEDKKIRVEPTDLPAVSIIVPAYNEEVTAAATIDSLLKLEYPNFEVIFVDDGSKDNTYENVKAAYENHPLVRVLTKTNGGKASALNFGISHANSDYVVCIDADTQLRSDAIYQLMSYFTDEEIGAVAGTVKVANETNIVTRWQSIEYITAQNMDRRAFDLINSITVVPGAIGAFRKSAIFRAGGFTYDTLAEDCDLTMRILKLGYIVKNSAEAVAYTEAPETLNMLLKQRFRWSFGVIQSFWKNRDALFNKKYKFFGMVGMPNILIFQIVLPLFSPLADLMMIFGLLGDKPEKIIVYYVLFVVIDFLVAIIAFKMEKESYKKLIYIIPQRFIWRQLMYYILFKAIRKAMKGELSGWGVLKRTGNVTIKKEDLVGDE
>NZ_CP014773.1|WP_067187580.1|437789_438407_+|TetR/AcrR-family-transcriptional-regulator
MTIADRKVKDKEHLKTLILNSARRLFVEKGVAQTTIRSIAQHIDYSVGTVYIYFKDKNAILNELHIQGFAQLSGKFDVLRHVADPMERLIAMGRLYINFALENPDMYDLMFSLKAPMEVINDAKEEDWKEGTNAFAFLKATVEQCISQHHFKGHQPEPLTFMIWGLVHGMCSLHISDRANGVRLSNADKIVQAGFEEFVTILKKL
>NZ_CP014773.1|WP_067187581.1|438498_439266_+|hypothetical-protein
MNSFLITLKFRNEPLFIFGLLCFITAIALAVASRANPFQVAGTNAWYKPVKFALSIGIFCWTMGWFTGYLNLPWQVTIYNWVTISVLGFELVYITWQAARGQLSHFNRSTPLYAALYGAMAFAASAVTLHTAYIGLLFCTKTFPQLPDYYLWSIRLGIFLFVIFAFEGAIMGGRMAHTIGGPDGSGGLPFLNWSRRFGDPRIAHFIGMHALQVLPLLAFYLLKDVKLTWLAAVVYGVIAMLLLAQALNGRPLVRA
>NZ_CP014773.1|WP_067187582.1|439444_440008_+|Crp/Fnr-family-transcriptional-regulator
MKEFADFIRSKIAVEDQEMEIILSNFKIKKVKKGQLVLKRGQIAQQYFFIKSGALRFFFGQFDDQLTAWVVFQNEFFTEISSLNPQKPTRFNIEAIEDTELIYIDKPEMERLYKQLPAWQEFGRITWEAMAVRMIDQIISFQTLSAEERYLEFMAKTEMIKRVPVKQIASYLGITPNALSRIRKNVK
>NZ_CP014773.1|WP_067187583.1|440081_440963_+|NAD(P)H-binding-protein
MKKPILVAGATGNLGHKICRALIKQNVPVRALVREGSDPEKIKALEQLGVDVFKVNLSNEQELIGACNGVSCVISALAGLHTVIIDAQTKILNAAVAAGVPRFIPSDFSTDFTLMPSGENRNFDLRKEFEETLNKSPIRATSIFNGAFADILRYNTPLFNTKTKSVAYYEDKADWKIDFTTMDDTAAYTAMAAMDANAPRSLRIASFRVSPNDLISLSEQHKGSKFQLTAMGSMENFSAYNKTQRAAHPDGENELYPKWQQAQYLYSMLLVHHPGLDNNRYDVLNWSSAESNI
>NZ_CP014773.1|WP_067187584.1|440973_441900_+|alpha/beta-hydrolase
MNNEELKVTDPYSDEELIKQWPGFENKYATVNGVDLHYVEGGSGKPLICLPGWPQTWYSYRNIAPALAENYRVIVVDIRGMGTSGKPESGYDKKTMAKDIYELIRQLGLEKVHLLGHDIGGMVAMSTAFNYPESIDKLVIMDGAHPSEGMLKMPLIPALGTFKEKMTGEAQYVWWMGFNQVKGLPEQLLEGRFRYLLDWLFAYVMIDETKLSTFEREVYTSVYNEKENIRASNAWYQSFTQDIEDGKTYQPLTMPVLGIGSNVSYNFMKMGLPYVAKNCNVVGMLESGHYMNEEHPEKVLEIIKPFLN
>NZ_CP014773.1|WP_067187585.1|444204_446016_+|translational-GTPase-TypA
MQKIRNIAIIAHVDHGKTTLVDKILHSCAIFRDGQETGELILDNNDLERERGITIVSKNVSVMYKDVKINIIDTPGHADFGGEVERVLKMADGVLLLCDAFEGAMPQTRFVTQKALALGLKPIVVVNKVDKENCRPEEVYEQIFELFFNLEATEEQLDFPVIYGSSKQGWMSTDYKKPTEDIFPLMDAILENIPPAPINEGTLQMQITSLDYSSFVGRIAIGRVARGTVKENQPVSLVKRDGTIQKTRIKELYTFEGLGKVKATSVNAGDICAVVGIEGFDIGDTIADFDQPEQLAVIKIDEPTMNMLFTINTSPFFGKEGKFVTSRHLRDRLYKEMEKNLALKVVETESPDSYLVYGRGILHLSVLIETMRREGYELQVGQPQVIIKEIDGVKCEPVETLIVDVPGEVAGKVIELVTQRKGDLLVMEPKGDLQHLEFDIPARGIIGLRNNVLTATGGEAIMAHRFKAYEPWKGQIPGRANGVLVSMDTGKTTAFAIDKLQDRGRFHIDPGTDVYEGQVLGEHIRDNDLVINLTKGKQLTNMRASGSDTNVRIAPAIKFSLEESMEYIQADEYIEVTPLSIRMRKIYLNENERRINAKKFQAQ
>NZ_CP014773.1|WP_067187587.1|446629_447256_-|DUF4159-domain-containing-protein
MAYGSKFTFTRLSYHSGDWDTDQRMPSNLLNSLVEYTTIPIDPHEKVIPLSSDEIFNYPFCYLSGHKLVQFDAQEKANFKKYIQNGGFVLVDDCNHDIDGLFAKSFEAQMAALFGPAALKKIPNNHKIYHSFFAFDKGPPTTTFELNGWGDDLVHDYLKAIEINGRIGVLYSSKDYGCEWDYDFRNKRFLAEDNTKFGVNIIVYALNS
>NZ_CP014773.1|WP_067187588.1|447494_448490_+|MoxR-family-ATPase
MELTENNIKALLAKLPKLKDEIQKVIVGQDHILDELLVAFLAGGHCLLEGVPGLAKTLIVKTMSQALHLSFRRIQFTPDLMPTDIIGTEILEEDHATGKRFFKFNKGPLFANIILADEINRTPPKTQSALLEAMQEFEVTYGGQTYPLDKPFFILATQNPIEQAGTYPLPEAQLDRFLLLIKIGYPTEQEEFAILNRTTGTKKADVQAVITAEEITQAQALVRQVTINEDLTRYVSQVIRATRPDTTEVAYVKEWVRWGAGPRAGQALILTAKARALLKGRYSVLMEDIHAMAPAVLRHRILTNFKAEAEGITSDRVTEELIKVIERKTGR
>NZ_CP014773.1|WP_067187589.1|448570_449425_+|DUF58-domain-containing-protein
MTIKDLPLLAKTVIDGFMNGFNKSTVKGPGLEFSQYRSYQPGDDLRWLDWRMFARSDRYYIRESEVETSISVRFLVDASASMNHDDNGVKKIDYARFLAASLAYLANLQGDSVALNIFKDGELFSLPSKPDPQHLQRLFHHLQQVEAGGTFTKPVHYKELFAGNGRKELLVFVTDMYQADGEINALLSTLAALKHEVIVFHLMGQNELDFDFKGYSTLEDLETGETIQVNTQRARDTYKERLQQHLTDIRSELLSKRISYRMLSTAQPLDEALRDFLIQRKKGI
>NZ_CP014773.1|WP_067187590.1|449574_451077_+|hypothetical-protein
MTFLSPIWFFALAALSIPVLIHLWNIRPGKTLKVGSISLITEASKNTSRSFKLMDLLLLLLRCLLLALAALFLASPVWLRNPESDKAKGWVLLPRENLKESYQKFKSRVDSLTKAGFELHYFNTGFLKIDTAKLPVIAPDTTGNAGTANYWSLIKQLDKQVSASLPVVVITPNNQHHFSGKKPSVNLNLKWQTYTAADSTSKWIAGAWFTANNAIKVTVGNSGPAGTYFTDKYIRNDGDAELTANVQNGQPVVNLKATGSTPVIVDTATLRIAVYTDQYALDANYLTAALNAVLTFRGGRAIVKQYRHPEQIPGGQTWLFWLSDAPLNSQATQKAGHTFKYEPGKVSNVSTWITATKRNALPNSEQKISLAKLIGTTQNNTAIWQDGFGRPVLSLENQHSIYHLYTHLNPAWTDLVWNDDFPKMILKLIESDPQALPAKYDKRTLSDEQLQPHKITEIKETATVKPIQKTDLSKYFWLLLIIIFIAERWLAHKTKTTVND

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Crispr_ID: NZ_CP014773_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_2

941421-941519

Orphan

Consensus_repeat	Method
TGTCCTGTGGGTTCCCGAAACAAGTTCGGGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014773_2

>merge|NZ_CP014773|2|941421-941519|CRISPRCasFinder
TGTCCTGTGGGTTCCCGAAACAAGTTCGGGATGACGGCGGGAGTAGGGAATGCATGCTGGGGGCGTGTCCTGTGGGGTTCCCGAAACAAGTTCGGGATG

>NZ_CP014773|2|1|941421-941519|CRISPRCasFinder
TGTCCTGTGGGTTCCCGAAACAAGTTCGGGATG	ACGGCGGGAGTAGGGAATGCATGCTGGGGGCGT
GTCCTGTGGGGTTCCCGAAACAAGTTCGGGATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067188142.1\|957945_960162_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_CP014773.1\|WP_067188123.1\|949469_952049_-\|ligase-associated-DNA-damage-response-DEXH-box-helicase	unknown	unknown	gnl\|CDD\|274994
NZ_CP014773.1\|WP_067188090.1\|932070_933348_-\|porin	unknown	unknown	gnl\|CDD\|335962
NZ_CP014773.1\|WP_067196873.1\|947880_949260_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223222
NZ_CP014773.1\|WP_067188139.1\|957282_957846_+\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
NZ_CP014773.1\|WP_082800214.1\|940377_940653_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368828
NZ_CP014773.1\|WP_067188126.1\|952124_952397_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_157532034.1\|935151_935526_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_157532035.1\|940704_940848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067188129.1\|952478_954011_-\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|365897
NZ_CP014773.1\|WP_067188148.1\|960442_961213_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP014773.1\|WP_067188152.1\|961296_962598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_082800215.1\|954074_954542_-\|BLUF-domain-containing-protein	unknown	unknown	gnl\|CDD\|377423
NZ_CP014773.1\|WP_157532295.1\|936274_938470_+\|DUF2075-domain-containing-protein	unknown	unknown	gnl\|CDD\|378274
NZ_CP014773.1\|WP_082800213.1\|939744_940203_-\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|225408
NZ_CP014773.1\|WP_067188093.1\|933408_934053_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP014773.1\|WP_067188096.1\|934111_934351_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NZ_CP014773.1\|WP_067188136.1\|954695_957017_-\|glycoside-hydrolase-family-3-protein	unknown	unknown	gnl\|CDD\|224389
NZ_CP014773.1\|WP_067188114.1\|938782_939739_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_CP014773.1\|WP_067188107.1\|935945_936275_+\|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|212144

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067188142.1\|957945_960162_-\|GAF-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	0
NZ_CP014773.1\|WP_067188123.1\|949469_952049_-\|ligase-associated-DNA-damage-response-DEXH-box-helicase	gnl\|CDD\|274994	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated. Members of this protein family are DEAD/DEAH box helicases found associated with a bacterial ATP-dependent DNA ligase, part of a four-gene system that occurs in about 12 % of prokaryotic reference genomes. The actual motif in this family is DE[VILW]H.	0
NZ_CP014773.1\|WP_067188090.1\|932070_933348_-\|porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	1.09147e-34
NZ_CP014773.1\|WP_067196873.1\|947880_949260_+\|hypothetical-protein	gnl\|CDD\|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	2.69044e-65
NZ_CP014773.1\|WP_067188139.1\|957282_957846_+\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	7.16243e-60
NZ_CP014773.1\|WP_082800214.1\|940377_940653_+\|hypothetical-protein	gnl\|CDD\|368828	pfam06291, Lambda_Bor, Bor protein. This family consists of several Bacteriophage lambda Bor and Escherichia coli Iss proteins. Expression of bor significantly increases the survival of the Escherichia coli host cell in animal serum. This property is a well known bacterial virulence determinant indeed, bor and its adjacent sequences are highly homologous to the iss serum resistance locus of the plasmid ColV2-K94, which confers virulence in animals. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	8.95285e-09
NZ_CP014773.1\|WP_067188107.1\|935945_936275_+\|nucleotide-pyrophosphohydrolase	gnl\|CDD\|212144	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in mouse RS21-C6 protein and its homologs. RS21-C6 proteins, highly expressed in all vertebrate genomes and green plants, act as house-cleaning enzymes, removing 5-methyl dCTP (m5dCTP) in order to prevent gene silencing. They show significant sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, RS21-C6 contains a single MazG-like domain and functions as a tetramer (a dimer of dimers) with a typical four-helical bundle. Divalent ions, such as Mg2+, are required for its pyrophosphatase activity. This family also includes a pyrophosphatase from Archaeoglobus fulgidus (Af1178). Although its biological role remains unclear, Af1178 shows significant sequence similarity to the mouse RS21-C6 protein.	3.70418e-31
NZ_CP014773.1\|WP_067188129.1\|952478_954011_-\|carboxylesterase-family-protein	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	3.81993e-128
NZ_CP014773.1\|WP_082800215.1\|954074_954542_-\|BLUF-domain-containing-protein	gnl\|CDD\|377423	pfam04940, BLUF, Sensors of blue-light using FAD. The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.	9.62422e-35
NZ_CP014773.1\|WP_157532295.1\|936274_938470_+\|DUF2075-domain-containing-protein	gnl\|CDD\|378274	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075). This domain, found in various prokaryotic proteins (including putative ATP/GTP binding proteins), has no known function.	2.11433e-54
NZ_CP014773.1\|WP_067188148.1\|960442_961213_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	3.51093e-79
NZ_CP014773.1\|WP_067188093.1\|933408_934053_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	4.20096e-30
NZ_CP014773.1\|WP_067188096.1\|934111_934351_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	5.93238e-12
NZ_CP014773.1\|WP_067188136.1\|954695_957017_-\|glycoside-hydrolase-family-3-protein	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	3.19283e-45
NZ_CP014773.1\|WP_067188114.1\|938782_939739_+\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	2.61798e-33
NZ_CP014773.1\|WP_082800213.1\|939744_940203_-\|DUF559-domain-containing-protein	gnl\|CDD\|225408	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination, and repair].	3.24952e-07

>NZ_CP014773.1|WP_157532035.1|940704_940848_+|hypothetical-protein
MNPVTAIVPVQDLGLANVSKRLQPKTSSKDGNLSYEVAALSLAMTGW
>NZ_CP014773.1|WP_082800214.1|940377_940653_+|hypothetical-protein
MAKPLPTGLRAAPARQPVIAIIAICITFTSCYTYLTIAGKGPQGNESVTHKNHYLIDGLVTLKTSDLKAMASDAKDYTVTTQHTLWRVSGR
>NZ_CP014773.1|WP_082800213.1|939744_940203_-|DUF559-domain-containing-protein
MNCLECDCSIPEVVYRYSIKNIGIPLCRNHQDWIRGHQATPQAIHLYFLLKQNGVPAELEKHDGYKSVDIVVEEAKVHIEVDGGHHNYSHRQALADLKRTYHAFKKGYVTLRIPNSLVHQCPEETADTITEILEINLNRQPRKAFSFFNVFK
>NZ_CP014773.1|WP_067188114.1|938782_939739_+|HNH-endonuclease
MVLLNKFISKLTRLNRANTVYGKAPHKPVLLISIIELIEKGIIIDNQIYVDTNLVGSFCENWQLLVSTLHHEDFTQPFYYLQSEKIDGQGFWFLKTKPGCLVNAYIRSVNTLANVIAYGYFADDIYLLLCDKSSREMIKAVLLETYFAGTKDAYLQNKQTGDGYLHNLESYILNEPEVKYRSAIVETEEEQFVRGGLFKRLVPKVYSSTCCITGMQLQSHHGHSFIDACHIVPFSLTHDDTVSNGIALCPNLHRAFDRGLVSIDNDYKVMVSGQVMESSDHPYSLQHLNGVKIKLPAQSWHHPEQANLDWHRGNVFKR
>NZ_CP014773.1|WP_157532295.1|936274_938470_+|DUF2075-domain-containing-protein
MPVAGFEIKRYDFNSNLFSSFQHTHFATDLWPIVYIISDGAVKEAYVGETTDTYARMTAHLKSHTKSVLSTVHLISSEKFNKSATLDIESNLIKYISGDGQYKLLNGNIGLANHNYYQKKEIYWDLFKAVWNKLRAEGITKHSIEHINNSDLFKYSPYKTLSNEQKEGLMTIITALLNNNFKNVIVEGGAGTGKTILAIFLFKLLHSKNEDFNYKEFGDDESDFIKAVIELKKRFPNPKMALVVPMSSFRNTLKKVFKNIKGLNANMVIGPADLKDQRFDIVVVDESHRLRRRVNLGAYFRAFDVACEKLSFDKNTCSELDWVKKQSDRAILFYDEGQSIKPSDARKEDFDRLKLLPSTKIEALKSQFRVKGGNGYVDHISNLLNNNPPLQKVYLSKDYEFVLFDSIEAMVKEIKLRDEESGLSRTVAGFSWPWVSKKDKTVYDIEIDGYKLKWNSVSIDFINSANAVNEVGCIHTTQGYDLNYAGIIFGNEISYDKNKDEIVIVKENYFDENGKRSILDPFELKKYILNIYKTMMLRAIKGTYVYVCDKNLREYFAGHIEKATATISPTNYLPLTNVIPFVNSVPVVNLKAAAGNFSELQIADTNAEDFEWVEIPARYKPSKDLFACRVIGESMNKIIPNGSLCLFRKDGGGSRNGKIVLVEYTSIQDPDFGSSYTVKEYTSQKRESDGQWSHQLIILKPLSYSSEYSDLEISDDELAYLKVVGIFECVL
>NZ_CP014773.1|WP_067188107.1|935945_936275_+|nucleotide-pyrophosphohydrolase
MSELKELQKKFIDFRDERDWAQFHNAKDLALALSIEAAELNELFLWKKAEDVNIEKVKDELADVFGYALLIAEKFDLNISEIITNKITKNNEKYPVSKSKGSAKKYNEL
>NZ_CP014773.1|WP_157532034.1|935151_935526_+|hypothetical-protein
MIKNRAMEDFTVKMDGGVTIIESHKRQFRMSVQKDRQVNADRNTALMDATLYKEQGSFVRDCSYIFEALNIHNEPLVSVDIELFKNAVDFFFTSVLGTDLYVKSIPRSSSLCGQHLKAFQFDIR
>NZ_CP014773.1|WP_067188096.1|934111_934351_-|helix-turn-helix-transcriptional-regulator
MKNLLNIKVKAVAANIRIKREELNYTQEYLAAKLNISQNAYSKIELGYTKITLERLFQIAEVLDADLIELIKTESEQAA
>NZ_CP014773.1|WP_067188093.1|933408_934053_-|HD-domain-containing-protein
MSNADIIEKTTAFVQETLQNAEGGHDWWHIQRVHINAQKLAQTEACDLLVVELAALLHDIADSKFHNGDEEIGPRTAGDFLTAIGVDEPIVVHVQQIIRHMSFKASFDKVTFHSPELAIVQDADRLDAIGAIGIARAFTYGGFKNREIYNPELKPNLNMSKEEYKNTTAPTINHFYEKLLLLKDKMNTATGKQMALQRHEFMETYLDQFYSEVQ
>NZ_CP014773.1|WP_067188090.1|932070_933348_-|porin
MAIGQFCHAQDTLKQQRFNFHFQQTVITQFKPAFSAAYTGNNSLLTGKETQSSITTTFFGGARLWKGASAFFNPEMSGGSGLSKTLGVAGFPNGETFRVGGAEPKIYIARLYLSQNFEWGNEKDTLPDNGKSLAGLRSKRYLNFTIGKFGMADFFDGNEFSHDPRSQFMNWSLMDNAAWDYPANTRGYVMGAMAELGQPSWALRFAFTMTTTSANGAIWDERIAHANTQTLEYEKRYQVNGRNGNVRILGFRNNGKMGNYRLALAQNPVNPVVDTNLTYGKHKYGFGISADQYLSKYFGVFAKLSYNDGKTETWAFTEIDRSLSFGAVLRGGKWHRKDDELALAFVANGISGPHRDYLAAGGYGFIIGDGKLNYAHELIAELYYKINAYQGKLWLTPDYQFIANPAYNRDRGPVNVFSLRAHVEF
>NZ_CP014773.1|WP_067196873.1|947880_949260_+|hypothetical-protein
MDNYTFPPNFLDSLTNEPGFDRTNFVREHESGATITSIRMNPFKASAAKSDKRVPWCAEGFYLDTRPSFTFDPLFHAGAYYVQEASSMFIAHILNFIRPEKDEPIKVLDLCAAPGGKSTLLNSALESTDLLVANEIIKTRVPILTDNLSRWGTSNVIVTNNDPKDFNAIHSFFDVVLVDAPCSGSGMFRKDAAAMNEWSEGNVNLCHQRQERILADIYPALKEDGYLIYSTCSYSHQENEDILDWLCTEFDLESVRIPIDKEWGIVETQSAVKGAWGYRFYPGKVQGEGLYASCLRKKASSGGLSNYKNNGQQKLPAKEMDLVKMYLKSPDDFYLFKVNDDWLAMNREHKESLNILHRHLYIKKSGVRIGKLAGNDLIPDHELALSLAINKDKVLITDLTKEQAIQYLRRDHIAIEVTEKGWSLMAYEGLALGWAKLLPNRINNYYPKEIRIMTSPPTA
>NZ_CP014773.1|WP_067188123.1|949469_952049_-|ligase-associated-DNA-damage-response-DEXH-box-helicase
MVTKGQQVIQTWYKQKQWKQFPFQKEMEEAYLSGFSGLLNAPTGSGKTFALFLPFLAGYINQNPDTYQTKSNNGLQMLWITPLRALTNDIRKAMQEVCDELGMPWRIMTRTGDTSAADKAALKKRLPEVLLTTPESLHLMLAQKEYDKVFKGLQVFVCDEWHELLGTKRGVQVELGLSKLKVLASPTAGGALPVSDVKSQISNLKVWGISATIGNLEQAAEVLLGNDFPPERIKMVRANIEKRLLIESVIPENIENYSWAGHIGVKLLPQVMKIVAKSKTTLIFTNTRSQAEIWYHAIIDNYPEYAGIMAMHHGSLDNELRNWVEQALHAEALKVVVCTSSLDLGVDFRPVDTVVQVGSPKGVARFMQRAGRSGHHPGAISKAYFVPTHSLELLEGAALKQAIKNGVFESRDPMLLTMDVLIQYMVTLAVSDGFRADELYKEVKSTFAFADLRRDEFNQLLDFITNGGKTLAQYDEFLKVEVENGLFKVNNRRVAMRHRLSIGTITSELSIRVKWLSGGSLGTLEEGFIAKLKPGDTFWFAGRSLEFIKVKEMSAFVKKSTKTKGLIPSWAGGRMPLSSQLSAVFRDKLDEVAHGIEADVEVKALKPLFDLQKKLSHLPESHEFLIESFKSREGHHLLFYPFEGRLVHEGMASLLAYRIAKIRPSSFSIAMNDYGFELLTDEDIPIEEALEDASFFSIDNLIDDIQNSLNANEMARRRFRDIAHIGGLIFTGYPGQQVKNKHLQASTSLLFEVFNEYEPDNLLVRQAYNEALAFQLEEFRLRAALQRIQTQSIILKTIERPTPFAFPILVDSMGREKLTTETMEKRIAKMARRYDVDESDAEKIAPKPRKAGVTRRKGF
>NZ_CP014773.1|WP_067188126.1|952124_952397_-|hypothetical-protein
MVLTFEFLKVFNVHSCGQYILARLSNGIAGFEMKEGASFGGIAIDTYIEMPRIIGGHDEPHLDLFVFRPLNLLNKDEFIEGQPAELIIPD
>NZ_CP014773.1|WP_067188129.1|952478_954011_-|carboxylesterase-family-protein
MKRLLLLPLILFAAGVMAQSLPKVIKTDAGLLSGSMNADETISVYRGIPFAAPPVGDLRWKAPQALKPWSGVKTCTDFSKMPIQGKPNEFGVYTREFLIKDEALSEDCLYLNVWTGAKSPAEKRPVIVWIYGGGFGSGGTNVPIYDGEALAKKGVILVSVNYRVGVLGFLAHPELSAESPNHASGNYGLMDQLAGVKWVKNNIAAFGGDPNNVTIAGQSAGSMSVNYLVASPLGKGLFKRAIAESGAVFLDGPFGGVNLKQAEEEGVKTASRLGAKSLADLRKLSTYQLLKQNGGRPIIDGYVVPQSISAIFAAGKENQVAVLTGWNTDDAFIGKLKSAAEYKADIEKRYPADAAAYLKNYPGNTDAEAERSQINISRDITFGVQNYTWANVQSTKGTAKVYLYRFTRRLPATEDFKKYGAFHTGEVGYVFNNLKFLNRPFEPVDQQLADQISSYWVNFAKTGNPNGNNLPVWPAYNTTGKQVMILGEKPAATTLPDDAALKFMVKQTIR
>NZ_CP014773.1|WP_082800215.1|954074_954542_-|BLUF-domain-containing-protein
MFYIIYMSKAVKLMQEEDLNAVLKESRDWNKTHELTGMLLYIRGHILSHIEGRFIQVIEGPEDEVKYIFERINKDKRHQAITVLKQGVIKKRNFENWQMGFESLFTEEFEAKEGHFELNDAFLESGKLQRLNVALSFLKSFYNMSLPKKDEADVA
>NZ_CP014773.1|WP_067188136.1|954695_957017_-|glycoside-hydrolase-family-3-protein
MSKKYLLLIAILPVMASAQTKFTETKNGDVVTVANSGGQKLGYSATSGVKILTVGGLAFKDLNKNGKLDKYEDWRLPVEVRAKDLAAKMSVEQIAGLMLYSRHQPIPSAPAGPFAGTYGGKVFAESGANAWDLSDQQKKFLKEDNVRHVLITSVQSPEVAAKWNNNAQAYVEGIGLGIPNNNSSDPRHGTLATAEFNAGAGGNISMWPGSLGMAATFDPSVTQNFGHIAAQEYRALGIATALSPQVDIATDPRWNRFSGTFGEDPQLSADMARAYTDGFQTSTGDKELANGWGYNSVNAMVKHWPGGGAGEGGRDAHYGFGKYAVYPGNNFAQHMIPFTQGAFKLNGKTGMAAAVMPYYTISWKQDTKNQENVANNYNKYIITDLLRNKYHYDGVVCTDWLVTGDETVLNSFLSGKSWGMEKATIAERHYKILMAGVDQFGGNNDMVPVMAAYQMGVKEHGEVFMRARFEQSAVRLLRGIFRTGLFENPYLDAEATKKTVGSPEFMAAGYQAQLKSIVLLKNKGGVLPLQTGKTVYVPKKFTPAGVNFLGMKTPERLEYPVNMETVKKYFKVTDNPDEADYALVFIASPIGHGGYSADDVKAGGNGYLPVSLQYGPYTATTARATSIAGGDPLETFTNRSYKDKSETTTNVTDLAMVNDTYAKMKGKPVIVSVNVNNPMVFTELEKQASAIIADFGVQGQASLDILTGKAEPSALLPLQMPADMITVEAQFEDVPHDMKVFVDSEGHKYDFGYGLNWKGVIKDARTAKYNLKP
>NZ_CP014773.1|WP_067188139.1|957282_957846_+|biliverdin-producing-heme-oxygenase
MLADKLKEETKINHQILEKALVGNLKAIRSETEYADLLKLFYGYFGGLETRINEFIDTGLLPDSHQRRKTAALGHDLEDLGSDLPAKASGEWLPTIKMHLQALGALYVIEGSTLGGKIISKMMQQHLGLTDKGLSFFAGYGEQTEQMWDTFKEVLNQQAQNPEEEAVVIAAANETFLKFGEWFSSKH
>NZ_CP014773.1|WP_067188142.1|957945_960162_-|GAF-domain-containing-protein
MSSFLVDLTNCDREPIHIPGKIQSHGFIIVIDRKCIVRFHSENLVEFMDDIPANILGVHINTIEALVGNNESPDFIGQLINLGKVNGFEQINPFKTDVNNMPFHLIISTAGDYYMLEFEPARSDSSSDVQRMIGRSISEMLADKNLQNLLNNSAIQVKNIIGYDRVMIYRFAEDGHGEVVAESKTEELPSWLGLHYPASDIPKQARELYKHNLTRLIADIHTVPSAIIAEDNAGGIELDMSNSSLRAVSPIHIQYLKNMGVDSSFSISLIYKKELWGLIACHNYSPRFIDYRQRESAKLIGQILSSALEFRQDEENQQIQEKYKSTVDQLSRLMLKDNEIESALTEHAVNLLHAVDAAGAVLSFENGIRKLGNTPNDEQLTALANWLKSNVNESLFFTDRFPDQYAPAEAFKQLASGVMVLTLSREMGEYVIWFKPEQLETITWAGNPDKPVEPDANGMMQLSPRKSFEAWSQTVSGASKPWSSEEVKSAIRLKSEITYAINQKAGAIRLLNEKLKLAYEELDTFSYTISHDLKNPITAIKSYAQILMRDPDMKPTAAKILGRINGGADKMNKMIQEVLEYSRIGRSELALKEVDLKALITDHVNDLRVALGAEHAEIIIGDTPKIYGDPGMLSQVFSNILSNAIKYSMKSEPPRVTINGTETETEVVYTVKDNGLGIDIKNLPRIFELFKRMDNVTDIEGSGVGLAIVKRIIEKHNGKIWVDSELGSGSTFNLSFNK
>NZ_CP014773.1|WP_067188148.1|960442_961213_-|TerC-family-protein
MEIFTEPETWISLVTLTVLEIVLGIDNVIFISILADKLPVDQQSKGRRVGLGMAMITRILLLLSISWVMTLTSPIFNISGLVGATDPDWIEKLAISGRDLILIVGGLFLIYKSTAEIHQKIEGEEEDEGKVKAHPFWGTIFQIMLLDIVFSLDSVITAVGMAQHVEIMIAAVVIAVGIMMWASDTVAGFVNKHPTVKMLALSFLLLIGVSLLAEAFEQHIPKGYIYFAMAFSILVEMLNLKMRAKRSANSAKGIKR
>NZ_CP014773.1|WP_067188152.1|961296_962598_-|hypothetical-protein
MAPKIFNRALALLAGIVLSTTVFAQVTPPLPPTPPVQDEDIHVDFDTKAFEKSMAHVQLKMKDLQVRMKKLTIKQKADIKLVMKDFSKTFSSDFGKNFAGAFDGLVPDVSESFNGSVKNNTDNEEYRKKIASGEITEKIKNYSKSYSVDGNDLLELDNRFGKITVNTWAKNEFKVDVQMKFSSENADYVNNMIQGASVSDSKVGSTVSFKTNLPSSNNNGNRHQSMEINYTVYMPAGNPVDIENKFGSVVLPDLSGKATIRVSYGGLTAGALTNSENDVTVKFGDANIGNFNSGKVEVAYGKLKTGTVNNIEADIKFSSINIDRLKGSADVTVKYGDGFRIGTVEKTVKSIYVNAQFTKINFDFRQLGNYTFDVTTRFGGFDYDDNNMKVTSKTPSDEDRGWSSTKNYKGYIGNSGSANKISITASYTGVSFY

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Crispr_ID: NZ_CP014773_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_3

1268249-1268379

Orphan

Consensus_repeat	Method
ACGAAGCATCTGTTAACCGATAGGCAAACTAAGCATGGCGTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014773_3

>merge|NZ_CP014773|3|1268249-1268379|CRISPRCasFinder
ACGAAGCATCTGTTAACCGATAGGCAAACTAAGCATGGCGTTTAACGGATTCTTCCTTGCTGAAGCAACCTTGTCATGCTGAGGCACGAAGCATCTGTTAACCGATAGGCAAACGTAAGCATGGCGTTTAA

>NZ_CP014773|3|2|1268249-1268379|CRISPRCasFinder
ACGAAGCATCTGTTAACCGATAGGCAAACTAAGCATGGCGTTTAAC	GGATTCTTCCTTGCTGAAGCAACCTTGTCATGCTGAGGC
ACGAAGCATCTGTTAACCGATAGGCAAACGTAAGCATGGCGTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067188642.1\|1256226_1257015_-\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|181038
NZ_CP014773.1\|WP_067188684.1\|1280185_1281199_+\|dipeptide-epimerase	unknown	unknown	gnl\|CDD\|239435
NZ_CP014773.1\|WP_082800446.1\|1278405_1279011_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
NZ_CP014773.1\|WP_067188663.1\|1270961_1271810_-\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP014773.1\|WP_082800227.1\|1255619_1256126_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP014773.1\|WP_067188644.1\|1257095_1259030_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236054
NZ_CP014773.1\|WP_067188653.1\|1262980_1263214_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067188666.1\|1271924_1272662_+\|acylhydrolase	unknown	unknown	gnl\|CDD\|239945
NZ_CP014773.1\|WP_067188655.1\|1264189_1266652_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP014773.1\|WP_067188677.1\|1276663_1278406_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349460
NZ_CP014773.1\|WP_067188661.1\|1268622_1270923_+\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP014773.1\|WP_067188651.1\|1262682_1262901_+\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_CP014773.1\|WP_157532047.1\|1275564_1276284_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067188646.1\|1259156_1259942_-\|succinate-dehydrogenase-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|239578
NZ_CP014773.1\|WP_067188674.1\|1276285_1276651_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP014773.1\|WP_067196918.1\|1263408_1264065_-\|metal-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224240
NZ_CP014773.1\|WP_067188670.1\|1274221_1275487_-\|peptidase-T	unknown	unknown	gnl\|CDD\|235484
NZ_CP014773.1\|WP_067188657.1\|1266987_1267593_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371327
NZ_CP014773.1\|WP_067188668.1\|1272888_1274073_+\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
NZ_CP014773.1\|WP_067188648.1\|1260123_1262493_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067188642.1\|1256226_1257015_-\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl\|CDD\|181038	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.	0
NZ_CP014773.1\|WP_067188684.1\|1280185_1281199_+\|dipeptide-epimerase	gnl\|CDD\|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	3.8638e-110
NZ_CP014773.1\|WP_082800446.1\|1278405_1279011_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	2.96301e-19
NZ_CP014773.1\|WP_067188661.1\|1268622_1270923_+\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP014773.1\|WP_067188648.1\|1260123_1262493_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	6.29464e-67
NZ_CP014773.1\|WP_067188644.1\|1257095_1259030_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236054	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0
NZ_CP014773.1\|WP_067188651.1\|1262682_1262901_+\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	4.66681e-32
NZ_CP014773.1\|WP_067188666.1\|1271924_1272662_+\|acylhydrolase	gnl\|CDD\|239945	cd04501, SGNH_hydrolase_like_4, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.01903e-62
NZ_CP014773.1\|WP_067188655.1\|1264189_1266652_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	6.31206e-39
NZ_CP014773.1\|WP_067188670.1\|1274221_1275487_-\|peptidase-T	gnl\|CDD\|235484	PRK05469, PRK05469, tripeptide aminopeptidase PepT.	0
NZ_CP014773.1\|WP_067188663.1\|1270961_1271810_-\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	7.30006e-32
NZ_CP014773.1\|WP_067196918.1\|1263408_1264065_-\|metal-dependent-transcriptional-regulator	gnl\|CDD\|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	6.60433e-44
NZ_CP014773.1\|WP_067188646.1\|1259156_1259942_-\|succinate-dehydrogenase-cytochrome-b-subunit	gnl\|CDD\|239578	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. C. glutamicum SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The transmembrane subunit of members of this subfamily is also called Sdh cytochrome b558 subunit based on the Bacillus subtilis protein. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes. Proteins in this subfamily from G. metallireducens and G. sulfurreducens are bifunctional enzymes with SQR and QFR activities.	8.83349e-61
NZ_CP014773.1\|WP_067188674.1\|1276285_1276651_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	3.70029e-39
NZ_CP014773.1\|WP_082800227.1\|1255619_1256126_+\|thioredoxin-family-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.16208e-06
NZ_CP014773.1\|WP_067188657.1\|1266987_1267593_+\|hypothetical-protein	gnl\|CDD\|371327	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).	8.32972e-07
NZ_CP014773.1\|WP_067188668.1\|1272888_1274073_+\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	3.18583e-178
NZ_CP014773.1\|WP_067188677.1\|1276663_1278406_+\|hypothetical-protein	gnl\|CDD\|349460	cd06241, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	2.09389e-69

>NZ_CP014773.1|WP_067188657.1|1266987_1267593_+|hypothetical-protein
MKTQIFTIATIFTLALGTVSSTFAGTNDKAKEEVTTLNNVSQISRIEIRGNVQLFVSDGSADQVKVYNKFYAENAVVKSDNGTLSIASYDARTLVVWVTAADLRTINAYDNAEVKSFGNLSKIDLDVNLYNNASAKLNLDAYKASITVNDRAKADVSGTVTEYSVTRDQSASVNASTLAATNKTEKVTNKFTPAKNEVATL
>NZ_CP014773.1|WP_067188655.1|1264189_1266652_+|TonB-dependent-receptor
MRNLLLAILLFFIAGNSFAQTGSLSGKITAGNSPLAYGTITLAGTRHGTTANEQGFYEIKNLAPGEYLALFSRLGYYSERIKVTIVAGQAATRSADLKEGSSALSEVVVTGVSRATQLRSNPVPIVVLTKKEIDQNVNNNIIDAIIKGVPGVTAVTTGPNISKPFIRGLGYNRVLTLYDGIRQEGQQWGDEHGIEIDQYGISRAEVIKGPASLTYGSDALAGVINLIPYIPNGEDGKLKGDWVTDYHTNNGLIASSLGLSYKKNDWKYAFRASGKMARDYQNTIDGPVYNSGFREYIVSGMLRTDKKWGYSQLAATVYNNQQEIPDGSRDSLTRKFTMQVAESAADDIKDRPVVSAARLSSYAISPLYQHIQHYRIYNKNEFKLGDGILDLSIGGQQSIRREYNHPTLPQQAGLYVTLNTFNYDLRYSPPLFAGIETSFGINGIYQTNRSKAATDFPIPDYNLFDAGGFFFAKKTLGKVDISGGIRYDTRNIRWEDFYVGPNAANGFEQKAIPGSPGAKLQFPNFDYHYHGVSGSLGLTYNLSERLLLKANIARGYRAPNITEIGSNGLDPGAHIVYLGNRSFVPEFNLQEDLGFIAYLKDADIMVELFNNQVQNFIYQSRLDDANGNPVIIVAGNSTYQYQQSKARLYGAEFSLNLHPHGIKWLSLNNSLAWVTGINQNEALIKQSGGAAKYLPFIPPLHLRSQLMLKLQGTYGIFSKIYLRAEADAYATQNNFYALNNTETATPGYTLINTGIGATLTRKGGKPFCELFLQADNLFDVAYQSNLNRLKYFEYYNSSPNGRLGIYNIGRNLSFKVIVPF
>NZ_CP014773.1|WP_067196918.1|1263408_1264065_-|metal-dependent-transcriptional-regulator
MHTLSEENYLKCIYRLWQDRGEKITPTAIAESLGNNPASVVDMIRKLTDKQLIAYDKKKGVELTTQGQKDAVLIVRRHRLWEVFLLEKLGYHWDEIHDIAEELEHIKDTSLADRLDKFLGFPEYDPHGDPIPKANGKMAKRSSTTLADLKPGTHCRISAVKDTSSAFLQYLQKLDINIGTMVQLVEKIQYDSSLVISIADGANTTVSQKFGENILVDL
>NZ_CP014773.1|WP_067188653.1|1262980_1263214_+|hypothetical-protein
MATPENRKLIFPLMIFIGMVAVGVNTINKAINSHQTWRLIIAVIPTLMFSAATILVIMQYKYHHKESEEETTDHRLD
>NZ_CP014773.1|WP_067188651.1|1262682_1262901_+|alkylphosphonate-utilization-protein
MEELIVKDSNGNQLKDGDSVTLIKSLKVKGGGTTLKQGTLVKKIRLTDNEEEVDCKIDGMSIVLRTEFLKKR
>NZ_CP014773.1|WP_067188648.1|1260123_1262493_-|S9-family-peptidase
MKKRFAPILLFLFTGASAQKLETLTIEKIMRDPKWMGVSPSNVRWSDDSKKLYFDWNPKNTERDDRYFITPTNTKPREVAKDELRELVSENGSFNKKFTLKTFERNDDIFLEDLKTGAVRQLTSTTDQEANPVFTGDEKAIIFTKGSNLYQLSLAKGELVQLTNFVKTASAPKKNTDNQQEKFLKQQQLELFDIIKVNEKDRKLDSAESKLTQPDKLKELVFGDKRVTAVKASPDGRYITYRLVQPAEGDKRAIVPNYVTASGFTEDIPNRTKVGAAQSTSVSYVFDTLRDSVYVINTKDLPGIKDLPDYLKDYPKVLEARKKANADRLVDVGAPVWSEDGKYAVVVVESLDNKDRWIMKLNAAKGTLSLLDRQRDEAWIGGPGTGGFFSSGSLGFIDNTNFYYQSEASGYSHLYVVNVATGVKKQLTSGRWEVQTLHLSVNKKDFYFTANIDHPGITHFYRIPVTGGTPLKLTSMKGGNEISLSPDEKWIAIRYSYSNKPWELFIQPNRAGATAVQVTRSATAEFNSYPWKQPEVISFKNRYGSDIYARVYQPKTPDPGKPAVVFVHGAGYLQNAHYWWSSYFREYMFNNMLVDNGYTVMDIDYTASSGYGRDTRTGIYRHMGGKDLTDQSDGVKYLVEKYGVNPKHVGLYGGSYGGFITLMALFTQPDVFASGGAIRSVTDWAHYNHNYTSNILNQPFEDEIAYRQSSPIYFADGLKGKLLMLHGMVDQNVNYQDIIRLTQKLIELHKENWELASYPVEDHGFVQPSSWTDEYKRIYKLFEETLKGK
>NZ_CP014773.1|WP_067188646.1|1259156_1259942_-|succinate-dehydrogenase-cytochrome-b-subunit
MSEFKQTFNSSLGKKLIMALTGLFLCTFLIVHLGGNLLLFSNDDGYSFNAYANFLTHFPPIEVIAYILYLCIIIHAVYALVLTVKNRRARPVGYAVQTKSPASWSSKNMGLLGSILLVFIVIHMGDFWLTYKYKHILGFKQYTTNQVTGERKVEAFTPPNQEFERSFTTDGDVEIMRVKDIHARVQESFSNPIYVVFYVIAMGALSFHLLHGFQSAFQTMGWRHRKYTPVVHFIGTWFFGVIIPLGFALMPVVYFIQSLSK
>NZ_CP014773.1|WP_067188644.1|1257095_1259030_-|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MSLDAKIPQGPLAEKWSKHKFNLKLVNPANKRKYDVIIVGTGLAGASAAASLAELGYNVKAFCFQDSPRRAHSIAAQGGINGAKNYQNDGDSIYRLFYDTIKGGDYRAREANVYRLAENSVNIIDQCVAQGVPFAREYGGLLDNRSFGGSQVSRTFYARGQTGQQLLLGAYSALNRQIHLGKVKMYTRTEMLDVVVVDGQAKGIITRNLKTGEIESHGGHAVLLATGGYGNVFYLSTNAIGSNVTAAWRAHKRGAFFANPCYTQIHPTCIPVTGDHQSKLTLMSESLRNDGRVWAPKTAEVAEKLRKKEITAAQVKEDERDYFLERKYPSFGNLVPRDVASRNAKEMTDEGKGVGTTGLAVYLDFAEAIQRLGEDTVRAKYGNLFDMYYQITDENPYKQPMRIYPAVHYTMGGLWVDYNLSTNVPGLYAMGECNFSDHGANRLGASALMQGLSDGYFVIPYTIGDYLATIGPKAIDTSHPAFEKTKQEVIAYNNKLLALKGNKTVVEYHRELGHIIWEYCGMARTEEGLIKAKGLIKALKADFWVNAIVTGENDEVNAALERAGRVADFIELGELMIDDALMRRESCGGHFRLESQTPEGEALRDDDNYAFVAAWEFKGENQEEELHKEELIFENVKLSQRSYK
>NZ_CP014773.1|WP_067188642.1|1256226_1257015_-|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MSGNMNLTLKVWRQKNSQTAGKFVTYKAEGISPDMSFLEMLDVVNESLTKNNGEPIHFDHDCREGICGSCSLYINGRPHGPKKAITTCQLHMRTFSDGETITIEPWRAAAFPVVKDLGTDRSAFDRIQQAGGFISVNTGAAQDANAILIPKVIADEAFNSATCIGCGACVAACKNASAMLFTSAKITQLGLLPQGQPERYSRVQAMVAQMDEEGFGNCTNTGACEAECPKEITLMNIGRMNNDYYSAKLFREEHAHDHTGGE
>NZ_CP014773.1|WP_082800227.1|1255619_1256126_+|thioredoxin-family-protein
MLLYQMKKILFALSLFIAVGCSAQPPAIAPYKILKIDNSYTTNADLKKNKPTMLIYFAPDCSHCQKLVYDMKPKMNSFKDLQIVMVTFSDIKMVKPFYDEYKLASFPNITIGSEGYGGSVQKFYQIRTTPFIAFYNTKGNLVKSYEKVPVMAELQESAAKAVKGENAK
>NZ_CP014773.1|WP_067188661.1|1268622_1270923_+|RNA-binding-transcriptional-accessory-protein
MINHDIKIAQELAVSSKQVTATIALLDEGATVPFISRYRKEVTGSLDEVQVAAIRDRVQQLRELDKRREAILKSLTDMAKLTPELTAQINAAETMVQLEDIYLPYRPKRKTRATAAREKGLQPLADVLLEQKNLDPELEAGKYIDAEKGVASMEEALAGARDIIAEHISEHAETRAKMRQLFTEKGTFQSKVADGKEVEGIKYKDYFDWTEPVKSAPSHRILAMRRGEKEEILWLDIKPTEEDALHLLESEFIKGRGAASSQVQLAIGDGYKRLLKPSMETEIRLLTKKKADEEAIRVFAENARQLLLGAPLGQKRIMAIDPGFRTGCKLVVLDEQGQLLENTAIYPHTGAGQAKEAEKTVQHLFERYKIEAIAIGNGTAGRETEVFVKNLNLPGAVIVMVNESGASIYSASDVAREEFPDKDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQTSLDDTVVSAVNAVGVELNTASKQILAYVSGLGPQLAQNIVEYRNANGAFKRRDQLKKVARLGDKAYEQAAGFLRIRGAENPLDTSAVHPERYALVEQMAKDINCKVLDLMRDEKLRKSIPLQKYISDTVGLPTLNDIMAELAKPGRDPREQFEAFSFTEGVNAIGDLKVGMKLPGIVTNITNFGAFVDIGVHQDGLVHLSQITNRYIKDPNEVLKVHQKVEVTVTEVDANRKRISLSMKENEKREAPVAKKTAGSFSSNPAGTKTKPAQKPIAQRPAKSQAEPEMDMMSKLAALKNKFK
>NZ_CP014773.1|WP_067188663.1|1270961_1271810_-|DUF1080-domain-containing-protein
MKTAKLLLLLVLCAGILAFTQKEATDKWEKLFNGKDLTGWDTYIGPDLDDKGKPVNNVPIGLNNDPKGVFTIVKEDGERAIRISGENWGGISTKKEYQNYHLQLEFKWGKLSWGQKKGQKMDSGVLYHATGKHGADYGAWMRSQEFQVEEGNCGDYWGVAGATAEIPVIVRYGKEYVYNVGGILTTFAEGGKAGRHCTKCGNAETPTGEWNTLDLYCSGDTSIHVINDKVMMVLYHLKQPENGKMLPLTKGKIQIQSEGAEIFYRQIKIQPISQLPPELVKQ
>NZ_CP014773.1|WP_067188666.1|1271924_1272662_+|acylhydrolase
MKFTLLIPALLLTASSFAQQSKTDMVKPAPSVAAKEDFADDWADLRHYAAENSVLPTPARDEHRVVFLGSSIFERWKVLVPEYFNNKNYIDRGVSGQISPQLLLRFRQDVIGLKPKAVIILAGSNDIAGTTGHVTNERIMDNIRSMTELAQVNHIKVILCAYLPVFDYPWRRGLEPAGKIIALNKLIKTYATANNLTLLDYFTPLVDSQTNGQKAELTLDGVHPNVAGYKIMATVTDAAIKKALR
>NZ_CP014773.1|WP_067188668.1|1272888_1274073_+|GTPase-HflX
MKQKFYDTAVKQEKVVLVGVITPNETEAREKEYLEELEFLVATAGGLTVHTFTQKLQRPERATFVGTGKLEEIKEYVTAEEIDIVVFDDELTPSQLRNIERELQVKVLDRSNLILDIFAGRAQTAQAKTQVELAQLQYLLPRLTRLWTHLERQKGGIGMRGPGESQIETDRRLILNKISLLKERLKLIDRQNETQRKNRQQLIRVALVGYTNVGKSTIMNMLAKSDVFAENKLFATLDTTVRKVVIENVPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADILIHVVDVSHPTFEDQIRTVNETLKELKVVDKKTITVFNKIDAFNPADHNIDIKETPLTMDDFNHSWMAKNNAPAIFISATEKENVEEFKTMLYDAVKTIHTERYPYDNLLY
>NZ_CP014773.1|WP_067188670.1|1274221_1275487_-|peptidase-T
MDFHTGLSFTATERFLRYVTIDTQSDPNSLTCPSTEKQKDLGRLLVKELLQMGVTDAHLDEHGYVYATIPANSDKMQVPVICFCSHMDTAPDCSGKDVKPLVHLNYDGADIVLPDDSSQILRMADHPDLQNQLGNAIITASGSTLLGADNKAGVAEIMDACYQLMTHTELKHGTVKILFTPDEEIGRGVDMADIEKIGAFACYTIDGESAGNMENETFSADGARLTINGVSSHPGFAKGKMESAIKIAGQIIAALPAGLSPEATEGMQGFVHPVDMAGHVETATIDFIIRDFEEELLLSHANVIRKTAEEVLDAYPNSTYTLEVKQQYRNMKNVLAQHPQIVDYGMQAIRRAGLEARLCSIRGGTDGSRLSFMGLPTPNIFAGEHAFHGKQEWVSVEDMQKAVETILHLCMIWEENSPSAL
>NZ_CP014773.1|WP_157532047.1|1275564_1276284_+|hypothetical-protein
MKKYILLVAVTITSLAAKAQGGYNYNSFGFGIGVSYLKPLADLKKNYSDLGYHADFTFYYNPYIPVALEFQTGTLRGGGDNISDDLYTRKFNNKYKALLLHVDYQLGDALDYERNGFFNILKNFYGGIGAGIVFNNVTTNRYSLVVPNYKFPGVDKSMSFAVPLRVGYEFKVFDYYGVPKFGITLGYEHTFTIGEGLDGYNDPTGQFKNNAADQYRQVTIGLKYNFGYENSYDKSIKGN
>NZ_CP014773.1|WP_067188674.1|1276285_1276651_+|MmcQ/YjbR-family-DNA-binding-protein
MNIEELRDYCLEKKAVTETFPFGEDTLVFKVGGKIFLLAGLEDGHHFNAKCDPELASELREHHTEVKPGYHMNKAHWNTVYMSGTLTRKQLCEMIDHSYGLVLKSLPKKLQAEISSANKTG
>NZ_CP014773.1|WP_067188677.1|1276663_1278406_+|hypothetical-protein
MKRTIALLFSCFYAIASYAQLTPFELSKNKNYSATHAEVIAYYSKLAKLYPQMRMIDYGMTDVGKPLTLIVLSKDKVFDPAAVKKQNKRVLLINNGIHPGEPEGIDASMMLSRDLLKNNTLPKDVVICMIAVYNIDGNMNRGQSRANQNGPQAYGFRGNYRNLDLNRDFIKADSRNALAFAQILNTWQPEVLLDNHVSDGADYQYVMTLIETQKDKQNPLLAAYTANTMTADLYKGMKKSGFEMIPYGAGESGLPDSGIVSFMETPRFSTGFAAQHNMISYMTETHMLKPFDKRLYATYNFMQQLIGICQRDARVIGDLRKKVDAEVSKQTTFGLAWALDEKKVDTITFKGYEAAYKTSEVSGLNRLYYDRTKPYTKTVKFFNTYKTTAAADKPVAYIIPQAWGKVIDLFKLNNVAMHRLAHDTTLSLQMYYIADYKTAQRPYEGHYIHTGVKLNPVESNIKFYTGDYVVYTNQAINRYIVETLEPQGVDSFFAWNFFDSVLGQKEYFSDYVFEDIAGNLLKKDPELRKKLDDEKAKDPKLAASGAAQLNFVYRNSPYFEKTYLRYPVGRLLTDTKLDLK
>NZ_CP014773.1|WP_082800446.1|1278405_1279011_+|rhomboid-family-intramembrane-serine-protease
MEYLMVAPVASIIFVITLATSVYAFSNENIYAKFILNPYEVSRGSRVWTVITSGLIHADWNHMFFNMLSYYFFAFNLEPVLGHWQFGVLYLVSMILADLPSIQKHRDDSWYNTLGASGAISAVVFSAILFNPKGEMGLIFLPFTIPAWIFGILYLIYCHFASKHARDNINHDAHLFGALSGILITIALHHSVINDFVAQFK
>NZ_CP014773.1|WP_067188684.1|1280185_1281199_+|dipeptide-epimerase
MKLTYQPFDLQLKHTFTIAKFSRTSTPVMLVQIAHEGLTGYGEASMVPYMGESFETAATFLSRVDAGQFQYPLNFPAIISYLDSIAQGQPAIKAAIDIALHDLDGKLQGKPCWELLGTDPAKMPLTSYTIGIDTEEVIIQKLKDAAEFKIIKVKLGRDNDRELIQTIRSVTSVPLFVDANQGWTDREKSLDLIYWLKEQGVVLIEQPMLKTDIDGNAWLTEHSPIPLIGDEAVQRLPDVAKAKGVYHGINIKLMKSAGMYEAKQMIDKARELGLTVMIGCMSETSCATLAAAALAPQCDWADLDGPFLTVNNPYQLPAFEDGKWILNNAAGLGLENF

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Crispr_ID: NZ_CP014773_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_4

1794474-1794568

Orphan

Consensus_repeat	Method
ATGATTTGAGCAAATCAGCCCAATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014773_4

>merge|NZ_CP014773|4|1794474-1794568|CRISPRCasFinder
ATGATTTGAGCAAATCAGCCCAATTCGTGAAATTCGTATTCACTCAACCTTCAACATTGCTTAACCGATATGATTTGAGCAAATCAGCCCAATTC

>NZ_CP014773|4|3|1794474-1794568|CRISPRCasFinder
ATGATTTGAGCAAATCAGCCCAATTC	GTGAAATTCGTATTCACTCAACCTTCAACATTGCTTAACCGAT
ATGATTTGAGCAAATCAGCCCAATTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067189525.1\|1798663_1799533_+\|ribokinase	unknown	unknown	gnl\|CDD\|238912
NZ_CP014773.1\|WP_067189514.1\|1785282_1785765_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP014773.1\|WP_082800246.1\|1785922_1788724_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP014773.1\|WP_067189506.1\|1778819_1779914_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379862
NZ_CP014773.1\|WP_067189516.1\|1788753_1790211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067189508.1\|1779994_1783132_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226220
NZ_CP014773.1\|WP_067189504.1\|1777520_1778795_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP014773.1\|WP_067189527.1\|1799767_1799965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067189523.1\|1795404_1796238_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP014773.1\|WP_067189521.1\|1794602_1795271_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP014773.1\|WP_067189534.1\|1802792_1803260_-\|DUF4293-domain-containing-protein	unknown	unknown	gnl\|CDD\|379484
NZ_CP014773.1\|WP_157532067.1\|1802245_1802497_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067189536.1\|1803386_1804184_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP014773.1\|WP_067189519.1\|1790286_1790871_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP014773.1\|WP_067189520.1\|1790984_1794242_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379297
NZ_CP014773.1\|WP_067189510.1\|1783463_1784714_+\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340842
NZ_CP014773.1\|WP_082800247.1\|1796226_1798548_-\|family-20-glycosylhydrolase	unknown	unknown	gnl\|CDD\|119333
NZ_CP014773.1\|WP_157532066.1\|1784805_1785186_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067189531.1\|1801086_1802103_+\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP014773.1\|WP_067189529.1\|1800164_1800923_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067189525.1\|1798663_1799533_+\|ribokinase	gnl\|CDD\|238912	cd01937, ribokinase_group_D, Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	2.5442e-65
NZ_CP014773.1\|WP_067189514.1\|1785282_1785765_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	4.42644e-14
NZ_CP014773.1\|WP_082800246.1\|1785922_1788724_+\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	3.18961e-57
NZ_CP014773.1\|WP_067189506.1\|1778819_1779914_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	1.37028e-44
NZ_CP014773.1\|WP_067189508.1\|1779994_1783132_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_CP014773.1\|WP_067189504.1\|1777520_1778795_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	7.85803e-20
NZ_CP014773.1\|WP_067189519.1\|1790286_1790871_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.84007e-11
NZ_CP014773.1\|WP_067189523.1\|1795404_1796238_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	3.17501e-45
NZ_CP014773.1\|WP_067189534.1\|1802792_1803260_-\|DUF4293-domain-containing-protein	gnl\|CDD\|379484	pfam14126, DUF4293, Domain of unknown function (DUF4293). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 136 and 154 amino acids in length.	7.40632e-33
NZ_CP014773.1\|WP_067189536.1\|1803386_1804184_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.62136e-107
NZ_CP014773.1\|WP_067189521.1\|1794602_1795271_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	8.32221e-20
NZ_CP014773.1\|WP_067189520.1\|1790984_1794242_+\|TonB-dependent-receptor	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	7.76929e-18
NZ_CP014773.1\|WP_067189510.1\|1783463_1784714_+\|glycosyltransferase-family-1-protein	gnl\|CDD\|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	2.34068e-88
NZ_CP014773.1\|WP_082800247.1\|1796226_1798548_-\|family-20-glycosylhydrolase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	0
NZ_CP014773.1\|WP_067189531.1\|1801086_1802103_+\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP014773.1\|WP_067189529.1\|1800164_1800923_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	1.00433e-94

>NZ_CP014773.1|WP_067189520.1|1790984_1794242_+|TonB-dependent-receptor
MKKLYFFIFTLLFAAGANAQITTAVISGKVVDQKGVTMPGVTVSAVNTSTGTRYGAQTNSDGRYTIANINPGGPYTISASFVGYKKDERTDITLSLGGAAFNFLLADETTSLKEVRVVATGGATKTGASTRISQSQIRNLPTISRSLQDLTRTTPQSNNNSFQGTNYRYNNVTLDGAINNDAIGFSPSLGGQSNASGQVGSSTRTSPVSLDAIQDIQVLVAPYDIKIGNVLGGSINAVTRSGTNDFTGSIYGYGRGAFLVGPNNAKAASGGDGSSLPTSFHDYQTGIRLGFPLIKNKLFFFTNEEIARRQDPVIAGAGTAGSANVLSLTDAQNIANTMASYGINAGSYGNTSIFSRSNKYFNRLDWNINDKNQLTLRNNTISSTATNLERDQQNFRFSGIDYTSHNNSTSTVAELKSRFSNNLSNSLVLGYSNVHDFRDPNSDPALPQIEITGRTPGTTIFLGTDREAAIFDMRQKTTEFTDNLTYTKGKHTFTFGTHNEFYNITYNFVNAWNGRVAYANIEDFLANKPSRVRANYNYTNNTRDYIMANPSAKFNVNLLSVYGQDEIQITDNFKLTAGIRFDYADVPTKQPLSIKTTGAPVDANYGNTFTYTKPADIKNNYLGNVQVNPRVSFNYDINGDQTAVLRGGSGFFTGRVPFAWFGYAFYNNGNTYGAFDKRSSKYVFTPGTNPVQAPANGGLNFVNQQTLNPVNTGASGPTQVDLIDNNFKMPQVWRTNLAYDYTTADKWKFTVEGIYTKVIRDLKFQQVNTVDQVTYYPYDVNKQQPIFVNAPVNASYTNAYLLSNTNQGYRYSATAQIAKIFPFGLTANVAYTYGHSKDVTNGIRNSMESNWQLNQALNPNNPGLANSNFDIRHRIVSTVNYNVAWGTNKSLVSNFAFFFAAQSGNPYTYGFLPSAIDGTGQQVSLAYIPKNGETVNFFSDVVGGATAAQQAAAFDNYINGNKYLSSRRGTFTQRNAAFTPWNNNLDFRFSQDFKFGSGKRKQVITFTYDIVNLTNLLNKSWGQYYFSANTFNSTSSIGLTPKTTPAFGSASTTYPKYTFADPGVPYSVDLFASRWQMQFGLRYAF
>NZ_CP014773.1|WP_067189519.1|1790286_1790871_+|helix-turn-helix-transcriptional-regulator
MSFLHVNFSEVDTQIAQFARAIALPIRVFIIRMIAENGNSINKQNFYNSTFDARAINKHIMELKSLGIIKVKTIKAQVTYHIDQPMFDQMSAQFGMLFYPVSNSKPIEEPKPELPVDDAVTATSFGQYIKLHRIELNMSQESLAARIQIDRALLSRIECGRKPFAADKLAQLAKALYLSMEEVKLAFEYDGGLC
>NZ_CP014773.1|WP_067189516.1|1788753_1790211_+|hypothetical-protein
MKKSLLVFALGASIMFASCSKKDVIIDPVVPVIPPVVTPVTAVEVSGDISANTTWTADKIYTLKGFVYVTNGATLTIEAGTIVKGDKASKGTLIITRGAKISAIGTVDKPIVFTSSFAAGTRASGDWGGIILLGKAPVNQGDNVGIEGGLDAKGDAAKYIQYGGTDAADNSGTLKYVRIEYAGIPFSPDNEINGLTMGGVGTGTTLDYIEVYRSGDDSYEWFGGTVNAKHLLSIAALDDDFDTDFGYAGKVQFGIAQRYPSIADNSGSNAFESDNDGSGSDKLAKTSAVFSNMTLLGPASTASTPANISANFQHGAQIRRNSSESILNSVFAGFMEGIYIDDSKVTTAGSTSTNFTTGSLVFQNNLIYGSNRKSNEVKGDNVTQKAIFETKLRAENTFLATSFADALITTPFKFSSDFANAGTPNFADLAGSPSASGALFTNAKVTDAFFDKVTYRGAIGTTDWTTGWTNFDPQVMPYTTPGAVK
>NZ_CP014773.1|WP_082800246.1|1785922_1788724_+|TonB-dependent-receptor
MKAVKKAIHTALVILITYSFCLPAFGQSTGKIIGKVIDQKTSETLIGATVNIEGTTQGIATDVDGHYALSGVKPGKYTILVRYIGYQTKSISDIEVKAGATTPLDVTLAASTTTALKEVVVRATYRQASVASLYAIQKNSVSISDGISSELIRRSPDRNTSDVLKRVSGTTIQDNKFVVVRGLSDRYNSASLDGAPLPSTEPNRKAFSFDIVPSNLIDNIIINKTASPDLPGDFAGGNVQILTKDIPDQNFVSLALGYGYNTQSTFKDFRSGFRSTSDYFGFDDGSRKLVKNFPSTNEILTNQVTGTRNIQSINSLNNDFNIYTSKALPSQNYQITVGNVQEIGKNKNRFGTTLSLTYRNTQTITPDLQQQYDNYDYHSSVSKFSTNIGALANFAYSFGKSKITLKNLYNRILDDQFTYRTGANTGTTSSDNRYYAFDMLEKGLFKSTLEGEHALGAKTSKIKWNLGYTNIINDQPDQKKVNYKQNNPGDPYTATVASSLGKENARLFSKLNENIYSGKIDYSLPVDLFKQSTLKIGVNSQYRDRVFDARFLGVVFNEQTSDQLGYNTASLLQRPIQTLFGPNLVGTGVYDLDEIANLTDRYTANSLTNAAYAMLDSKLGDKVRVVYGLRVEKFDLNLETKDPTADKVKLNNTDFLPSVNFTYALTAKANLRASYYRSVARPEFRELALFSYYDYELLASIQGNPALKRASIDNADIRYEFYPSAGQIFSVSAFYKKFQNAIESSLDDRNSTATISYFNSKSAYVYGVELEARKALEFINGGTFFKNTTAYVNTSITKSRVENPTTGDAFLEVNRPLTGQSPYVINAGITHSELDNKLSVNVLFNRLGKRIFYVGGTRFPSVYELPRSVLDLQVGYKVLKNKGEFKLSGSDLLNARYNFQYQKDGKPFSPSGGSTFRRYTPGTNYALSFNYTF
>NZ_CP014773.1|WP_067189514.1|1785282_1785765_+|winged-helix-turn-helix-transcriptional-regulator
MNFGEDLSLQLMLANKSYHQYLFNVLKEIDVYQHYQIILLISRCGGRTTQKNIGDTLQIEKSNMVAIITLLDEKGYVTKEVNFKDRRSKLISLTAKARELITTIGQSFAAFENELADDLTWQEMHNCLRVLNKVTDKLKHISLAANGLKTLNESGAFVNS
>NZ_CP014773.1|WP_157532066.1|1784805_1785186_+|hypothetical-protein
MLKNLIKSVFFFTILMIIAMPTFMAFYGPALHQHHAHIATKQKAGHTYLETGGHHDTSWELIKKRHLSAPPTLIKVRMLAAVCLLFSIFAFAVSSAVSNLSFVNYLSRKKPFPIAERYLVYQTFLI
>NZ_CP014773.1|WP_067189510.1|1783463_1784714_+|glycosyltransferase-family-1-protein
MTGTLPESVRCEVSRKIRVVFFAEILTPDQDGAIRTMYQLINRVDRNRFEFLFIYGAGPEVIAGFQSLKVPAVSLFINAGYSLALPALAQKTITETLHRFLPDVVHIATPSLLGNVGLHYALQLQLPVITIYHTHFISYIDYYFKYLPFLIDGARQLVAQSHKAFYNQCGKIYVPSNAIAAELVAMGIEATRMQIWKRGIDTFLFSPAKKDKPAMQAITGNSYATILFASRLVWEKNLETLFLIYDELQKSDLKTNLVIAGDGSALKACKARMPRAVFTGTISHQQLAVLYASADVFLFPSVSEAYGNVVLEAMASGLPCVIADGGGSADFITQGINGFKCRPYDAKDYVAKIHCVLQNTALSNQFAEEGLSYSSAFSWDELAETYFTDLELLALQPGHKLALVQNAHKAILAMFI
>NZ_CP014773.1|WP_067189508.1|1779994_1783132_+|efflux-RND-transporter-permease-subunit
MDKLIKNIIYFSLRHRAMVFFLTGVLAVLGVWSYLNTPIETFPDVTNTQIIIIAQWPGRSAEEVEKMVTIPMETVLNSVQKKANLRTTSSFGLSYIRIIFDDDVDDAFARQQVLSRLGNADLPDGIKPEVEPPYGPTGEIYRYTLKSKTKTLHELTAIQDWVLDRQFKAIPGVADVNSFGGEEKTYEVSVNPSLLQKYGLTSLDVYNAINRSNINVGGDIIEKNDQAYIVRGIGLINNISEIENIIIKNVNNVPILARNIADIKESGLPRLGQVGRDKDNDVIEGIVVMRKGENPADVLTRIKAKVTDLNDNVLPKDVKLDTFYDRTNLMEFCTETVIHNLLEGIVLVTVVVFLFMADWRTTLTVAIIIPLALLFAFICMRIKGMTANLLSMGAVDFGIIIDGAVVMVEGIFVALDHRAKEVGMQKFNGLAKLGLFKNVGAEMGKAIFFSKLIIITCLIPIFAFQKVEGKMFSPLAYTLGFALLGALLFTLTLVPALSSILLRKNVREKHNPVVLFFENGIRRMFGYTYKNQKLSLSVAIIFMALTFFSARFLGTEFLPQLNEGALWVTAQLPMSTSLESSVNVTNKMRQVLSTFPEVKQTLSQVGRTNDGTDPKGFFNVQIQVDLLPKKEWKRNITQEELIAQIDKKMSQFPGIIFNYSQPIIDNVAEAVAGVPASMAVKIFGPDFTVLDHKADSVMAVLKKIRGVEDLGILRNLGQPEFRIELDQRKMALYGVATSDANSVIEMAIGGKAATQLYEGERKFDIRIRYQKQYRDTEEKIRNLMVPTLNGSKISIQEIANITTSTGPAFIYRDNNMRYIAVKFSVRGRDLGGTIAEAQQKVGDAVKLGQGYSFTWNGEFENQIRASNTLTHVVPICLLVIFLILYTTFGNAKDAVLVLMNVPFALIGGILALHITRINFSISAGIGFIALFGVCIQNGVILISVFRKNLQDGLQLDEAILTGVISRVRPVVMTALMAAIGLMPAAISTGIGSETQKPLAIVVIGGLVTSTILTLLILPVIYAIVYRFIHKRENRKLLKKIGAINA
>NZ_CP014773.1|WP_067189506.1|1778819_1779914_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MNNKILYIAVAGLLGVASCTQEKTGTMETKQVCISDSLAKMVTIDTAKNTPMKDELALSGEVSFDENKVVKVFPFTSGQVVEVKVTLGDKVTKGQTLAVIRSADVAGNYTDLSSTKADLSISKRQLEQAEYLYKNGISSERDYTEAKENYNKAIAANSKVRDQISINGGGNTSSNGTLVIKAPGSGFIVEKNITAGNFIRPDNSSSLFTISDMKDVWIWANVFESDISKIKKGYNARITTLAYPDKVFNGKVDEISSVLDPDNKVMKVRISLSNADMLLKPEMFTNVLITNKENGTAVAIPASAVVFDNSKNFVVIYNSKCDLQVREVGVIKTVDGITYVSGLKPGEKVVSKSQLLLYQALTED
>NZ_CP014773.1|WP_067189504.1|1777520_1778795_+|TolC-family-protein
MIKKYHIALITLALVLGALSGAFAQTDTLKVTFKDAEKTFLANNLELLAQKYNVDASAALIQQAKLWDNPVLNTDQNIKADNTPRFFDHRGSNGQILVQLSQLIKTAGKRGKNIQIAQDGAQIQQAQFNDLLRNLHYNLLLDFAQVANLIDQRKVYQTEIASATQMVAAIDKSYKAGNHSLKDVIRLKALLFGLQNDLVGIDSQLNELQSELKTFLVANPAQFIAPQITFNNSDTTLNAALLAEQAKAYRGDYLANRYTLNQNNHNLALQKAMAVPDITIGSTFDQNSSYAGNYVGLEISLPIPLFNRNQGNIKSARLTAQSQEYTVKNSEVQLINDVYSAVNQYNISKQLLGTGETDFYNKYDQLYNSMQKGFQMKQISLQEFIDFFDSYRETKLKILQQQVNMQKAIADVNYSVGTTIINPL
>NZ_CP014773.1|WP_067189521.1|1794602_1795271_-|flavodoxin-family-protein
MKAFILNCTLQPSPKFSNTEALINKAVTQLQEQGAETEVLRFVDYKVKPGTETDLGDGDQWPILLQKIRECDIFILASPIWMGRLASTAQSVIERLDAIFHEDGFTDEETGQYFTYGKVAGCLITGNEDGAHSCAAQILWAMQEFGFTIPPNVNAYWVGLAGRGKDYVEAGGEKHYYTNQTVRYLVANLVFFAQLLINNPITTNLKKLDELAKAESDDAGEE
>NZ_CP014773.1|WP_067189523.1|1795404_1796238_+|alpha/beta-hydrolase
MKKLSLLYWGLLCCLVSKAQVSTIAKGEHYPLTIGVVDHVQSAQLGEDRALNIYLPGGYDKDTATRYPVIYLLDGSKDEDFMHIAGLVQFLTMIDAMPNSIVVGIANVDRKRDFTYPSANPADLKLVPTSGGSEKFTAFIEKELQPYIQENYKVSGSKTIIGQSLGGLLATEILLRKPALFTNYIIVSPSLWWDNETLLKKAPALLRSNAYRGIKTYLTYGSEGSQMIGDAQKLAGMLKADLNLRSASNFMPNEDHLTILHNAVYSALQWINKPSIK
>NZ_CP014773.1|WP_082800247.1|1796226_1798548_-|family-20-glycosylhydrolase
MNEKIPQNKIIRITLKVLVMLIAGAGQLHAQAPATDPYIGIIPAPASVIQSAGTFTFSSATTIKADNPKDRTVLFLLDFLQSNGHFKNKISKYNHKSKTATGLVLTAAGADLLPAEGYKLTITPKKITITGKGAGLFYGMQTLMQLFPVQPSATVQLPCVTIDDAPRFGYRGMMLDVSRHFFTVPQVKKVIELLAAYKLNTFHWHLVDGQGWRIEIKKYPKLTEVGGFRQQTMYGTNRDWPDSLSYGGFYTQDQIREVVKFAADRFINVVPEIEMPAHSDAALRAYPELRCEPADPSKPSRSLNGLYCPTEETFTFLENVMTEVMDLFPSKYIHIGGDEANKQPWKESAFVQNLIKEKNLKDENGVQSYFIQRMEKFINAKGRSIIGWDEILEGGLAPNATVMSWTGEEGGIAAARQHHNVIMTPQTTGNYFDHYQSASPQEPVSFGRYAVLQETYNYDPVSSQLTPDERKYVIGTQGNLWTEYVPTVAKLQYQIFPRLFALAEVAWTKLENKNYNNFAGVRLANHFARLDAMGYNYRVPTALPVLDTMLIGQRFTYAPTTVVPGAHIYYTLNGRDPLDTDLEYITPGTIIIPAGEKREFKTRVITPSGRRSIATRVLMVNRAVLPASTYTANKPGLQYKMIKGRFTSPDQLDYVAATDSATTDKLNAEPLKKYNPYFGVTYNGYVKIPETGNYNFSQGSYTDTQLFIDGEKITESEPVLPLAEGLHQITVKYIYTAPVQTPGTRLRQTPLKIYVTDPGDAAKGEIEAGSLFY
>NZ_CP014773.1|WP_067189525.1|1798663_1799533_+|ribokinase
MFDICCIGHITIDKVVTTRSVMHMAGGTAFYFSHAMRNMDVNYGLVTALAETELQSVTDLRELGIAVTALPSQHSVYFENIYGENQDNRTQRVLQKADAFSIADLEGVEATIFHLGPLLADDMPTDLIKDLFSRGNVSVDAQGYLREVIDQGVHAIDWTDKKEALQYVDILKVNEHELEVLTGFADIEEGAKVLAEWGVKEVVITLGSMGSVIYADDIFTTIPPYKPADIVDATGCGDTYMAGYLYRRIKGDNVSDSGKFASAMAGLKIGNAGPFKGTEDDVHAMMLRK
>NZ_CP014773.1|WP_067189527.1|1799767_1799965_+|hypothetical-protein
MGQTFTSNFYAVNNKAQMKDSDVHENLDADAMIFYHSIRADLDLLKKKPKLQTIHHILDYSKSLR
>NZ_CP014773.1|WP_067189529.1|1800164_1800923_+|endonuclease-III
MLKSERYRHFLEYFQKNQPAPETELHYNSPYELLVAVILSAQCTDKRINQVTPKLFERFPDAAALAASDADEIFNYIRSVSYPNNKAKHLAGMGKMLMEVFHGEVPSGLDELQMLPGVGRKTANVIASVVFDAPAIAVDTHVFRVANRLGLVRASTPLAVEKQLVKNLPENTLAVAHHWLILHGRYICVARSPKCEICPLTWFCKYYAQQNTGAALLKAEALKLRKVKDAKKKKALNIMGKELAKRVVDKDI
>NZ_CP014773.1|WP_067189531.1|1801086_1802103_+|recombinase-RecA
MSSNTNADKMKALQLTLDKLEKSYGKGTIMKMGDAAIEATEVISTGSLGLDIALGVGGLPKGRVIEIYGPESSGKTTLAIHAIAESQKKGGIAAFIDAEHAFDRFYAKKLGVDVENLLISQPDNGEQALEIADNLIRSGAIDILVIDSVAALVPKAEIEGEMGDSKMGLHARLMSQALRKLTGTISKTGCCCIFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDVRRISQIKDTDEVSGNRVKVKIVKNKVAPPFRIAEFDIMFGEGISKAGEIIDLGVEYNIIKKAGSWFSYGDTRLGQGRDAVKQLILDNPELMEELEVKIRATVTGESLAEA
>NZ_CP014773.1|WP_157532067.1|1802245_1802497_+|hypothetical-protein
MEEIAMKADLFDKISHLEGEQLQQLYGLVLNYLNGQEDETDWDKLPEYQKERITESLKQADEGLGRPLDIVLKDLRQKYGLND
>NZ_CP014773.1|WP_067189534.1|1802792_1803260_-|DUF4293-domain-containing-protein
MLQRIQSIYLLFASIVMFGLFLFPLAHNIYVSGKLVNVTVTGVYEIVNGQENHIEVFTALTIVTVIAALVPLALIFLYKNRKQQITLCYVAILILIGYSFWMAQTVKKVVGAITLEYKNMGVGLFLTSLSIILIIFAVKAIQRDEKLVRSADRLR
>NZ_CP014773.1|WP_067189536.1|1803386_1804184_+|tRNA-pseudouridine(38-40)-synthase-TruA
MSAQQRYFIELAYDGTKYHGWQVQQNAVSVQELINKALSTLLRQEIETVGCGRTDTGVHAKEYFLHFAPQPPEGGAEDALQKFPLQGVRGLNALLPHDIAIKQIIPVHPDAHARFDATLRSYEYHIHFDKNPFLNGYSWLLRDRPDLDRMNRAAAIVMEYTDFSCFSKSNTQVKTNNCKIVNAVWEQTENGIVFKISADRFLRNMVRAIVGTLLMVGKGDMQPEDIRKIIESKSRSNAGMSVPACGLYLTEVKYPYMPPSPLKGR

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Crispr_ID: NZ_CP014773_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_5

2266944-2267121

Orphan

Consensus_repeat	Method
CCCCACACGCCGTTATGCCGAATTCATTTCGGCACCCCACAGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014773_5

>merge|NZ_CP014773|5|2266944-2267121|CRISPRCasFinder
AACCCCCAGCCGTCATGCCAAATTCATTTCGGCATCCCACGGGACAGGTAACCGTCATGACGTTCACCGAGCAAGTGGGGTGCTGAAACAAGTTCAGCATGACGACGTAAGAATTAGCAATTATCCTATTCACCCCGCACGCCGTCATGCCGAATTTATTTCGGCATCCCACGGGACA

>NZ_CP014773|5|4|2266944-2267121|CRISPRCasFinder
AACCCCCAGCCGTCATGCCAAATTCATTTCGGCATCCCACGGGACA	GGTAACCGTCATGACGTTCACCGAGCAAGTGGGGTGCTGAAACAAGTTCAGCATGACGACGTAAGAATTAGCAATTATCCTATTCA
CCCCGCACGCCGTCATGCCGAATTTATTTCGGCATCCCACGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067190286.1\|2267220_2268015_+\|aminotransferase-class-I-and-II	unknown	unknown	unknown
NZ_CP014773.1\|WP_157532307.1\|2270837_2271935_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP014773.1\|WP_067190264.1\|2257156_2258497_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271323
NZ_CP014773.1\|WP_067190282.1\|2264569_2265472_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP014773.1\|WP_067190276.1\|2262262_2263249_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
NZ_CP014773.1\|WP_067190272.1\|2261209_2261794_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP014773.1\|WP_067190292.1\|2268919_2269390_+\|lipocalin-family-protein	unknown	unknown	gnl\|CDD\|372661
NZ_CP014773.1\|WP_067190288.1\|2267992_2268376_+\|DUF3037-domain-containing-protein	unknown	unknown	gnl\|CDD\|378608
NZ_CP014773.1\|WP_067190298.1\|2272192_2273944_+\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350096
NZ_CP014773.1\|WP_067190300.1\|2274252_2274627_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190290.1\|2268372_2268900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190294.1\|2269411_2270254_+\|ThuA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377643
NZ_CP014773.1\|WP_067190266.1\|2258640_2259093_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190278.1\|2263299_2264052_+\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|376655
NZ_CP014773.1\|WP_067190304.1\|2275769_2277158_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP014773.1\|WP_067190284.1\|2265746_2266469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190302.1\|2274673_2275630_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP014773.1\|WP_157532089.1\|2260140_2261133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190280.1\|2264120_2264573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190268.1\|2259125_2260100_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_157532307.1\|2270837_2271935_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.00627e-77
NZ_CP014773.1\|WP_067190264.1\|2257156_2258497_+\|hypothetical-protein	gnl\|CDD\|271323	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	6.0515e-112
NZ_CP014773.1\|WP_067190282.1\|2264569_2265472_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	9.6707e-51
NZ_CP014773.1\|WP_067190298.1\|2272192_2273944_+\|family-43-glycosylhydrolase	gnl\|CDD\|350096	cd08982, GH43-like, Glycosyl hydrolase family 43 protein; uncharacterized. This glycosyl hydrolase family 43 (GH43)-like subfamily includes uncharacterized enzymes similar to those with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	9.14191e-156
NZ_CP014773.1\|WP_067190302.1\|2274673_2275630_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP014773.1\|WP_067190278.1\|2263299_2264052_+\|DUF72-domain-containing-protein	gnl\|CDD\|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	1.2204e-75
NZ_CP014773.1\|WP_067190288.1\|2267992_2268376_+\|DUF3037-domain-containing-protein	gnl\|CDD\|378608	pfam11236, DUF3037, Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	2.80987e-63
NZ_CP014773.1\|WP_067190304.1\|2275769_2277158_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.99875e-42
NZ_CP014773.1\|WP_067190294.1\|2269411_2270254_+\|ThuA-domain-containing-protein	gnl\|CDD\|377643	pfam06283, ThuA, Trehalose utilisation. This family consists of several bacterial ThuA like proteins. ThuA appears to be involved in utilisation of trehalose. The thuA and thuB genes form part of the trehalose/sucrose transport operon thuEFGKAB, which is located on the pSymB megaplasmid. The thuA and thuB genes are induced in vitro by trehalose but not by sucrose and the extent of its induction depends on the concentration of trehalose available in the medium.	1.02553e-36
NZ_CP014773.1\|WP_067190292.1\|2268919_2269390_+\|lipocalin-family-protein	gnl\|CDD\|372661	pfam13648, Lipocalin_4, Lipocalin-like domain.	0.00182706
NZ_CP014773.1\|WP_067190276.1\|2262262_2263249_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	6.43036e-173
NZ_CP014773.1\|WP_067190272.1\|2261209_2261794_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.15234e-34

>NZ_CP014773.1|WP_067190284.1|2265746_2266469_+|hypothetical-protein
MKKILLMITMVLGLSVLAQAQTKQHNGHGTPAKKAEHLTKMLQTKLNLSADQSTKVNEILLARATQMDSLRAKKTGDKQINRQAVKSLLTKTDGELSAVFNADQNKTYTELKTQMRNKFKGGKGLIAKNGRGRAHNPAEKAQRLTGMLQKKLNLSADQSAKVNTILLNRATRMDSLKNNVAADDKKINRKSRRLIMQQTDQDLKTVFNADQLKTYDQVKSEMKERHKNKKDVMAAPADGK
>NZ_CP014773.1|WP_067190282.1|2264569_2265472_-|mechanosensitive-ion-channel-family-protein
MDINKAYQLITQKLYTWLRDLIKLLPNIILAAIILVIGLYLAKVLKNLVAKLINRLSIHTSLNNLIISIVYIALIGITLFTVLSVLNLGQAVTTLLAGAGIIGLALAFAFQDIAANFMSGVLILFRKPMNVGDTVELKGYMGKVAEINLRDTVIRTFQGQMVIIPNKDVFQNPIENFSILGKRRIDMEIGVSYGDDLEKVKEITLAAVKGIPGISEEDETTMFYTSFADSSINFIMRIWVSTIDPMAFLEVKSEAIIRIKKAYDETGIMIPFPIRTMDFGIKGGVPLSEMKVVTEDEKQA
>NZ_CP014773.1|WP_067190280.1|2264120_2264573_+|hypothetical-protein
MRRLSYSLIVLSTLSFFIATGCKQAGKGSAGKADSVKADSSSGLKATSSKTGKLVGAWHDETIKSDKGEQIAYEVISSGSKVYIQAITFVGTNLKLNDTPPITDSASEIVKDGDKYHSVERPTEIYVVDKSGDLLIYDGTELVAKCKRLI
>NZ_CP014773.1|WP_067190278.1|2263299_2264052_+|DUF72-domain-containing-protein
MNKQGKYYSGTSGLTLPVPNKSLYPAEYQVKSRLYYYASLFSSIEINSSFYKLPMPKTVSKWAAEVPCNFRFTYKLWRNITHNKGLAFDSADIACFMHIINQAAEKKGCLLVQFPPSITIASRVQLEKLLQLLYDANTGGWHIAIEFRSKTWYRDDIYSLLRRYQMGVVLHDMPKSAPPMLEQEVPFVYLRFHGPGGSYRGSYPDDFLVEYAQYIQTWQEEGKAVYVYFNNTMGDAVKNLQTLNSFVANG
>NZ_CP014773.1|WP_067190276.1|2262262_2263249_+|aldo/keto-reductase
MNYRNLGNTDVQLSTIGLGCMGMSHAYGEPDDVESIATLNKAIELGINFWDTADVYGNGQNESLISQVLKPNRDKIFIATKFGFRAAADGKLSTFDGSPAYMKTAVEASLTRLKTDVIDLYYAHRIDPNVPVEEMVGAMADLVKEGKVRYIGLSEASPNSVRRAHAVHPISALQSEYSLLTRDVEKEIIPLCKELKISFVPFSPLARGLVTNTLKLDELKEGDFRKSLPRYQQGHAANNQNLAQGFAEIAEGLGCTPAQLAIAWVINQGENIIPIPGTKKRKYLEENAGSVDVQLNGENLEAIEALLKKYPDTGERYNEGNWKFVDRN
>NZ_CP014773.1|WP_067190272.1|2261209_2261794_+|TlpA-family-protein-disulfide-reductase
MRKNWFSKSNILNAVFILTLLSVIFVPTVKTLMIRGLMSIGFFNPDVSKAATSKRVAVSDLIFSDPAGQTLSLHNLKGKVVVINFWATWCPPCRAELPSLNSLYEKFKANKDIVFITVDADGDFAKSAGFLQSNGYTLPLYKIASNVEESVYAGTLPTTVIIDTEGKMVLRHQGAADYDSKRVIDLLKSLIAKN
>NZ_CP014773.1|WP_157532089.1|2260140_2261133_-|hypothetical-protein
MIRLNYHLSPLYLVLLVFATGCSNEIGSWRNDQIKASKRDDLHELNNKVFNYIKAGDTKGMEGLLSKELLTSNSIDAAVKNIGHRMTTDTFAKSDEYYTINKYIERDSIKGQATGDNAYKLIYHAYAQEMYMVFYTPTGKDVQNKIMVTAIYANYEYGWKLSFLEFQPYTLNGKTAPELFKLAKSYYSKHYLMDALSYANMANSTLRPSAIWLYNIDGDVLSFRNKLQEEADKKYKFPVVLADLPGKPRILGIFNKMTNEGNFPIVSYQTKISLKDTAAVRKENIQMRKVISVLIPGLEKNNKYIYYQSYNELPNYNAQVYHFDLMDKRW
>NZ_CP014773.1|WP_067190268.1|2259125_2260100_+|hypothetical-protein
MIAVKIEAGFLKTISWLGDKIIDWACGGVLYDCRGKVKESVYYNLPFNFNAAITSADGTYAFVYSKLGTKGVLLKNGKELREINRPYYCANAFEYPAAFTTLDDVTYLIHCPLRYDRLDFENVETGKIVTNKKGRKNSDTFHSRLETSPDGNLLICRGWVWHPRDVVEIYDIRDCLLKPAHLDRKTLYPDIGVEICTASFINDSLILIGSTDEVYDDEQSCDFSKKLAIWDVKSDTIISHTNVNAEFGNLFVIDDTYAWDLFIYPKIVNFKTGEIVDEDRTIDSGRQNSSIIGDGTPQIIYNRQTKQIAIARNESIVILTPGII
>NZ_CP014773.1|WP_067190266.1|2258640_2259093_+|hypothetical-protein
MTDFEEPVYAVTAASPKVYQPNMIRVATFIGGPLVAGYMIAENFKAFNAYDKAKKTWLYTIVFTIALFGLAAAIPASVNIPRIVFPVIYAWSAYGLVNQYQGKMIAAHINNNGEAFNWGRSIVIGLIGMVVLLVLIAVPLFLYYSMYSGV
>NZ_CP014773.1|WP_067190264.1|2257156_2258497_+|hypothetical-protein
MKKLSFITQSFLIIAIAGLVACNKSTDDTATPVLNTTDVVIDAAGTTAYSGGILSSTSAATAYGVCYSSTNHEPTTADSTKSVAVTYSSFSNTIPYLLPNTTYYLRAYATYLTKTGYGEVIQFNTGSNLSATFGQVSTYAGSLAGGLSNGPLLTAQFDNPMGIAADAAGNLYIADSFNCAIRKISTGGAVTTVAGSGSLGYANGTGNAAQFYSPSALVVDATGNIFVADRGNNAIRKITPSGVVTTFAGNGTAGYTDGTGEAASFNTPSGIAIDPSGNLVIADAGNNLIRKITPAGVVTTVAGSRTAGYLNGTGTAANFNKPAAVAIDAAGNIYVTEATNSAIRKINADLLVTTFAGGPGINSLLGSPNALSIDASGNFWISDGSGRILKINTDKKLLVMAGTSGTTGATDGAGNVALFNGPTGVLATSSGVYVADFGNNEIRKIN
>NZ_CP014773.1|WP_067190286.1|2267220_2268015_+|aminotransferase-class-I-and-II
MSITPPQLRTVNVTRYVTPLREGGSLPAIAEADDGFLYVLKFHGAGQGPKALIAELIGGEIARVLGFRMPELVFVNLDEAFGRTEPDEEIQDLLKFSVGLNLALHYLQGAITFDPTVTLVDEKLSSQIVWLDALLTNVDRTPRNTNMLMWHKELWLIDHGAALYFHHSMDNWEEQSRRPFVQIKDHVLLKKASELEQVDAEFKAILTPEQIDAIVSIIPDAWLTDRSFETEDDQRQVYARFLKSRLANSGIFLKEAQDARSLLI
>NZ_CP014773.1|WP_067190288.1|2267992_2268376_+|DUF3037-domain-containing-protein
MQDRYLFEYAIIRVVPRAEREEFMNVGVILYCAKHKYLRMMYKVDRARLTALFKDLDLDNLEDNLDSFQRISNGGADAGPIGLLDAPSRFRWLTATRSTVVQTSKVHPGFCIDGDETIERLYQQLVL
>NZ_CP014773.1|WP_067190290.1|2268372_2268900_+|hypothetical-protein
MSRNRVVDIKFFLIIIPLAVSWLGFNSCHRAQKKVDPFYINRGEWDDYEIPLLKPYKLINLNGMKEWSMNLESDSVLMYLGSSIQNIEKANVIDGVICLYSSKTIVNAKLPMRLIWAVIIPSKKTEKGFISHASYIEYLKEIGFSTEPGLYNVEDILKYAGQNDVINWKEIRSNN
>NZ_CP014773.1|WP_067190292.1|2268919_2269390_+|lipocalin-family-protein
MKLKFLFIPMVAFAACKQTAKDAFVVTTDSAPIQGTWKLIAAVTVTKGDSVVTYPVKGQEDEMIKVLNGDHFAFFKHDLKKAGSKPVFDSGAGTYSFKEGNYTENLQYCNYREWEGHSFDFKVTFKGDTMQQKGIEKIDSLKIDHEIVETYIRIKK
>NZ_CP014773.1|WP_067190294.1|2269411_2270254_+|ThuA-domain-containing-protein
MNSSLKTKAIGLCIACVFVVTGIFAQGNPKFRVIAFYTAKSDQAHISFVHEANKWFPLMAKKYHFAYDSTNNWSNLNAAYLSKYKVVIFLDTRTEDTAQRAAFEHYMKNGGGWMGFHFSAFALTPSDFNADWDWYHNQFLGSGQYVSNTWRPTSAILKVADSKHPATKSLPVTFKASPNEWYRWEKDLRQNPDIRILASIDSRSFPLGTGPKPNEIWHSGYYPVVWTNRNYKMIYFNMGHNDIDYQGKTNKDLSHTLGNPVEDKFIINALLWMGMGNKVK
>NZ_CP014773.1|WP_157532307.1|2270837_2271935_+|alpha/beta-hydrolase-fold-domain-containing-protein
MGAVACKSNSSSSSATDSVNTDSSVSSSADTTKKAEIKPRGDAPAWAPDIKPEMQAVIEKLASYGDKPIPELTAVEARKNHTPTDAVMDLMKENNIPKPVFNVDTMGKDIPVDGGSIHARIYVPKTGKSNYPVIVYYHGGGFVIANLDVYDASANVLADKVGAVVVSVAYRLAPEHKFPIAHNDAFAAYKWVLANAAAIKGDAKKVAVAGESAGGNLAINTAIKARDTKIMLPTAIVAVYPVAGSDMTTKSYVKNAAAKPLDKPMMMWFVKNYLNNMGEGKDPRINLVAANLKGLPPTTVITDEIDPLQSEGMTLVEKLKDAGVTTDSKNWDGVTHEFFGMGAIVPEAKDAEMYAVDQLKKAFGM
>NZ_CP014773.1|WP_067190298.1|2272192_2273944_+|family-43-glycosylhydrolase
MKVTILITLFVCCFAFGTSAQTKRLTYCNPLSLDYGYTPFENFAAWGKHRATADPTVTLFKGNYYLFSTNQFGYWFSPDMLSWKFVPRKFVRPYNQVKGDELCAPATLVLGDTLLVIGSTYNKDFTLWMSTDPTHDTWKAAKDYFQVGAWDPGMFADDDGRVYIYHGSSNTLPLYGQEIDRKTFEPIGPKKEMIRLNWQEHGWERFGENNDNVFLTGFMEGSWMNKHNGKYYLQYGAPGTEGKGYGDGVYVGDQPLGPFKYQSHNPFSYKPGGFAKGAGHGATWADKYGNYWHISTMVVDVKNNFERRIGFWPAGFDDDGILYTNTAYGDYPHYLSAGKEDHLKSNFTGWMLLNYNKPVQVSSTLGAYVPNLAVDEDIKTYWSAKTGNQGEWLQTDLGEVSTVKAIQLNYADQDATFMGKSLGVFHQYLISSSIDGRTWKPLVDKRQNKTDVPHDYVELKTAAKARYLKITNYHMPTGKFALSGFRVFGKGAGAVPDTVKNLIVLRGKEENRNSWLRWRQTDGAVGYTIYVGIAPDKLYNNIMVYNVNEYYFNGMEKNVSYYFQIEAFNENGISKRTKVIKVE
>NZ_CP014773.1|WP_067190300.1|2274252_2274627_+|hypothetical-protein
MKGQDQYHMSLVADLNGFPSAQKALKYKKELDLSPAQITALTKINTELNRKKIEMGGFIVKNESKLDELFQSKKLTEGDVLFYGNRSGLYYGELRNAILMAAYKTYNLLALQQVNKLKGYKNDN
>NZ_CP014773.1|WP_067190302.1|2274673_2275630_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MKITFDFEKPLAELQGQIEKVQQVEEKNKLDMSATIAELEAKMEAAKKEIYSNLSGWQKVQISRHPERPYTLQYIELMCDDFIELHGDRTVGDDKAIIGGFGTLNGQTVMFIGHQKGRNTKERQYRNFGMANPEGYRKALRLMKMAEKFGKPVVTLIDTPGAFPGLEAEERGQGEAIARNLLEMSVLKVPVICVIIGEGASGGALGIGIGDKVMMLDNSWYSVISPENCSTILFKTWEQKERAAEMLKLTSSEMLKNKLIDGVIKEPLGGAHQDPVAMAATLKKQLIKDLKVLTERNIDELVTERIDKFCNMGVVVEE
>NZ_CP014773.1|WP_067190304.1|2275769_2277158_-|serine-hydrolase
MNNIYKTPFAIFLLILGTATVFAQNKATLIDSMIHRTNRNGLFSGNILVVDNGKTIYKSAMGYTDASRTAPLTESYRFHIGSIAKEFNAVGIMILAEQGKLKLDDKVSQYLPQLPAWVNTISIKNLLQYTSGLPDIKWKTVKGDADIMADLLKTDSLNFKPGTSYDYNNMNVFVQRRIIEKITGMPFNQFVVEKELKPAGMNTAIVDPVESTPLMAISYNNDYKTGALIYPITGWVAVTLDDFYKWELALEQFKLISPASTRILLTPIGPGKQCGLGGGAMDANKILFHKHDGISINYQAILVGQPKKGRVVILMTNNRQNNIFDIDDAIENILDGKPYSQPKRSVGNDFKRDLDTLSGEQIVTFYKQLKQKDPEKYAFDKEATLNEIGYGLLNAKRTDDAITVFEYNTKLFPASGNVFDSLGEAYYNKSDKAKALLNYKRSVALNPTNNAAKAIIGELEKK

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Crispr_ID: NZ_CP014773_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_6

2553570-2553700

Orphan

Consensus_repeat	Method
CGCCGTTGTTGGTGTTTTCGCCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP014773_6

>merge|NZ_CP014773|6|2553570-2553700|CRISPRCasFinder
TGCCGTTGTTGGTGTCTTTCCTAAGTTGTTGGTGTCTTTTCGCCGTTGTTGGTGTTTTCGCCAACAGCCATCAGGACGGTCACCGCTATGCAGTCACTAGTGTGATGCCGCCGTTGTTGGTGTTTTCACCA

>NZ_CP014773|6|5|2553570-2553700|CRISPRCasFinder
TGCCGTTGTTGGTGTCTTTCCTA	AGTTGTTGGTGTCTTTT
CGCCGTTGTTGGTGTTTTCGCCA	ACAGCCATCAGGACGGTCACCGCTATGCAGTCACTAGTGTGATGC
CGCCGTTGTTGGTGTTTTCACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067190765.1\|2558749_2560081_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP014773.1\|WP_082800284.1\|2550037_2550781_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238448
NZ_CP014773.1\|WP_067190738.1\|2542261_2542630_-\|response-regulator	unknown	unknown	gnl\|CDD\|381164
NZ_CP014773.1\|WP_067190754.1\|2554105_2555227_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP014773.1\|WP_067190757.1\|2556963_2557521_-\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP014773.1\|WP_067190768.1\|2563295_2565104_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP014773.1\|WP_067190750.1\|2550908_2551655_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP014773.1\|WP_067190763.1\|2558318_2558675_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378971
NZ_CP014773.1\|WP_157532103.1\|2557591_2557930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_082800283.1\|2548418_2550023_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_CP014773.1\|WP_157532102.1\|2555412_2555571_-\|lmo0937-family-membrane-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190752.1\|2551794_2553432_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143441
NZ_CP014773.1\|WP_067190766.1\|2560496_2563193_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP014773.1\|WP_067190748.1\|2547949_2548282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190755.1\|2555747_2556845_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238869
NZ_CP014773.1\|WP_067190744.1\|2545795_2546212_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP014773.1\|WP_067190742.1\|2544480_2545596_-\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349906
NZ_CP014773.1\|WP_157532104.1\|2558024_2558300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_082800282.1\|2546310_2547852_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|130187
NZ_CP014773.1\|WP_067190740.1\|2543505_2544405_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|274908

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067190765.1\|2558749_2560081_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.07097e-69
NZ_CP014773.1\|WP_067190757.1\|2556963_2557521_-\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	2.68445e-67
NZ_CP014773.1\|WP_067190738.1\|2542261_2542630_-\|response-regulator	gnl\|CDD\|381164	cd19937, REC_OmpR_BsPhoP-like, phosphoacceptor receiver (REC) domain of BsPhoP-like OmpR family response regulators. Bacillus subtilis PhoP (BsPhoP) is part of the PhoPR two-component system that participates in a signal transduction network that controls adaptation of the bacteria to phosphate deficiency by regulating (activating or repressing) genes of the Pho regulon upon phosphorylation by PhoR. When activated, PhoPR directs expression of phosphate scavenging enzymes, lowers synthesis of the phosphate-rich wall teichoic acid (WTA) and initiates synthesis of teichuronic acid, a non-phosphate containing replacement anionic polymer. Members of this subfamily belong to the OmpR family of DNA-binding response regulators, which are characterized by a REC domain and a winged helix-turn-helix (wHTH) DNA-binding output effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.20805e-27
NZ_CP014773.1\|WP_067190754.1\|2554105_2555227_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.44597e-42
NZ_CP014773.1\|WP_067190768.1\|2563295_2565104_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.92133e-76
NZ_CP014773.1\|WP_082800284.1\|2550037_2550781_+\|carbonic-anhydrase	gnl\|CDD\|238448	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	3.45589e-111
NZ_CP014773.1\|WP_082800283.1\|2548418_2550023_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	9.50689e-92
NZ_CP014773.1\|WP_067190763.1\|2558318_2558675_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378971	pfam12844, HTH_19, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.	1.46749e-05
NZ_CP014773.1\|WP_067190752.1\|2551794_2553432_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143441	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.	0
NZ_CP014773.1\|WP_067190755.1\|2555747_2556845_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238869	cd01831, Endoglucanase_E_like, Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.	2.91022e-37
NZ_CP014773.1\|WP_067190744.1\|2545795_2546212_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.23853e-13
NZ_CP014773.1\|WP_082800282.1\|2546310_2547852_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP014773.1\|WP_067190766.1\|2560496_2563193_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP014773.1\|WP_067190750.1\|2550908_2551655_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	5.66912e-30
NZ_CP014773.1\|WP_067190742.1\|2544480_2545596_-\|M42-family-metallopeptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	3.45224e-136
NZ_CP014773.1\|WP_067190740.1\|2543505_2544405_-\|nucleotidyltransferase	gnl\|CDD\|274908	TIGR03992, Arch_glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Many of the genes identified by this model are in proximity to the GlmS and GlmM genes and are also presumed to be GlmU. However, some archaeal genomes contain multiple closely-related homologs from this family and it is not clear what the substrate specificity is for each of them.	2.52919e-10

>NZ_CP014773.1|WP_067190752.1|2551794_2553432_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MLKGFFNVPAPVNEPVLNYGPRSLERAALKAALTEARAQQLDIPMYIGGEEVRTGKLVELRPPHDHKHLLGVFHYGDKTHVNAAIDAALAAKADWENLPWEQRAAIFLKAAELIAGPYRATINAATMLGQSKNAYQAEIDAACELIDFLRFNVQYMTEIYAQQPPVSGKGVWNRLEQRPLEGFVFALTPFNFTAIAGNLPASAAMMGNVVVWKPADTQVYAANVIMQIFKEAGVPDGVINLIYADGPEVGEVVFNHPDFAGIHFTGSTKVFQHIWQTIGTNIHKYKTYPRIVGETGGKDFVLAHPSANADAVAVALLRGAFEYQGQKCSAASRAYIPASLWPAVKEHVQREIATFKIGPVEDFENFVNAVISEVSFDKLAKYIDAAKKDEGVELIAGGNYDKTQGWFVEPTVLQVQDPYYVTMCEELFGPVLTVYVYEDDQWDATLSIIDQTSIYALTGAVLSQDRYAIADATYKLRNAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGSMINLLRWVSPRTIKETFDSPKDYRYPFLQKEM
>NZ_CP014773.1|WP_067190750.1|2550908_2551655_+|DUF1275-domain-containing-protein
MLKEPKEKRTLKQNLLLASSTAFVAGITDVVGVLAFLAFTSNITGHVANLAKNIIEQNFQSILVFGFWLFMFLLGAFVSNFIVKSLQHVSYYRAHSAPIILEIFVLLFIAFYGNSFYKETSQEREIVIGALLFAMGLQNSLVSNISGGLIKSTHLTGLFTDLGSELADWMHPKTAESQEVKNKIYVRLTILAFFIFGGLVGGYFFNIYQFKIFYFLPVILLTILYYDMVPFIWYRITRLFISNKKSIT
>NZ_CP014773.1|WP_082800284.1|2550037_2550781_+|carbonic-anhydrase
MSTIETENNSQSGQANNRSPATVSDTTLTQQASYDKLLKGNAEWVERHLSEDPQFFTNLAKGQQPEILWIGCSDSRVPANDVTGTKPGEIFVHRNIANVCNHSDMNMLSVLDYAVNVLKVKHIIVAGHYGCGGVAAALSNKQFGLIDNWLRHIKDVYRLHSHELDRIADKAEKINRLVELNVSEQVYNLCKTSIVQNAWMERTDLQVHGWVIDLGSGLVKDLKVTSSSPNNLGYVYELHGVEAIVAH
>NZ_CP014773.1|WP_082800283.1|2548418_2550023_+|SulP-family-inorganic-anion-transporter
MQIKQGGLTTGDLNLKKYFLGKNLKRDLPASLVVFLVALPLCLGIALASGAPLFAGILTGIIGGVVVGVFSGSQLSVAGPAAGLTVIVLNTIHTLGSYETFLLAVFIAGAFQILLGLIKAGTIANYFPSPVIEGMLAAIGIILIMKQFPHAVGYDADFEGDEGFSEAGAGNNTFSALTRALGKINYGAVIIAGVSLLLMIYWPKIKRVAMVPAPLLVVLSGVALSLAFAGTDLALQAKQMVNIPMVKSSGEFFALFKSPNFGEIANKQVWIAAFTIAVVASLETLLSLEAVDKIDPIKRISPTNRELIAQGAGNLVSGLLGGLPMTAVIVRSSANVNAGARTKVSAIVHGLMLLLSLLFIPSLINHIPLSCLAAILLMTGYKLARIGLFKHMWHKGLDQFIPFVVTIVAVVLTDLLIGVGIGMLVGIFYILRTNMRNPYFYTITTKGDKKTITIRLAEEVSFLNKAAIQVTLTSLPKGSDVIIDGSNSRFIDPDVLEIIHNYKHNAYTKGIIVQLVDIQDRYQVPSLKDLVYKP
>NZ_CP014773.1|WP_067190748.1|2547949_2548282_+|hypothetical-protein
MKIRDLKISVVILFMSIFVAKMVIAIAPAFLCLDNKSVSAVIMQLEHETKSEKEDPDKDAFKEKKIFDETFLHFVVYKTFVVENNVLHNQEHSLYAEIYHPVVPTPPPNA
>NZ_CP014773.1|WP_082800282.1|2546310_2547852_-|acyl-CoA-carboxylase-subunit-beta
MDKKLEILEQKRQIALEGGGSARIESQHKKGKLTARERLHFLLDEGSFQEIGMLVSHRSTDFGMEKEKYPGDGVVTGYGTVNGRLIYVFSQDFTVFGGSLSETHAEKICKIMDLAMKNGAPIVGLNDSGGARIQEGVVSLGGYADIFYRNTMASGVVPQISAIMGPCAGGAVYSPAITDFTLMVEHTSYMFVTGPNVVKTVTHENVTSEELGGANTHATKSGVTHFACTNEIDAIQHVKKLLSYMPQNCEDHAPALPYEPGNETRDALTTLLPENNSQPYDIREVIDQVLDNDTFLEVHKDFAENIVVGFARLAGRSIGIVANQPAFLAGVLDINSSTKAARFVRFCDSFNIPLLVFEDVPGFLPGTDQEWNAIITNGAKLLYAFCEATVPRITVITRKAYGGAYDVMNSKHIGADMNYAWPTAEIAVMGARGAAEIIFKREITAAEDPEAKWREKEQQYAEIFANPYRAAERGFIDEVIAPAETRIKLIQAFKMLENKVVNNPRKKHGNIPL
>NZ_CP014773.1|WP_067190744.1|2545795_2546212_-|GNAT-family-N-acetyltransferase
MLSIEQITPYLTWRVRRDVLYPGKYIHDMEMDEDNDGYHFGAFKDNELVAVVSLFAKEHNWQFRKLAVIDKVQNQGVGTELLKYITGFVEQENGKRLWCNARLSAVGFYNKLDFSTAGEVFHKNDIDFIVMQKELISK
>NZ_CP014773.1|WP_067190742.1|2544480_2545596_-|M42-family-metallopeptidase
MAKKKTDAEQKPAIVTNKSLEFFEKYINNASPTGFEWKGQQLWLDYLKPYIDDYYVDNYGTAVGVINPTAAYKVVIEAHADEISWFVNYITNDGLIYVIRNGGSDHQIAPSKRVDIHTDNGIVKAVFGWPAIHTRLGGEKEEAPTLKNIFLDCGCTSKDEVEKMGIHVGCVITYEDEFMILNNRYYVGRALDNRAGGFMIAEVARLLKENNVTLPFGLYIVNAVQEEIGLRGAEMIAHRIKPNVAIVTDVTHDTNTPMINKITQGDLSCGKGPVISYAPAVQNNLNKLLIESAQKANIPFQRQASSRSTGTDTDAFAYSNDGVPSALISLPLRYMHTTVEMIHKDDVDNVIRLIYECLLNIKAGQDFRYIK
>NZ_CP014773.1|WP_067190740.1|2543505_2544405_-|nucleotidyltransferase
MKPTLLILAAGMASRYGSMKQVDGFGPNGETIIDYSIYDAIQAGFGKITFIIREEFLDSFKAIFEPKLAGKIETDYVFQNYDLTQFGITEEVERAKPWGTAHAVLAARNQVNEPFCVINADDFYGYDAFKKMADFLSNEVADDKYAIIGYQVDRTLSDHGSVSRGVCQVEDGKMVAINERLKVYFKEDGTVAYEEDDKEFPLDPLTRVSMNFWGFTPAVFEQSLPMFKAFVEKNKSNPKAEFFIPLVADGLITTGEASFEVIPTDAKWFGVTYKEDKPIVQKSISALVENGTYPTNLWS
>NZ_CP014773.1|WP_067190738.1|2542261_2542630_-|response-regulator
MRRILAVDDDKDILEVLQFILEDSGYEVDTLSDGHNLMDIVRNKMPDLILLDIMLGNMDGRELCKAVKKESSTHNIPVILISASHNISSSMNNEGAPNDFIAKPFDINNLLGKIKSHLSSAA
>NZ_CP014773.1|WP_067190754.1|2554105_2555227_+|AI-2E-family-transporter
MDIAQFKTLPFYLKLACVLFSLISLVYIVIVAKEILSPLIFSSLFAILLLPLAQFLEFKVRLPRSAASMLSVLMLLGAIGLILYVIGSQISGLAKDWPQFQLQLTKSVESIQDWVTNTFHVDARKQLTYVDTAKSKIMESGSSVVGATLLSLSGILLFLVFTFIYTFFFLLYRKLIMRFFESVFLDENKSLVHEIVEQVQYIIRKYIIGLLIEMGIVAGVVCLVFWALGIKYAILLGLITGLFNIIPYIGIFTALVISALVTFATATVVSKVLLVVITLVVVHLIDSNVLLPLVVGSKVRINALITVLGVIMGEMIWGIPGMFLSIPVIAVMKIIFDRVESLKSWGIILGDEEHKQNRLAQKMTTKRQKIVKE
>NZ_CP014773.1|WP_157532102.1|2555412_2555571_-|lmo0937-family-membrane-protein
MRSLLYIVAVILIIGWAISTFAYAAGGLIHILLVIAIIAFVLGLLRKDTTVV
>NZ_CP014773.1|WP_067190755.1|2555747_2556845_-|SGNH/GDSL-hydrolase-family-protein
MKLKYYLLLFCAPLFISTAFAGADQTDTLTAKKLNPYGRYYYNANKELELISSAVHFGFSFEGTTCKIYTSLPDEHAHSYLQYELDGVYQKRIRVEGNPKEPITIIAPTAGKHEVWIYKCTEAATGAILISKIAAEHIKSLKPSKASLIEFIGNSITCGAAADASDIPCGTGDYHDQHNAYMAYGPRLARKLGANYMLSSVSGIGVYRNWNSDAPTMPQVYEKVNFQDNTPLLWDFSTYSPKVVSIALGTNDFSNGDGKRPRKPFDAVEFTATYVKFVKLVKSKYPNARIALLSSPMVKFQNAKLLEDCITAVRDKINAAYPKSKPAQVFFFPPMEAHGCGGHPSVEDHAVMADQATAFFKKLLE
>NZ_CP014773.1|WP_067190757.1|2556963_2557521_-|arylesterase
MQQILFLGDSLTAGYGLANSSTESFPALINEKIRSETLPYQIINAGLSGDTTSGGRSRIDHWLTRQVDVFFLELGINDIRRGVAPGTIELNLQAIINKVKAKYPDARLVLLGMEIPAFLGGQIAIEFSAIYRKLAEANHMALVPFLLEGVAGKKHLNLWDRVHPSAAGYKIVADLVWPVLKSVLI
>NZ_CP014773.1|WP_157532103.1|2557591_2557930_-|hypothetical-protein
MGPIFFTVGSDLPVMIIPNTDGHVNGHPVLTYTYNVYRDVGFEDASMIKIKEKELLLDKKTSKNYMGYITFESPGKLFTYTADGNEDLSSDEVQEIIENITHFREHPGMWQI
>NZ_CP014773.1|WP_157532104.1|2558024_2558300_+|hypothetical-protein
MMPFKLTDNLVLTIEANEQKVRLVITNGNIELACRKATKASIKQFLKSTTEKLFNGRLQLHKHSNVLAIILKGDMVGEIDPAAFEQMLNLD
>NZ_CP014773.1|WP_067190763.1|2558318_2558675_-|helix-turn-helix-transcriptional-regulator
MSDDAVVKRIKVIVKEHGGQLALANAIGVDQGFISKVINKKQDISYYLIRKLCFQLKYSPEWLILGTGEKNIHKPESAKLITEIQMLRTEVDILHARMRAYELEMQEIKLSLPRQQAG
>NZ_CP014773.1|WP_067190765.1|2558749_2560081_-|MBL-fold-metallo-hydrolase
MIVNQFYDKGLAHASYAIIRNGRMIVIDPARDPQPYYDFAEIHSADILGVIETHPHADFVSSHLEIHQTTGAIIYVSKLTGAGYPHETFDDGDVITLDDIKLKAINTPGHSPDSICILLEDEKGKDCAVFTGDTLFVGDVGRPDLRESAGNITAKKEELAQAMYHSTRGKLMLLPKDVTVYPAHGPGSLCGKNMSPDLQSTIGKELRDNYALQLMDELKFVKTLLADQPFAPKYFGYDVELNKTGAPNFADSVKSVRKLHHDTGLEDDILVVDTRTSSLYRKGHVRASINLQDGEKFETWLGSVVGAEELFYLIAATEEDLDVVIKKTAKIGYENNIKAALLTPESATVASPDIQLDDFKNYPANYTIIDARNWAEINTGKIFSDALTIPLPELRERIGEIPSNKPIVVHCAAGYRSAAAASIIAAKITEVPVFDLSEAVKEF
>NZ_CP014773.1|WP_067190766.1|2560496_2563193_+|valine--tRNA-ligase
MIIAKTYSPKEAEEKWYGYWLKHNFFRSVPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQDVLIRRARMKGKNACWVPGTDHASIATEAKVVAMLKERGIDKKDLTREEFLSYAWEWKEKYGGIILEQLKKLGASCDWERTKFTMDADMSESVNDIFIRLYKKGLIYRGVRMVNWDPQGKTAVSDEEVIRKEVNQKLYYIKYQVSGIKYQDGVNEAAGESNDLIRDTKYVTVATTRPETIMADAAICVNPNDERYLHLHGKKVFIPLINREIPVILDEYVTMDFGTGCLKVTPAHDLNDYELGQKHNLQIIDILSDDGTLNEKAEILVGVDRFSARKEIAVLLEEAGALAKTEDYTSQIGFSERTNAVIEPKLSMQWFLKMQEMAKPALDYVLNGEVKLIPEKFINTYRHWMENVRDWNISRQLWWGQQIPAYYLPNGQHVVGKTKEEALEEAKKINEELTLEDLRQDEDVVDTWFSSWLWPVSVFDGVRNPDNAEINYYYPTNDLVTAPEILFFWVARMIMAGHELRGQKPFTNVYLTGIVRDKQGRKMSKSLGNSPDPLDLIEKYGADGVRVGMLLCSPAGNDLMFDESYCEQGRNFANKIWNAFKLIQGWAVDESLPNTNQIAIEWFESRFNQALVQIEDDFKQYRLSEALMATYKLVWDDYCAWYLEMVKPVYKPGAEKQTIDAATYAATVGFFQNILKVLHPFMPFLTEELWHDELFGLRDDLDCCIVAQLPSSGQINSQLIAEIEVIQQIIQQVRNVRNTKQLSPKDALPLAIKVNSVIGYNRYQPIIKHLGNIDEFTIVDEALNNAVNFIAGTDEFYVALNIEIDLEAECERLKKEQDYLLGFLRAVDGKLNNERFMANAKPEIIENELKKKADAESKLKTVADNLHGLAC
>NZ_CP014773.1|WP_067190768.1|2563295_2565104_+|response-regulator
MEFFNFSIYKILSRDQSILDQARIRLLYYGFALVFIALGALFISVYLQGLPLLSATSAVLMFCVAALFKYLTFKPHWRNISHILLIIGSIVNLSMVFIVMQDVDIIVIQVIILVIVFSFYMLGLNWGMFYSLLNLLPVLVFLVMVYDHNYYINFKPEKVDQATIIIGVFANFMLIIFIHSHFYTAFLKNIKQLKDTSEEQAALNIKFEKAIAKAEKSSQVQSEFLSTMSHEIRTPLNAVIGMTNLLMMNTPRTDQSENLNILKFSANNLLAIVNDVLDFNKIESGKIVFEKIKFNLADLLHNICGGQMIKAEEKGLLFNLDIDSALRRKVIFGDPTRLTQIIFNLTSNAIKFTSAGGVGVRVTCIEDRHNNITVSFSVKDTGIGIKKENLERIFEPFTQESITTTRQYGGTGLGLAIIKRLLELQGLQMEVVSVVGEGSEFSFNMEFPVATEAAALPVQKQQLPQSAPQTPIFGSANLRVLIAEDNQVNVMLMKKLFSKWQIVPTIAENGERAVEIMQYGNFDIILMDLQMPVMNGFDAAIEIRKMPDPAKSRVPIIALTASALFDIKNQVTDAGMNDYVAKPFKPDELMEKIQILVSAKII

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Crispr_ID: NZ_CP014773_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_7

2630863-2631015

Orphan

Consensus_repeat	Method
TACCCCCGCCGTCATCCCGAACTTGTTTC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP014773_7

>merge|NZ_CP014773|7|2630863-2631015|PILER-CR
TACCCCCGCCGCCATCCCGAACTTGTTTCGGGAACCCCACAGGACACGCCCCCAGCATGCATTCCCTACACCCGCCGTCATCCCGAACTTGTTTCCTTACCCACAGGACGGGTTGCCAGCATGCCCCCCCCGCCGTCATCCCGAACTTGTTTC

>NZ_CP014773|7|2|2630863-2631015|PILER-CR
TACCCCCGCCGCCATCCCGAACTTGTTTC	GGGAACCCCACAGGACACGCCCCCAGCATGCATTCCC
TACACCCGCCGTCATCCCGAACTTGTTTC	CTTACCCACAGGACGGGTTGCCAGCATGC
CCCCCCCGCCGTCATCCCGAACTTGTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067190879.1\|2621255_2621912_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|182775
NZ_CP014773.1\|WP_067190874.1\|2618445_2619570_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|238082
NZ_CP014773.1\|WP_067190900.1\|2637413_2638979_+\|ribonuclease-Y	unknown	unknown	gnl\|CDD\|237177
NZ_CP014773.1\|WP_067190891.1\|2633557_2633785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190872.1\|2615203_2615731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190876.1\|2619756_2620446_+\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP014773.1\|WP_067190898.1\|2636807_2637101_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|377476
NZ_CP014773.1\|WP_157532111.1\|2614650_2615151_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067190877.1\|2620457_2621201_+\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP014773.1\|WP_082800285.1\|2616005_2618408_+\|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	unknown	unknown	gnl\|CDD\|274627
NZ_CP014773.1\|WP_067190901.1\|2639759_2641514_-\|lysophospholipid-acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153248
NZ_CP014773.1\|WP_067190884.1\|2623677_2624415_+\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_CP014773.1\|WP_067190895.1\|2636495_2636786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067197194.1\|2639085_2639571_+\|DUF962-domain-containing-protein	unknown	unknown	gnl\|CDD\|226914
NZ_CP014773.1\|WP_067190889.1\|2632744_2633443_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NZ_CP014773.1\|WP_067190893.1\|2633975_2636375_+\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP014773.1\|WP_067190882.1\|2623129_2623384_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP014773.1\|WP_067190903.1\|2641575_2642427_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965
NZ_CP014773.1\|WP_067190887.1\|2631078_2632296_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_CP014773.1\|WP_067190880.1\|2621939_2622905_-\|S1/P1-Nuclease	unknown	unknown	gnl\|CDD\|211380

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067190879.1\|2621255_2621912_+\|DedA-family-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.52014e-85
NZ_CP014773.1\|WP_067190874.1\|2618445_2619570_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	4.02267e-128
NZ_CP014773.1\|WP_067190876.1\|2619756_2620446_+\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	9.38241e-15
NZ_CP014773.1\|WP_067190898.1\|2636807_2637101_+\|cell-division-protein-ZapA	gnl\|CDD\|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	6.52257e-19
NZ_CP014773.1\|WP_067190877.1\|2620457_2621201_+\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	1.13097e-15
NZ_CP014773.1\|WP_082800285.1\|2616005_2618408_+\|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	gnl\|CDD\|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	0
NZ_CP014773.1\|WP_067190901.1\|2639759_2641514_-\|lysophospholipid-acyltransferase-family-protein	gnl\|CDD\|153248	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.	3.41385e-74
NZ_CP014773.1\|WP_067190884.1\|2623677_2624415_+\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	1.09118e-26
NZ_CP014773.1\|WP_067190900.1\|2637413_2638979_+\|ribonuclease-Y	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NZ_CP014773.1\|WP_067197194.1\|2639085_2639571_+\|DUF962-domain-containing-protein	gnl\|CDD\|226914	COG4539, COG4539, Predicted membrane protein [Function unknown].	6.88219e-06
NZ_CP014773.1\|WP_067190889.1\|2632744_2633443_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	9.78083e-81
NZ_CP014773.1\|WP_067190880.1\|2621939_2622905_-\|S1/P1-Nuclease	gnl\|CDD\|211380	cd10981, ZnPC_S1P1, Zinc dependent phospholipase C/S1-P1 nuclease. This model describes both the bacterial and archeal zinc-dependent phospholipase C, a domain found in the alpha toxin of Clostridium perfringens, as well as S1/P1 nucleases, which predominantly act on single-stranded DNA and RNA.	4.63441e-68
NZ_CP014773.1\|WP_067190882.1\|2623129_2623384_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.05206e-18
NZ_CP014773.1\|WP_067190903.1\|2641575_2642427_+\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	6.76164e-14
NZ_CP014773.1\|WP_067190887.1\|2631078_2632296_-\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	1.20786e-19
NZ_CP014773.1\|WP_067190893.1\|2633975_2636375_+\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0

>NZ_CP014773.1|WP_067190884.1|2623677_2624415_+|FkbM-family-methyltransferase
MSILKKLLPNNLKQEGKYLLLNLLKMPFNRAGVPVDITEWVPNRHPINFIDIGASKGNFSHALNTYYQVNKAVLIDPIPHNAAALQHRFTTGNFTVINAAVSDKASEADFYITEEFDVLSSLFPMKDEHLKPFNIPHPQKTTVKTDTLDKIFNGLKLDKIDLIKIDLQGAEHLVLSNAARTLKATRAVYTEFSYKPMYDGSSTFFDVFEMLTKANFRMVNTSTAYKLNNGEIVQGDALFINNNEL
>NZ_CP014773.1|WP_067190882.1|2623129_2623384_+|30S-ribosomal-protein-S20
MANHKSSLKRIRSNAAKRLRNRYQAKTTRNAIKKLRGTTTKVDATPLLSKVISMLDRLAKKNVIHKNKASNNKSKLTKFVNALS
>NZ_CP014773.1|WP_067190880.1|2621939_2622905_-|S1/P1-Nuclease
MKRVLLSCLTGSLIIVLCSSWGFFAHYRIHRAAVFTLPKEMAGFYRANIEFITEHAISADKKRYVDSLEAPHHFFDADHYGKQPFKVMPQHWIDAAAKYSSDTLNKYGTVPWIINANYYWLVNAFKRHDTTAILTLSANLGHYLSDAHVPLHLSANYDGQLTNQTGLHGLWESRLPELFSNRYNFYVGKARYIPNPLAEAFAICRASYKSVDTVLRFERILNKRFTDSTKYAMEQRGNRMVKVYSVAYSRAYHHMLAGMVQRKMRQSVLSVGSFWFSAWVDAGQPDLNKMIAKPLSAEQIRQINEEAALYRKGKVLILEKN
>NZ_CP014773.1|WP_067190879.1|2621255_2621912_+|DedA-family-protein
MELLHSLIDFILHIDKHLAEITSQYQSWTYLILFFIIFAETGFVVTPFLPGDSLLFAAGALIAGGASGLDVHLLALILVVAAVAGNSVNYMLGNFLGAKVFKEENKILKLSYYIKTKEFFDKHGGKAVIFSRFMPIIRTIAPFVAGVGRMPFGRYSLYNVIGGVSWIILFLYGGYLFGNVPFFKKNFSLVAIGIVLISILPPIIAFIRSKMSKPEAAK
>NZ_CP014773.1|WP_067190877.1|2620457_2621201_+|DUF4397-domain-containing-protein
MASNNKSVILKYLCLFICGVLVVPQLVSCGKDSTTTSLGSNNGYLNIVNLSPNINPVNLYASFIKQGTTIYRYPTPSDYFLMNIIDTPLQIRPALTTTSSQSNLITLPRQLNKNIRYTWYLTGLRSDSAFSYIFTVDSGAIPAPGRSKIRMVNASPGTTGLNLTANDSLAFSKVSYKGVTDYKEVTAGTYNFKFTNGAATSTILTTLKNVTVLDGKLYTLYTYGLLNRTDTAAFNAGIILNTIPDKK
>NZ_CP014773.1|WP_067190876.1|2619756_2620446_+|DUF4397-domain-containing-protein
MRFEKIKGYYIGCLLLLMAVAVYSCKKNYDVPSTSSTLTTKLNVISATTDTLNFYLNGSRVNSISSIYPFGNTGYLDVKYGDQTYQFKPYRSSAVLFDLPLSLDTGQVYSLFIAGRQAKDTFMSLDTLTSDTANRAMLRFVNASPDSVNLDVSIGDTLKFTVRPYKSISAFIPVGSGLKHIKVLKAGTTTAISDTTRTLLANTVYTLFAKGTLAGTGGGKFGTGMLVNK
>NZ_CP014773.1|WP_067190874.1|2618445_2619570_+|DNA-polymerase-III-subunit-beta
MRFIVSTSTLLKQLQSVSGALSNSTVLPILENFLFEIKDGNLTISATDLQTSMTTSLPVEAKENGRIAIPSRILLDTLKSLPEQPVAFSVDDKTFAIEISAGDGKYKLSGENGEDFPKIPVVENASSVNLPASVLGEAINKTIFAVSNDELRPAMTGVYCQLSSQHLTFVATDAHKLVRYRRKDAKADSTTSFILPKKALTLLKSALPDSDVNVSVEYNSTSAFFKFNNINLVCRLIDERYPDYEAVIPKENPNKLAIDRLAFLGSLSRVAIYANKTTHQVRLKINGSELNISSEDIDFANEAHERLSCQYEGDDLEIGFNARFLIEMLKNLTCEEVSLEMSTPNRAGLLLPQGGDENEDVLMLVMPVMLNSYA
>NZ_CP014773.1|WP_082800285.1|2616005_2618408_+|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG
MFPILKKEITTYLSSLVAYVTISVFLLVLGLFLWVFPDTSILAYGYAGLDSLFSTAPYLFMFLVPAITMRSLAEERREGTFELLLTRPLTDLQIVLGKYFAGVLVVLFALVPTLVYYFSVYTLGTPQGNIDTGAVIGSYIGLFLLGSAFTAIGLFASSVSKNQVIAFTIAVFLCFFFYSGFDSLSGLLSLQNLSLQSLGITEHYNSVSRGVLDTRDLVYFILLDTLFIWLTLFVLQRQQQKKFINTEFLSAIGLMIALQIFSTWAFTRFDFTREKRFTISPVSRNILDSLSGPVTVSVYLQGDNFPGGIKRLQTGVKDMLSDLQAYSNRKLTFIFVDPLKGQSQEQQKQTFENLASQGVEAQNLSVKTEDGVQQKVMFPFALVNSGDKSIPVKLLETQSNLNSSYEEQLNNSIQNLEYAFTSAIKKVSRGGRERIGFTEGHQELDDVQLNDGMRSLSDGYLVGRVNLTTIPFDSLRKLGLLVIAKPNKAFTELEKFKIDQYLMRGGRVLWAIDQVSAELDSLRGHGGEQLAFNKELNLDDQLFSYGVRINYDLIADMNCAEIPVTTGNLGGQAQIQLLRWLFYPIYIPLSKHPIVKNLDGISSQFASTIDLLDVKNIRKTVLLNTSPYNKKIRVPYMMSLQALQQEPKREEFDNPQRITGVLLEGKFKSDFRNRPIPDGLNEKVEIIPESKATKMVVLSDGDILRNQVGADGSPYPLGYDRYTHQTFGNKNLLLNIADYMADDSGLISLRNKEIQLRLLDKARVRSEKLTWQIINNVVPIAIVLIFAIFQHYIRKRKYAH
>NZ_CP014773.1|WP_067190872.1|2615203_2615731_+|hypothetical-protein
MKRLIFILFAFVTVYAHGQDSNVITQPNNKAISIGAEGMITRKNAFFPYGVGVSLKGEYPLGEGLSLTATGAYNRFFIKDAYKNPTGSTPLASFIPVKVGAKYFIGGGIYTEGELGAAIETNYEKKKYFNLTVGIGYTLQVTTHNSLDFSFRYEDWGDQTIRFGALRVAYRAEWL
>NZ_CP014773.1|WP_157532111.1|2614650_2615151_+|hypothetical-protein
MKLFLLLIFIACCGYAHGQTSGKGFGVGLDLGIPSNSIYNIGFGGSGKAEVPLISSLSLSVTAGYTNFYYKGGLIGNNKTQDAAGFVPLKAGVKYYAGEGFYIEGETGVALATNYTKNTLFAFSLGPGFFIATGKQTGVDVGLRYENWGSGRLQQTAIRAAYRFNW
>NZ_CP014773.1|WP_067190887.1|2631078_2632296_-|IS4-family-transposase
MGKSTFFTGQPVLNQLLSLLDRNGIRSLARRGEHDRYYRYFDTYTHLVTMLYCAFNKCTSSREVVSGMKACLHKLSHTGVIKCPARSTLCDANAGRSFEVFARIYDQLYRRHKHLLPDSRLRIDPKLFIADASTITLFQRILNAPSPGKLDGRRKGGIKVHTLINAADDVPLKVNFTAASANDMPFLKEIHLQPGSFIVFDKGYVSYAQYERFCNEGVFFVTRQKKDARYTVTTVHELSEHSKDVGVVADRSLLQGTRTQKEGIKLKVRVVTFFDKESGRTFEFLTNNFSLPPEVVADIYKKRWLIEVLFKRVKQNFPLKYFLGDNENAIKIQIWCAFIADLLIKLVQVQLKRKWAFSNLTSIIRLHLMSYIHLFDFLNNPERLSAVYDHAEQLKLGGLEIGFKT
>NZ_CP014773.1|WP_067190889.1|2632744_2633443_+|DNA-repair-protein-RadC
MEAYSSNLSIKSWAEEDRPREKLSGQGRRALTDAELIAILIGSGSRNETAVELSKRILHHYDNDLNNLGKASIAELSKFKGIGEAKAISIIAALEIGRRRGDTEFKARDTITCSKDIYNIMRRHLMDLSHEEFWIILVSRASKVIAKELISKGGLNGTVADPRVIYYSAIQHQASSIVLLHNHPSGNLRPSKEDIFLTKKMADAGRLLDIAVMDHLIISDAGYFSFKDEEIL
>NZ_CP014773.1|WP_067190891.1|2633557_2633785_+|hypothetical-protein
MIEPEDDQLEQDDQLSQTENDDQMSQQDIHSNGFDETNEPIGETDETQQAQRAYDAAEPSYTLNLDEDGDNSDED
>NZ_CP014773.1|WP_067190893.1|2633975_2636375_+|phenylalanine--tRNA-ligase-subunit-beta
MKISYNWLKEFIDTDKTPEEISTILTGTGLEVESLDKVQAIPGGLEGLLIGYVVECVSHPNSDHLHITKTDVGGVEPLQIVCGAHNVAAGQKVVVATVGTTIYPTVGEPFKISKSKIRGEASEGMICAEDEIGLGTDHAGIMVLDADAKVGTAAKDYFKLNDDYLYEIGLTPNRADAVSHLGTARDVAAFLKIGITKPDVSAFKVDNNNKAFEVIVENEQAAPRYAGLTITGIKVIESPQWLKERLAVIGVRSINNVVDVTNYVLHELGQPLHAFDAAAIAGNKVIVKTVAEGTVFKTLDDADRKLSADDLMICNAEEPMCIAGVFGGAKSGVNEANTSIFLESAYFNAVSVRKTAKRHGLKTDASFRFERGTDPDMPVFALKRAALLIQQVAGGVISSEIFDHYPNPVAPFEISVSYKNIDRLIGKAIGHEEIKSILKGLDITIVTETEEGLSLKVAPYRVDVTREVDIVEEILRIYGYNNIEIPTQIRASLNNSIRPERDTVQNAIADLLSANGFNEIMNNSLTKSTYSDDLEHAVKILNPLSSDLDVMRQSMLYSGLETVNYNSNRKAADLKLYEFGKIYSFVEEKYVESQRFSIFITGAFKAEQWNGKAVATSFYSLKAVVDGILKKLNITDYTTADHTAAGLAYGLQYLRGNKVLVTFGSVAATALKKADVDKEVFYADFDFDAILKLVRKNVIVYQEVSKFPAVRRDLSMLVDKSVTFRQLKQIAAKTDKKLLKEVNVFDVYVGDKLPAGKKSYALSFILQDTEKTLTDKAIDATMQKLIYNLDKEAGAEIRK
>NZ_CP014773.1|WP_067190895.1|2636495_2636786_+|hypothetical-protein
MPSVAEQLTKVVYKTERLIELCTALQEENDLLKLESEALNVALKASTSKTKDLEEKLRVLKVAKSFSETNEKSVDIKQKINDFVQEIDKCIVLLKK
>NZ_CP014773.1|WP_067190898.1|2636807_2637101_+|cell-division-protein-ZapA
MGEISIKINIADRVYPLKVNMEEEEIIRRAAKLINDRIKEYQENYAVRDKQDLLSMCVLHYATSSLKADKKVTTDDSEVTEKVYQLDHLLTEFFSKQ
>NZ_CP014773.1|WP_067190900.1|2637413_2638979_+|ribonuclease-Y
MNSYLYLIIGLLVGVPTGIVIGRFLLRKLFKDQEVNAQNKVKKILKDAENNAEILKKNRQLEAKEKFLQLKAEHEQEVNAKNNTLNQRENGIKQKEQSFNQKLENLNRKESELDNSRKKLDAQTETLVKKQEEVEHIKNQHVVELENIAGLSAEEAKNQLIDNLREEARSKAMAQIKDIVDEAKLTASKEAKKIVIQTIQRTATESAIENTVSIFNIENDEIKGRIIGREGRNIRALEAATGIEIIVDDTPEAIILSGFDPVRREIARLAMHRLVTDGRIHPARIEEVVAKTRKQIEEEIVEIGERTVIDLGINGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFCATMAAELGLNVKLAKRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPEVCNAIGAHHDEVEMTSMLSPIIQVCDAISGARPGARREVVESYIKRLKDLEELALSYPGVEKTFAIQAGRELRVVVESEKISDAQSEILAADISNRIQTEMTYPGQIKVTVIRETRSVAFAK
>NZ_CP014773.1|WP_067197194.1|2639085_2639571_+|DUF962-domain-containing-protein
MRPVDVFFSRLDASHKNATNRLLHYICVPLMLFALLAITWAIPFPYLKFIGSYNGMFNWASFLIAFCVYYTLKLSPILSYTMLILLFGLSYGVSLLAAWELAGGIPLIWMGTLLLAIAWLGQYLGSKQEGNPASFKDDTQLVLITPIWVLYSLFKRLGWRY
>NZ_CP014773.1|WP_067190901.1|2639759_2641514_-|lysophospholipid-acyltransferase-family-protein
MKIITTEEFAKATKLDKLKMPGLASFLMELMKINQVNDLFAQAQPKQGPDFVDAILKGCGIEIDFDEKELKNIPKDGAFIAIANHPYGGIEGMVLLKILCMVRPDAKLMANFLLKKIPNLSDYFIAVNPFENVEHSSSISGLKNTLELLHSGTPIGIFPAGEVSTFKMEKQEITDRLWHPVVGKIIAKAKVPVVPIYFHGNNGLLFNLLSLIHPALRTAKLPSELFNKQGRTIKLRIGKPIKVADIPDNNNATKVLNFLRAKTYALGAGLEEEKKIFSPRNLFRVKKLPEAIVPETMADKLEAEIAPLRDHYKIWTEKNYEVFIAPTSAIPCTIREIGRLREVTFREVGEGTNKATDLDEYDIYYHHLFIWDVDAKMIVGAYRIGLGDEIFYSVGKKGFYINELFKLKEQFTPVLKKSLELGRSWIRKEYQQKPLPLFLLWKGILKYLIDNPRYRYLIGPVSISNSFSKFSKSLIVDYINRNHFDHDLAQYVKPRKKFKVDFDNIDTDLLMSGGDSFKGLDNLISEVETHNMKVPVLLRQYIQLNAKIISFNIDPKFADCLDGFLVLDLEKVPQDILEKLGKNL
>NZ_CP014773.1|WP_067190903.1|2641575_2642427_+|hypothetical-protein
MKAQIKNYMSLTKKEWNGMLVLVILIVAILAAPYAYQWYHKDSTINIKEFNEAVLQLKKANPGSFSAGNNSAAHNLSKPLYFKFDPNNLPADRWKMLGLTDKQITTIQHYHAKGGRFYKAADFKKIYGIADSNYKALAPYMQISAVEMPIAEVVELNTADSAKLTALNGIGPSFATRIIYYRERLGGFVNKEQLKEVFGFDELKYNELKGLVKVDPRRIKKIAINTITFDQLRLMPYLNYKQVNAIIEYRKQHGNYSAMADLKNIAIVDEGILRKIEPYISYK

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Crispr_ID: NZ_CP014773_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014773_8

5202339-5202452

Orphan

Consensus_repeat	Method
CGCTGCCCGACCCTCTCTGCTACGCAAAGAGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014773_8

>merge|NZ_CP014773|8|5202339-5202452|CRISPRCasFinder
CGCTGCCCGACCCTCTCTGCTACGCAAAGAGGGTGAAGAAATTGTTCGCTCGAAGTTGGACTCACCCCGGGTTCGCTAGCGCTGCCCGACCCTCTCTGCTACGCAAAGAGGGTG

>NZ_CP014773|8|6|5202339-5202452|CRISPRCasFinder
CGCTGCCCGACCCTCTCTGCTACGCAAAGAGGGTG	AAGAAATTGTTCGCTCGAAGTTGGACTCACCCCGGGTTCGCTAG
CGCTGCCCGACCCTCTCTGCTACGCAAAGAGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014773.1\|WP_067196002.1\|5211277_5211466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067195993.1\|5198383_5200537_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP014773.1\|WP_067196000.1\|5202583_5210665_-\|T9SS-type-B-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|271323
NZ_CP014773.1\|WP_067195998.1\|5201699_5202281_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP014773.1\|WP_067197623.1\|5195089_5195890_+\|NIPSNAP-family-containing-protein	unknown	unknown	gnl\|CDD\|311781
NZ_CP014773.1\|WP_067196015.1\|5218913_5219525_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067195991.1\|5197401_5198382_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NZ_CP014773.1\|WP_067196006.1\|5212245_5213016_-\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|378343
NZ_CP014773.1\|WP_067195981.1\|5189380_5190880_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_CP014773.1\|WP_067195987.1\|5196314_5196575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067195995.1\|5200558_5201698_+\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|379212
NZ_CP014773.1\|WP_067195989.1\|5196763_5197405_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP014773.1\|WP_067197627.1\|5213783_5214281_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014773.1\|WP_067195985.1\|5193538_5194729_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP014773.1\|WP_067196008.1\|5213008_5213410_-\|DUF2809-domain-containing-protein	unknown	unknown	gnl\|CDD\|378530
NZ_CP014773.1\|WP_067196011.1\|5216047_5218561_-\|XrtN-system-VIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|275270
NZ_CP014773.1\|WP_067196013.1\|5218614_5218917_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|316153
NZ_CP014773.1\|WP_067196010.1\|5214598_5215936_-\|exosortase-N	unknown	unknown	gnl\|CDD\|275269
NZ_CP014773.1\|WP_157532260.1\|5211745_5212078_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349902
NZ_CP014773.1\|WP_067195983.1\|5190982_5193535_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227116

Protein	Function_ID	Function_description	E-value
NZ_CP014773.1\|WP_067195993.1\|5198383_5200537_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	1.41524e-179
NZ_CP014773.1\|WP_067196000.1\|5202583_5210665_-\|T9SS-type-B-sorting-domain-containing-protein	gnl\|CDD\|271323	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.05847e-101
NZ_CP014773.1\|WP_067195998.1\|5201699_5202281_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.10916e-67
NZ_CP014773.1\|WP_067197623.1\|5195089_5195890_+\|NIPSNAP-family-containing-protein	gnl\|CDD\|311781	pfam07978, NIPSNAP, NIPSNAP. Members of this family include many hypothetical proteins. It also includes members of the NIPSNAP family which have putative roles in vesicular transport. This domain is often found in duplicate.	2.50276e-09
NZ_CP014773.1\|WP_067195991.1\|5197401_5198382_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	7.65479e-79
NZ_CP014773.1\|WP_067196011.1\|5216047_5218561_-\|XrtN-system-VIT-domain-containing-protein	gnl\|CDD\|275270	TIGR04477, sorted_by_XrtN, XrtN system VIT domain protein. Members of this subfamily average about 850 amino acids in length, ending with a variant form of PEP-CTERM sorting signal. Members have a VIT (vault protein inter-alpha-trypsin inhibitor heavy chain) domain (pfam08487). Other bacterial subfamilies of VIT domain proteins have members with either GlyGly-CTERM or LPXTG C-terminal sorting signals. Members of this subfamily occur only in context next to a protein sorting/processing enzyme, exosortase N (XrtN). These subsystems occur both among the Bacteriodetes and in the spirochete genus Leptospira.	0
NZ_CP014773.1\|WP_157532260.1\|5211745_5212078_-\|hypothetical-protein	gnl\|CDD\|349902	cd05651, M20_ArgE_DapE-like, M20 peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases. Peptidase M20 family, uncharacterized protein subfamily with similarity to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) subfamily. ArgE/DapE enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this subfamily are bacterial, and have been inferred by homology as being related to both ArgE and DapE.	4.4191e-12
NZ_CP014773.1\|WP_067196006.1\|5212245_5213016_-\|DUF2236-domain-containing-protein	gnl\|CDD\|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	1.95777e-05
NZ_CP014773.1\|WP_067195995.1\|5200558_5201698_+\|XdhC-family-protein	gnl\|CDD\|379212	pfam13478, XdhC_C, XdhC Rossmann domain. This entry is the rossmann domain found in the Xanthine dehydrogenase accessory protein.	5.90286e-49
NZ_CP014773.1\|WP_067195989.1\|5196763_5197405_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	7.581e-84
NZ_CP014773.1\|WP_067195981.1\|5189380_5190880_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	2.21894e-49
NZ_CP014773.1\|WP_067196008.1\|5213008_5213410_-\|DUF2809-domain-containing-protein	gnl\|CDD\|378530	pfam10990, DUF2809, Protein of unknown function (DUF2809). Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.	1.1592e-22
NZ_CP014773.1\|WP_067195985.1\|5193538_5194729_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.00575e-36
NZ_CP014773.1\|WP_067196013.1\|5218614_5218917_-\|transcriptional-regulator	gnl\|CDD\|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	7.18795e-28
NZ_CP014773.1\|WP_067196010.1\|5214598_5215936_-\|exosortase-N	gnl\|CDD\|275269	TIGR04476, transmembrane_exosortase, exosortase N. Members of this family are exosortase N (xrtN), a bacterial exosortase variant whose single target, encoded always by an adjacent gene, belongs to the vault protein inter-alpha-trypsin family. This system occurs in a number of spirochete (Leptospira) and Bacteriodetes species.	7.01941e-108
NZ_CP014773.1\|WP_067195983.1\|5190982_5193535_+\|hypothetical-protein	gnl\|CDD\|227116	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane].	1.06367e-08

>NZ_CP014773.1|WP_067195998.1|5201699_5202281_+|nucleotidyltransferase-family-protein
MAGLIILAAGASRRLGKPKQNLIYKGETLLQRAVNTAIASECSPVVLVLGANADAIESTLVPGKFTIVINPDWQSGMASSVKLGINEIAKDKTIDAAVIMLCDQPFVTPELINSLLHYRGTTGKTIIGSAYKNTVGVPALFDRSVFNKLEELQGDEGARLLLKNQAQDVFAVKFDEGIIDIDTAEDYSQLDTD
>NZ_CP014773.1|WP_067195995.1|5200558_5201698_+|XdhC-family-protein
MKEIIDIVAAYDKAAKQGKETALATVVLVEGSAYRRAGARMLITEDGQLTGAISGGCLEGDALRKARLVILQQEPMLVTYDTMDDDDAKLGVGLGCNGIIHILIEPISEDANNPIAFLKAVISNRKNAVLVTLFSLANRKAAQPGTCLCLTGEVLLENRMEHYSHRDNLMDDTKAVYTSGRSENKTYPGDIAYTAFIELVKPQIALVIIGAGNDAMPLAQLAGVLGWDVTVIDGRPNYALPERFPSAQKVIVARPEQALAHLFIDTNTAFVLMTHNFLYEMALLKDLLPLNPSYLGILGPKKKLLRMLDELADQGVTVSDEQMTRIFGPVGLDIGSEGAEEIALSVMAEIKAVLSARKGYSLKYKPVPIHAPQPIAVNN
>NZ_CP014773.1|WP_067195993.1|5198383_5200537_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MEQELITAIPSSADGMSRVDGRAKVTGAAKYSAEYKLPGMTYAVLVGSTITKGSIASIDTVAAQKAPGVLAVVTYLNSPKVPGFQTTKPKKPNAKIGSLKVFIDNQVLFNGHPIAMVVADTFERAQYGASLVKATYNKVAHDTKPPAGMDRGEQPKAVGKDYVRGTADAWQTAPVKLEQEYIIPTEVHNPMELHAIIARWDAADKLTVWDKTQGVKATSGDIAKAFGLKPENVQVNSQFVGGAFGSALQVWPHEIAAILGAMVVKRPVKLVLSRPDMFTSVGYRPHTWQKIGIGATKDGTLVGITHEAAGQTSTYEDFSEEPINSTKELYACANVNTSYKLVSVDVNTPTWMRGPGHATGAFALESALDELSYALRMDPIELRLKNYAKTDPDSKKEFSSKYLDEAYAMGAKQIGWAERKAEAGSEMQNGWRVGYGMGGGMFGAYRDTAVVRAVFKGDGTLTLQTAVSDIGPGTGTAAVAIAAEQMNIAPEKIKFEMGDSSLPYAPMQGGSSITSTVGSAVFDACTVLKEKFQQLLGAGGTDKPDYVKILKDKNLPSLEVLTKSQGGPNNQKYSMQSWSVHFVKVLVHPTTGVVKVDKVVCVADSGKIISPKTARSQVVGGAIGGIGMALMEEGVIDHRYGRYVNNNFADYHIAVSADIPQIEAMFVNKPDPYINPIGAKGMGEIALIGMAAAVANAVYNATGKRVRNLPITPDKLI
>NZ_CP014773.1|WP_067195991.1|5197401_5198382_+|xanthine-dehydrogenase-family-protein-subunit-M
MKQFQFLQPGTQSAVLDAIVKPGVKIIAGGTNLVDLMKRGVTAPDKLVDINRLPLKSINTIVNGLHIGTLALNSEVADNTLVTTKHPLLSMALKAGASPQLRNMATLGGNMMQRTRCAYFYDTAMPCNKRQPGTGCGAMGGYNRMHAIFGTSPQCIAVHPSDMCVALAALDAVVIIKGKAGERRMPFTSFHRLPDANPEKDNQLAPGEMIIGVDIPDNNFAKNSYYLKVRDRQSYAFALISVAAALELENGVIKKARLAMGGVAHKPWRLFDAEKALVGKAPTEENFAAAAKIAMQGAKGREHNAFKLKLAPATITEALKHAGGLV
>NZ_CP014773.1|WP_067195989.1|5196763_5197405_+|(2Fe-2S)-binding-protein
MSEKKPETVAESECLSNGTRRDFIKQTSIITAAALTPATVVQAATGHMDEQLAAVFEKMPLKMEVNGVQQNLSVEPRSTLLDILREQLDLTGTKKGCDHGQCGACTVHVDGQRVNACLTLGLMVNGKKVTTIEGLAKGEELHPMQEAFLKHDGFQCGYCTPGQIMSAVACIREGHANSEGEIREYMSGNLCRCGAYPNIVNAIQEVKQGGLTV
>NZ_CP014773.1|WP_067195987.1|5196314_5196575_+|hypothetical-protein
MQEPFDVLVGGVVYSVFPEEDNVYTIFKAGTEFGKIEKDTENLWLKLDPDTETPMFDNDEETNRIGQAITAYVPEEDDEDEDDDLE
>NZ_CP014773.1|WP_067197623.1|5195089_5195890_+|NIPSNAP-family-containing-protein
MKRRSFVKTTLISGAAASIIPSVTKATDATELAGRGTDFYELRTYTLKNETQQKLVEDYLEHAAIPAMNRNGVTKVGVFTELKPEGQTKIYVLTVFTSLDQMELVAEKTEKDEAFKTKAAAYLNAPASAPAYERIESSLMKAFKHSPNLAVPEKAPRIFELRQYQSASEAAGKKKIEMFNDQGEIDIFKRLGFKPVFWGETIIGPLRPNLTYMVTFDDLDAKNAHWKAFGGDPQWKKISTVPEYADALLVNKITSTLLVPTAYSQI
>NZ_CP014773.1|WP_067195985.1|5193538_5194729_-|glycosyltransferase-family-4-protein
MKILILNNDFRVYWKGRLVFLREYLAGYNISLYAVELFGTGSPYAFDSYDNKEEWWTCLFPNQSAEDLSPATIAERLFKVADELNADVIIGPSIVFYAGALGLRWARRHNKRFIMFDDGKTSQIKRNPVVQFVKDLLIGQSDALWLPTPDYDNEYTTYHQKSSIIFYGFDTVNNRLFKNPGKPKLDNKTIICVARLVPVKNLDNLLRAWQVVQNAGTSYELLIIGDGPEQASLAGLRDELGLTTVKFLGAVDNDQIPEWYHRSDAFILASLWESWGLVVNEGMAAGLPMLLSDKVNAAQGLLKERVNGYRFDPLDMQDMADVILRYIRLPLSQKEKMSAASSNIIDDMSYDKMGEQLLYAINLLQTRKIKRPGILARFIMARWNGKYNVGSWDKAQ
>NZ_CP014773.1|WP_067195983.1|5190982_5193535_+|hypothetical-protein
MSYKTLIIVISFIFSTYIAAAQKNAAGDSITIVVNDKFEKAGKIKRILLGTNYRKVWAQPITIPIIHLATKKGGLRITDIGGGNQTTSLQLKDPTGRQWVLRSVNKTTSRDQPAIYKHTIVEDLMLDAGSIGHPYSALCVPPMADALGLQHSNPSIVYVGDDPNLGKYHDEFANQVYLFEERGAPDGSKAIKTEDLQEKLEKNNDKKVDQKLVLRARLFDMVVNDWDRHGGQWRWEKNKIDDDVYEPIPRDRDKVFYNTGGIFFTVGSLIKPNLQPYTDHIRRVDLFNYNTVTFDLYFLNELNQKDWEEQIAYVQNALSNELITRSVKLMPANVYAVSGPGIIKTFKKRRDNMKKIGLSYYRFLAQLVEVPASNKDERFVITSKEDGDVQVVIKKIKKDSTEKTIYKRTFKRKKTTEIRLYGLDGNNTFEVKGSKPLAIKVRMIGGNDTDTYQIDTALKSRGKLYIYDRKDQPNNLPSRSDVHLKLSADTAINRYKHPENKYNTITPSGGLGYSTEDGLQLVAGLNYVKYGFQKEPYASLQQLKVNYTLGRHSFIFNYNGEFKQGIGKTDLLINAVLRGPNNTNNFFGLGNVGEFVNEGQKKFRYYRNRYDYAVADARLAHQYKNWQISGGIIAQYYTANAENNEDHFLSEYNQLHPELNLLSSKLYTGLIAGATLDTRNNKQFASKGLVWKTTLTGLTGINVADHSTASVLSTFTFFAPLKDSTIVFADRIGAGTMVGKGEFYQMMNLGGLSLRGYHTSRFIGNSMLYNNAEVRAKLFDFHNYLLPSAVGVILFDDTGRVWLKGEKSNTVHNTYGGGVFLTPYHAFLFEAVLGKSPEGTLVYFTLGFRY
>NZ_CP014773.1|WP_067195981.1|5189380_5190880_+|DEAD/DEAH-box-helicase
MDYNLYDYQEKDLNTIFNRLETCEPNYRLLYQLPTGGGKTRVFSAIADRFLKTYGKEVVVLTHRLELCGQTSLTLKKLGVNNKVINSTVKCIPRKSGLNCYVAMVETLKNRIRDGLMRTEDVGLVIIDEAHHNSFQKLLSKFTNARIIGVTATPLSSDVNLPMRKYYNELLTGQTISDLISEGYLAKPSNWRYDVELNTLKTGIHGDFTVSTSDELYSSPAMLDLLLHAYEAHSKNKKTLIFNNGIFTSRNVCKLFNDSGYKARHLDNQTPAAERAEILKWFKTTKGAILSSVSILTTGFDEPTVQTIILNRATTSLTLYHQMIGRGSRRLPQKKTFSIIDLGNNTDRFGEWNNPVDWAQVFNHPEAFYEVFSARATQEAHSMPSDSRAKFPNSLEIAFDVQQAYEKALAGGQKAKTVIRDSIKQHVLMCVENAGTVSEALELTDELQKEIAWRIKQYCKCLGKVTKNYRDWLDEDYRSKLKILVEKIMQRRGLQRVAV
>NZ_CP014773.1|WP_067196000.1|5202583_5210665_-|T9SS-type-B-sorting-domain-containing-protein
MKKLLLALIPVLYTAACFAQAPIVSYQSPQNYIVGTTINSLAPAKAGGAVPPAIYGQVATLAGSGVNGSTDGSGSLATFNDPKGLAADSKGNIYVADKANSVIRKITPEGLVSTFVPKSAGLSFPAGLAFDAGDNLYIADIGTNQVKKVTPAGAISIVAGTGDYGFAVGPALLSSFKSPSGIAIDGAGNIYVSDYGNQQIRKIAGGMVSVLAGTGATGYADGDKTVAKFNGPFGVATDAAGNVYVADIYNNAIRKVTPTGVVSTLAGNGTAGAANGTGTAARFEGPYGVANDANGNLYVSDSYNSLVRKITPAGVVTTLAGNAGNFGTVNAVGTDALFSFPVGIVADKDGNLYTADNGSSTIRKILLTGYNISPALPPGLSFDATTGIINGTPTAVSPAQDYTITAYNKSGSGSAIVNITTRLISTDATLSGLLTGGVSLSPSFSPSQRNYVMTVPETTTGINVTPSLADINATLKINGSPVASGAPFTMPLNTGGNSTAIQVIAEDGVTISTYTVSFIRPRKAVNPPNISYSSPQQYTVNVAIPPLSPQNTGGAVPARAYGGVTTVKSGLEDVSAIAVDPSGNIYVTNVVSNIIQKVSPGGNLSTFASGFSTPYGLAADAFGNIYVGDSGFNMIKKVSAAGEVSIVSGKSGDYNFANGDADLDAKYRYPVGVATDGSGNLYVADLANADIRKISITGRVTTLAGTNAAGSANNTNGSNASFNEPYAVATDLNGNVYVADSKNNKIRKITPSGATTTFAGSGAAGQTNGTGTLAAFESPKGVATDVLGNVYVLDAANSMIRKITPSGVTTRLAGSGYYLFTDGIGPLAAFSYPLGIAADADGQLYISDSNNKAIRKIQTTGYVISPATLPAGLTFDATTGKISGTPTASAGPANFTITAYNLGGSSSAIVNIRVNGLNNDATLKSLDLSSGTLSTAFSSGTLSYSTNNTGNADFITLTPTSTQGSASIKINGATVVSGTASANLPLAIGANVFDIVVTATDGISTKTYQLTVNRSAPVYATEASLSSLTTTNATFFPAFNSNTLNYSASVAGTVAGLTVTPSSLESHAVIEVEGTPLVSGTESGTIALNYGSNTIHIKVTAEDGVTVKTYALTVIRQASANADLSGITLSTGHLTPNFSANGLTYSAEVPGNVDAITLTPYTAEATATVRVEGTIVASGAASGTFPLAVGPNVITAAVTAQDNVTVKNYQITVVRAPSSNANLSALTPSSGTLSPTFDPAKTSYGTSVPNTVTSINITPVSGGVNEIITVDGVVVASGTASTAIPLIVGNNPITVQVTAEDGITIKNYLLTVSRLPSSDAGLAGLATNQGDLLPTFATGIASYSIAVSNATTAIKIIPTVNEPNATVTVNNVSVGNGSASGNISLNIGVTNIMIKVTAQDGVSTQTYSVSVTRAASSNADLANLEINPGSLTEVFDPGITAYSAKVGNTTTAVKLTPALSEANASVAINGVPVASGVPSGNIALNVGPNIINVKVTAQDGITVKNYTVTVTREPSSNADLSNIALSTGSLKEVFASGKLDYSADVLNTDASIQIKATVSDATATITVNGDAVAAGSFSGNIPLTVGQTVITIVATAQDGITTKTYTVTVKRPPSADANLAALVPGAGKLDPLFTQGTTAYTVTVPNTVTAITLSPTVNEANASVKVNGTIVASGTASNSFPLIVGASVFTTVVTAQDGVTTKTYTVTVIRQKSTDATLSNITLTDGSTLTPNFLPGITTYTASVLNTVTTASVIPVANESNAIITIGGRVVNSGAASAPVTLVVGPNTINTIVTAQDGVTTQTYSITVIRMPSTDATLSDLKLSSKTLTPAISSGSLLYNASVGNEVKTITFTPIVNQADATVKINGVSVTSGSPSAAIPLKVGDNTITTVVTAQDGITTKSYIATINRAPSTNATLAQLAVVPNQLNITFNKLITGYSMLLKNDVTSAIVTPTVEDATATVVINGIPVASGSPSPAIPLKVGNNPITIIVTAEDGKTKKTYVIIANRALSSDNDLANLVLSSGTLKPGFESGLNNYTAAVAHAVNSVNVKPYLADAAASVKVNGVAVSSGSASPEIRLNVGPNMINVVVTAQNSEVNTYTITVNRDPGSNANLLNLSLSAGTLSPAFTIGKTSYAATVLNAVGSVKITPTVEDATATVKVNGTAVASGSASQSIVLTVGSNTILTTVTAQDGITTQTYSVTITRAKSPNADLGTLTLSSGSLSPVFSAAGTSYSVTVNNSEQTIRVTPTAVDAAAVVRVNNAIVAAGGSSGNIPLAVGITPVNITVTAEDGTLKTYTVNVTRSKSPDASLADLTSASGVLDPAFSPAVLAYQITVDNSIATATLKPTANDAGATIQVNGQAVVSGNVSQALTLKQGANPFNVKVTAADGTIQTYVVNIFRTLSDNADLANLVLSAGNFTPAFTSGNLNYELHVPYNVFKTTVTATASDPGAGLKINGSAAQNGIASGSVTINSASTLVTVTVTSASGAQSKSYQVKVIRAAPPVSTDATLISLRTSSGQLSPSFSPTTTNYVVTVDANTQSVTVTGITTNGGATIKINGTEVLSGSSSDEIILAPGTNPVIPIVVTAADGVTTQTYTVAISKAVLAAILPSVVTPNGDGVNDYWVIPNINLFPDCTVKIFNRGGQMIFSSVGYGTPWDGTLNGRTLQADVYYYVIDLKHSQGVRSGAVTIMK
>NZ_CP014773.1|WP_067196002.1|5211277_5211466_-|hypothetical-protein
MLIEFLGVILLLALIVLPLFPRRTKTKTRSALTVNTDTHDADYAINANGKLERIHGTSLIND
>NZ_CP014773.1|WP_157532260.1|5211745_5212078_-|hypothetical-protein
MNIVPGSTIPKWNIACSKWGGAISAICSFQKTIANRFKTTLADGWHNGHSIGDPLLSSVKIGPGDPARSHMANEFVYVNEVSEGVSRYIKLLKSMMYCVLHNPEADFLTK
>NZ_CP014773.1|WP_067196006.1|5212245_5213016_-|DUF2236-domain-containing-protein
MDKDIVKYFVPEGSIVREIWSKADNILFIFAGSAAEFALNKAVDWLYYTGQLPADPLGRLFSTVQYSRMIIFSEYNSALAAIDRINAIHQGVEQARGATIPDWAYRDVLFMLIDYTIRSFELLERHLSDDEKEEVFEVFYRLGLRMSLKDMPYNYQQWLKVRVEHLQTHLLCSDFTIDLFKQYKKHLGVLRYELLKQVQLLMVPKAAKSLLPINSILYIGPLIGLYKLSRIVKLHGLLKEAFLPPEYKSQIKEMDV
>NZ_CP014773.1|WP_067196008.1|5213008_5213410_-|DUF2809-domain-containing-protein
MFKFNKYYFGIAVLLFNAEVLIADFMHDTIIRPYGGDFIVVILVYCMVKAFIKTGVWKTAIGTLIFAYLVEITQFFHLIDQLGWGHSALARNLLGTTFRWLDMLAYTLGIILVGLLESWLSVLKRVELRKVNG
>NZ_CP014773.1|WP_067197627.1|5213783_5214281_-|hypothetical-protein
MRTVNHKKLSRRIKICIWVMIAGLFLSGATAFPIETELHWLVNHRSALPAYIQAWLATVYHAVKASNQAYPFLSYGTDWLAFAHIMLAILFVGPLRDPVRNIWVIQFGMIACALILPLTFIMGPIRGIPFFWNLVDSSFGVIGILPLYIAYRDIQKLEDVNERGL
>NZ_CP014773.1|WP_067196010.1|5214598_5215936_-|exosortase-N
MLTLPLKTVKPHPLIAFGVVYFALAIWFIPAYFKWDANLVMGVILVPYVCTIEKGNRSLRYLLPALLGVGLAIIAPVNTLFFVALLFVVLLLIEHSIGRVSNIFLLLMLLISPVFGHITRMGEFPVRLWLTEKVANTLALTGMEVSAAGNQIMMGNFEFSVDQACAGLNMLVMSLLICLFVLTWYQRQSGNTLSFKYLWLLAAFTLLLNVVCNFFRILLLVRFKIMPGTFLHDAVGICCLAIYVLLPLLFGIKPLVHSLGKAGKQQARDNAVVTDSRFLLIHLFLLGMILFVAAHITKADHLAGASNPMQIAGYHKKQLGGGILKFENKEALIYLKPTAFYAPEHDPMICWVGSGYVFKSIRQENVAGYDIYTAILTKKQDKIYAAWWFDNGKVKTVNQFSWRWIAARNEGQFYLVNVNAASPEELHKKSVEMLTGDLFKKLNTK
>NZ_CP014773.1|WP_067196011.1|5216047_5218561_-|XrtN-system-VIT-domain-containing-protein
MKKIIVNYLSDKLTLVGFIMVILSTALFVLMDSFKLGKDPFGAFVINYLMSVGYLIAVFIVTFKRHRGKLSAGKTEHTALLLVLWFISAFALNREMNVFDDSADWLSIWVVASSIAVLLAGNYRLLSGVPRYFTFFFLGAALLLFTYYSFYLMQLYIISIIGLLALGISLHSYVPLCLAILTAGIIIKAGRQDKIALYTALAGFTVPIIAAVFFLVSWNNTNSRINLIINQNTLNEGKLPAWVAVSQQLAPTPVTERILKAGLVYHEVTARDNFFFGGMPNRSFDEKKVHDPLVVLATLFFERPNLNETERINILKAIYNSRHQAQERLWSGDELQTISVISNVKLYPEYRMAYTEKTLTVRNNSRYGWSNQEAIYTFHLLEGSVVSSLSLWIKGKEAKSRLTTKAKADSAYHQIVGVEQHDPSVVHWQEGNTISVRVFPCTTDENRKFRLGITSPLRLNGKRLVYENAYFDGPQATSALETLQLSFSNKLAKLQLPAIFKQSGADVYTADRNYQPGWEISCEAPELAKTAFAFADSTYMVKNFEPQYEAFNPAAVYLDVNSAWTKDEFHAVYSAAMDAPVYVYYNKLLRLKQENIDELYELLRKQNFSLFPVNEIAQPELALLITKGKGESPNLNELEGSGFAVDLSRYLKTPRHIRMYNIGDGLTPYLKTLKELRVFNCAGGTEEKLLTMLTSKQFQRDQENDSTIVISNAGLIIQKAPGLKAVDAPDHLLRLFAYNDIMKKVGPGYFIHNYVQPETIREAEQAYVVSPVSSMIVLETQEDYKRFGIDENKDSLKNASMKSSGAVPEPQEWMLIILATSIVGMFIYRGKRGVPQW
>NZ_CP014773.1|WP_067196013.1|5218614_5218917_-|transcriptional-regulator
MKVTLTNFDKAFENRIRLQIMSVLVANESYDFNSLKELLDVTDGNLASHLKALEKEEYITVNKSFLGRKPNTKYMASALGVQAFKKHLQALENLIKQQKI
>NZ_CP014773.1|WP_067196015.1|5218913_5219525_-|hypothetical-protein
MEDKDLIAEISSIRNIMERSTRFISLSGLSGILAGIYAMIGAWLAYKLIYMGDDSATNVGYDEILTGQLFLLAAVVLILSVATGLLLTVRKAHKKGQRVWNQSSQSLLINGAIPLVTGGIFSLIMLERGYYVVVAPCTLIFYGLALVAASKYTFGDVKWLGIFDIALGLLAAIFPGYGLFFWAFGFGVLHILYGTIMHFKYDR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP014773_1	1.2\|437388\|33\|NZ_CP014773\|PILER-CR	437388-437420	33	NZ_CP014773.1	437010-437042	0	1.0
NZ_CP014773_2	2.1\|941454\|33\|NZ_CP014773\|CRISPRCasFinder	941454-941486	33	NZ_CP014773.1	473122-473154	0	1.0
NZ_CP014773_7	7.1\|2630892\|37\|NZ_CP014773\|PILER-CR	2630892-2630928	37	NZ_CP014773.1	473134-473170	0	1.0
NZ_CP014773_1	1.1\|437272\|62\|NZ_CP014773\|PILER-CR	437272-437333	62	NZ_CP014773.1	436923-436984	2	0.968

1. spacer 1.2|437388|33|NZ_CP014773|PILER-CR matches to position: 437010-437042, mismatch: 0, identity: 1.0

gaagtggcccggctctgatctcacccaccctac	CRISPR spacer
gaagtggcccggctctgatctcacccaccctac	Protospacer
*********************************

2. spacer 2.1|941454|33|NZ_CP014773|CRISPRCasFinder matches to position: 473122-473154, mismatch: 0, identity: 1.0

acggcgggagtagggaatgcatgctgggggcgt	CRISPR spacer
acggcgggagtagggaatgcatgctgggggcgt	Protospacer
*********************************

3. spacer 7.1|2630892|37|NZ_CP014773|PILER-CR matches to position: 473134-473170, mismatch: 0, identity: 1.0

gggaaccccacaggacacgcccccagcatgcattccc	CRISPR spacer
gggaaccccacaggacacgcccccagcatgcattccc	Protospacer
*************************************

4. spacer 1.1|437272|62|NZ_CP014773|PILER-CR matches to position: 436923-436984, mismatch: 2, identity: 0.968

ttgcgatcacccgtcctgtggggtgccgatatgcatcggcatgacgactattttgaagag	CRISPR spacer
ttgcgatcacccgtcctgtggggtgccgatatgcatcggcatgacgactattttgaagag	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2711660 : 2719960

Mycobacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067191012.1\|2711660_2712161_+	low affinity iron permease family protein	A0A1C9EHA1	Mycobacterium_phage	5.4e-05	35.1
WP_067191015.1\|2712129_2712564_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067191017.1\|2712648_2713506_-	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	5.3e-24	31.1
WP_067191019.1\|2713505_2714819_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_067191021.1\|2714966_2717942_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.2e-32	36.6
WP_067197201.1\|2718056_2718536_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	7.0e-34	45.3
WP_067191026.1\|2718535_2718916_-	type II toxin-antitoxin system death-on-curing family toxin	E4ZFM2	Streptococcus_phage	9.2e-13	31.4
WP_067191028.1\|2718912_2719113_-	hypothetical protein	NA	NA	NA	NA
WP_067191030.1\|2719138_2719960_-	thymidylate synthase	A6M9A2	Geobacillus_virus	3.9e-101	61.9

DBSCAN-SWA_2

5381056 : 5392180

Flavobacterium_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067196324.1\|5381056_5382025_-	hypothetical protein	A0A1B0WNF1	Flavobacterium_phage	5.8e-11	39.8
WP_067196326.1\|5382024_5383137_-	AAA family ATPase	NA	NA	NA	NA
WP_082800490.1\|5383137_5383803_-	site-specific DNA-methyltransferase	G4W934	Tetrasphaera_phage	3.0e-43	44.5
WP_067196327.1\|5383811_5385269_-	hypothetical protein	F8J1E8	Lactobacillus_phage	1.4e-29	25.9
WP_067196329.1\|5385277_5385970_-	site-specific DNA-methyltransferase	Q5ZGB2	Flavobacterium_phage	6.7e-62	57.9
WP_067196331.1\|5386186_5386720_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_067196333.1\|5386794_5387019_-	hypothetical protein	NA	NA	NA	NA
WP_067196337.1\|5387049_5387592_-	hypothetical protein	A0A2I7QYL6	Vibrio_phage	3.6e-10	75.7
WP_067196339.1\|5387685_5388075_-	hypothetical protein	M1PXM7	Cellulophaga_phage	3.3e-26	48.4
WP_067196341.1\|5388141_5388498_-	hypothetical protein	NA	NA	NA	NA
WP_157532272.1\|5388601_5389468_-	hypothetical protein	A0A0F7L4N2	uncultured_marine_virus	2.5e-37	43.6
WP_067196345.1\|5389582_5390422_-	AAA family ATPase	A0A1B1P9H8	Acinetobacter_phage	1.9e-47	47.8
WP_067196347.1\|5390441_5390786_-	hypothetical protein	NA	NA	NA	NA
WP_067196349.1\|5390782_5391091_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157532273.1\|5391253_5391493_-	hypothetical protein	NA	NA	NA	NA
WP_067196354.1\|5391508_5392180_-	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	2.9e-22	49.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014773

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection