CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP014769	Hymenobacter sp. PAMC 26554 plasmid unnamed1, complete sequence	0 crisprs	PD-DExK	0	1
NZ_CP014770	Hymenobacter sp. PAMC 26554 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0
NZ_CP014771	Hymenobacter sp. PAMC 26554 chromosome, complete genome	10 crisprs	PD-DExK,cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8b6,cas5,cas6,WYL,Cas9_archaeal,PrimPol	17	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

69845 : 159989

Paenibacillus_phage(12.5%)

transposase,integrase

attL 73824:73839|attR 96912:96927

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082808509.1\|69845_71744_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.9e-42	29.0
WP_157550152.1\|72216_72384_-	hypothetical protein	NA	NA	NA	NA
WP_157550153.1\|72615_73050_+	hypothetical protein	NA	NA	NA	NA
WP_068331837.1\|73046_73352_+	hypothetical protein	NA	NA	NA	NA
WP_068331840.1\|73444_74008_+	hypothetical protein	NA	NA	NA	NA
73824:73839	attL	NA	NA	NA	NA
WP_068331843.1\|74077_75106_+	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	5.8e-110	53.0
WP_068331846.1\|75327_75717_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068331848.1\|75874_76363_+	hypothetical protein	NA	NA	NA	NA
WP_157550154.1\|76374_76998_+	hypothetical protein	NA	NA	NA	NA
WP_068331854.1\|77038_77626_+	SHOCT domain-containing protein	NA	NA	NA	NA
WP_068331857.1\|77664_78930_+	hypothetical protein	NA	NA	NA	NA
WP_068331859.1\|79192_79597_-	hypothetical protein	NA	NA	NA	NA
WP_068331865.1\|80459_81182_-	hypothetical protein	NA	NA	NA	NA
WP_068331872.1\|84577_85786_+	hypothetical protein	A0A1B0WLY9	Flavobacterium_phage	5.9e-21	27.1
WP_082808510.1\|86608_87805_+	replication initiation protein	NA	NA	NA	NA
WP_157550155.1\|88766_89060_-	hypothetical protein	NA	NA	NA	NA
WP_068331881.1\|89128_89893_-	ParA family protein	F0PIG8	Enterococcus_phage	6.6e-10	23.8
WP_082808511.1\|92847_93894_+	replication initiation protein	NA	NA	NA	NA
WP_068331887.1\|94290_94578_-	hypothetical protein	NA	NA	NA	NA
WP_068331889.1\|94576_95407_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_068331892.1\|95473_95785_-	hypothetical protein	NA	NA	NA	NA
WP_157550156.1\|95791_96220_-	hypothetical protein	NA	NA	NA	NA
WP_068331898.1\|96236_96788_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q8W6R2	Burkholderia_virus	2.6e-08	31.7
WP_068331901.1\|96784_97090_-\|transposase	transposase	NA	NA	NA	NA
96912:96927	attR	NA	NA	NA	NA
WP_068331904.1\|97138_97687_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.1e-14	35.8
WP_068331907.1\|97711_98005_-\|transposase	transposase	NA	NA	NA	NA
WP_068331910.1\|98043_98994_-\|transposase	IS481 family transposase	A0A0M3LS26	Mannheimia_phage	5.0e-07	32.9
WP_068331914.1\|99311_100466_+	epoxide hydrolase	NA	NA	NA	NA
WP_068331917.1\|102472_103135_+	recombinase family protein	A0A0F7L6S1	uncultured_marine_virus	1.9e-26	47.3
WP_157550157.1\|103314_103512_+	hypothetical protein	NA	NA	NA	NA
WP_068331920.1\|104053_104662_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_071955021.1\|104744_106124_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_068331926.1\|106164_106578_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_068331929.1\|106669_109024_+	TonB-dependent receptor	NA	NA	NA	NA
WP_068331932.1\|109027_109873_+	DUF4249 domain-containing protein	NA	NA	NA	NA
WP_068331935.1\|110148_111387_+	carboxylesterase family protein	NA	NA	NA	NA
WP_071955022.1\|111801_112221_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157550158.1\|112175_112823_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_068332191.1\|113189_113918_+	ABC transporter permease	NA	NA	NA	NA
WP_157550159.1\|114154_115309_+	hypothetical protein	NA	NA	NA	NA
WP_068331940.1\|115708_116590_+	N-acetylneuraminate synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	1.2e-20	26.4
WP_068331943.1\|117349_117727_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068331946.1\|118330_119155_+	pirin family protein	NA	NA	NA	NA
WP_068331949.1\|119223_119820_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_157550169.1\|119920_120829_-	chlorophyllase	NA	NA	NA	NA
WP_068331954.1\|121016_121898_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_068331957.1\|122277_122673_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157550160.1\|122990_123461_+	hypothetical protein	NA	NA	NA	NA
WP_068331963.1\|123496_123868_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.1e-16	38.5
WP_157550161.1\|123906_124278_+\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	1.3e-08	35.0
WP_068331969.1\|124270_124741_-\|transposase	transposase	NA	NA	NA	NA
WP_068331972.1\|124697_124991_-\|transposase	transposase	NA	NA	NA	NA
WP_068331975.1\|125471_125804_+	hypothetical protein	NA	NA	NA	NA
WP_068331978.1\|125995_126346_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_071955026.1\|126394_126706_-	type II toxin-antitoxin system HigB family toxin	NA	NA	NA	NA
WP_068331984.1\|127067_127889_-	universal stress protein	NA	NA	NA	NA
WP_068331987.1\|128087_129680_+	oleate hydratase	NA	NA	NA	NA
WP_068331990.1\|129733_130720_+	2-hydroxyacid dehydrogenase	M1H9J0	Paramecium_bursaria_Chlorella_virus	2.2e-50	34.7
WP_068331994.1\|131101_131329_+	hypothetical protein	NA	NA	NA	NA
WP_157550162.1\|131507_132383_-	polyphosphate kinase 2 family protein	NA	NA	NA	NA
WP_068332002.1\|132502_133933_-	BON domain-containing protein	NA	NA	NA	NA
WP_068332005.1\|134653_135484_+	universal stress protein	NA	NA	NA	NA
WP_068332009.1\|135512_135989_+	BLUF domain-containing protein	NA	NA	NA	NA
WP_082808513.1\|135954_137487_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_068332015.1\|137542_138205_+	chemotaxis protein CheB	NA	NA	NA	NA
WP_068332018.1\|138398_138935_+	hypothetical protein	NA	NA	NA	NA
WP_068332021.1\|139085_140534_+	BON domain-containing protein	NA	NA	NA	NA
WP_068332024.1\|140543_140765_+	hypothetical protein	NA	NA	NA	NA
WP_068332027.1\|140801_141632_+	universal stress protein	NA	NA	NA	NA
WP_068332030.1\|141681_142335_+	peroxiredoxin	NA	NA	NA	NA
WP_068332034.1\|142438_142651_+	hypothetical protein	NA	NA	NA	NA
WP_082808514.1\|143067_145518_+	plasma-membrane proton-efflux P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.6e-36	25.3
WP_068332043.1\|145816_146569_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	2.1e-24	32.2
WP_068332046.1\|146610_146901_+	hypothetical protein	NA	NA	NA	NA
WP_068332048.1\|146916_147558_+	HAD family phosphatase	NA	NA	NA	NA
WP_068332051.1\|147575_148781_+	acetate/propionate family kinase	NA	NA	NA	NA
WP_068332054.1\|148794_151197_+	phosphoketolase family protein	NA	NA	NA	NA
WP_068332198.1\|151292_152315_+	fructose-bisphosphate aldolase class I	A0A0K0KVJ8	Prochlorococcus_phage	4.3e-73	49.6
WP_157550163.1\|152316_152685_+	hypothetical protein	NA	NA	NA	NA
WP_068332202.1\|152789_152978_-	CsbD family protein	NA	NA	NA	NA
WP_071955028.1\|153481_156124_+	cation-translocating P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	2.0e-74	29.3
WP_068332060.1\|156685_158197_+	BON domain-containing protein	NA	NA	NA	NA
WP_068332063.1\|158458_159016_+	hypothetical protein	NA	NA	NA	NA
WP_157550164.1\|159135_159534_+	hypothetical protein	NA	NA	NA	NA
WP_082808515.1\|159512_159989_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP014771

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014771_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_1

789869-798571

Unclear

Consensus_repeat	Method
ATTTCAATTCCACCTGGTCCGATTGAAGC	CRISPRCasFinder
ATTTCAATTCCACCTGGTCCGATTGAAGC	CRT
ATTTCAATTCCACCTGGTCCGATTGAAGC	PILER-CR

133 spacers

cas2,cas1,cas4,cas7,cas8b6,cas3,cas5,cas6

The CRISPR arrays of NZ_CP014771_1

>merge|NZ_CP014771|1|789869-798571|CRISPRCasFinder,CRT,PILER-CR
TTTTCTACTTCACAAGGTCTGATTGAAGCTGGCTTAGTTTACTCTCAGCTACCTGGGAAGAAGACAAATTTCAATTCCACCTGGTCCGATTGAAGCTAAGTCTTCAAAGGTTACCCGCGCCCGGCATAGCTTATTTCAATTCCACCTGGTCCGATTGAAGCTGGCACACCGCGCCCGACGCCCTACCCGCGCCCACGTATTTCAATTCCACCTGGTCCGATTGAAGCTTGCGCTAAGAGTGAGGGGATAGCCGAATGCCTTCAATTTCAATTCCACCTGGTCCGATTGAAGCCGTGCGGTAGGGCGCGGTGCTGCGCCTGGCTTAGGTATTTCAATTCCACCTGGTCCGATTGAAGCGCTGGACCTGGTACTTCACCAACCCGCACCCCCCCAATTTCAATTCCACCTGGTCCGATTGAAGCCACCGTGACAAGCACGCAGGCACTACGCATTAGCAAATTTCAATTCCACCTGGTCCGATTGAAGCTACAGCAGCAAATCGGGCCGAATCTTCACCGTCAGGCATTTCAATTCCACCTGGTCCGATTGAAGCGCGGCGGCAGCCTCAGCGGCCCTAAAGCGGGCCGCAAATTTCAATTCCACCTGGTCCGATTGAAGCAAGTTCAGATGGCCATTGAGTGGTGCCGCGTGAACATTTCAATTCCACCTGGTCCGATTGAAGCGCTGAAATCAACCAGCGTTACGAATGCAACCGCAATATTTCAATTCCACCTGGTCCGATTGAAGCGGACCGCCGAAGGCCAGGCGGCGCGTCGCCTCGGACATTTCAATTCCACCTGGTCCGATTGAAGCACGAAAGCCCTGCACGCCGAAATCAGCGAGTTGAACATTTCAATTCCACCTGGTCCGATTGAAGCTACTGAGCAGCTTTGCCCTGCTGCTGGGCCTGCTGGCATTTCAATTCCACCTGGTCCGATTGAAGCCCTGCTCCTGCGCGTACTTGGCCTGCGTCGTAGCAGATTTCAATTCCACCTGGTCCGATTGAAGCTTCTTCGCTGACTTTAACAGCAGCTCAACTTCCTCAATTTCAATTCCACCTGGTCCGATTGAAGCGTGGCCGCCGCGGGCCTGGTGCTGGTGGTCTGGGAATTTCAATTCCACCTGGTCCGATTGAAGCCCCTGGGTGGGTTAGTCTGCTTGGCTGTAGAAGTCGCATTTCAATTCCACCTGGTCCGATTGAAGCTAGGTGGGCCAGGCAGCGCCCACCGGCAGGCGGAACACATTTCAATTCCACCTGGTCCGATTGAAGCGTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAAATTTCAATTCCACCTGGTCCGATTGAAGCCTGGCCGCCGCCGTGCGCCGCCGCCGCTACTGCATTTCAATTCCACCTGGTCCGATTGAAGCGCGGAACCAGGGGGGTAGGGTTTCAGGCGGCGCGAAATTTCAATTCCACCTGGTCCGATTGAAGCGGTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAAATTTCAATTCCACCTGGTCCGATTGAAGCCAGCCGCACACGAGGGCGCAGGCTTTCCAGTAGCCGATTTCAATTCCACCTGGTCCGATTGAAGCGGGGTTGCCGGGCAACACACATCTGGCCCTGGTGAAATTTCAATTCCACCTGGTCCGATTGAAGCCCAGGCCCTAGCCAAACAGGCCGCCGAAATTTTCAAATTTCAATTCCACCTGGTCCGATTGAAGCCACTACTAGTGCCGCCAACCGCGTTAGTTACCGAAAATTTCAATTCCACCTGGTCCGATTGAAGCGGCGGGGGCGGCGAGTTGCTTCGTGGCGCGCTGCTCATTTCAATTCCACCTGGTCCGATTGAAGCTGCTTTTTGCTGGACTTGTCGGGTGCCATTTTACCGATTTCAATTCCACCTGGTCCGATTGAAGCTCTGGCCCAGCCTTCCCGGTAGGCGGCGCGCGTGGTATTTCAATTCCACCTGGTCCGATTGAAGCTCCGGCTCCCGCAGTACCGACAGGGGAGCCCGCGTTATTTCAATTCCACCTGGTCCGATTGAAGCGGGTTGCCAGGCAAGACGCACCGCGCGCGGGTGAATATTTCAATTCCACCTGGTCCGATTGAAGCATTGCTCCACCACCAGCACCGTTACCCGCAGATTCTATTTCAATTCCACCTGGTCCGATTGAAGCTAATTCCCGCAGATATCGGCCACGTCCTCATTGGTCAATTTCAATTCCACCTGGTCCGATTGAAGCTGCGGTGCTTGGCCACGTCGAAGAGCACCGTGTCGCATTTCAATTCCACCTGGTCCGATTGAAGCGGTTTCCATATCGTGGCAACGCCGGTGAAGGTGGTGATTTCAATTCCACCTGGTCCGATTGAAGCTCCCCGTCCCCGTGGCCGTCAGCAAGTAACTCGCCATTTCAATTCCACCTGGTCCGATTGAAGCCCGCACCGCCTACCTGTTTCCCAGCAAGACCAAGCCGATTTCAATTCCACCTGGTCCGATTGAAGCGAGGCCAGCGGGTGAGCGGCTATGCCGGTCGGTCGTCATTTCAATTCCACCTGGTCCGATTGAAGCCGAGCCACTTGGCGATGGGGTAGAAGAGCTTGCCGACATTTCAATTCCACCTGGTCCGATTGAAGCCAGATGCACCTCCCCGGCGGCCCGGACCACGACTTATTTCAATTCCACCTGGTCCGATTGAAGCGATTTCGGCCCAGGTGTAGGGCGGCGCGGTAGGATAATTTCAATTCCACCTGGTCCGATTGAAGCGCGGCTTTCGCGGTAAAAAGGATACACGAAGGTATCATTTCAATTCCACCTGGTCCGATTGAAGCCGTGCCCTTCCTGCTGAGCGGCCACGGCGCAAAACAATTTCAATTCCACCTGGTCCGATTGAAGCATTTTACGGAGCGGTGGACACCAAGAATATAGCCCCAATTTCAATTCCACCTGGTCCGATTGAAGCCCTGCTGGCCTGTGTACAGATACGCGGTGAAGTAAGCCATTTCAATTCCACCTGGTCCGATTGAAGCGAGCTAATTGAAAAAAAGGTCAGTGTGTTAATCACCATTTCAATTCCACCTGGTCCGATTGAAGCACCAGCTCGTGGGCCAGGTCGTTGTACACTTCGACCATTTCAATTCCACCTGGTCCGATTGAAGCGAGGTCCGTAGGCGGCCCGTGTGCTTGAACTTGCGCATTTCAATTCCACCTGGTCCGATTGAAGCGACTGCCGACCGGGCCGAGTACGTGGATATTCAGAAATTTCAATTCCACCTGGTCCGATTGAAGCTACCGCAAGCACGAGCTGGCCCCCTTGGACTTCTACCATTTCAATTCCACCTGGTCCGATTGAAGCGATATTCTCTACACGAATAACGATATCATCACCTGTATTTCAATTCCACCTGGTCCGATTGAAGCCAGCGGGTGGGCCTGCTGGCCCCCGGCGTGTACCGATTTCAATTCCACCTGGTCCGATTGAAGCCCCGCCAGCAGTTCGCCCAGGATTTCGACTTGTACCATTTCAATTCCACCTGGTCCGATTGAAGCTCCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCAATTTCAATTCCACCTGGTCCGATTGAAGCTAAATCGCCGCCGCGAGCGAAATACGTTAGTAGGAAATTTCAATTCCACCTGGTCCGATTGAAGCTGCTGTACCAGGTCCAGCCCAAGGCCTTCATTACGCATTTCAATTCCACCTGGTCCGATTGAAGCCGTTTTGCATGGCCTTCAGGGCTGCCGCGGCCTGCTATTTCAATTCCACCTGGTCCGATTGAAGCGGTAGCTGGCGCGGTAGTGGGGTCGGTGGCAGTGGTATTTCAATTCCACCTGGTCCGATTGAAGCGCCGTCGTCCGCGAAATAATAGGCGGGCTTGCCGAAATTTCAATTCCACCTGGTCCGATTGAAGCTTTGGCCAACAACCCAATCGGCCCAGTCGGCTCCGATTTCAATTCCACCTGGTCCGATTGAAGCCCTGGTGCGCGCAGTCGCGCAGTAGGTACTGCTGCTCATTTCAATTCCACCTGGTCCGATTGAAGCGCGGCCACGTCTTGGCTGCTAATCCAGGTGCGCAGGTATTTCAATTCCACCTGGTCCGATTGAAGCGGCCAACGGCGGCTTTAAGGCGGCGGCCGACCAGCTATTTCAATTCCACCTGGTCCGATTGAAGCCGGGTCGCTGCTGTGAAAGAGGTAGAGCCGGAAGTCATTTCAATTCCACCTGGTCCGATTGAAGCCCTCCTGCCCCACCGCGGGTATCGGTTCGGCCTAAAGATTTCAATTCCACCTGGTCCGATTGAAGCGCGATGGCGGTGGAGCACCGGCGCGGCGTTGGGGTCATTTCAATTCCACCTGGTCCGATTGAAGCTTCTCTACTCCAGCCCTGGGCCACGCTCGTGATGCTATTTCAATTCCACCTGGTCCGATTGAAGCCGCGTACCACTTGGTCCACGGTGGTGGCCAGCAGCTTATTTCAATTCCACCTGGTCCGATTGAAGCCACGAGCAGGGGCAACAGATTGGTGGCGGCAGTTTCATTTCAATTCCACCTGGTCCGATTGAAGCCCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCAATTTCAATTCCACCTGGTCCGATTGAAGCTCGTGGCCGGCGTCGGCGGCTATATCTGCGTGCAGGATTTCAATTCCACCTGGTCCGATTGAAGCTGAGAATCTTTTCGCTCAGGCCACTCTTGATTTTCCATTTCAATTCCACCTGGTCCGATTGAAGCTCTGGAGCTGATTAACTCCTGGGGGCCCTCGTTTTCATTTCAATTCCACCTGGTCCGATTGAAGCTAGGAGCAACTGCTTATCCTGAACCCGGATGATTTTCATTTCAATTCCACCTGGTCCGATTGAAGCGGTTGGTTTGGGGGTTGCCATAAGTGGGCGGTGGTTATTTCAATTCCACCTGGTCCGATTGAAGCCGGTAGCTGCTTTGCTGGCCACGTAGGCGCTGAAATATTTCAATTCCACCTGGTCCGATTGAAGCTACGACGAGCTGAAGCGCCACAAAATCACGCTCGACCATTTCAATTCCACCTGGTCCGATTGAAGCCAAATTACGAGCGGCACCTTTACGATGGACCCGACCATTTCAATTCCACCTGGTCCGATTGAAGCGCCATTACGACCAGCGTAGCCGGCGGTACCGTCCTGGTATTTCAATTCCACCTGGTCCGATTGAAGCGAGACGTCCGGAGCGGTTAGCTGCTGGCCCTTCGCTATTTCAATTCCACCTGGTCCGATTGAAGCCCGTGAGCCGGGTGATGATGATGTTGGAGCCCAGCAGATTTCAATTCCACCTGGTCCGATTGAAGCCGGTCGAACCCCGCCTGGACCCCGGCCCAGGCCCACCATTTCAATTCCACCTGGTCCGATTGAAGCCCAGCGTGGCCGCGCCGTAGAAGATGACTTCCACCAATTTCAATTCCACCTGGTCCGATTGAAGCAGTCCTGCACGATGGTCACCGGGCCGCGCTGCACGAATTTCAATTCCACCTGGTCCGATTGAAGCCATAGTGCTTGGCGGCCAGCGCGGCTACTTGTGCGTAATTTCAATTCCACCTGGTCCGATTGAAGCGCCATTGTTGTCTTGGTCCATAGAGGAATCGTCTGAATTTCAATTCCACCTGGTCCGATTGAAGCAAAATATACCTGTCCTGCCTGTTCTGCTAATGTCTGATTTCAATTCCACCTGGTCCGATTGAAGCAAAATCTCCCTACGGCGAATCTGTGCCGTGCCTAGTATTTCAATTCCACCTGGTCCGATTGAAGCAGGGATGAGTACGAGGCTCGGTTTATTTACTTGTCTATTTCAATTCCACCTGGTCCGATTGAAGCGCTTCAATGGCCCTTAGGCGGGTGGCATAGAGCTTAATTTCAATTCCACCTGGTCCGATTGAAGCGCAACAAAACCAAGTCGGTGATTGAGGATGCTACGGCATTTCAATTCCACCTGGTCCGATTGAAGCGGCCACCGTGAGACTGGTAACGGCCCCTTGCTCCTGATTTCAATTCCACCTGGTCCGATTGAAGCTCTGTGGCTGGAGGCAATGGGTCTGCTCAATGATGCTATTTCAATTCCACCTGGTCCGATTGAAGCAACCCAGTGGCGTAGCGAGGTGAGGGTAGGTAGCTAATTTCAATTCCACCTGGTCCGATTGAAGCGGCAAGAATGAGCGCGGCCACAACACCGTCGAAAAATTTCAATTCCACCTGGTCCGATTGAAGCGCTCGGCGGATTGCGGGGATTGGGGTAGGGGATACATATTTCAATTCCACCTGGTCCGATTGAAGCGGGGTCGCCCGTGCCGTTGCCGGTTATCTCAATGGTATTTCAATTCCACCTGGTCCGATTGAAGCGAATTACAAAAGTCTCGCGGCGCAACCTACAATATTATTTCAATTCCACCTGGTCCGATTGAAGCGGCGAGGCCAGCAACGTTTTCACCAACAATCCAACGATTTCAATTCCACCTGGTCCGATTGAAGCCGTGAAACGCTCCTCTTCGTCCATTGCGCTCCAACCAATTTCAATTCCACCTGGTCCGATTGAAGCAAAAAATGCTTATTACTGTATTTCAGCAACTTAGAAATTTCAATTCCACCTGGTCCGATTGAAGCTTAAGACGCCAAGGACGCGAGGAAGTGTTCACGCGACATTTCAATTCCACCTGGTCCGATTGAAGCGGGGTCGTCTCAATTGCGCAACTGGTTGGCCTGCGCTATTTCAATTCCACCTGGTCCGATTGAAGCTAGTCGTGTGTCGGGTTGCCCCCCGTCCAGTAATACGATTTCAATTCCACCTGGTCCGATTGAAGCCCTACGTTGCGCACGTGCGCTGTGGTTACCTCGTCGTATTTCAATTCCACCTGGTCCGATTGAAGCGGCGGTGCTGGTTCCATTTTACGAGAAGGTAACCCTATTTCAATTCCACCTGGTCCGATTGAAGCAACAACATGGCAAATTTCTCGAATTATGGCCCTTCGATTTCAATTCCACCTGGTCCGATTGAAGCCAAGACCAGTAATTTCTACGACCCCACGCAGCCCGAAATTTCAATTCCACCTGGTCCGATTGAAGCGCAATTGCAACAGGTGGAAGCCTTTCAAGCCCTGTATTTCAATTCCACCTGGTCCGATTGAAGCAGCATAGCTGCGCCCAAAAGTCGGCCAGCGTCAACTATTTCAATTCCACCTGGTCCGATTGAAGCGCCGGGTTGCCAGTATAGCAGTAGGGGCCAACACTATTTCAATTCCACCTGGTCCGATTGAAGCGCCATCAGCAACAGCGTTGCAAGAAGCATACTGAGCGGATTTCAATTCCACCTGGTCCGATTGAAGCAACAAGCTGCGCCTCACCGACATGCTGGCCTTCGTGATTTCAATTCCACCTGGTCCGATTGAAGCCGCCGCCCCTCGGCGCTACTGATTCGACCACTACGCTATTTCAATTCCACCTGGTCCGATTGAAGCCGGCGGCGTGGGCTTCGGGGTTGAGAGGTTCCATATATTTCAATTCCACCTGGTCCGATTGAAGCGCGTTGGAGTGACTCCTGTGCAACATTTTTTAGCCTATTTCAATTCCACCTGGTCCGATTGAAGCGACGCCGACCCTGGCCAGCGCGGTGATGCCTTTGATATTTCAATTCCACCTGGTCCGATTGAAGCTCTGGAGGCGGTGCAGATTGTCCACCCAGCGCTCCAATTTCAATTCCACCTGGTCCGATTGAAGCCTCCAGCACCGTGCGCAGGTAGAGCATCGGCACCACATTTCAATTCCACCTGGTCCGATTGAAGCGCGCGAAACGGGCACCATCGCCGGGCTGGCGTAGTCATTTCAATTCCACCTGGTCCGATTGAAGCCTGGCACCGTAATAATCCACTGCTTCGGCGCTGGCCAATTTCAATTCCACCTGGTCCGATTGAAGCCAAGTATTCCCTTGGTGCCGACCGCTTTGCCACGATATTTCAATTCCACCTGGTCCGATTGAAGCCGTAGCCCGTTAGCACCGCTTCGCGCAGCGCCTGCGAATTTCAATTCCACCTGGTCCGATTGAAGCCGCGTGGGCGCCAGGCTCACGAGGGGGCTGAATGCCATTTCAATTCCACCTGGTCCGATTGAAGCTCGTTGAGGCCCGTAAAGAGTCGCGCTAGCACGGTGATTTCAATTCCACCTGGTCCGATTGAAGCCGGCAATGGTACCCTGCTTGGCCTTCTCCGCTTCCTATTTCAATTCCACCTGGTCCGATTGAAGCCAGGCTCTTGGCCTGCGCCAAGGTATCGAGTGTCATATTTCAATTCCACCTGGTCCGATTGAAGCAGCGCCTGCTGGCTGGCCTGGTCCGTGCGGTTCTTATTTCAATTCCACCTGGTCCGATTGAAGCGGGGTAGGACTCATGGGCGACGAACGGGTTTGCGCTATTTCAATTCCACCTGGTCCGATTGAAGCACCGCGTCGTCGATGGTCTGGGTATCGAGGTGCAGCATTTCAATTCCACCTGGTCCGATTGAAGCTTGCCGAACTCGATGGCCTTGAAAATTAGCTCCAGCATTTCAATTCCACCTGGTCCGATTGAAGCGTAAGCCTGCTCGTGGTGGCTACCATGATATGCCGTATTTCAATTCCACCTGGTCCGATTGAAGC

>NZ_CP014771|1|1|789869-798571|CRISPRCasFinder
TTTTCTACTTCACAAGGTCTGATTGAAGC	TGGCTTAGTTTACTCTCAGCTACCTGGGAAGAAGACAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAGTCTTCAAAGGTTACCCGCGCCCGGCATAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGGCACACCGCGCCCGACGCCCTACCCGCGCCCACGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCGCTAAGAGTGAGGGGATAGCCGAATGCCTTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCGGTAGGGCGCGGTGCTGCGCCTGGCTTAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGGACCTGGTACTTCACCAACCCGCACCCCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACCGTGACAAGCACGCAGGCACTACGCATTAGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACAGCAGCAAATCGGGCCGAATCTTCACCGTCAGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCGGCAGCCTCAGCGGCCCTAAAGCGGGCCGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAGTTCAGATGGCCATTGAGTGGTGCCGCGTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGAAATCAACCAGCGTTACGAATGCAACCGCAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGACCGCCGAAGGCCAGGCGGCGCGTCGCCTCGGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACGAAAGCCCTGCACGCCGAAATCAGCGAGTTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACTGAGCAGCTTTGCCCTGCTGCTGGGCCTGCTGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTCCTGCGCGTACTTGGCCTGCGTCGTAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTTCGCTGACTTTAACAGCAGCTCAACTTCCTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCGCCGCGGGCCTGGTGCTGGTGGTCTGGGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCTGGGTGGGTTAGTCTGCTTGGCTGTAGAAGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGTGGGCCAGGCAGCGCCCACCGGCAGGCGGAACAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCCGCCGCCGTGCGCCGCCGCCGCTACTGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGAACCAGGGGGGTAGGGTTTCAGGCGGCGCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCCGCACACGAGGGCGCAGGCTTTCCAGTAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTTGCCGGGCAACACACATCTGGCCCTGGTGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGGCCCTAGCCAAACAGGCCGCCGAAATTTTCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACTACTAGTGCCGCCAACCGCGTTAGTTACCGAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGGGGCGGCGAGTTGCTTCGTGGCGCGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTTTTTGCTGGACTTGTCGGGTGCCATTTTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGCCCAGCCTTCCCGGTAGGCGGCGCGCGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGCTCCCGCAGTACCGACAGGGGAGCCCGCGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGTTGCCAGGCAAGACGCACCGCGCGCGGGTGAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTGCTCCACCACCAGCACCGTTACCCGCAGATTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAATTCCCGCAGATATCGGCCACGTCCTCATTGGTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCGGTGCTTGGCCACGTCGAAGAGCACCGTGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTTCCATATCGTGGCAACGCCGGTGAAGGTGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCCCGTCCCCGTGGCCGTCAGCAAGTAACTCGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGCACCGCCTACCTGTTTCCCAGCAAGACCAAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGCCAGCGGGTGAGCGGCTATGCCGGTCGGTCGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGAGCCACTTGGCGATGGGGTAGAAGAGCTTGCCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGATGCACCTCCCCGGCGGCCCGGACCACGACTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATTTCGGCCCAGGTGTAGGGCGGCGCGGTAGGATA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCTTTCGCGGTAAAAAGGATACACGAAGGTATC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCCCTTCCTGCTGAGCGGCCACGGCGCAAAACA
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTTTACGGAGCGGTGGACACCAAGAATATAGCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTGGCCTGTGTACAGATACGCGGTGAAGTAAGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGCTAATTGAAAAAAAGGTCAGTGTGTTAATCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCAGCTCGTGGGCCAGGTCGTTGTACACTTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGTCCGTAGGCGGCCCGTGTGCTTGAACTTGCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACTGCCGACCGGGCCGAGTACGTGGATATTCAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACCGCAAGCACGAGCTGGCCCCCTTGGACTTCTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATATTCTCTACACGAATAACGATATCATCACCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCGGGTGGGCCTGCTGGCCCCCGGCGTGTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCGCCAGCAGTTCGCCCAGGATTTCGACTTGTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAATCGCCGCCGCGAGCGAAATACGTTAGTAGGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTGTACCAGGTCCAGCCCAAGGCCTTCATTACGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTTTTGCATGGCCTTCAGGGCTGCCGCGGCCTGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTAGCTGGCGCGGTAGTGGGGTCGGTGGCAGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGTCGTCCGCGAAATAATAGGCGGGCTTGCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTTGGCCAACAACCCAATCGGCCCAGTCGGCTCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGGTGCGCGCAGTCGCGCAGTAGGTACTGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCCACGTCTTGGCTGCTAATCCAGGTGCGCAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCAACGGCGGCTTTAAGGCGGCGGCCGACCAGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGGTCGCTGCTGTGAAAGAGGTAGAGCCGGAAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTCCTGCCCCACCGCGGGTATCGGTTCGGCCTAAAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGATGGCGGTGGAGCACCGGCGCGGCGTTGGGGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTCTACTCCAGCCCTGGGCCACGCTCGTGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTACCACTTGGTCCACGGTGGTGGCCAGCAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACGAGCAGGGGCAACAGATTGGTGGCGGCAGTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTGGCCGGCGTCGGCGGCTATATCTGCGTGCAGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGAGAATCTTTTCGCTCAGGCCACTCTTGATTTTCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGCTGATTAACTCCTGGGGGCCCTCGTTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGAGCAACTGCTTATCCTGAACCCGGATGATTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTGGTTTGGGGGTTGCCATAAGTGGGCGGTGGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTAGCTGCTTTGCTGGCCACGTAGGCGCTGAAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACGACGAGCTGAAGCGCCACAAAATCACGCTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAATTACGAGCGGCACCTTTACGATGGACCCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTACGACCAGCGTAGCCGGCGGTACCGTCCTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGACGTCCGGAGCGGTTAGCTGCTGGCCCTTCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGTGAGCCGGGTGATGATGATGTTGGAGCCCAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTCGAACCCCGCCTGGACCCCGGCCCAGGCCCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGCGTGGCCGCGCCGTAGAAGATGACTTCCACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGTCCTGCACGATGGTCACCGGGCCGCGCTGCACGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CATAGTGCTTGGCGGCCAGCGCGGCTACTTGTGCGTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTGTTGTCTTGGTCCATAGAGGAATCGTCTGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATATACCTGTCCTGCCTGTTCTGCTAATGTCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATCTCCCTACGGCGAATCTGTGCCGTGCCTAGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGGGATGAGTACGAGGCTCGGTTTATTTACTTGTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTTCAATGGCCCTTAGGCGGGTGGCATAGAGCTTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAACAAAACCAAGTCGGTGATTGAGGATGCTACGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCACCGTGAGACTGGTAACGGCCCCTTGCTCCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGTGGCTGGAGGCAATGGGTCTGCTCAATGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACCCAGTGGCGTAGCGAGGTGAGGGTAGGTAGCTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCAAGAATGAGCGCGGCCACAACACCGTCGAAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTCGGCGGATTGCGGGGATTGGGGTAGGGGATACAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGCCCGTGCCGTTGCCGGTTATCTCAATGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAATTACAAAAGTCTCGCGGCGCAACCTACAATATT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGAGGCCAGCAACGTTTTCACCAACAATCCAACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGAAACGCTCCTCTTCGTCCATTGCGCTCCAACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAAAATGCTTATTACTGTATTTCAGCAACTTAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTAAGACGCCAAGGACGCGAGGAAGTGTTCACGCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGTCTCAATTGCGCAACTGGTTGGCCTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGTCGTGTGTCGGGTTGCCCCCCGTCCAGTAATACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTACGTTGCGCACGTGCGCTGTGGTTACCTCGTCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGTGCTGGTTCCATTTTACGAGAAGGTAACCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAACATGGCAAATTTCTCGAATTATGGCCCTTCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGACCAGTAATTTCTACGACCCCACGCAGCCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAATTGCAACAGGTGGAAGCCTTTCAAGCCCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCATAGCTGCGCCCAAAAGTCGGCCAGCGTCAACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGGGTTGCCAGTATAGCAGTAGGGGCCAACACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATCAGCAACAGCGTTGCAAGAAGCATACTGAGCGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAAGCTGCGCCTCACCGACATGCTGGCCTTCGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCCGCCCCTCGGCGCTACTGATTCGACCACTACGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCGGCGTGGGCTTCGGGGTTGAGAGGTTCCATAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGTTGGAGTGACTCCTGTGCAACATTTTTTAGCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACGCCGACCCTGGCCAGCGCGGTGATGCCTTTGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGGCGGTGCAGATTGTCCACCCAGCGCTCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTCCAGCACCGTGCGCAGGTAGAGCATCGGCACCAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGCGAAACGGGCACCATCGCCGGGCTGGCGTAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCACCGTAATAATCCACTGCTTCGGCGCTGGCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGTATTCCCTTGGTGCCGACCGCTTTGCCACGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTAGCCCGTTAGCACCGCTTCGCGCAGCGCCTGCGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTGGGCGCCAGGCTCACGAGGGGGCTGAATGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTTGAGGCCCGTAAAGAGTCGCGCTAGCACGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCAATGGTACCCTGCTTGGCCTTCTCCGCTTCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGGCTCTTGGCCTGCGCCAAGGTATCGAGTGTCAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCGCCTGCTGGCTGGCCTGGTCCGTGCGGTTCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTAGGACTCATGGGCGACGAACGGGTTTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCGCGTCGTCGATGGTCTGGGTATCGAGGTGCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCCGAACTCGATGGCCTTGAAAATTAGCTCCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTAAGCCTGCTCGTGGTGGCTACCATGATATGCCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC

>NZ_CP014771|1|1|789869-798571|CRT
TTTTCTACTTCACAAGGTCTGATTGAAGC	TGGCTTAGTTTACTCTCAGCTACCTGGGAAGAAGACAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAGTCTTCAAAGGTTACCCGCGCCCGGCATAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGGCACACCGCGCCCGACGCCCTACCCGCGCCCACGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCGCTAAGAGTGAGGGGATAGCCGAATGCCTTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCGGTAGGGCGCGGTGCTGCGCCTGGCTTAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGGACCTGGTACTTCACCAACCCGCACCCCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACCGTGACAAGCACGCAGGCACTACGCATTAGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACAGCAGCAAATCGGGCCGAATCTTCACCGTCAGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCGGCAGCCTCAGCGGCCCTAAAGCGGGCCGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAGTTCAGATGGCCATTGAGTGGTGCCGCGTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGAAATCAACCAGCGTTACGAATGCAACCGCAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGACCGCCGAAGGCCAGGCGGCGCGTCGCCTCGGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACGAAAGCCCTGCACGCCGAAATCAGCGAGTTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACTGAGCAGCTTTGCCCTGCTGCTGGGCCTGCTGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTCCTGCGCGTACTTGGCCTGCGTCGTAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTTCGCTGACTTTAACAGCAGCTCAACTTCCTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCGCCGCGGGCCTGGTGCTGGTGGTCTGGGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCTGGGTGGGTTAGTCTGCTTGGCTGTAGAAGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGTGGGCCAGGCAGCGCCCACCGGCAGGCGGAACAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCCGCCGCCGTGCGCCGCCGCCGCTACTGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGAACCAGGGGGGTAGGGTTTCAGGCGGCGCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCCGCACACGAGGGCGCAGGCTTTCCAGTAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTTGCCGGGCAACACACATCTGGCCCTGGTGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGGCCCTAGCCAAACAGGCCGCCGAAATTTTCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACTACTAGTGCCGCCAACCGCGTTAGTTACCGAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGGGGCGGCGAGTTGCTTCGTGGCGCGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTTTTTGCTGGACTTGTCGGGTGCCATTTTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGCCCAGCCTTCCCGGTAGGCGGCGCGCGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGCTCCCGCAGTACCGACAGGGGAGCCCGCGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGTTGCCAGGCAAGACGCACCGCGCGCGGGTGAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTGCTCCACCACCAGCACCGTTACCCGCAGATTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAATTCCCGCAGATATCGGCCACGTCCTCATTGGTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCGGTGCTTGGCCACGTCGAAGAGCACCGTGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTTCCATATCGTGGCAACGCCGGTGAAGGTGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCCCGTCCCCGTGGCCGTCAGCAAGTAACTCGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGCACCGCCTACCTGTTTCCCAGCAAGACCAAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGCCAGCGGGTGAGCGGCTATGCCGGTCGGTCGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGAGCCACTTGGCGATGGGGTAGAAGAGCTTGCCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGATGCACCTCCCCGGCGGCCCGGACCACGACTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATTTCGGCCCAGGTGTAGGGCGGCGCGGTAGGATA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCTTTCGCGGTAAAAAGGATACACGAAGGTATC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCCCTTCCTGCTGAGCGGCCACGGCGCAAAACA
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTTTACGGAGCGGTGGACACCAAGAATATAGCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTGGCCTGTGTACAGATACGCGGTGAAGTAAGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGCTAATTGAAAAAAAGGTCAGTGTGTTAATCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCAGCTCGTGGGCCAGGTCGTTGTACACTTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGTCCGTAGGCGGCCCGTGTGCTTGAACTTGCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACTGCCGACCGGGCCGAGTACGTGGATATTCAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACCGCAAGCACGAGCTGGCCCCCTTGGACTTCTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATATTCTCTACACGAATAACGATATCATCACCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCGGGTGGGCCTGCTGGCCCCCGGCGTGTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCGCCAGCAGTTCGCCCAGGATTTCGACTTGTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAATCGCCGCCGCGAGCGAAATACGTTAGTAGGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTGTACCAGGTCCAGCCCAAGGCCTTCATTACGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTTTTGCATGGCCTTCAGGGCTGCCGCGGCCTGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTAGCTGGCGCGGTAGTGGGGTCGGTGGCAGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGTCGTCCGCGAAATAATAGGCGGGCTTGCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTTGGCCAACAACCCAATCGGCCCAGTCGGCTCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGGTGCGCGCAGTCGCGCAGTAGGTACTGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCCACGTCTTGGCTGCTAATCCAGGTGCGCAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCAACGGCGGCTTTAAGGCGGCGGCCGACCAGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGGTCGCTGCTGTGAAAGAGGTAGAGCCGGAAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTCCTGCCCCACCGCGGGTATCGGTTCGGCCTAAAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGATGGCGGTGGAGCACCGGCGCGGCGTTGGGGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTCTACTCCAGCCCTGGGCCACGCTCGTGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTACCACTTGGTCCACGGTGGTGGCCAGCAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACGAGCAGGGGCAACAGATTGGTGGCGGCAGTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTGGCCGGCGTCGGCGGCTATATCTGCGTGCAGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGAGAATCTTTTCGCTCAGGCCACTCTTGATTTTCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGCTGATTAACTCCTGGGGGCCCTCGTTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGAGCAACTGCTTATCCTGAACCCGGATGATTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTGGTTTGGGGGTTGCCATAAGTGGGCGGTGGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTAGCTGCTTTGCTGGCCACGTAGGCGCTGAAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACGACGAGCTGAAGCGCCACAAAATCACGCTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAATTACGAGCGGCACCTTTACGATGGACCCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTACGACCAGCGTAGCCGGCGGTACCGTCCTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGACGTCCGGAGCGGTTAGCTGCTGGCCCTTCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGTGAGCCGGGTGATGATGATGTTGGAGCCCAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTCGAACCCCGCCTGGACCCCGGCCCAGGCCCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGCGTGGCCGCGCCGTAGAAGATGACTTCCACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGTCCTGCACGATGGTCACCGGGCCGCGCTGCACGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CATAGTGCTTGGCGGCCAGCGCGGCTACTTGTGCGTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTGTTGTCTTGGTCCATAGAGGAATCGTCTGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATATACCTGTCCTGCCTGTTCTGCTAATGTCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATCTCCCTACGGCGAATCTGTGCCGTGCCTAGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGGGATGAGTACGAGGCTCGGTTTATTTACTTGTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTTCAATGGCCCTTAGGCGGGTGGCATAGAGCTTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAACAAAACCAAGTCGGTGATTGAGGATGCTACGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCACCGTGAGACTGGTAACGGCCCCTTGCTCCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGTGGCTGGAGGCAATGGGTCTGCTCAATGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACCCAGTGGCGTAGCGAGGTGAGGGTAGGTAGCTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCAAGAATGAGCGCGGCCACAACACCGTCGAAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTCGGCGGATTGCGGGGATTGGGGTAGGGGATACAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGCCCGTGCCGTTGCCGGTTATCTCAATGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAATTACAAAAGTCTCGCGGCGCAACCTACAATATT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGAGGCCAGCAACGTTTTCACCAACAATCCAACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGAAACGCTCCTCTTCGTCCATTGCGCTCCAACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAAAATGCTTATTACTGTATTTCAGCAACTTAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTAAGACGCCAAGGACGCGAGGAAGTGTTCACGCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGTCTCAATTGCGCAACTGGTTGGCCTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGTCGTGTGTCGGGTTGCCCCCCGTCCAGTAATACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTACGTTGCGCACGTGCGCTGTGGTTACCTCGTCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGTGCTGGTTCCATTTTACGAGAAGGTAACCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAACATGGCAAATTTCTCGAATTATGGCCCTTCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGACCAGTAATTTCTACGACCCCACGCAGCCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAATTGCAACAGGTGGAAGCCTTTCAAGCCCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCATAGCTGCGCCCAAAAGTCGGCCAGCGTCAACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGGGTTGCCAGTATAGCAGTAGGGGCCAACACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATCAGCAACAGCGTTGCAAGAAGCATACTGAGCGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAAGCTGCGCCTCACCGACATGCTGGCCTTCGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCCGCCCCTCGGCGCTACTGATTCGACCACTACGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCGGCGTGGGCTTCGGGGTTGAGAGGTTCCATAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGTTGGAGTGACTCCTGTGCAACATTTTTTAGCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACGCCGACCCTGGCCAGCGCGGTGATGCCTTTGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGGCGGTGCAGATTGTCCACCCAGCGCTCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTCCAGCACCGTGCGCAGGTAGAGCATCGGCACCAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGCGAAACGGGCACCATCGCCGGGCTGGCGTAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCACCGTAATAATCCACTGCTTCGGCGCTGGCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGTATTCCCTTGGTGCCGACCGCTTTGCCACGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTAGCCCGTTAGCACCGCTTCGCGCAGCGCCTGCGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTGGGCGCCAGGCTCACGAGGGGGCTGAATGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTTGAGGCCCGTAAAGAGTCGCGCTAGCACGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCAATGGTACCCTGCTTGGCCTTCTCCGCTTCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGGCTCTTGGCCTGCGCCAAGGTATCGAGTGTCAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCGCCTGCTGGCTGGCCTGGTCCGTGCGGTTCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTAGGACTCATGGGCGACGAACGGGTTTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCGCGTCGTCGATGGTCTGGGTATCGAGGTGCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCCGAACTCGATGGCCTTGAAAATTAGCTCCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTAAGCCTGCTCGTGGTGGCTACCATGATATGCCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC

>NZ_CP014771|1|1|789936-798571|PILER-CR
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAGTCTTCAAAGGTTACCCGCGCCCGGCATAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGGCACACCGCGCCCGACGCCCTACCCGCGCCCACGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCGCTAAGAGTGAGGGGATAGCCGAATGCCTTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCGGTAGGGCGCGGTGCTGCGCCTGGCTTAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGGACCTGGTACTTCACCAACCCGCACCCCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACCGTGACAAGCACGCAGGCACTACGCATTAGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACAGCAGCAAATCGGGCCGAATCTTCACCGTCAGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCGGCAGCCTCAGCGGCCCTAAAGCGGGCCGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAGTTCAGATGGCCATTGAGTGGTGCCGCGTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTGAAATCAACCAGCGTTACGAATGCAACCGCAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGACCGCCGAAGGCCAGGCGGCGCGTCGCCTCGGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACGAAAGCCCTGCACGCCGAAATCAGCGAGTTGAAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACTGAGCAGCTTTGCCCTGCTGCTGGGCCTGCTGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTCCTGCGCGTACTTGGCCTGCGTCGTAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTTCGCTGACTTTAACAGCAGCTCAACTTCCTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCGCCGCGGGCCTGGTGCTGGTGGTCTGGGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCTGGGTGGGTTAGTCTGCTTGGCTGTAGAAGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGTGGGCCAGGCAGCGCCCACCGGCAGGCGGAACAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCCGCCGCCGTGCGCCGCCGCCGCTACTGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGAACCAGGGGGGTAGGGTTTCAGGCGGCGCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTGGCCAGGCGCGCCGAAGGGACCCCTCTGGGGCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCCGCACACGAGGGCGCAGGCTTTCCAGTAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTTGCCGGGCAACACACATCTGGCCCTGGTGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGGCCCTAGCCAAACAGGCCGCCGAAATTTTCAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACTACTAGTGCCGCCAACCGCGTTAGTTACCGAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGGGGCGGCGAGTTGCTTCGTGGCGCGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTTTTTGCTGGACTTGTCGGGTGCCATTTTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGCCCAGCCTTCCCGGTAGGCGGCGCGCGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGCTCCCGCAGTACCGACAGGGGAGCCCGCGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGTTGCCAGGCAAGACGCACCGCGCGCGGGTGAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTGCTCCACCACCAGCACCGTTACCCGCAGATTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAATTCCCGCAGATATCGGCCACGTCCTCATTGGTCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCGGTGCTTGGCCACGTCGAAGAGCACCGTGTCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTTCCATATCGTGGCAACGCCGGTGAAGGTGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCCCGTCCCCGTGGCCGTCAGCAAGTAACTCGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGCACCGCCTACCTGTTTCCCAGCAAGACCAAGCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGCCAGCGGGTGAGCGGCTATGCCGGTCGGTCGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGAGCCACTTGGCGATGGGGTAGAAGAGCTTGCCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGATGCACCTCCCCGGCGGCCCGGACCACGACTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATTTCGGCCCAGGTGTAGGGCGGCGCGGTAGGATA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCTTTCGCGGTAAAAAGGATACACGAAGGTATC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGCCCTTCCTGCTGAGCGGCCACGGCGCAAAACA
ATTTCAATTCCACCTGGTCCGATTGAAGC	ATTTTACGGAGCGGTGGACACCAAGAATATAGCCCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGCTGGCCTGTGTACAGATACGCGGTGAAGTAAGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGCTAATTGAAAAAAAGGTCAGTGTGTTAATCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCAGCTCGTGGGCCAGGTCGTTGTACACTTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGGTCCGTAGGCGGCCCGTGTGCTTGAACTTGCGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACTGCCGACCGGGCCGAGTACGTGGATATTCAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACCGCAAGCACGAGCTGGCCCCCTTGGACTTCTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GATATTCTCTACACGAATAACGATATCATCACCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGCGGGTGGGCCTGCTGGCCCCCGGCGTGTACCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCCGCCAGCAGTTCGCCCAGGATTTCGACTTGTACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAAATCGCCGCCGCGAGCGAAATACGTTAGTAGGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGCTGTACCAGGTCCAGCCCAAGGCCTTCATTACGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTTTTGCATGGCCTTCAGGGCTGCCGCGGCCTGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTAGCTGGCGCGGTAGTGGGGTCGGTGGCAGTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGTCGTCCGCGAAATAATAGGCGGGCTTGCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTTGGCCAACAACCCAATCGGCCCAGTCGGCTCCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTGGTGCGCGCAGTCGCGCAGTAGGTACTGCTGCTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGGCCACGTCTTGGCTGCTAATCCAGGTGCGCAGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCAACGGCGGCTTTAAGGCGGCGGCCGACCAGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGGTCGCTGCTGTGAAAGAGGTAGAGCCGGAAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTCCTGCCCCACCGCGGGTATCGGTTCGGCCTAAAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGATGGCGGTGGAGCACCGGCGCGGCGTTGGGGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTCTCTACTCCAGCCCTGGGCCACGCTCGTGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTACCACTTGGTCCACGGTGGTGGCCAGCAGCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CACGAGCAGGGGCAACAGATTGGTGGCGGCAGTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGGGCGAAATCCTGGAGGTGCGGCTCCTCTACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTGGCCGGCGTCGGCGGCTATATCTGCGTGCAGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TGAGAATCTTTTCGCTCAGGCCACTCTTGATTTTCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGCTGATTAACTCCTGGGGGCCCTCGTTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGGAGCAACTGCTTATCCTGAACCCGGATGATTTTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGTTGGTTTGGGGGTTGCCATAAGTGGGCGGTGGTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTAGCTGCTTTGCTGGCCACGTAGGCGCTGAAAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TACGACGAGCTGAAGCGCCACAAAATCACGCTCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAATTACGAGCGGCACCTTTACGATGGACCCGACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTACGACCAGCGTAGCCGGCGGTACCGTCCTGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAGACGTCCGGAGCGGTTAGCTGCTGGCCCTTCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCGTGAGCCGGGTGATGATGATGTTGGAGCCCAGCAG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGTCGAACCCCGCCTGGACCCCGGCCCAGGCCCACC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCAGCGTGGCCGCGCCGTAGAAGATGACTTCCACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGTCCTGCACGATGGTCACCGGGCCGCGCTGCACGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CATAGTGCTTGGCGGCCAGCGCGGCTACTTGTGCGTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATTGTTGTCTTGGTCCATAGAGGAATCGTCTGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATATACCTGTCCTGCCTGTTCTGCTAATGTCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAATCTCCCTACGGCGAATCTGTGCCGTGCCTAGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGGGATGAGTACGAGGCTCGGTTTATTTACTTGTCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTTCAATGGCCCTTAGGCGGGTGGCATAGAGCTTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAACAAAACCAAGTCGGTGATTGAGGATGCTACGGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCCACCGTGAGACTGGTAACGGCCCCTTGCTCCTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGTGGCTGGAGGCAATGGGTCTGCTCAATGATGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACCCAGTGGCGTAGCGAGGTGAGGGTAGGTAGCTA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCAAGAATGAGCGCGGCCACAACACCGTCGAAAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCTCGGCGGATTGCGGGGATTGGGGTAGGGGATACAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGCCCGTGCCGTTGCCGGTTATCTCAATGGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GAATTACAAAAGTCTCGCGGCGCAACCTACAATATT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGAGGCCAGCAACGTTTTCACCAACAATCCAACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTGAAACGCTCCTCTTCGTCCATTGCGCTCCAACCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	AAAAAATGCTTATTACTGTATTTCAGCAACTTAGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTAAGACGCCAAGGACGCGAGGAAGTGTTCACGCGAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTCGTCTCAATTGCGCAACTGGTTGGCCTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TAGTCGTGTGTCGGGTTGCCCCCCGTCCAGTAATACG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CCTACGTTGCGCACGTGCGCTGTGGTTACCTCGTCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGCGGTGCTGGTTCCATTTTACGAGAAGGTAACCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAACATGGCAAATTTCTCGAATTATGGCCCTTCG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGACCAGTAATTTCTACGACCCCACGCAGCCCGAA
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCAATTGCAACAGGTGGAAGCCTTTCAAGCCCTGT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCATAGCTGCGCCCAAAAGTCGGCCAGCGTCAACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCGGGTTGCCAGTATAGCAGTAGGGGCCAACACT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCCATCAGCAACAGCGTTGCAAGAAGCATACTGAGCGG
ATTTCAATTCCACCTGGTCCGATTGAAGC	AACAAGCTGCGCCTCACCGACATGCTGGCCTTCGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCCGCCCCTCGGCGCTACTGATTCGACCACTACGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCGGCGTGGGCTTCGGGGTTGAGAGGTTCCATAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGTTGGAGTGACTCCTGTGCAACATTTTTTAGCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GACGCCGACCCTGGCCAGCGCGGTGATGCCTTTGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCTGGAGGCGGTGCAGATTGTCCACCCAGCGCTCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTCCAGCACCGTGCGCAGGTAGAGCATCGGCACCAC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GCGCGAAACGGGCACCATCGCCGGGCTGGCGTAGTC
ATTTCAATTCCACCTGGTCCGATTGAAGC	CTGGCACCGTAATAATCCACTGCTTCGGCGCTGGCCA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAAGTATTCCCTTGGTGCCGACCGCTTTGCCACGAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGTAGCCCGTTAGCACCGCTTCGCGCAGCGCCTGCGA
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGCGTGGGCGCCAGGCTCACGAGGGGGCTGAATGCC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TCGTTGAGGCCCGTAAAGAGTCGCGCTAGCACGGTG
ATTTCAATTCCACCTGGTCCGATTGAAGC	CGGCAATGGTACCCTGCTTGGCCTTCTCCGCTTCCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	CAGGCTCTTGGCCTGCGCCAAGGTATCGAGTGTCAT
ATTTCAATTCCACCTGGTCCGATTGAAGC	AGCGCCTGCTGGCTGGCCTGGTCCGTGCGGTTCTT
ATTTCAATTCCACCTGGTCCGATTGAAGC	GGGGTAGGACTCATGGGCGACGAACGGGTTTGCGCT
ATTTCAATTCCACCTGGTCCGATTGAAGC	ACCGCGTCGTCGATGGTCTGGGTATCGAGGTGCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	TTGCCGAACTCGATGGCCTTGAAAATTAGCTCCAGC
ATTTCAATTCCACCTGGTCCGATTGAAGC	GTAAGCCTGCTCGTGGTGGCTACCATGATATGCCGT
ATTTCAATTCCACCTGGTCCGATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068334173.1\|787129_789811_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP014771.1\|WP_068334162.1\|782227_784840_+\|DUF3494-domain-containing-protein	unknown	unknown	gnl\|CDD\|378786
NZ_CP014771.1\|WP_157550235.1\|779191_779698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068334194.1\|801821_803207_-\|hypothetical-protein	cas8b6	mkCas0111_cas8b6_CAS-I-B	unknown
NZ_CP014771.1\|WP_068334202.1\|806028_806391_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068334179.1\|799063_800074_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP014771.1\|WP_068334177.1\|798773_799037_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP014771.1\|WP_068334165.1\|786566_786923_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133393
NZ_CP014771.1\|WP_068334164.1\|785286_786423_-\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|376794
NZ_CP014771.1\|WP_157550236.1\|805389_805953_-\|hypothetical-protein	cas5	mkCas0069_cas5_CAS-I-B	unknown
NZ_CP014771.1\|WP_068334207.1\|806578_806761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068334163.1\|784933_785158_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068334133.1\|777778_778231_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP014771.1\|WP_068334192.1\|800726_801812_-\|CRISPR-associated-protein-Cas7	cas7	mkCas0088_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP014771.1\|WP_068334190.1\|800157_800661_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP014771.1\|WP_068334158.1\|780416_781220_-\|aminotransferase-class-IV	unknown	unknown	gnl\|CDD\|376449
NZ_CP014771.1\|WP_068334135.1\|778297_779092_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984
NZ_CP014771.1\|WP_068334160.1\|781573_782122_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP014771.1\|WP_071955148.1\|803209_805393_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP014771.1\|WP_082808584.1\|806811_807498_-\|hypothetical-protein	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068334173.1\|787129_789811_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP014771.1\|WP_068334162.1\|782227_784840_+\|DUF3494-domain-containing-protein	gnl\|CDD\|378786	pfam11999, DUF3494, Protein of unknown function (DUF3494). This family of proteins is functionally uncharacterized. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 243 to 678 amino acids in length. This protein has a single completely conserved residue G that may be functionally important.	8.04562e-29
NZ_CP014771.1\|WP_068334135.1\|778297_779092_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0
NZ_CP014771.1\|WP_082808584.1\|806811_807498_-\|hypothetical-protein	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.71744e-14
NZ_CP014771.1\|WP_068334179.1\|799063_800074_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.00393e-161
NZ_CP014771.1\|WP_068334177.1\|798773_799037_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.04636e-26
NZ_CP014771.1\|WP_068334165.1\|786566_786923_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133393	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators. Putative helix-turn-helix (HTH) MlrA-like transcription regulators (subgroup 2), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	8.35118e-33
NZ_CP014771.1\|WP_068334164.1\|785286_786423_-\|DNA-protecting-protein-DprA	gnl\|CDD\|376794	pfam02481, DNA_processg_A, DNA recombination-mediator protein A. The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.	5.33117e-96
NZ_CP014771.1\|WP_068334133.1\|777778_778231_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	1.57479e-16
NZ_CP014771.1\|WP_068334192.1\|800726_801812_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	1.41831e-05
NZ_CP014771.1\|WP_068334190.1\|800157_800661_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.80308e-58
NZ_CP014771.1\|WP_068334158.1\|780416_781220_-\|aminotransferase-class-IV	gnl\|CDD\|376449	pfam01063, Aminotran_4, Amino-transferase class IV. The D-amino acid transferases (D-AAT) are required by bacteria to catalyze the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity.	6.5199e-40
NZ_CP014771.1\|WP_068334160.1\|781573_782122_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.10538e-15
NZ_CP014771.1\|WP_071955148.1\|803209_805393_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	7.14403e-62

>NZ_CP014771.1|WP_068334173.1|787129_789811_+|alanine--tRNA-ligase
MSLPTAAHVRQQFLDFFASKGHHIVPSAPLVVKDDPTLLFINSGMAPFKDYFLGNKAAPYKRIADTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKDAINWAWELLTDVFKLEKDRLYVTYFAGDAADGTGPDTETQALWRQYTTDDRILPGNKKDNFWEMGDTGPCGPCTEIHIDLRSDEERAAKSGRELVNADHPQVVEVWNNVFMEFQRLADKSLIPLPAQSVDTGMGFERLMMAVSGVKSNYDTDVFQPLIQFIAQEAGVVYHGTSPATVTDLPATEEEKIDIAIRVLADHIRAIAFTIADGQLPSNVKAGYVIRRILRRAVRYAFSSLNQKQPFLYKLVPVLADQMAGIFPELKAQQAFVTRVIEEEEIAFLKTLETGLRRLDALEESARANGNVIDGRTAFELSDTFGFPLDLTALIAREKGLTVDEEGFQAALAEQKNRSRNAQETEQSDWVTVTEHDAPNEFVGYDHDEATARLLRYRKIDKKGKTEYQLVLDQTPFYAESGGQIGDTGYLESDFDKLRVIDTKKENDLIIHTTLSLPLELTAALRARPDVARRTLIRNNHTATHLLQAALRQVLGSHVQQKGSLVNEKLLRFDFSHFTKVTEAQLREIEGVVNARIRQQIPLVERRNVPIAEAKKLGAMALFGEKYGEFVRVITFDKEYSVELCGGLHVANTGSIGYFKITTESAVGAGVRRIEAVTAGAAEAFVDQQLDLLGQVREALGNPQHLLTSLEKQTDEIAALRKQIEQFGQQQINQQKAQLVGQVKDLGSVKFLAAQVQASSADDLKKLAYELRQAVSSLVLVLGADLDGKPQLAVMLDDNIAKAGKLNATTLVRDLAKDIQGGGGGQPFFATAGGKNAAGLATALGRAEALVAAGV
>NZ_CP014771.1|WP_068334165.1|786566_786923_-|MerR-family-transcriptional-regulator
MPYKERDITKQYFTIGEVAEQFGVATSLIRFWETEFDELAPRKSKKGNRLFTQADVDIFRTIYHLVKERGYTIAGAREMLKQKGGQLKDKIDVIQSLEKVRGFLVNLKKEIDAAQKGE
>NZ_CP014771.1|WP_068334164.1|785286_786423_-|DNA-protecting-protein-DprA
MPSSTTDDLYHELALTLLPGIGPQLTRQLMSYGSSAKNVFSLPPGRLRRIPGVGEATLKILTGPARGQALTQAEASLRKAEKEGVAILFYTSKQFPARLKLIPDAPVLLYYQGPADLNAPKTVAIVGTRQATEYGREQTEALVRGLVPHNPLVISGLAYGIDILAHRAALQEGLATVGVMATGLDVIYPAAHRKTAEKMRETGGLLTEFAFGTQPDRYNFPQRNRVIAGLADGTVVVEAAEKGGALITAELALSYDRDVLAVPGNVSSAASAGCNNLIKANKAALYSQPADLEQLLNWDAALFQSGKFQPTPSYSPDDFTAEEFALVGVLAAAPGRELHIDELAWRAQQPIHTVAALLLTLEFGGVVRALPGKKFGLV
>NZ_CP014771.1|WP_068334163.1|784933_785158_+|hypothetical-protein
MKKYTIASAVATVAVCLLGAATPALAQAGAPGSGGPTPTGPSPTQVPIDGGASLLLASGVAFGLKKLRDRRRAR
>NZ_CP014771.1|WP_068334162.1|782227_784840_+|DUF3494-domain-containing-protein
MKVFLLFISTAAVLLHAPQAAWGQAAPPLGAAASFALFTAVGEIKNAGPTIVNGNIGTNAGAFTGFPPGVVNNGSIYVATTYSTQAATDVQTAYQYFSDHIPCATPLAIYGGTPAVTLIPGSYCVSGATTLAGTLILDAGGVANAKFYLRVIGGALTTAANSTVVLAGGATADNVYWQISGGAVNLGQNSTMQGTLLVDGAISMDEGTTLVGRGLSRAGAILPTSTPTFISTFSLPVPTSTSWLGTALGGLNTDWYTAANWSNGVPTSVLEAIVPTGTTPYPVIASGSAAAKSLTIGSTASLTQAGGALDVKNAIDNSGTISATGGTVTLTGATAQAIGGSGRTQLWSLTIANGVGATQTGTLSIHGVLALTSGGLNTNGQPLTLLSDAAGTALVVNTNGSVTGPATMQRAIDPTFNAGVGYHHYSSPMVSTTLGDLTTTPGFSPIFNTAYNTAAMPKATTPFPNVFAYDQARVTTSGNPGSQDFDLGFFVPADANTTMTPLVGYDLNIAASSTVDLMGTLNNGPVAISNLNRGTQTQSGWQLLGNPYPSPIDFSQTVGIASTNMDNAVYVYQSTGQYVGQYRSYVNGMGGSPQVAAMQGFFMRATTPNQMASLALTNDSRVTTFATTPSFNRTAADTRPQVRLRLQGSTPLIDEAYVYFEKGATADFDSRFDAYKLPNSSGLSVGSLITSNELSVNGLPPITGSTTVSLNVQVPAVGTYALNALDLLNFDASTQVYLLDNQTGARIDLSKQPLYSFTASATALPGRFVLLFGPNTPLAATPSALAQQVQLFPNPAHGSFTLVVPAELGHGSVSATLYNHLGQVVTKQTLPLTAAGATAQFDVSYLTAGVYTLQLKTGENQVVKRVVVTN
>NZ_CP014771.1|WP_068334160.1|781573_782122_+|helix-turn-helix-transcriptional-regulator
MKLYIKYMVSVRCKMAVQDKLDKLGLHYGTVDLGEIIFKQNITPQQHARLQEELQELDVELLDQHQGKIIGQIKAVIMKMVHHADSLPKMKNSEYLSQQLKRDYTYLANLFSEATGVTIEQSIINHKIERVKELLLYDELNLTEIAHKLNYCSVAHLSGQFKKTTGLTPTFFKQLKHKMRHL
>NZ_CP014771.1|WP_068334158.1|780416_781220_-|aminotransferase-class-IV
MMLFNNDLLPTATLPLPNRGLAFGDGFFETLIFTGGRLRLAAGHLARMQQAAAALYLDLPAALATAEALETTLARLAAANELPAARLRLQLWRAGGGRYAPLTNAAEWLATAEPFVADESALHQVDFAHETTALPSPLSFCKGPQAWLYVRAAHERRQRGLEEIILCDAAGHVAEAGASAVFWLKDSVLYTPALASGCVAGVRRAAVLRAALAAGQACQEGLYQRGALLAADAVFTANVAALRPVRGVGNHQFAAPGAEWLARLSRY
>NZ_CP014771.1|WP_157550235.1|779191_779698_+|hypothetical-protein
MRIRLALLGALLLAAGAAQAQYAAPGFPMLPHRRPLPPTDAPVLRSPVLPRFWHETDPKRQATGRDQFFEFVSAQAQYPEAARPAADQPNVLMPTGRIFVSIQVRPNGSVRQPPRITRRELTEPDAAYPPAAIRALDAEAQRVLGALRFARSPATQDSLVVPMRFIAK
>NZ_CP014771.1|WP_068334135.1|778297_779092_+|thymidylate-synthase
MRQYQALLREILDHGTLKTDRTGTGTRSIFGPQMRFNLAEGFPLVTTKKVHLKSIIHELLWFLQGDTNIAYLKAHGVKIWDEWADEHGNLGPVYGYQWRSWPDGHGGHIDQIAQIINQLKTQPDSRRMVVSAWNVADLPAMKLPACHALFQFYVADGRLSCQLYQRSADVFLGVPFNIASYALLTLMVAQVTGLQPGEFIWTGGDTHLYSNHLEQARQQLERAPRPLPTMRLNPAVTDIFGFQYADFQLENYDPWPAIKAPVAV
>NZ_CP014771.1|WP_068334133.1|777778_778231_+|ankyrin-repeat-domain-containing-protein
MKKAILFLATLVCFAFATHAQTPSKELTTAVMKNNAAAAETLLAAGANPNAAVEIVPGFPTTYLITAATNGSLDLVKLLLKYKAQVNQPDGFKATALMAAAGKGNKAIVALLLASGADAQAKDDEGKDALALAKEAGSPETAALLAQKLK
>NZ_CP014771.1|WP_068334177.1|798773_799037_-|CRISPR-associated-endonuclease-Cas2
MYVILVYDMKQQRVGRMLKLCRRYLHWIQNSVFEGEISEVKLAELLAKARTILKEDEDSVILFKSRTQQWLEKQVVGRERSPLDTIL
>NZ_CP014771.1|WP_068334179.1|799063_800074_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNPGRLSRQDNTLKYTAYDEAGAEGQTRFLPIEDVADLYVFGSLDANSALYNFLGKHGVSVHFFDYYEHYTGSFMAKEYLLAGRLQVAQTGHYVSLPKRLVLARKLVEGAAFNLLKNLRYYQSRGRVVAEEIAQIELYVAALPHTTTITEIMGYEGNIRQTYYRCFEQLVRVPGFTFDKRSTQPPQNELNALLSFGNMLCYAACLSQIYHTQLNPTISFLHEPGSRRFSLALDLAEIFKPLLVDRTIFRLLNKKEIQPRDFVRELDGCLLKETGRKTFVRVFEERLKETIQHRRLNRTVSYQHLIKLECYKLTKHLLAMEEYQPFKAWW
>NZ_CP014771.1|WP_068334190.1|800157_800661_-|CRISPR-associated-protein-Cas4
MRITGKHVNYYHICHRKLWLFHHGISFQQTHENVADGTLLHQTAYPQRAQRYREIQIEGIKIDFYDPVARVVHEIKRSNKLEAASVAQLQFYLLTLERHGVVEPTGLLEYPKIRRVEKVGLTDADRAAIAEWEVAIEQLVAQETCPPVINKPFCKNCSYYDFCYSGE
>NZ_CP014771.1|WP_068334192.1|800726_801812_-|CRISPR-associated-protein-Cas7
MKPYIYLRGLRHAEHTVFSVQDGQKYYRDPQFGTDQAYSSGQQVKRSVLDALTTELNVLPAPITFNWQVKKGKKPEDVQFEQKEPWSPCDPAHVDQLVGGYMRAETGEITIKRRSPLSISAMRPLHPLLGGLERQEENLSFDRTSHPAHHPVRVRDEKGVELSAEELSDLLTKTNRTLPNRKWIPGQTRASGLFVYDVCVDLRTLFCVSTNTQEPELHPSKIISLREQGWLETSNVFGPCLLAPRAQRERYIPALAHALLNWRITSNQARTFSLMETLAVAISDNANHLAGAIRGQLKEETERPAAKPILDKSAGANLYVAVTAAGYVPGEYGSVNALEQAEQDLIERLRAFDYENQQVPA
>NZ_CP014771.1|WP_068334194.1|801821_803207_-|hypothetical-protein
MYTSYIGQRLLALYNQRQPTDSQLTARQFFEQQLYPLFFEPSKYLQWVPNSPFAQAVAKGDLVPGGPSAAEIRLAKLHRNIETVAPDASFVIGFPAAGVEGTTSGQVSNVGPVVSGDEIYCSWIGGALGVGVSGGLSLLLDQDDVLWTLYEGWAHYRQFLNERPTLKGNQIDTWNGQWLAHAFGEQFDPDYPLDELDIKLTDTAGTLSMPTREWVQVLFALARQYPAQTLMAYVYSLAQTNRTIGFVPLRLGAINKVRDLHDKLFLFPTNLQSAGEDQLLRLYTTQFSFGRACQQGAIGLAAIEPAKLREYLTGPQGKPKALTAKTEESAIQFAFYQIWIIAMLNNQELYDAADQLAATLHAFTDRQREESRDGKRGKTTTSQQLEQVFVKHRPAFFEKLTELLKEVKAQEPYRSVFDDVVRRALLMPVDNFPLFIILTRFRYVARQSGAEATTSSEISPA
>NZ_CP014771.1|WP_071955148.1|803209_805393_-|CRISPR-associated-helicase/endonuclease-Cas3
MMSAPIIWAKSASHGGALSLRDHTWHVMEVVAAIANATQGDERLAVLGAAMHDLGKAHPAFQKKLTMGKKPPPDPNQILHRHELSSLGFLPLLPRADWPAVVDMVVAHHKPMQQPADMFGKGILDLEGRSRTWAADHLADWETWSPLALAVLEELGITTRPIDRGEAAEALQFAVVHCAAKRKGWSAERGLLMAADHFASALQHDAAAELKDLFKAPNLSYFGNRKNDLYPLSLLAADQPQRHTLVVASTGAGKTDYLLRRCRGRVFYTLPFQASINAMFQRLRKADQEAPFGGSVRLLHATSQLVESPGKVEELLQPLVGASVKVLTPHQLAAIVFGTPGYEAVMLDVRGADIILDEVHTYSAQAQAMVLEIVDALRRLDCRLHIGTATMPTTLYAELLRRLGGPPEVAEVQLAPAVVASFDRHQVYKIEREADNPAGWPSAPDAILTQAFANGEKVLVICNTVFGAQQQYQRLRELFPKVVNRLLLHSRFKRGDRAGREHRLENEFNNSDVPGPCLVVSTQVVEVSLDISFDRMITEAAPLDALVQRFGRVNRRRTKDTIGKFKPVHVLAPGPSYLPYKAEIIKASFAQLPDHGAVLHEQELQQKIDVVYPELQISSISTHVIWDGARCKLRELCNNTRSVLVDALEIESSACILTADREKYLAKETPWQERVQLEIPVSWRSMRPHLGKYERLEIGALPFVIPGNKDYQELGLLFDEYDIFLEN
>NZ_CP014771.1|WP_157550236.1|805389_805953_-|hypothetical-protein
MNTVTYTGPFGYLKPWTAVRDGETYSQQFLTPSVMEGMRQKLGVSAILRHKLSYTGLSMQQEQTHPRGWIHEKKKQQLTRPRAILVRGVLLSPTLHLTFATEAEARAAATQHLCLCRNEDIVLPGEPQVLSEAEFDTLPGFELRFVEEPGVETFLVGYNRFSKPQPGAPMYGRLEITGNPIRPLGLQ
>NZ_CP014771.1|WP_068334202.1|806028_806391_-|hypothetical-protein
MMPVYRVKNSLNLLHARHQFAGKNALFFLQTGSVEVMGVDETWDLRHGSSLVKSEKVGLSLATSAADELIPCGPIEKKAQMAVHITIQRCQVDRAATAKVEGKLILTNFPSYTPIVITWG
>NZ_CP014771.1|WP_068334207.1|806578_806761_+|hypothetical-protein
MSDKLRIPFALPTYTNSNFPNPFQGPGAEDAWRRLRASRGNVVTREEMMRRVQEQAAKKK
>NZ_CP014771.1|WP_082808584.1|806811_807498_-|hypothetical-protein
MLSSPAVRLHLYLTASQVVLFDYLPTLKSSFHRWAGHDEGLHDGLSLYSYAWLRGGRAGRGGIRFAEGASWFISAPDETLIHALVAGVVRAPDLGLGLRVADVRLQRAPEFAAGEQPFRVASPVFIKHETERGKPADHLLPGHPRADELLTATLRHKLRQAGLDDAGAAVRFDPTFIAAAKTKLFKYQQVQCRASVCPVLVAGSAEQIGFAWEVGVGHSTGIGCGALV

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Crispr_ID: NZ_CP014771_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_2

1183549-1183642

Orphan

Consensus_repeat	Method
GCAAATTACTTACCCGGTAGAGATACTACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_2

>merge|NZ_CP014771|2|1183549-1183642|CRISPRCasFinder
GCAAATTACTTACCCGGTAGAGATACTACCCCTACCCCCCGCCCGTGCGGGATGTGCAGGCGGCGCAAATTACTTACCCGGTAGAGATACTACC

>NZ_CP014771|2|2|1183549-1183642|CRISPRCasFinder
GCAAATTACTTACCCGGTAGAGATACTACC	CCTACCCCCCGCCCGTGCGGGATGTGCAGGCGGC
GCAAATTACTTACCCGGTAGAGATACTACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068335125.1\|1183786_1185862_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_CP014771.1\|WP_082808610.1\|1191855_1192332_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372648
NZ_CP014771.1\|WP_068335112.1\|1179237_1179492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335116.1\|1179646_1179880_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335141.1\|1190794_1191658_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP014771.1\|WP_068335102.1\|1175758_1177945_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|366374
NZ_CP014771.1\|WP_157550269.1\|1171690_1173424_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335136.1\|1189259_1189532_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178629
NZ_CP014771.1\|WP_068335095.1\|1173414_1173996_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372639
NZ_CP014771.1\|WP_157550271.1\|1192310_1192709_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335108.1\|1178897_1179245_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_157550270.1\|1189571_1189721_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_082808982.1\|1189772_1190621_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213023
NZ_CP014771.1\|WP_068335119.1\|1180040_1182056_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP014771.1\|WP_068335131.1\|1186033_1187350_-\|xylose-isomerase	unknown	unknown	gnl\|CDD\|235487
NZ_CP014771.1\|WP_068335134.1\|1187647_1189153_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|198376
NZ_CP014771.1\|WP_082808981.1\|1178163_1178718_-\|cytochrome-c-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|224758
NZ_CP014771.1\|WP_082808611.1\|1192803_1193169_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372651
NZ_CP014771.1\|WP_068335122.1\|1182148_1183351_-\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP014771.1\|WP_082808609.1\|1174222_1175698_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143475

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068335125.1\|1183786_1185862_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_CP014771.1\|WP_082808610.1\|1191855_1192332_-\|hypothetical-protein	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.45776e-05
NZ_CP014771.1\|WP_068335141.1\|1190794_1191658_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	3.63783e-127
NZ_CP014771.1\|WP_068335102.1\|1175758_1177945_+\|S9-family-peptidase	gnl\|CDD\|366374	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region. This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.	1.87297e-88
NZ_CP014771.1\|WP_068335136.1\|1189259_1189532_-\|hypothetical-protein	gnl\|CDD\|178629	PLN03080, PLN03080, Probable beta-xylosidase; Provisional.	1.98136e-10
NZ_CP014771.1\|WP_068335095.1\|1173414_1173996_+\|hypothetical-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	2.77129e-13
NZ_CP014771.1\|WP_082808982.1\|1189772_1190621_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	8.83073e-39
NZ_CP014771.1\|WP_068335119.1\|1180040_1182056_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP014771.1\|WP_068335131.1\|1186033_1187350_-\|xylose-isomerase	gnl\|CDD\|235487	PRK05474, PRK05474, xylose isomerase; Provisional.	0
NZ_CP014771.1\|WP_068335134.1\|1187647_1189153_-\|carbohydrate-kinase	gnl\|CDD\|198376	cd07810, FGGY_D-XK_2, D-xylulose kinases, subgroup 2; members of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17). They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_CP014771.1\|WP_082808981.1\|1178163_1178718_-\|cytochrome-c-oxidase-subunit-III	gnl\|CDD\|224758	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].	1.44967e-19
NZ_CP014771.1\|WP_082808611.1\|1192803_1193169_-\|hypothetical-protein	gnl\|CDD\|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	5.76737e-22
NZ_CP014771.1\|WP_068335122.1\|1182148_1183351_-\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	2.80798e-149
NZ_CP014771.1\|WP_082808609.1\|1174222_1175698_+\|hypothetical-protein	gnl\|CDD\|143475	cd06567, Peptidase_S41, C-terminal processing peptidase family S41. Peptidase family S41 (C-terminal processing peptidase or CTPase family) contains very different subfamilies; it includes photosystem II D1 C-terminal processing protease (CTPase), interphotoreceptor retinoid-binding protein IRBP and tricorn protease (TRI). CTPase and TRI both contain the PDZ domain while IRBP, although being very similar to the tail-specific protease domain, lacks the PDZ insertion domain and hydrolytic activity. These serine proteases have distinctly different active sites: in CTPase, the active site consists of a serine/lysine catalytic dyad while in tricorn core protease, it is a tetrad (serine, histidine, serine, glutamate). CPases with different substrate specificities in different species include processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein; and others such as tricorn protease (TRI) act as a carboxypeptidase, involved in the degradation of proteasomal products. CTPase homolog IRBP, secreted by photoreceptors into the interphotoreceptor matrix, having arisen in the early evolution of the vertebrate eye, promotes the release of all-trans retinol from photoreceptors and facilitates its delivery to the retinal pigment epithelium.	3.82969e-23

>NZ_CP014771.1|WP_068335122.1|1182148_1183351_-|lactonase-family-protein
MSKPFASRFFLAPFAGLALATCLSGCAGTSPGAGTKADRSYLVYVGTNVSGDQASTIYLYRLHSATGALTPVSVQHGGSQPSYLTMDASLHHLYAVSETGTFQGRTNSGGVSAFAVNASTGALTLLDQQPSLGASPCYISLDHTGRNALVANYVGGNVALLPLRADGQLAPPAATDQHEPPLGPHKNQSHAHAHCFIPDPANRYAFAVDLGTDKVYGYQLDAAGGQLRPLPTPAFVAKPGAGPRHLTFHPNGRWAYLENELNSTVTALAYDAATGTFREIQTLSTLPEGFTGENSGADVHVSPDGRFLYTSNRGDNSLMVYSIVPADGRLTLVQHVSTQGKTPRNFALDPSGRLLLVANQNSDNIFTYRVDKQSGKLTATGQSVSLPTPMCVAVVPDFTK
>NZ_CP014771.1|WP_068335119.1|1180040_1182056_+|NAD-dependent-DNA-ligase-LigA
MNPQARIQALAQRLHHLNQQYYQHDISEVSDQEFDQLLTELNQLEQAHPDLAQPNSPTQRVGGTVTKQFAQATHRYPMLSLGNTYSEDDLREFDERVQKGLEGAPYSYVCEQKFDGVAMSLAYEGGNLHQGVTRGDGTRGDVVTANVRTIRTLPLHLAGNFPAEAEVRGEVFMPNQVFNDLNQEREQNGEALLANPRNAASGALKLQDSSQVAARRLRFYAYSVLTPGRHFASHSESLEAATAWGLPVSPTWRRCANLQEVLDYIHEWEQKRFTLPVNTDGIVIKVDNLRQQDQLGLTAKSPRWAIAYKYPTAAARTRLREIIYNVGRTGAVTPVALLDPVALAGTVVKRATLHNANQIAALDLRLGDLVFVEKGGEIIPKITGVDLSARPIHAVPIEYPLACPACGTILERPEDEVHFRCPNERGCPPQLKARLEHFVSRKALNIDGLGAETVGRLFDSALIQTPADIYDLVMRKGELIRVERLGEKSIDNMLAGIEQSKQVPFSRVLFGLGIRYVGETVAQKLADYYRNIDTLMDAAKAGAISTVPEVGGVIAVAAMHWFEQPYNLEQIERLRASGVQLAASGEPPLAASDRLAGLTFVLSGVFENYSREQLQTLITSNGGKITGSISKKLSYLVAGDNMGPAKREKAVGFKVPIISENELLALLPVSE
>NZ_CP014771.1|WP_068335116.1|1179646_1179880_+|hypothetical-protein
MKFFLWFAAATILFLLVARFKPQAPAEPIIPTGAKEAQGRTGEENAPPARTEQQGERDAQKAGSTYVLPGLRLSSVA
>NZ_CP014771.1|WP_068335112.1|1179237_1179492_-|hypothetical-protein
MPDQSATSWADTAASLLTKLSGGVELNLNFDQVELQVPNQANPAGLPATWKLNGALRIRTRSEAPVASAAPIVSPLPDPNAPRG
>NZ_CP014771.1|WP_068335108.1|1178897_1179245_-|hypothetical-protein
MASAIEVEARLTLTWPGGHEIQLAAAGSYLILNVPSQQVLDLITSGPPQPPGTPKPPKKPGPDPLAQIHHLARRLGLVLDLRVAGKTYVTFGLPDRSGPKITLNAVLGKIGSFFK
>NZ_CP014771.1|WP_082808981.1|1178163_1178718_-|cytochrome-c-oxidase-subunit-III
MLLYLALVGITMLFVTLVAMYVASRAQSGVPTGLHPFPRYFSLSTIVLLVSSYVLAQAPRLYRADDLNALVRCLGATLLLGCIFSGLQVQGWRELVQQGVLFTGERSGTFVYVISGLHVAHIVAGLIFLLVNMLRTLHASRDSVRTLVFIRNPYHLRQLRALLTYWHFIDVLWLGLFGMFLFLY
>NZ_CP014771.1|WP_068335102.1|1175758_1177945_+|S9-family-peptidase
MNYPSLPLLSPVACLVGAALLLTVATAARAQVGPGTQWTKDGYGYYQVRQDEIVRLDARKAGPPVVLLNKEQLTPAGATAPLTVRRFSLSDDGKQVLLNTNTRKVWRYDTRGDYWVYNLTTRQLAQLGHGRPESSLMFAKFAPDGRKVAYVSEHNLYVENLADHAITQLTQDGTDRLINGTFDWVYEEELDCRDGFRWSPDGQRLAYWQLDATKTRNYLMLNTTAQLYPYTVAVEYPVVGEDPSRCRVGVVPVAGGPTRWMDIPGDAVQHYLPRMEWADNGELILQQLNRRQNESNIIVANAATGAARPIFSETDKAWIDAKDGAVGWNWVDKGKSFVWSSEKDGWRHLYAIDRAGHERLLTPGSYDVISVENIDEAGGKIYFMASPTNATQTYLYQVPLKGGKATRVTPANEAGTNSYDISPNGKIALHTYSSAASYPATDVVSLPAHQRLSSGEAPAPARAMKLPKTEFFQVKTADGVTLDGWMVKPTNFDPSKKYPIVFYVYGEPASQTVVDRFGTGANRLYQGNMADDGYIYASLDNRGAPAPRGREFRKAIYHNIGSLNIRDQALGAKEVLKNSFVDTSRVAVWGWSGGGSSTLNLLFQYPQIYKTGISIAAVDNQLNYDNIYQERYMGLLPEDRRFFVDNSPLAHAKDLRGNLLLIHGTGDDNVHYNNAEQMINELVKDGKTFQMMSYPNRTHSISEGEGTSRHLSATYTKFLKENCPPGGR
>NZ_CP014771.1|WP_082808609.1|1174222_1175698_+|hypothetical-protein
MRNVLFLLAGLLSSGTADAQAFAQPPADAPVVYSVPQLRADLTFLRQALEEVHPGLYCYTPKDSLDQAFARAAAQLTQPLDEPAFWRILQPLAVRVRCGHTRVQHSATYRAWARRQPHYYFPFTVAVRQDRLFVAENQSADPSLRPGTELLAIEGHSAREVLPRLRALISADGYGTGFQDKELEAGFFDDYYATLYEAKPTYRLTVRDSTGQVRELIPLPRPALSLGASAASQPVAPLPAAQVAARRLARLHSVEYPANLPATAILRLRSFDYEADYQAFHAAFFTELARRRTKRLVIDLRGNPGGSNALAVDLLKYLLPSAFVLTKSARARVVLPSFMSADSGSRAYFDTTQVRRLPDGTLTQASAAVGRQLPYQQHRFRGQVVLLVDGGTFSAASSFAASLRAQRRVLIVGQETGGTEAGLNGGVISRVELPQTRMVLQLPHFRLLTACRAPHLGRGVRPDVEVVPTPRQAATHADAILSQLPALLRCL
>NZ_CP014771.1|WP_068335095.1|1173414_1173996_+|hypothetical-protein
MPLIRLPLGQPYSATLAGFDADTDVLTLSAAGQGFDLAAAGMRFVVAASPAGRASATFEWLPGCDAASVVGGQPQPLTVTFQLQEATCRPQPQTRTVRFEVVNPDSSAFTPPNIILPTGSNQANRVLTMSNLPADFCDARFAGIKIFSRWGRLVYESADRNFSWAGEGTAGTYYYLLTYTTGRRYKGWVEVMQ
>NZ_CP014771.1|WP_157550269.1|1171690_1173424_+|hypothetical-protein
MMKTYYCRLLSWGCLLPRAGRRVLAALLLGLLAAPAARATHIVGGEMDLQYLSGNTYQLTMNLYFDAVNGAPGALDASLTAGIFDKATNRQLASVNLPLVSNTFVSYTIPACAIGALSTKALVYRNTIELPPGTYNGSQGYYAAVERCCRNISISNIVAPQDAAQTFYLEFPAVVRGGQTFRDSTPRVFPPVSDYACLGELFTYDFAGQDADGDSLAYDMVTPLNGHATAVNPIPNVSSAPYTEVIWQSGRSQASQIPGAPALGIGARTGRLTVRPSATGLFVFGVRCQEFRQGVKIGETRRDFQIFVTTCPKNNPPSLLLLPSPSGNVAYRPGRDTLRIVPGGAHCVRLRFTDPDPNSRLTLSLRNVDYAGALPTFTTAIVGTVRTAGQPDTLVASLCFTDCVNTRGKVAHIDVLVADNGCSLPKHDTVHVAFIGMPPPNAPPTLTSTAGPTLPLHVRPGQTLAFDLIGTDVESDPILFTLGGSPGFAPAALGAVLVPQAQVGPVRRARFTWPVDCRAITTPPGQVQQLLFTASSTTPCGDTQLSAPLNIPVIVDYSNTPPVLTTSLPPPTAPSCR
>NZ_CP014771.1|WP_068335125.1|1183786_1185862_-|transketolase
MSNPQVSIDELSVNTIRLLSVDMVQKANSGHPGLPLGCAPMAYVLWSRFLRFNPQDPKWPNRDRFVLSAGHGSALLYSLLHLYGYDLTIDDLKQFRQLDSKTPGHPESHITPGVEVTTGPLGQGFANGLGMAMSESHLGAMYNKEGHAPVQDHYTYVLVSDGDLMEGIASEAASLAGHLQLNKMIYLYDDNKISLDGPTSFAYTENPMKRFDAYYWHTQHVQDGNSLDEIENAIRVAQSVKDRPSIIAVRTIIGFGSPLAGTSRAHGSPLGVDNVKATKKFYGFDPEQSFQVPQEVYDHLREPGKKGAELQKQWETDFANYAAAFKEEADMFKLSFDGKLPEGWDKNLPVYTPADGELATRQASGKALDAIKKTVPFMFGGSADLASSNEMDKSGDDSFQPLHRERSNVWFGVREHAMGAAMNGIAHHGGLRTYGGTFLTFSDYMRAAIRLTALAESTATFVFTHDSIGLGEDGPTHQPVEQVLALRSIPNIVVLRPADANESTEAWRIAMTTPKSPVVLVFSRQKLPILDQTKFGSAREGVAKGAYILSEAEGGQPQLILIATGSEVKLAMGAQIELQKAGTPTRVVSFPSWELFEHQDKAYREQVFPPAIKKRLAIEAGSPIGWHKYTTDEGGIIAMNRFGASAPAEELFEKFGFTVENVVKRAQGVLAGHPEDQGQEEEKKQIVAKGN
>NZ_CP014771.1|WP_068335131.1|1186033_1187350_-|xylose-isomerase
MATSEYFKGINKINYEGRESDNPLAFKWYDAGRVVAGKTMKDHLRFATAYWHTFVGTGGDPFGPGTKKFAWDSKGDIVGRAKDKADAAFEFFTKLGTPYYCFHDTDLVEEGSSLREYESNLATLVDYAKQQQQETGVKLLWGTANVFANPRYMNGASTNPDFAVVAYAGTQVKNSIDATIALGGEGYTFWGGREGYMTLLNTDMKREQAHLGQFLSIARDYARKQGFTGKFFIEPKPAEPTKHQYDFDAATVIGFLRAHGLENDFMLNLEVNHATLAGHTFQHELQVAADADLLGSIDANRGDNQNGWDTDQFPNNINELTESMLIILEHGGISPGGINFDAKTRRNSTDLEDIFVAHIAGMDTFARALVTADAILEKSAYKKFRADRYASFDSGKGADFAKGSLTLEDLRKIAHESGEPTPRSGKQEWLESIINQYI
>NZ_CP014771.1|WP_068335134.1|1187647_1189153_-|carbohydrate-kinase
MKYLLGYDIGSSSIKASLLDIATGRCVAAATSPGTEMEMAAPRPGWAEQDPARWWQEVINATKKLQASCPFDPALLAGIGITYQMHGLVLLDKAGHVLRPAIIWCDSRAVAIGNQAFIELGEDFCLENFLNSPGNFTASKLKWVRENEPEIYARIHKIQLPGDYLAYQLTGRMQTTVSGLSEGIFWNFKRQAIAQELLDYYGISADLLPEVVDTFSVQGHLTAEAAQALGLAAGTPISYRAGDQPNNAFSLNVLNAGEVAATAGTSGVVYGINETATADPRSRVNSFVHVNSTPEQPKNGVLMCLNGTGILNSWLRKMVGTISYDQLNALAAQAPVGAGGLLFLPFGNGAERILENRPAAASLHGLQFNSHGQPHLIRAAQEGIVYALNYGLNIMRGAGVRVQTVRAGHANMFLSPVFREAFVNCGNVTLELYDTDAAQGAARGAGIGAGIYASPREAFTGLVRISTEEPTPPLQAQYQEMYSDWQTLLARETRPAAWLLA
>NZ_CP014771.1|WP_068335136.1|1189259_1189532_-|hypothetical-protein
MIVKLKHFLPGLGLLASLNAQARTTPVFRDSKPPLGVRVNDLIKQLTLEEKAQQMLDQSPAIARLGIPAYSWWNEALGAARPASAVLMVK
>NZ_CP014771.1|WP_157550270.1|1189571_1189721_-|hypothetical-protein
MQKTLVIASKAKQSHPNDTCASRSDAIAATLLDAQYARKEKRPLRKFYS
>NZ_CP014771.1|WP_082808982.1|1189772_1190621_-|polysaccharide-deacetylase-family-protein
MPSTAEAAGQAAAAKTNEAAPTSGTAAVAAEEANAKPGPDPSTIPAAKAGDAAAIYARPQVPILCYHQIRDWTARDSKGAKDYIIPIAAFKAQMKMLADSGYHSIQPDQLYAYLTTGAPLPPKPVMLTFDDTDLDQFTIARPTLAQYGYKGVYFVMTVSLGRPHYMTKAMVKQLSDEGNQIGSHTWDHHNVKKYQGQDWVTQIDKPTKTLEEITGKKIKYFAYPFGLWNTQAFPELKQRGFVAAFSLAEKRDHQDPLFTIRRIIASGYWSPRTLHNNMVQSF
>NZ_CP014771.1|WP_068335141.1|1190794_1191658_+|4-hydroxy-tetrahydrodipicolinate-synthase
MNKLHGTGVALVTPLTPTGAVDTNAWLRLLDFTINGGVEYLVINGTTGESPTVTPDEKTDLLQVAREHVAGRVPLVYGIGGNDTAAVARQLRETDLTGVVAILSASPAYNKPSQAGLLAHYQHLADASPLPLLLYNVPGRTGSNLAADTTLRLARHANIIGIKEASGNLEQCLAILASKPADFLFLSGDDMLTLPLIACGGQGIISVMANAFPRKFSDMTRAALASDFARAQQLLYGLVPLNSLMYEEGNPVGVKAALALQGVCGAAVRLPLVAASEGLTARIQALL
>NZ_CP014771.1|WP_082808610.1|1191855_1192332_-|hypothetical-protein
MPRCKLLRGKAYHGRCASKRSWFYGLKVQVVATSDGIPVEFYIHAGAESEQTGQRGLPLDLPTGSVLYTDAGYTDYVAEDLFNEASGSQQQTARRKNSKRPHHPAQSFLLQYFRKGIETCFSQLTARFPKQIHAVTAAGFALKIALFVFAHALHQAGL
>NZ_CP014771.1|WP_157550271.1|1192310_1192709_-|hypothetical-protein
MREQTVAMYCVLDDLIRFSRPAGTLPPATSRRLTDAQVLTTALVAARFFGGNLVVAKHYMEQHWGQNRLDKSGFTRRLHALTDTLLSLFATFGDLLKHVHTEARYVLDSFPVAVCHKMRFKHLGRASRAVSY
>NZ_CP014771.1|WP_082808611.1|1192803_1193169_-|hypothetical-protein
MHLFIGGAGNQYPLHKDIYHTNAWITQLYGEKEFVLFPREQEELLYPEGLGFLSPINILKPDYEKSPKYRAATPLHVVLKPGETIVIPNGIWHTTVAASHNISLIFDQLNRHNFQAWKKDM

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Crispr_ID: NZ_CP014771_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_3

1229623-1229824

Unclear

Consensus_repeat	Method
CGGTCGCCGCCGTAGCTGCTGCCACCGCCTTCGCCACC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP014771_3

>merge|NZ_CP014771|3|1229623-1229824|PILER-CR
CGCCGCCGTAGCTGCTGCCACCGCCTTGGCCACCTTTGTAGCCACCACGCTGGTAACCACCGCCCTGGCTACTACCACCTCGGTCGCCGCCGTAGCTGCTACCGCCACCTTCGCGGCGGTCACCGCCTTTGTAACCGCCACCATAGGAACTGCCGCCTTCACGACGGTCGCCGCCGTAGCTGCTGCCACCGCGGTTGCCACC

>NZ_CP014771|3|2|1229623-1229824|PILER-CR
CGCCGCCGTAGCTGCTGCCACCGCCTTGGCCACCTTTG	TAGCCACCACGCTGGTAACCACCGCCCTGGCTACTACCACCTCGGT
CGCCGCCGTAGCTGCTACCGCCACCTTCGCGGCGGTCA	CCGCCTTTGTAACCGCCACCATAGGAACTGCCGCCTTCACGACGGTCGCC
GCCGTAGCTGCTGCCACCGCGGTTGCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068343083.1\|1222441_1223632_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068343085.1\|1232052_1232250_-\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP014771.1\|WP_068335236.1\|1228866_1229319_+\|PA2169-family-four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|131337
NZ_CP014771.1\|WP_068335226.1\|1227456_1228743_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|272992
NZ_CP014771.1\|WP_068335262.1\|1247674_1248349_+\|DUF2461-domain-containing-protein	unknown	unknown	gnl\|CDD\|378166
NZ_CP014771.1\|WP_157550276.1\|1224866_1225364_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366664
NZ_CP014771.1\|WP_157550275.1\|1224509_1224863_+\|DUF1571-domain-containing-protein	unknown	unknown	gnl\|CDD\|377879
NZ_CP014771.1\|WP_068335199.1\|1223722_1224214_+\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|377712
NZ_CP014771.1\|WP_068335210.1\|1225528_1226401_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187627
NZ_CP014771.1\|WP_068343080.1\|1221537_1222362_+\|GMP-synthase	unknown	unknown	gnl\|CDD\|153212
NZ_CP014771.1\|WP_071955184.1\|1226556_1227417_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187576
NZ_CP014771.1\|WP_068334163.1\|1243254_1243479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335256.1\|1233261_1236873_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237554
NZ_CP014771.1\|WP_068335259.1\|1246731_1247556_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225758
NZ_CP014771.1\|WP_082808615.1\|1243739_1245512_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173809
NZ_CP014771.1\|WP_082808616.1\|1245624_1246620_+\|DUF2179-domain-containing-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP014771.1\|WP_068335253.1\|1232404_1232830_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP014771.1\|WP_068335194.1\|1220362_1221466_+\|carboxylate-amine-ligase	unknown	unknown	gnl\|CDD\|237406
NZ_CP014771.1\|WP_071955188.1\|1239327_1243161_+\|DUF4331-domain-containing-protein	unknown	unknown	gnl\|CDD\|379511
NZ_CP014771.1\|WP_082808984.1\|1237464_1239294_+\|DUF4331-domain-containing-protein	unknown	unknown	gnl\|CDD\|379511

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068343085.1\|1232052_1232250_-\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	5.4316e-22
NZ_CP014771.1\|WP_068335236.1\|1228866_1229319_+\|PA2169-family-four-helix-bundle-protein	gnl\|CDD\|131337	TIGR02284, conserved_hypothetical_protein, conserved hypothetical protein. Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.	1.12159e-29
NZ_CP014771.1\|WP_068335226.1\|1227456_1228743_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	2.99191e-144
NZ_CP014771.1\|WP_068335262.1\|1247674_1248349_+\|DUF2461-domain-containing-protein	gnl\|CDD\|378166	pfam09365, DUF2461, Conserved hypothetical protein (DUF2461). Members of this family are widely (though sparsely) distributed bacterial proteins, about 230 residues in length. All members have a motif RxxRDxRFxxx[DN]KxxY. The function of this protein family is unknown.	7.37539e-60
NZ_CP014771.1\|WP_157550276.1\|1224866_1225364_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|366664	pfam01476, LysM, LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.	0.00253099
NZ_CP014771.1\|WP_157550275.1\|1224509_1224863_+\|DUF1571-domain-containing-protein	gnl\|CDD\|377879	pfam07608, DUF1571, Protein of unknown function (DUF1571). A family of paralogous proteins in Rhodopirellula baltica.	4.15719e-07
NZ_CP014771.1\|WP_068335199.1\|1223722_1224214_+\|DUF1232-domain-containing-protein	gnl\|CDD\|377712	pfam06803, DUF1232, Protein of unknown function (DUF1232). This family represents a conserved region of approximately 60 residues within a number of hypothetical bacterial and archaeal proteins of unknown function.	1.54259e-11
NZ_CP014771.1\|WP_068335210.1\|1225528_1226401_-\|SDR-family-oxidoreductase	gnl\|CDD\|187627	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR. TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.88333e-127
NZ_CP014771.1\|WP_068343080.1\|1221537_1222362_+\|GMP-synthase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	3.15991e-17
NZ_CP014771.1\|WP_071955184.1\|1226556_1227417_+\|NAD(P)H-binding-protein	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.2639e-55
NZ_CP014771.1\|WP_068335256.1\|1233261_1236873_+\|hypothetical-protein	gnl\|CDD\|237554	PRK13909, PRK13909, RecB-like helicase.	4.13003e-43
NZ_CP014771.1\|WP_068335259.1\|1246731_1247556_+\|MOSC-domain-containing-protein	gnl\|CDD\|225758	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only].	4.19706e-63
NZ_CP014771.1\|WP_082808615.1\|1243739_1245512_+\|S8-family-serine-peptidase	gnl\|CDD\|173809	cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins. Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin.. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.79264e-110
NZ_CP014771.1\|WP_082808616.1\|1245624_1246620_+\|DUF2179-domain-containing-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	1.9028e-64
NZ_CP014771.1\|WP_068335253.1\|1232404_1232830_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	6.04685e-24
NZ_CP014771.1\|WP_068335194.1\|1220362_1221466_+\|carboxylate-amine-ligase	gnl\|CDD\|237406	PRK13515, PRK13515, carboxylate-amine ligase; Provisional.	0
NZ_CP014771.1\|WP_071955188.1\|1239327_1243161_+\|DUF4331-domain-containing-protein	gnl\|CDD\|379511	pfam14224, DUF4331, Domain of unknown function (DUF4331). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 223 and 526 amino acids in length. There is a conserved FPY sequence motif.	2.12419e-91
NZ_CP014771.1\|WP_082808984.1\|1237464_1239294_+\|DUF4331-domain-containing-protein	gnl\|CDD\|379511	pfam14224, DUF4331, Domain of unknown function (DUF4331). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 223 and 526 amino acids in length. There is a conserved FPY sequence motif.	9.90088e-105

>NZ_CP014771.1|WP_068335236.1|1228866_1229319_+|PA2169-family-four-helix-bundle-protein
MEAKVTQAALNELITVLKDGQKGYADAMVDVKDAHLKELFKKYSAQRAGYVTELEDQMFKLDLKPDTTEGSSVVGAIHHVWIDLKSAVTGHNNHAILAECERGEDVAKKAYAEASKAQDLPSDLKSIIEKQSAGVLAAHNEIRGLRDSSK
>NZ_CP014771.1|WP_068335226.1|1227456_1228743_+|NAD(P)/FAD-dependent-oxidoreductase
MPLPNDSPTPLPAVAVLGGGAAGFFGAIACAEANPRQLVYLLEKSPKLLSKVRISGGGRCNVTHACESAAQLVQHYPRGGRQLKEAFRQFGVADTIAWFAERGVALKTEADGRMFPTTDSSETIARALEDAARRAGVRVLSRTAADEITALPEGGFSLRLSGEGSAAIGPELRVGRLLVATGGNPKSAAYDWLRALGHSVAEPVPSLFTFNVPTSPLRELPGVSVPHARVVLAGEKLQYEGPLLVTHWGVSGPAVLKLSAWGARRLHELGYHGTALISWVPTYTDDTLRAWTQAFRLDNGKKQVAAHPQFGLPTRLWRTLVAEAGIGAEARWNEVPAKAQNRLLELLLRTPLQVQGKTTHKDEFVTCGGIPLNEVHLATMESRRVPGLHFAGEVLDIDGITGGFNFQAAWTTGFLAGVALAKAGQPVG
>NZ_CP014771.1|WP_071955184.1|1226556_1227417_+|NAD(P)H-binding-protein
MSSTSSTSSAAGPSTVAVVGCGWLGLPLARKLLAQGYRVLGTTTTAEQLPLLAAAGIEPRLLQLGSDFSAADEAELVQWLQQADTLVINIPPRAAVAGGYPQLLRPLHRAVAAARIKSVLFVSTSGVYPDEPRLMHETNAVSTRDAASDVLRTEGHFVPRYGQWLSTVVRLGGLFGPDRPPGRFLAGRRNLPQGDAPTNLLHLTDAVGVLSAIITQNIWGHTFNVCALMHPTRREFYPAAAAYLGMEPPTFQAEGAGGKVIESTLVRSLVPYSFQHDDVLAALPYC
>NZ_CP014771.1|WP_068335210.1|1225528_1226401_-|SDR-family-oxidoreductase
MTNPFAQPMLRDNALAGKTIIVTGGGTGLGRAMTTYFLQLGANVTITSRKLAVLEQTAAELRQQTGGRILALACDVRKYDEVEAMLARTYDEFGRVDVLLNNAAGNFISPTERLSHKAFDVIVDIVLKGSYNCTLAVGKRWIAAQQPGTILNIVTTYASVGSAFVVPSAAAKAGVLALTRSLAVEWAKYGIRSNAIAPGPFPTEGAWSRLFPEPLASQLDPAASVPLKRVGQYQELANLAAYLVSDFSAYINGEVVTIDGGEWLNGAGEFNKLQALTPNMWDQIEKTMRR
>NZ_CP014771.1|WP_157550276.1|1224866_1225364_+|LysM-peptidoglycan-binding-domain-containing-protein
MRKGQHHTVLQAGFGTITDLLSNANGSGSTVFTHSFRYAGDTLAQGQPAYILRSDYPQFQYIAYKAGRNETVHSIANYFGCGEYRIMERNNLEVASKLTEGQVLQVPNSYGRRTILVVNAKTYLPSSVTVYDDRGLYEKYTFLNVVPNQLIATPEFTKDYQGYKL
>NZ_CP014771.1|WP_157550275.1|1224509_1224863_+|DUF1571-domain-containing-protein
MNFRYLVITGFFSAGGVAQAFSREPVEPISTQQLVNRLFSAIQSLKTLRCLVDTQERIGRSYTPGRTLMKLSFSPLKIYIKNQKNVEILYVTGQNNNDAWVYPGAFPYITLSLNPTG
>NZ_CP014771.1|WP_068335199.1|1223722_1224214_+|DUF1232-domain-containing-protein
MTSLKQRGLKISKNAIFNLFINRATKLLGRPFKVVTILNETATKLADEESRDNKFKQLFDVALTLVRLVRSYATGEYRDIKNSTVISGFAVLLYILSPVDLIPDFIPVVGFLDDLSLVSWFMGKFQGEVVRFREWEVRIAQLPVPGSADGDPTLPAVAELGHS
>NZ_CP014771.1|WP_068343083.1|1222441_1223632_+|hypothetical-protein
MIFAPRQLFNSAFTPARYQEMLADISRQLPGQLDFRVAETPVFVPAGLRDKLIKAGQDIIDVLQKPNFKELTDGAIPNGQRVPNEDAHAEFLTFDFAVCRDKAGELEPQLIEMQGFPSLYAFQAYLPGIFSKHFPIDKSVSPFLGVADEAAYLAEVGKLILGDEDPENVILLELFPEQQKTRVDFALTKKFWDIDAVSLPDIIKKGRELFYIKDGREIQIKRIYNRIIFDELARYPNLHPAFSLTDDVDVTWVGHPNWFFRISKYTLPLVKSEYAPASYYLQDLKEYPQDLENYVLKPLFSFAGAGVRLHVTRQDLEAISDKENYLLQRKVTYEPVVQAPDGLIKCEIRLLYIWPHSASQPTLLAGLARLSRGEMIGVDFNKNKDWVGGTTPLFER
>NZ_CP014771.1|WP_068343080.1|1221537_1222362_+|GMP-synthase
MSELKIAILDMYDNFPNEGMRCIRQLLRRASQENQVKFLVDTFNVRGQNELPDLTYDIYISSGGPGSPLPSAEPWEPLYFGFIDALFNFNKQNKRKKHLLLICHSFQLISRHLGLGEVGKRKSTSFGVLPVHLTEAGHADPVFSQLPEPFFAVDSRDYQLIDLHPERLLELGITILGMEKERPHVPLARAVMALRFSNEIMGTQFHPEADGEGMLRYMLTDERKQQVITAYGEEKYHEMVRLLADPNTIEFTGSVIVPAFLRRAVEALREPALV
>NZ_CP014771.1|WP_068335194.1|1220362_1221466_+|carboxylate-amine-ligase
MSQPVFTLGIEEEFQTIDPVTRELRSHMSKIVEDGKITLHEQVKAEMHEAVVEVGTNICKNIQEARQEVKHLRRQVIELADRVGLKIAAAGTHPFSRWQDQPITPDARYDKIVEELQEAARSNLVFGMHVHIGIENRDLGVYMMNALRYFLPHLFALSTNSPFWEGRETGYKSFRTKVFERFPRTGIPDYFTSASEYDEFIALLIKTGCIDNGKKIWWDLRLHPFFDTIEYRICDMMMRSDETIAVAAVMQALVAKIYKLKCQNLNFRLYRSALIKENKWRAARYGIDGQLIDFGTEEEKPARQLILELLDFVDDVLDDLGSRHEVEYVLKMLEMGTGADRQLAVFHQTGDLTKVVDYILSETTHGL
>NZ_CP014771.1|WP_068343085.1|1232052_1232250_-|cold-shock-domain-containing-protein
MPTGTVKFFNETKGFGFIKNDETGQDIFVHVTDLVDAKALQEKDKVQYEEAQGRKGPNAVKVSLL
>NZ_CP014771.1|WP_068335253.1|1232404_1232830_+|acyl-CoA-thioesterase
MDTPAAPTHAYAHLFTVEASDIDQLGHANNVAYVRWVQDVAAAHWHHFFPPTAALPPQVWVIQEHRVRYLRSAYAGDELRASTWVADVKGASSQRLTRIERVADGQLLCAAETQWVLLDAGSGRPVRVPGEWAEILMPSGE
>NZ_CP014771.1|WP_068335256.1|1233261_1236873_+|hypothetical-protein
MPAPFRIYSASAGSGKTYQLTKEYLKLALGYPQPADPSGERLYKADYFKSILAITFTNDAAGEMKERIVGALRRFAQDGGGREDALLTEVAAELAQEGQLPKSLRTPAEWQREVRLRAQATFRLVLYHYADFGVSTIDSFVQRIVTAFTRELGLPATFEVELDTDSVLRSAVAALIDKVNRDADSKLLSQTLADYALGQAEQGRNWNKLPDELLDFGRALFNESVHEAVAQLGQKTMADFRALDQDIRARQRAAEEAVQAQTTHALDLLAAAGIEAEHLASGSGGIYGHFTKWERWLSPPDKDALFPTATARKTIESGKWWSEKGKKAGLVPAIEAAQPALEDAFGELLALREKYLPGYVLLGAVQPFLFHASLLSELNKLVEEISRERNVVLISEFNRRIAAIVLTEPVPFIYERMGEKYRHLLIDEFQDTSVLQWNNLLPLVENAVGNGGLSLAVGDAKQAIYRWRGGELEQILRLYQGDTDALAARAREPAMRRLLNERYQTLQQNLEPHSLAINYRSEPAIIEFNNEFFTYVRERSGEHEVVQGIFEPGFRQQVPPTLTSPPSPLSRGEGELVFSSNSSLETSSPSPRERGLGGEVPAEGDALPGHVELLFTKDDAPARRYAPTPGQYLEAPLPGYLPDSVLDYAESTCYLALQLVEQALADGYHLRDVALLCRTRRQSRLLAKFLKERGFPIISADSLALQFAEVVNLLVAVMRVLHQGSDTLARAEALLLVDRVVRRLPPTPARARHIADVANDTESSRPFFDELRGLGFDVVEKSTGNLGLYELTEKLIGTFGLLGANAESDYLFRFLDLTLEFSLKYGNNLGNFLTHWDERKGVLSINAPGGADAVTITTVHKAKGLAYGVVIVPFADWALVPHAGELLWGRLDAADKPLPELPDVAVVRLNKTLTYTPLADQDAEEREKTLLDGLNTLYVAFTRPRHRLYILSKAPAETRKTTGELPLSPTPLPAAEQGPARDVADLLAGYLRQLGRWQPEATSFVLNPGAPHNPSTRHQAPSINFPLTNLTSTAWPERLQLRRHATTVFDFDEQEKLGELNRKLHYALRRLLSARDLGRTLRQLVTEGLINQQERPALEAGLARLLADPRLAPYFADDLAVETEREILIGGHTQRAYKPDRIVFGPGASRAEQTVTLLDFKLPPPQDIHKIRLRDYARLFRELGYADVRGIVYYFGSGEVVVL
>NZ_CP014771.1|WP_082808984.1|1237464_1239294_+|DUF4331-domain-containing-protein
MKHLLTKPSQWLVAACAVTALSVWGATRYTPLEASSHREAPLIADDPLADNTDVYAFVDPNDATRVVLIADYIPFELPQGGPNYNTFGENIRYEIHVKNKTASNADDITYRFVFTRTNQDGSTFFNVRLGAQNLKTTYTCSKSTDGGNSFTNIVTNGVVPAYNIGPRSINTAVGLNQASYTAYRQGAVTTATGAGGEQVFCGSSDDPFFVDLGAIFDLAGLRPNKGSRDGLAKYNVHSIALSVPITSLQKDGKAASAANTILDPDYVIGVWASASRPTMRTLSSTGGATTDNGTYTQVSRLGMPLLNEAINPIGAKDAWNRAMPGSEAPATDGYLQNPELGLYMADDVPMNGAAPKPAGQTYYGGAVPALTALRIQTKSLAGQALLGGASFAGFDFRDGANGLYGLKGNAVLAGTALAGPYADYLLPGPGQPRSVDIKPIFHTGVPNQAPYQLATGKAGNPLAPGKPFISNFLPVVGDMLRLNMAVPPTPRNSADFSNQGLLAAAVLGLTDPRFNKNATLQNIPNMDGFPNGRRLEDEVVKIELQAVSGAVLAAIGLWYDDYTPSSTSPVTPQLKGVLNFTAGVEKNDTTFRASFPYVQTPWQGFRIRR
>NZ_CP014771.1|WP_071955188.1|1239327_1243161_+|DUF4331-domain-containing-protein
MTPQRLRTYVALPAIAAAAVGLSLWSQTRYTPLEASSHREAPLIADDPVADNTDLYAFVDPNDATKVTIVANYIPFELPQGGPNYSTFGENVRYEIHVKNKTTTTADDITYRFVFTRTNGDPTTFFNIRLGAQNLKTTYTCSKSTDGGATFTDIVTNGVVPANNIGPRSINGGAGLAKANYETDVRESAITTASTGEKMLCGPVDDPFFADLGAIFDLANIRPTNATDGLARKNCHSITMSIPIANLQKDGKALASATTILDPDYVIGVWASASRPAVQTFSAATGPGTSGAWVQVSRLGMPLTNEVISPISDKDAWNARSPYNESALTDGYLQNPELGLYMADDSPMNGAAPKPAGQTYYGQAIPNLVALRIQSKSLAGQPGFGNGFDFRNGAAGLSALYNPAAGSNAGTAFAPPVDGGYGAYLLNGGNAGSPRSVDIKPIFHTGVPNAIPYQLATGKTALVAGKPAVNPLTAGKPFINNFLPVVGDMLRLNMAVPPTPRNSADFSNQGLLAAAALGLADPRFNTSAALQNIPNMDGFPNGRRLEDAVVQIELKAVSGVVLAAIGLWYDDFTTAAPTPLTPQLNGVLTFTTGVETNDTTFRAAFPFLQTPWIGTGSASGPTNTVIIPDLTVSTAMPVESGTYNNVTITGTGVASFNGPIVVNGTLTVQTGGVLSTRGVLATNCLPITGPGSFVLQQGATLRICSPDGISASGATGSIQLAGTRTYAADASYEYNGLEAQATGTGLPSMVRNLTVNNAAGLTVNNGGISVSQLVALTNGNLTTSANQMLTLLSTPTNGTALVVNTNGSVTGPATMQRAIDPTFNAGVGYHHYSSPMVSTTLGDLTTTPGFSPIFNTAYNTAAMPKATTPFPNVFAYDQARVTTSGNPGSQDFDLGFFVPADANTTMTPLVGYDLNIAASSTVDLMGTLNNGPVAISNLNRGTQTQSGWQLLGNPYPSPIDFSQTVGVASTNMDNAVYVYQSTGQYVGQYRSYVNGMGGSSQVAAMQGFFMRATTPNQMASLALTNDSRVTTFATTPSFNRTAADTRPQVRLRLQGSTPLIDEAYVYFEKGATADFDSRFDAYKLPNSSGLSVGSLITSNELSVNGLPPITGSTTVSLNVQVPAVGTYALNALDLLNFDASTQVYLLDNQTGARIDLSKQPLYSFTASATALPGRFVLLFGPNTPLAATPSALAQQVQLFPNPAHDSFTLVVPAELGHGSVSATLYNQLGQVVTKQTLPLTAAGATAQFDVSYLTAGVYTLQLKTGENQVVKRVVVTN
>NZ_CP014771.1|WP_068334163.1|1243254_1243479_+|hypothetical-protein
MKKYTIASAVATVAVCLLGAATPALAQAGAPGSGGPTPTGPSPTQVPIDGGASLLLASGVAFGLKKLRDRRRAR
>NZ_CP014771.1|WP_082808615.1|1243739_1245512_+|S8-family-serine-peptidase
MLLTQPAAWPRLALASSLLLATGCRVAQTTTPAQAVAATVTSAPAAPVAPVVPDVPAPASTAPTPPAGPTVAEAAQAQWYLRDPQLDKTPGTGTTRTYAELLKGRTPAPVIVAVIDSGIDTAHVDLKPMLWRNPGEIPGNGIDDDHNGYIDDVHGWNFLGGKDGRNISVETLESTRIVAKYGPRFAGKTSAQIKPTERADYSLYLKAKKAYDTKRKELTGEVSQYDQTKGFITQLSSAIKEKAGVAKVDTTTLRVAAANIPSEDLKGALMSLYQNMKQGGIGDTDALLAELDTEMKDQREQLDYSMNTKSTARAEIVGDNPDDVNQRNYGNNDVMGPDALHGTHVAGIIAAVRNNNIGIQGIAATPVQIMSVRTVPNGDERDKDVANAIRYAVDNGAQIINMSFGKEFSPHRAAVEAAYKYAASKNVLLVHAAGNEDDNLDVTAHYPSSFYLNGAVPPNLLTIGASGPQDDENLPASFSNYSKRQVDVFAPGVGIYSTLPGNKYGMESGTSMASPVTAGIAAVLKSYFPSLTAVDLKRIIRQSAQVHHTQVLVPGENGKKADFSTLSASGGIVDLYEAVRLASQEAAAKK
>NZ_CP014771.1|WP_082808616.1|1245624_1246620_+|DUF2179-domain-containing-protein
MVPQLFILERLRRLRAAQAAGPTRSLAGHPALADASLVAAPHPARPAWRRQAGGILYLIAGVFSAALGLESFILPNGLFDGGVTGISLLAARLLPSLPFSVFLVLLNLPFIWLGYRQLGKTFAVKALAAILGLALVLVVVHFPVITQDKMLIAVFGGFFLGAGIGLAMRGGGVLDGTEILAVYLSRKASLSVGDFVLVLNILIFLVVALVISVQTALYSILTYLAASKTIEFVVNGIEEYTGVTIISAQSDAIRRALTERLGRGVTVYAGHRGYGSHGEQPSPIDIVFTVVTRLEVSQVTTEVNQLDPKAFIIMHSVNDAKGGMVKKRALH
>NZ_CP014771.1|WP_068335259.1|1246731_1247556_+|MOSC-domain-containing-protein
MSAPSTPLTLAGLFIYPVKSLGGISLPAADLTPQGLRHDRRWLIVDERNRFLTQREHAEMALLVVEPAHNGFLLRHRQRPALLPLYIPFEATPKRTLFVTIWDDMVFAWRGTKAADEWLSEALGQPCKLVYMSDMARRECEPERNPAGTLVSFADGYPYLLVTEESLAKLNTQLTEPVPMNRFRPNLILRGAAADAEMAWSSLRINDLHFRAVRGCGRCIVTTIDQATAHKNPAGEPLRTLATYRKPDQKVIFGQNVTGPVAGHLRVGDEVVVS
>NZ_CP014771.1|WP_068335262.1|1247674_1248349_+|DUF2461-domain-containing-protein
MEIAFVLDFLRRLAANNNTVWMQEHRADYLRARDNFVSLVADVLRRATPALPELAGLTPAQAMFRLHKNDRSQRDPEPYKGRLGAGLVPGGRHALRAGYSVALMPGGGSWLRAGRFRPIPAELAAIRQEIQYDSADFHRIITDTHLLQHFPAGLDRSVEQLSRPPRGYAADDPDLAYLKLKSFGMVRLFSDEEVVAPDFIDRLVAGMVAARPWVAYLNQALLTE

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Crispr_ID: NZ_CP014771_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_4

1275091-1275198

Orphan

Consensus_repeat	Method
TTCGTGCAACGACGGGCGGGGGCAAGCCCCGCACCCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_4

>merge|NZ_CP014771|4|1275091-1275198|CRISPRCasFinder
TTCGTGCAACGACGGGCGGGGGCAAGCCCCGCACCCTACATCGCTCGTCGCTGAACGATTGGTGCTCGATTCGTTCAACGACGGGCGGGGGCAAGCCCCGCACCCTAC

>NZ_CP014771|4|3|1275091-1275198|CRISPRCasFinder
TTCGTGCAACGACGGGCGGGGGCAAGCCCCGCACCCTAC	ATCGCTCGTCGCTGAACGATTGGTGCTCGA
TTCGTTCAACGACGGGCGGGGGCAAGCCCCGCACCCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068335368.1\|1286203_1287835_-\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349910
NZ_CP014771.1\|WP_068335371.1\|1288986_1289460_-\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|234693
NZ_CP014771.1\|WP_082808619.1\|1269868_1270504_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182015
NZ_CP014771.1\|WP_082808618.1\|1268976_1269867_-\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|378389
NZ_CP014771.1\|WP_068335355.1\|1280492_1281788_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335346.1\|1275206_1279067_+\|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|369456
NZ_CP014771.1\|WP_068335318.1\|1266381_1267752_+\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|272979
NZ_CP014771.1\|WP_071955194.1\|1287996_1288851_-\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|369598
NZ_CP014771.1\|WP_068335352.1\|1279512_1280217_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_082808620.1\|1274440_1275019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NZ_CP014771.1\|WP_157550277.1\|1289589_1290165_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335366.1\|1285009_1286017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_071955192.1\|1267922_1268231_+\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|273536
NZ_CP014771.1\|WP_082808985.1\|1283829_1285005_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NZ_CP014771.1\|WP_068335319.1\|1268307_1268847_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377902
NZ_CP014771.1\|WP_068335335.1\|1272161_1272512_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP014771.1\|WP_068335359.1\|1282041_1283352_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP014771.1\|WP_068335332.1\|1270636_1272028_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143418
NZ_CP014771.1\|WP_068335316.1\|1264065_1266123_-\|M13-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341056
NZ_CP014771.1\|WP_068335338.1\|1272586_1274344_-\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068335368.1\|1286203_1287835_-\|M28-family-peptidase	gnl\|CDD\|349910	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. This subfamily is composed of uncharacterized proteins containing a protease-associated (PA) domain insert which may participate in substrate binding and/or promote conformational changes, influencing the stability and accessibility of the site to substrate.	3.2468e-66
NZ_CP014771.1\|WP_082808619.1\|1269868_1270504_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182015	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK.	3.45949e-31
NZ_CP014771.1\|WP_082808618.1\|1268976_1269867_-\|anti-sigma-factor	gnl\|CDD\|378389	pfam10099, RskA, Anti-sigma-K factor rskA. This domain, formerly known as DUF2337, is the anti-sigma-K factor, RskA. In Mycobacterium tuberculosis the protein positively regulates expression of the antigenic proteins MPB70 and MPB83.	4.91845e-16
NZ_CP014771.1\|WP_068335346.1\|1275206_1279067_+\|class-I-SAM-dependent-DNA-methyltransferase	gnl\|CDD\|369456	pfam07669, Eco57I, Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	5.23716e-17
NZ_CP014771.1\|WP_068335318.1\|1266381_1267752_+\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|272979	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits. [DNA metabolism, Degradation of DNA].	2.85222e-86
NZ_CP014771.1\|WP_071955194.1\|1287996_1288851_-\|HIT-domain-containing-protein	gnl\|CDD\|369598	pfam07924, NuiA, Nuclease A inhibitor-like protein. This family consists of protein sequences that are similar to the nuclease A inhibitor expressed by bacteria of the genus Anabaena ((NuiA). This sequence is organized to form an alpha-beta-alpha sandwich fold, which is similar to the PR-1-like fold. NuiA interacts with nuclease A by means of residues located at one end of the molecule, including residues making up the loop between helices III and IV and the loop between strands C and D. The mechanism of inhibition of nuclease A by NuiA is as yet incompletely understood.	1.05806e-37
NZ_CP014771.1\|WP_082808620.1\|1274440_1275019_+\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.01693e-06
NZ_CP014771.1\|WP_068335371.1\|1288986_1289460_-\|transcription-elongation-factor-GreA	gnl\|CDD\|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	1.63883e-59
NZ_CP014771.1\|WP_071955192.1\|1267922_1268231_+\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|273536	TIGR01280, xseB, exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides. [DNA metabolism, Degradation of DNA].	1.14267e-07
NZ_CP014771.1\|WP_082808985.1\|1283829_1285005_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	3.33823e-56
NZ_CP014771.1\|WP_068335319.1\|1268307_1268847_-\|hypothetical-protein	gnl\|CDD\|377902	pfam07700, HNOB, Haem-NO-binding. The HNOB (Haem NO Binding) domain, is a predominantly alpha-helical domain and binds heme via a covalent linkage to histidine. It is a haem protein sensor (SONO) that displays femtomolar affinity for nitrous oxide, NO. It is predicted to function as a haem-dependent sensor for gaseous ligands and to transduce diverse downstream signals in both bacteria and animals.	1.0311e-33
NZ_CP014771.1\|WP_068335335.1\|1272161_1272512_-\|hypothetical-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.36637e-06
NZ_CP014771.1\|WP_068335359.1\|1282041_1283352_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	4.36416e-114
NZ_CP014771.1\|WP_068335332.1\|1270636_1272028_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143418	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.	0
NZ_CP014771.1\|WP_068335316.1\|1264065_1266123_-\|M13-family-metallopeptidase	gnl\|CDD\|341056	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I. The M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the active site's S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyzes bradykinin, substance P, neurotensin, and Abeta. Endothelin-1 overproduction has been implicated in various diseases including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease which plays a critical role in the nervous regulation of the respiratory system, while DINE is abundantly expressed in the hypothalamus and its expression responds to nerve injury. A majority of these M13 proteases are prime therapeutic targets for selective inhibition.	0
NZ_CP014771.1\|WP_068335338.1\|1272586_1274344_-\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	7.91674e-101

>NZ_CP014771.1|WP_082808620.1|1274440_1275019_+|hypothetical-protein
MTVGRINDNNPLLAPDTLFNTARRHRSTTGGGKPRTLLRFMDRRSIRYEGFDYSMAGYYALTLCARDKAHLFGVLPPDEPLQPSPLGELISHELLAIPIHYPTVRLDTWLLMPNHLHLILTLTRNQVVAVSQVMGSFKSRCYGQWRRAQLAAGQPAPPSCWQRNYYERIVRDAAELDAHRRYILDNPSRWNH
>NZ_CP014771.1|WP_068335338.1|1272586_1274344_-|DUF885-domain-containing-protein
MKLRYLPLLALALPACTSPDSKTAAPAADARFDRFKRQFIQDFWRQNPEYASSVGFHKYDSLLVIPNEAQRRSDAAFVARNLGALGGFGLDSLSPGNQIDLRLLTNELRSERWYADTLQNWQWNPASYNLGASVGDLLNGRYYPLDRRLRNISDKITGAQAYYQAARANIARPTREHTELAVKQNEGGLAVFGTLADSVRKSTLSADEKRLASTRIAGAQQAVRGYLDFLQKDVLAGGKDFRSFRIGKALFDRKFALDIQSSYSADQVFELAQKHKAELLHDMGRRAARLFPKYCAGQTMPTDTMRLIRQVIDQLTLKHAPRDGFVDAVKRQIPTLIKFVNDHQLLTQDPSKPLVVRETPGYMRGSGAGASVSAPGPYDTKANTYYNVEPLPPTWTAAQAESYLREYNDYTLQILNIHEAIPGHYTQLVYANRSPSLVKSIFGNGAMIEGWAVYAERMMLESGYGNNSDELWLLWDKWNMRSTLNAVADNLIQTQNASEADVVQLLTGAGFQEEAEARNKWHRATLSQVQLSSYFTGYTEIMALREEVKQKEGSKFNLKNFNEQFLSYGSAPVKYIRQLMLNRKK
>NZ_CP014771.1|WP_068335335.1|1272161_1272512_-|hypothetical-protein
MTIEARQPVVDADDEQLRRLIHEHLKVFAKFTSDNCAACAALAPPFAKFVDAPDNAGILFVRLDSDQNPVAQQLMKERVAPFFVSYCQGRLLECDALTEESEVVAQLARLRAFELG
>NZ_CP014771.1|WP_068335332.1|1270636_1272028_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MAIESVNPYTGQRLRRFPAFSWARTERILAQAHGAAAAWRATSFAERAAVLRRTAALLRERQDELAYLMAVEMGKPLRDGRAEAQKCATCCDYYATHAEGFLADEVVPTDAGRSFISHAPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHAANVPQCALALENIFHDAGLPPAAFRTLLIEAELVAPLIADDRVRAVTLTGSERAGVAVGTAAGRAIKKTVLELGGSDAFIVLASADLPLAARTAAQARMLNAGQSCIAAKRFIVEKSVQPEFVRLLKGHLAQLRYGDPLADTTDYGPLARPDLADELSRQVADSVARGARVALAGGQPRPGSTRFDPIILTNVKKGQRAYTEEFFGPVALVLTARDAAHAVRLANDSPFGLGAAVWTRDAAQGEAMARELNCGAVFVNGLVKSMPELPFGGVKKSGYGRELSYLGIREFVNQKSIWIARAAQSEPSL
>NZ_CP014771.1|WP_082808619.1|1269868_1270504_-|sigma-70-family-RNA-polymerase-sigma-factor
MWATFAANSRSFRLVRLVYSSAFSLVSDLSLISTPTAAEAALVGRLRDRDQSAMTEFYDRYSAALYGVINRIVKDEEEAEDVLQEALVKIWHSMASYDTTRGRLFTWVVNISRNLAIDKIRSRQHRVSSRTQGLDDSLAAQRQAAPDSFRPEHVGLQEITRKLVPEQRQIIDLLYFGGFTQSEAAEELNLPLGTVKTRARTALKVLAKLIR
>NZ_CP014771.1|WP_082808618.1|1268976_1269867_-|anti-sigma-factor
MVTSVEDFQTYIESGRLEQYALGELNPADQAEVEAWAARSPEVRQELDELINGLAVYAEAHSVAPPAGARERVLGRVLAQISVEEAPVAATPAPFAAPPVMRVSASNPPPAETYAPAPVAQRSSGWAIAASVALLLSLAGNALLYSRWQNANSELVAAQNNQARFAQTSQVVEHRLQNTQSQLQVFRSPQFKTVALAGTPAHPQAHARVLFNRVNHRVYLDVQELPPLPAGKQYQLWALDKGKPIDAGLLAATTAAGGDLQQMKDIASAQTFAMTVEPTGGSAGPTLTTMTVSGNI
>NZ_CP014771.1|WP_068335319.1|1268307_1268847_-|hypothetical-protein
MHGTIFTLLKRYVQTQYDHSTWLKLVEAAGIDSGDFSHREVYPDAHMYALIGQAAEKTGIPAGELHEKFGEYLVPDLMYMYQKYVDPDWRTLEMLENTEHTMHDQVRREHPENAPPVLQVTRLNDSELLINYVSPRRMGGLAVGIVRGLAIYYDEADRIDVMPTTSEDGERVQIHVRRN
>NZ_CP014771.1|WP_071955192.1|1267922_1268231_+|exodeoxyribonuclease-VII-small-subunit
MTYNEAIQELETILRSLETDQVDVDDLTARAERSAELIRLCRHKLRHAETSLDRVFDSLDEEEAEEPEDAEPEEDAPDEEDEDDADEYQSGGPGRPVSPRLF
>NZ_CP014771.1|WP_068335318.1|1266381_1267752_+|exodeoxyribonuclease-VII-large-subunit
MPLYPRRAAPTPTEPAAPLSLGALLAQVRAALHHRFPDSYWVVAEVAEMTRPRQAGGHCYLSLTEPAAGSEALGFTAQARATLWGSRYAQLAPAFAEATGQELRPGLRLLLRVKVTFHEQYGFSLDVLALDPSYTVGELARQRLATLRRLQEKDLLERQQELALPLAPQRLAVISSPTAAGFQDFVRQLEEAPYDFALTLFPALMQGEGAPVSIRAALDAIRPRRGQFEVVIIIRGGGAKTDLLAFDEYGLAAAVAAFPLPVLTGIGHERDEAVVDLVAHKALKTPTAVAAFLVERLARLEGLLLDLAERVAERSRQHLARHHAQVQRLADHSREAARQQLRRATDQLGQRGRQATQAPRQHLRQLGQHLESFRYTLPRAARQAVAHEAQRLRRRLRTVLQRFARHHQRRREQLLRQQLTTRWKFELILKNRELKTVNYEVNILRQENKLLRQSGK
>NZ_CP014771.1|WP_068335316.1|1264065_1266123_-|M13-family-metallopeptidase
MSKISRYQRGAALAVAALGLAAGPPALAQTTAQSGVGINPANIDKSVQPCADFFQYANGTWLKNNPVPAAESRWGSFNELADRNYATQKSILEELAGKAATAQPGSNIQKVGDFYAAAMDTMAIEKAGLTYLKPSLDRIAGLKTLAQMQAFLGDPHAHAGSVWFNSGVGQDEKISTQYAVQFYQGGLTLPDRDYYLKEDARSKNIRAAYQTYLMGTFTRLGDTEAQANEHAAAVMDLETKLAKASKSRVDLRDPQANYHKMTVAQATKEFPNLNVPLLLKESGLGTAKEVIVGQPEFLQEVSKLLASTPLATQREYLRFHLVNSVASALPKAYGDAAFKFSQVLSGAKLQQPRWKRELRATDGALGEAFGQLYVDKAFSPTAKAKAKEMIENLRKAYGERIMATDWMSAATKKEALVKLNAFTVKIGYPDKWKDYSKLKITRQSALQNVLAARTWAAEDNLGKFGKPIDRTEWGMTPPTVNAYYNPPMNEIVFPAGILQPPFYDPKADDAVNYGGIGAVIGHEMTHGFDDQGRQYDAKGNLRDWWTKEDGEKFNTKAAMVGKQYDAFSPLDSVHVNGKLTMGENLADIGGLTIAYQAFQKTAEAKSGTSLDGFTPDQRFFLAWAQIWRTNIRPEAARQQVQTDPHSPAQFRTNGPLMNMPEFYKAFGCSPTDKMERPTAEQARIW
>NZ_CP014771.1|WP_068335346.1|1275206_1279067_+|class-I-SAM-dependent-DNA-methyltransferase
MLTLCPETPTQALDLAFRRQKPTRAQLDDFQLARQTLLAAINPDESEEHLKKPLMDFLAHPGVLGPDYYLNVRKKRDLVVRTGPKEAAPVGVLLEVKKAANKAEMVTPHDLNRKAFHELLLYYLQDRADKTADNLRRLVITNGYEWFVFDALDFDRLFWRNTALKNDFLAWAGGKKDSKKASHTTDYFYQEIAYPCLAGLAAELPFAYLDLRTEPATERDRITLAKLFQAPHLLKAPFAQDANTLNRAFYEELLYLIGLEEVPEKGRKLIKRVAPAEREHAGSLLRNTLDVLRGEDLLANLPAAERTPYGDTPADQLFGVALELCLTWINRLLFLKLLEGQLRRYHASGNPAALTDKFRFLTPELLPDFTALNDLFFQVLNTPADQRTPAVQAAYAHLPYLNSSLYEPSELERRTTRIRGLNSARTLPLYRKSVLPAQAQPPATLAYLLRFLDAYDFASEGDEQVQETHKPLISAAVLGLIFEKLNGYQDGSFYTPGFITMYMARHTLRRAVVQHFNRRSGYGAADVAALADALPPHSRVADSAYFNTLTVLDPAVGSGHFLVSALNELLAIKAELGLLLDEDTGKRLRYRLTVARDELVVVHEDDDPHDPNALFQYRARLDPATGLRTVAPAHTALQRALFQEKRHLIEHALFGVDLNPNSVRICRLRLWIELLKHAYYLPETGFAQLETLPNLDLNIKAGNSLLARFDLGADLSDVFRQSRFTLATYRDAVHAYFNTRDRAAKQELQKFLGQIKEQFTQALHKRDPLREKLRRARNERTVLETQGQLLPETPKQRESRDFDIRRLTLLVEQYEKEVERYEQGQLYRHAFEWRFEFPEVLDEKGQFRGFDVVIGNPPYIRQEEIGDLKKHLKIRFTTFISTADLYVYFIELGVSLIRPEGELSFITPNKWLRSNYGLPLRNWLATQQLTELIDFGDLPVFPEAATYPSILTVRRDAPVDTFRTATFSILPAPAKFDEEVTASLIDFDVSRLNTEGWNLGRADQHLLLEKIRASGTPLEQYVKERIYRGILTGLNPAFVIDKTVYNEILTADKNSAQLLKPFLAGREIKRYRQAHADKYLILIPSGWTRFALGWQQDAKGRWHSPIQENYPTPWDALRTAYPAIAAHLLPFAERAEARHDKGHFWWELRSCDYYVDFEKPKILLAEIAANNEFTIDTQGLYADTTAFFIDSDSLFLLGLLNSKTTLFFVKQTGSEIRGGFSRWKRQYLNPIPIPHATPEQQAEIAALVEQVLAAKAAGAPTAPLEAAIDALVAARYGLTPAEVAQL
>NZ_CP014771.1|WP_068335352.1|1279512_1280217_+|hypothetical-protein
MLTANQDNRLTAAENLLAALRQDPTPYATDKALQTGIARLAEIIADMQPLRQQAQRSSATRVAGQPSDKQQARQHLTQVAGEVAGDVFAYASEQHNATLQAVADYSQSDLAKLRGSRLTDAATALYQATQDAAYKKALQATYALTDARLQELQDALAAFHDLKTEPRQAVIAGKTARASLRVEFSELSTLLQDRLMRLLRKYERQAPAFYARVVAARQVVDRPGSVTSAPVGAL
>NZ_CP014771.1|WP_068335355.1|1280492_1281788_+|hypothetical-protein
MNLLATFRPLLLGLGLLLPTLLHAQTTTTTATAPAPTPPRPADETTAQAQATVLLLTRRVDSLRLAYRQQQRLYSDLGGKFTSFLAGQQLSRSTRFALAKGNVRATADLLLVCHSRLAQLRALTQALRNANEQAALSSPTDSNPLGISLVEYTKTLVTNKAVDKSKGRRLVDLAAHLSQSSYVTALPTVGPMLNAVGELLSSVRASSLSSDGFTAAQVRIIEDGLRPTVHFFAALDAARADNQASLLTLDNELLVLQHQLSQLYRPYVQLVAYQEDIGAYYTAPSPGQSATNTLDVSNISRMSNYVARQLNARFTSLDQSFARAQNQGDILDPDGYLTPANNSAEAAVQLAAQLQSLTDRLPVITTQYSAAIRAAIAQGQQDGLIKSDRANKVIADETARAKAAAETYQQARASERFGEILGNVKPLFKLY
>NZ_CP014771.1|WP_068335359.1|1282041_1283352_+|NAD(P)/FAD-dependent-oxidoreductase
MSATSELTLNIPAATKPRVVVVGGGFGAVNFVQSLPGDQYQVVMLSKTNYFGFWPLLYQVATSGLESESIGEPLRQLFDGHQDFHFRSVGVNSLDPDQKLVHTAVGDLPYDYLVLATGTKSNYFGNAEIEKNAFPLKDIGQAVDLRNQLLRSFELANLTQDPAERQRLLNFVIAGAGPTGVELSASLAQMRAHILPEDYPDLDITKMNIYLVEGEGRVLPPMSDYAGEHALAYLKELGVEVKLNQLVAAYDGQTVKLKAGEAIETHTLIWATGVTGNLIPGLPDDRVEHNRYLVNQFNMVKGYQNVFAIGDIAMMKSKDYPKGHPQVAPPAMQQGTHLAQNLARERRSEVWVPFSYWDKGMLAIVGRGRAVADLPGGLHLGGLPAWITWLTVHIFYLSGFRNKVVVMANWAYRFFTHQRGTRVIIETNSARGVGRS
>NZ_CP014771.1|WP_082808985.1|1283829_1285005_+|DNA/RNA-non-specific-endonuclease
MQFDAPAGVRRISLLAAAYGQDGPSTWELWVSRDHGSTWQRNGQPQTTSGPTLRPATFEGVAAEPLRLEIRKTDAGKGRLNLDDISLETAGGPVVAAPTPTPPAPANDYFKNRNNPTTRNRERGTRNQEPITSSQQSGTADNLLLGNPSGATSDPGNPTNYLYIHPQYTTGYNAQRGIPVWTSWHVGRGDLTKNAPRQNDFRPDPGLPRQFYQVTPQSYTGSGFDKGHNCPSGDRTSSLDDNSATFLMSNMVPQAPQNNQQTWAHLEEYTRAQVENGQEAYVIMGSYGRGGTGKNGPASTLDQGRVSVPARIWKVVVFLPEGDNDLQRIIAGQARIVAIDTPNDNSINPQWTQYLTSVDKIEAASGLDILSALPPATQATLQRVVDSGRAR
>NZ_CP014771.1|WP_068335366.1|1285009_1286017_-|hypothetical-protein
MKTRCSCAVFVILCSIIRMAYGQALREAAEQTVRNYVADNTNGIKEDPKRNIFINKKTNTIHLFMLSDGGLLLKGYPTTATDKNFFELHVLTEESDTSSYSFEADGEYKPIFTIDTAFGKLTKADKKKIYIKIKWLDFPLVGPYTTQVVFTVKRNGMTPPLATHTISIANSIHASIGSGFVYSTLKNPTNIRAVPLVNSSKDSTLIADNATGKVTLTLMATLYPWGRNSLLMPSWRFRDRAGIVVGTTIASSTKNFQNLYLGLQYDFAIGGSVVAGADIASRQRILGIDYHDFTFGESRFTGKLPNKLYTSVGVGFFFGVQVDSRILAKLFAAAP
>NZ_CP014771.1|WP_068335368.1|1286203_1287835_-|M28-family-peptidase
MNKFVFAAGLLLAQASLAQTIDPAALAVLPTVQPTALEAHVRYLADDRLRGRLPGTPGYQLAVDYVVSQLKKNGVAPAGERGTYIQAVRLRRAFMEAGAAASYQPAGGAAQPLAVGPEITFYPNPGQAEVRVADAPLVFAGYGISAPELKYDDYAGLDVRGKVVVVTRQRARQFADNERQYFADLRTVLETAARHGAAGVLLAAHADTKLPEFPKGLVSALNPESQVAVSRSYAAGSAQLVGSLSAVALQQFFAGAARDTGQVLSALRAGQPASLPLPGRLSARYASRYHDVDSYNVVGKITGSDPKLKGEYVVHSAHLDHLGVGPAINGDSIYNGAHDNATGVASVLEISRLYASLKVKPKRSILFVLVTGEEMGLLGSAYFAKFPTVPPGALVADINTDMPTLIAPLLSVVPLGADHSSLMQEVKTAADYLKISIEPDPELAQNRFIRSDQYSFVMQGVPALHLKYGNRTADGKNNLSETVQQWRALTYHKPQDNFEGGTFDWAAGAQYVRLNFLIGYQVAQGVGRPNWNKGDFFGVRFGR
>NZ_CP014771.1|WP_071955194.1|1287996_1288851_-|HIT-domain-containing-protein
MPSIFSRIVSGELPAFKVAEDADHLAFLDITPLVEGHTLVIPKQEIDYIFDLTPQALAALTVFAQRVAQGVRAAVPCQRVGVAVIGLEVPHAHIHLIPLNKVSDMNFANPKIKVPDDRMRALATAIAAQVPGGSGLPTPDAAPDARAAAPAADPNDATLAQLQKLTQGLNFISESDAPLQAVSYAAPTGDLSNAQLLQALGEPAGTPVAKVELTDFLSNHTADHGVTGSLATANRFKALQLYLKQELDGTQVYRVGKGTQIRAYALGRDVAGRLAGFKTVLTAT
>NZ_CP014771.1|WP_068335371.1|1288986_1289460_-|transcription-elongation-factor-GreA
MATINYYTAEGLQKLKDELQDLKVRGRAKAAEDLREARDKGDLSENAEYDAAKDAQGLLELKISKLEEVLGNGRIIDETNMDFTKVLIMSKVKLKNLKNNMVLDYLLVAEEEANLAAGKISVKSPIGKGLLGKSAGDVAEITVPAGKLQFEILEVSR
>NZ_CP014771.1|WP_157550277.1|1289589_1290165_-|hypothetical-protein
MRNSDWGEAFDQALLQLLGVQIPGYRPANGRHLLALFWPAHHAPLLIELLDLGEAPKLSVAVLELPLINHVMAWWANDPAVPCEVAPLTWCHTTLNTTKPLATKVLRALRAQLDALESSRWPALGSGRDGLGITFWLSDQRGPQQLGWSDTTHELAGTPWTLAVSLLRQAERIPQVQAQVAVALRYLKPAK

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Crispr_ID: NZ_CP014771_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_5

1487034-1487137

Orphan

Consensus_repeat	Method
CCCCCTCCCCTTCGGGAGAGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_5

>merge|NZ_CP014771|5|1487034-1487137|CRISPRCasFinder
CCCCCTCCCCTTCGGGAGAGGGGGGACTAGTCTCTAGCCCTAGTAAACCAGTTATTAGTAGTCTAAAACTAGGACTAGTCCCCCCTCCCCTTCGGGAGAGGGGG

>NZ_CP014771|5|4|1487034-1487137|CRISPRCasFinder
CCCCCTCCCCTTCGGGAGAGGGGG	GACTAGTCTCTAGCCCTAGTAAACCAGTTATTAGTAGTCTAAAACTAGGACTAGTC
CCCCCTCCCCTTCGGGAGAGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068335903.1\|1493987_1495085_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350237
NZ_CP014771.1\|WP_068335890.1\|1490593_1490947_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335859.1\|1474583_1475516_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP014771.1\|WP_068335900.1\|1492944_1493547_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335884.1\|1487247_1488675_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP014771.1\|WP_068335874.1\|1479270_1480074_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235726
NZ_CP014771.1\|WP_071955210.1\|1473674_1474445_+\|DUF1223-domain-containing-protein	unknown	unknown	gnl\|CDD\|369071
NZ_CP014771.1\|WP_157550296.1\|1493667_1493829_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335879.1\|1482969_1486692_+\|gliding-motility-associated-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639
NZ_CP014771.1\|WP_068335864.1\|1476269_1476980_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|214500
NZ_CP014771.1\|WP_157550295.1\|1478318_1479107_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274843
NZ_CP014771.1\|WP_068335861.1\|1475605_1476055_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335896.1\|1491166_1491541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335867.1\|1477546_1477936_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068334942.1\|1488982_1490107_+\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP014771.1\|WP_068335876.1\|1480327_1482607_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225828
NZ_CP014771.1\|WP_068335898.1\|1491688_1492717_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|100030
NZ_CP014771.1\|WP_068335887.1\|1490374_1490590_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335893.1\|1490968_1491166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068335854.1\|1472879_1473488_-\|AhpC/TSA-family-protein	unknown	unknown	gnl\|CDD\|239268

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068335898.1\|1491688_1492717_-\|thiamine-phosphate-kinase	gnl\|CDD\|100030	cd02194, ThiL, ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).	1.20567e-115
NZ_CP014771.1\|WP_068335859.1\|1474583_1475516_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.13736e-09
NZ_CP014771.1\|WP_068335884.1\|1487247_1488675_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	2.86171e-122
NZ_CP014771.1\|WP_068335874.1\|1479270_1480074_-\|SDR-family-oxidoreductase	gnl\|CDD\|235726	PRK06181, PRK06181, SDR family oxidoreductase.	3.25375e-91
NZ_CP014771.1\|WP_071955210.1\|1473674_1474445_+\|DUF1223-domain-containing-protein	gnl\|CDD\|369071	pfam06764, DUF1223, Protein of unknown function (DUF1223). This family consists of several hypothetical proteins of around 250 residues in length which are found in both plants and bacteria. The function of this family is unknown. Structurally it lies in the Thioredoxin-like superfamily.	1.28404e-73
NZ_CP014771.1\|WP_068335903.1\|1493987_1495085_-\|NYN-domain-containing-protein	gnl\|CDD\|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	9.11769e-23
NZ_CP014771.1\|WP_068335879.1\|1482969_1486692_+\|gliding-motility-associated-C-terminal-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	1.8533e-24
NZ_CP014771.1\|WP_068335864.1\|1476269_1476980_-\|GAF-domain-containing-protein	gnl\|CDD\|214500	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases. Mutations within these domains in PDE6B result in autosomal recessive inheritance of retinitis pigmentosa.	5.8524e-07
NZ_CP014771.1\|WP_157550295.1\|1478318_1479107_+\|hypothetical-protein	gnl\|CDD\|274843	TIGR03900, carboxyl-terminal_protease_family_protein, putative carboxyl-terminal-processing protease, deltaproteobacterial. This model describes a multidomain protein of about 1070 residues, restricted to the order Myxococcales in the Deltaproteobacteria. Members contain a PDZ domain (pfam00595), an S41 family peptidase domain (pfam03572), and an SH3 domain (pfam06347). A core region of this family, including PDZ and S41 regions, is described by TIGR00225, C-terminal processing peptidase, which recognizes the Prc protease. The species distribution of this family approximates that of largely Deltaproteobacterial C-terminal putative protein-sorting domain, TIGR03901, analogous to LPXTG and PEP-CTERM, but the co-occurrence may reflect shared restriction to the Myxococcales rather than a substrate/target relationship.	0.00226799
NZ_CP014771.1\|WP_068334942.1\|1488982_1490107_+\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	7.83455e-23
NZ_CP014771.1\|WP_068335876.1\|1480327_1482607_+\|PKD-domain-containing-protein	gnl\|CDD\|225828	COG3291, COG3291, FOG: PKD repeat [General function prediction only].	7.09228e-16
NZ_CP014771.1\|WP_068335854.1\|1472879_1473488_-\|AhpC/TSA-family-protein	gnl\|CDD\|239268	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.	1.20965e-33

>NZ_CP014771.1|WP_068335879.1|1482969_1486692_+|gliding-motility-associated-C-terminal-domain-containing-protein
MLALLFRRWPLLLLLLGLAAGPAQATHLLGGEMTYRYLDANGPAAAPVRYEITVTIYNNSNPGAAQSNTNAEVGIYNPTTGAKVQLVQGTNVLAGSGASVTGGSMNITRYTISGVLQPAIPAGCTVSGPAQPFRLQKFTGVVNLPATLDGYYAVFTRSARNVDVTNLNTLGNNQPLTLYTTLAPALRPNHSPVFSDTAVAIVCQNDTTISLNNAVDADGDRLVYSFGSPYGTFPSSGGNLPATFPPLPNAIGYYNGYSMAAPFGTGAGNFALLNASTGIATYGATTQGKYVVAVDVSEYRTINGREVLIGTTRRDLQLIVALCPSTKAPVLPSAVVTPRSYTIEAGQVLSIPITATQADGHPLIMTLNSALLDGPGGFAATFNNSPGSVATGALTGTATASGNGTVTGTFVYNSACADARPTPYDIALTVKDVGCGGKTVADVIRVTVTKPSGPTAIAGDALICNLNTVSTYTASGGTAPGISWRVVGGTFVNGRTSNPVQVKWATIGTGLLVARGVSSYGCLTDSVAQTVSVAPAGALVVTGALSVCQGGSTTLTVAGGTGPFIVTGGGATQTGPGPFTVTPTQNTTYTITSTVATGGCNGVGQATVTVLPLPAADAVVGPQSVCPTIMGVAYAIQKPGSTAYQWAVTGGTIASGQGTAAITVNWGAAGAGAVSAYATNGQGCPSQVFTLPVRINPVLQTARPTGPVSVCQADGPYPYQTLLTNGSSYAWQLSGSARGTLVNSLNTTSITFTQAGLAKLVVTETSNPTGGICRGVSDTLYITVKPSPAANLAIQGPDRFCVNSGAQTYSLPGAAGSTYVFQLNGIPIANVNGSVSIPASTAVGTYTLTARETNAGGCAGILYTRTFIVDPRPGALTISGPRFVCPSTSSLTFTVANPTPSSTYQWTVTGGTLTAGQGTTTITVGFAAGTTASATVSVLETSQYGCAGAPVVITIVPDNAQAPQLTLASVEPTDNTKVTLTFSVANSGATPNPVRVLRRDAGSTAAFVPVGTVAATATTYVDATANAAQTAYEYSLALTNGCGDVFTAPASVTTVLLKAVAMPGPGGRNQGSTSLSWSAYQGFAVVSYGIYQQNDNAGYKLLATVSGSTLQYNVPNTAQGFNQCFRVVALQFNGGGSFLQLQSNSNTACVDFANKTAFYNIITPNGDGQNDLLIIDNVTLYPGNSLTIFNRWGREVFATTNYNNTTNAWGSDPSIAAGIYYYLFKLADGTSTKGWVEVVK
>NZ_CP014771.1|WP_068335876.1|1480327_1482607_+|PKD-domain-containing-protein
MLLPLHSWVTKLAGLSLLLAPALSQAQCPIAASCTPGKATSALASAYGMGIFNVTLGSINNSSGNYTEGYKDFSCVATGAVSTSLTVSTSTPLSITNGPLANENVRVWIDYNNDGVFSTDELAFTSDNKKLHTGSITPPATAVTGRPLRLRVASDFADIPAPTACSTPQYSQDEDYTVTLVANTDRPTAAFAASTTTVCAGAVQFTDQSTGAPTGWLWNFGDGTTSTAQNPAHTFATAGTYQVTLTATNAVGSSTSAATAITYNASVPVAASCAGLAATANCCNYGLTRVRLNTIDNPSADGSAGYQDFTCPQRTSLMVGKQYTLLLTTGGTNAHDTRAWLDLNNDGIFSANEKVAEALNTVSPSFSLTLPATAVLNQPLRLRLVADGVGTNPQPCVAPTLGQVEDYTVTAIPNTSPPTAAFTSTYVAGVCTSPANTFTFTDQTTGSPTGWAWSVSPSTGVTFVGGTSAASQNPQIAFATSGYYTVTLRASNANGSTTAASPTPLLIQAPCLTYCASNGGYAAATSSLWITGVSVSAATGAAAFSNASANSAGGYTFYADQSVPLVAGATQTIAVTTNQTYTHRILIWIDYNHDGVFSNTTGTGGELVYNTLVAGATNSVAVTVPGTVGSTRMRIAVNISNNTPNACATFQGEAEVEDYPVNAGQPLAAREALALPALTVSPNPTPDGSLRVQVSDALAGGLYDLEVLSPLGARLLAQSLRLSPTAPAALDLSALPPGLYLLRLTNAQGQSALRRVVRQ
>NZ_CP014771.1|WP_068335874.1|1479270_1480074_-|SDR-family-oxidoreductase
MKNSVVLITGGTSGIGRACALEFGRAGARVVVTGRDTAKLAATAAELAAAGIEHRTVQGDVGIVADANRAVADTLAAFGRLDVLINNAGLSMRAKFADVEVKVIEQLMQTNFFGTVYVTKAALPHLLASKGTIVGISSIAGFRGLPGRTGYSASKFAMNGFLEALRTELLPEGVNVLTAAPGFTASNIRHTALLANGQTQNDSPRDEGKMMTSEEVAQHLRRAVARRQRTLVLTAQGKLTVFLNKWLPASVMDKLVLNNFRKEEGEF
>NZ_CP014771.1|WP_157550295.1|1478318_1479107_+|hypothetical-protein
MNLTTPLRKETRALPWLGRLAWFIRLPFWLLATACGPINFSASPTPQATAELRQADLLFEQGNYAAAAPRYRTQIWQQRQISPRLLLRMAYAQHQLGHYPAELLYLNLAQAQQPRLSTWRQLVAVAQRQRLVGYPSTWQQELRVQALRYYYPGLQGLLTGAVVAAMLLVLRRGRSGRGTWLAYATYLLGTGAYLVLLRPEPVGVVTRAGSALMAGPGAGATWLSTAAPGDRLPVLGHDDIWLRVRWQERVAYLRATDALVVE
>NZ_CP014771.1|WP_068335867.1|1477546_1477936_+|hypothetical-protein
MKLFLFAALLLNAPVAWAQTAPAAPPTTAPAPYRYCALVVDDRYFSIPDRLALDYGQGAPGALPDPEMAEMATNIRGSRSVIDALNYLTRHGWELVQVTTVPSETTGSGTDYRHYVSSETRYLLRRRSQ
>NZ_CP014771.1|WP_068335864.1|1476269_1476980_-|GAF-domain-containing-protein
MPILADLSPVNELERLYALRQTDILHSLQEEVFDELVALSARLFGLPISYITLLDTDRLHYKASYGLPLPPPAPRQDVLCAQVVRHNRVVLYHDLNAATQTPVDAPAIASALAQQARFYVGAPLRTAADHAIGTLCLVGPTPRSFSPQEQQVLEQLATVVTGLVVVRQRCLHTPALGAAHWRRVRDLVREEIHSLSTLMRYLLQRYGALVPVPDDVLHLMERRLRDVQLLLDESAD
>NZ_CP014771.1|WP_068335861.1|1475605_1476055_-|hypothetical-protein
MKSTLLLVGALGFTFSVRAQYAPGAASLVTLGVRALSNRDAPQQKATLFVTPATYQAHAFPQKRTPAKKLPRPDKGGTEIAALEQLLAGRFAALQADSTAVLLDVAQEKEFSRLRTNLETFNPFWNTDPYSQEMNLYRQHDAARRRLAR
>NZ_CP014771.1|WP_068335859.1|1474583_1475516_+|T9SS-type-A-sorting-domain-containing-protein
MKTLFRTSLLAGLFCAALSAAQGQALANGDFETWAARNGVDSPTGWLTTDDVVTALSPIAFATGTFTKTTDAHGGTYAARLESKTTPLAVLPGAVAVGTKVGSNVALPGGIPFTGRPTMLQFYYKLSGPQPVAASDGAFAQVALTRYVNHTTQILATGKQVFTTLTSTYVLAQVPLTYTSSATPDSVRLVLSSGAIITATAGPVSGTVFQVDDVSFLGTATATRNAALSATLTVAPNPSPDGRYLLHAPPALLAAALAVTDATGRVVHREAALTTSAATRALDLSGLAAGLYTLQLVADQGLVTKKLVVE
>NZ_CP014771.1|WP_071955210.1|1473674_1474445_+|DUF1223-domain-containing-protein
MKLALLAFAPLVLAGLAGSRPAALPTPPPAAVPVVVELFTSEGCSSCPAADEVARTLEATQPVPGAEVIVLGEHVDYWNRLGWKDPFSAAGFSERQRQYASVFTEGSYTPQAVVNGRYELVGSRRAELGQRIAEAARAPRAAVALSRPTATTLAVRVGSLPPGTAATEVLLALTETGLATQVGRGENAGRLLHHAAVVRALRPLGAVGADGTFAVTVPLSLAAGWQPARLRAVVLVQERASRRIVGVGTLPLALAN
>NZ_CP014771.1|WP_068335854.1|1472879_1473488_-|AhpC/TSA-family-protein
MLKIFPLAAALLLAGSAHAQTPATPLTASALAVGTVAPAFKGQDAAGRPVELRQLLKKGPVVLYFYRGQWCPYCNKQLSQLQDSLQTLTSKGAQVVVITPELPTNIDKTVAKTKLSIPIVHDQDFAIMKAYKTAFTVDDATAQKYQGFGVDLKAANGATTNVLPVPATYVIGRDGKIQYAFFNPDYRHRASVRAVAQALAAR
>NZ_CP014771.1|WP_068335884.1|1487247_1488675_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MPSKATKLANSIPPEALQHVEIQDMVAEGKCLVRINNLVVFVNQVAPGDVVDLRISKAHKRFMEAMPTRFHTYSELRATPFCQHFGTCGGCKWQHISYDAQLHYKQQQVADQLGRIGKVALPEIAQIMPSPERTYYRNKLEYTFSGNGWLTEEQIKDEGAQYDRRVLGFHTPGRFDKILDVEHCHLQPEPSNEIRLFIRDYARQHRLPFGDMVRQTGLLRNLIIRTAASTGETMVILQCYHDDEALLPLLDAVYAKFPQITSLNYVLNNKGNETFHDLEVVCYQGKPYIEEDMEGLRFRIGPKSFYQTNSAGAHNLYKVARDFAEIKPTDLVYDLYTGAGTIANFVARQARRVVGVEYVEQAVLDARVNSEINGVGNTEFFAGDMKDLLTEAFTSHHGHPDVIITDPPRAGMHEDVVQRLVALRAPRLVYISCNPATQARDLELLDEVYKVTRVQPVDMFPHTHHVENVVLLELR
>NZ_CP014771.1|WP_068334942.1|1488982_1490107_+|ISAs1-family-transposase
MEEEVADFFWQVTDYRVEGRCLHELSDIIWLVLCGLLADCEDFEQIYDYACDKQAVLAQFLSLPAGIPSSYTLQRVFSRLNPVELEASLTHWGQDIMRVLAGQQLAIDGKQVRGTCLPGQRQASVQLVSVWATEQRLCLAQTQVASKANELVAIPQVLDLVEVAGSVVSIDAIGCQRAIATTLVERRADYVLALKQNQRTLFEQVQAHLAPLLRQEPAFVSREKDHGRGEERRVWVSRNLNLVEEAAEWAGLAAVVCVQTRRWQQGREQHSTRYYLSSLAQASAGELAGYVRGHWGIENDLHWHLDVTFAEDACRVRQGHAPRNLSTLRKLALTLLRREPTKMSLPRKRKKAARDDDYLRQLLRQLAPQPPDAN
>NZ_CP014771.1|WP_068335887.1|1490374_1490590_+|hypothetical-protein
MDIATVFAGSMAVASLALLTWKVTRALSRPTIRVTRADTGASVVLDRPTANQSRNERSAQVHKLLELVSAA
>NZ_CP014771.1|WP_068335890.1|1490593_1490947_+|hypothetical-protein
MADESPKPEATPSPSFSSYEGLGSTVLVALANLIPSSQGRIVATIVAAPLGAVIGRFINWKIQQRKRADVRLIINEEIDDVRKELARADLTPERREKLNDELERLRGVRFKQLLLDS
>NZ_CP014771.1|WP_068335893.1|1490968_1491166_+|hypothetical-protein
MATSPTPSRLGYEPPGVDLTIYSRPRTEAEEKEISAFFQKLRAENDKNPEIVALRERLARRYPKP
>NZ_CP014771.1|WP_068335896.1|1491166_1491541_+|hypothetical-protein
MDYFNDPELNGKYLGTITKDFATASDTIREASYQIRKRDISRYPVFVFARQTVQLGSLLINGDELDLQWHVFASYLEILAQQGIVDPEKIADFQETWKNPDEFCCLFVVDEEFTNFVYIPYPED
>NZ_CP014771.1|WP_068335898.1|1491688_1492717_-|thiamine-phosphate-kinase
MADLTPLSQLGEFGLIRRLQRDITLTQVSTILGIGDDAAILAPPAGQEIVVSTDLLVEGVHFDLSFSPLKHLGYKAVAVNVSDVAAMFATPTQIIVGLSLPPRFTVEAVEELYVGMRLACEAYGVDLVGGDTTGSRGGLVISVTALGQVAAGQAVRRSGGRPTDILCVSGDLGGAYLGLQVLEREKQAFLADPETQPELDNYEYIVNRQLKPEARLDIVHELRELGIHPTAMIDISDGLASEVMHLCAASGTGARVFSEYLPLANPTLEAAAEFNLDPIMAALNGGEDYELLFTIPVADHAKIKNHPDITVIGHLTEHDDAVNLITKAGQAVPLRAQGFNHF
>NZ_CP014771.1|WP_068335900.1|1492944_1493547_+|hypothetical-protein
MKAVLFASLLTLAVLPMCKPDATSTTATTTESPASPAAVRAQFDILRDSADVNWQRMTASDDKTLGNLRELLQDLSKYPGANQPKLAELRGDRARIQKQRYTRETMASSALIDRYDAAQDSLLKAVYAVAAPGGNAPSEGVRDRVEAVQLADNNVVGYRAHYDAAAKAYNNYLQLHREELDKMGGNYAKLRPLPLFELSQ
>NZ_CP014771.1|WP_157550296.1|1493667_1493829_+|hypothetical-protein
MSKFFTYLRLPLLALATSFALTSCFDHDKKCDPKPKPTICPKPTTTIPAGGAN
>NZ_CP014771.1|WP_068335903.1|1493987_1495085_-|NYN-domain-containing-protein
MLTPTPLAAAPPASPYAAVFIDFENVYYFLKNHYLDPQDPHDYALDLVRALRDSLKRDQGLDSLVLNAYADFDKIPTGPQGPLYLMGVSTRNVLGTDHKNAADMQLCIDALEVLYTRPAIGTFVLVAGDRDYIPVLQHLRRQARQVKVVGFRESVSGDLLQMLGQEHFIDARELMPAERLQALEDHRTARLRLGQDLRRLREQGMVGVQSAAARQAAQDAAATTGGTPAEVAPSPVVPAPRPTPAARPNLMEQLLQEPPATFAPIRRITRDAERRCLEFLLEQVQRFGSQQGTPEIWASPFLRRLTDVLPELPDWERRQLLSQLRDAGAVRLEKREGEPHPFSVILVNYQHPDVRELNPGPVEEK

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Crispr_ID: NZ_CP014771_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_6

1593731-1593793

Orphan

Consensus_repeat	Method
CAAGGGCCAGCCCAACGGCGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_6

>merge|NZ_CP014771|6|1593731-1593793|CRISPRCasFinder
CAAGGGCCAGCCCAACGGCGCGGTGCGCGAGCTATATGCCAGCGGCCAGGCCGCCGCCGAGGT

>NZ_CP014771|6|5|1593731-1593793|CRISPRCasFinder
CAAGGGCCAGCCCAACGGCGCGGT	GCGCGAGCTATATGC
CAGCGGCCAGGCCGCCGCCGAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_157550305.1\|1602245_1604225_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP014771.1\|WP_082808648.1\|1584436_1585012_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|379295
NZ_CP014771.1\|WP_082808650.1\|1594965_1596951_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376615
NZ_CP014771.1\|WP_068336093.1\|1581819_1582710_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP014771.1\|WP_068343173.1\|1585941_1586466_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP014771.1\|WP_068336127.1\|1600528_1601026_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068336146.1\|1607391_1608234_-\|DUF4249-domain-containing-protein	unknown	unknown	gnl\|CDD\|379442
NZ_CP014771.1\|WP_071955220.1\|1601204_1602107_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_CP014771.1\|WP_157550304.1\|1599698_1600148_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068336103.1\|1586642_1588664_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP014771.1\|WP_068336138.1\|1604365_1605268_-\|DUF3078-domain-containing-protein	unknown	unknown	gnl\|CDD\|378621
NZ_CP014771.1\|WP_068343171.1\|1585479_1585932_+\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP014771.1\|WP_068336109.1\|1590836_1591883_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP014771.1\|WP_068336140.1\|1605495_1606638_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP014771.1\|WP_068336088.1\|1579411_1581631_-\|penicillin-amidase	unknown	unknown	gnl\|CDD\|376618
NZ_CP014771.1\|WP_068336120.1\|1596986_1599551_-\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078
NZ_CP014771.1\|WP_068336112.1\|1592003_1593185_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|215347
NZ_CP014771.1\|WP_082808990.1\|1606657_1607320_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238448
NZ_CP014771.1\|WP_068336106.1\|1589829_1590840_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238744
NZ_CP014771.1\|WP_068336096.1\|1582725_1584450_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_157550305.1\|1602245_1604225_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.23993e-56
NZ_CP014771.1\|WP_082808648.1\|1584436_1585012_-\|gluconate-2-dehydrogenase-subunit-3-family-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	1.18701e-30
NZ_CP014771.1\|WP_082808650.1\|1594965_1596951_+\|hypothetical-protein	gnl\|CDD\|376615	pfam01790, LGT, Prolipoprotein diacylglyceryl transferase.	1.81932e-06
NZ_CP014771.1\|WP_068336093.1\|1581819_1582710_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.48992e-20
NZ_CP014771.1\|WP_068343173.1\|1585941_1586466_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.73865e-09
NZ_CP014771.1\|WP_082808990.1\|1606657_1607320_-\|carbonic-anhydrase	gnl\|CDD\|238448	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	9.13102e-101
NZ_CP014771.1\|WP_068336146.1\|1607391_1608234_-\|DUF4249-domain-containing-protein	gnl\|CDD\|379442	pfam14054, DUF4249, Domain of unknown function (DUF4249). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 279 and 365 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	7.1282e-26
NZ_CP014771.1\|WP_071955220.1\|1601204_1602107_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	1.32289e-65
NZ_CP014771.1\|WP_068336103.1\|1586642_1588664_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP014771.1\|WP_068336138.1\|1604365_1605268_-\|DUF3078-domain-containing-protein	gnl\|CDD\|378621	pfam11276, DUF3078, Protein of unknown function (DUF3078). This bacterial family of proteins has no known function.	8.17762e-21
NZ_CP014771.1\|WP_068343171.1\|1585479_1585932_+\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	3.58062e-47
NZ_CP014771.1\|WP_068336109.1\|1590836_1591883_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	6.08075e-06
NZ_CP014771.1\|WP_068336140.1\|1605495_1606638_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	8.87042e-21
NZ_CP014771.1\|WP_068336088.1\|1579411_1581631_-\|penicillin-amidase	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	5.22514e-125
NZ_CP014771.1\|WP_068336120.1\|1596986_1599551_-\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP014771.1\|WP_068336112.1\|1592003_1593185_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|215347	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.	0
NZ_CP014771.1\|WP_068336106.1\|1589829_1590840_+\|VWA-domain-containing-protein	gnl\|CDD\|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	5.27474e-25
NZ_CP014771.1\|WP_068336096.1\|1582725_1584450_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.35422e-64

>NZ_CP014771.1|WP_068336112.1|1592003_1593185_+|acetyl-CoA-C-acyltransferase
MQVKEVVIVAAVRTPIGSFGGALASLSAVELGAIALKGALDKAGVAPELVEQVIMGNVISANLGQAPARQAAKRAGLPDTVECTTVNKVCASGSKAIMYGAQAIMLGQAEVILAGGMESMSNVPYYLDKARFGAKYGNGQMIDGLVRDGLWDPYHDYAMGNAADATAAHYGITREEQDAFARQSYERSAAAAQAGKKKEEIVPVTVTVRGKDTIVSDDEEYTKVQFEKMAGLKPAFTKTGTVTAANASTLNDGAAAVLLMSREKAAELGIKPLALIRGFADAEQAPEWFTTTPSLAIPKALKNAGLEAKDVDFYEINEAFSVVSLANNKLLNLEGSKVNVYGGAVSLGHPLGASGARIVTTLLSVLEQEGGKIGVTGICNGGGGASSIVLEKL
>NZ_CP014771.1|WP_068336109.1|1590836_1591883_+|tetratricopeptide-repeat-protein
MKISFVAMLFVLLGASLPGWDWLVRVREHNVAQTQAQAAAQRGQATEAAWLCARAVALAGRGGPAPALLLNQAQAQAQAGQTAGARATYGRLLSPAVPAAIGSAARQQLAGLLATEHQFSQAIGLLRQALRLDPTNAEARYNYELLSQYVAGQRPPSLPPPGSATPAGTPPDNQPKKDPTAPPGAGRSPTPAPTPGTDQPGEVPDSGPPPAGGSTGAPQPGPTGQPDRQRPTPQAGTNAGGGTKPGGAGPARPVPTGPAGGPRQGLDASNAALGKSAPAGQGHRPGTEAAPEANQQLQTQRERLKAMDLTPVQAQQLLDALRASEQQYLQQRPRPRSGTAPPPGQPTW
>NZ_CP014771.1|WP_068336106.1|1589829_1590840_+|VWA-domain-containing-protein
MLTWAYPDFWPAALGLAVLGLLLTLYTQRTARLGRRLGVGAARLAWKLPVRLLAGALLVLAWLGPALGVRQQAVRTAGQDVWLLVDVSRSMDAADVTPTRLLRTQAALRELAAAFPADRLGLIVFGAEAYVQCPLTYDQSALDLFLNTLSTKLTPPGPTTLRAPLDLLLSRLGPSGSPAAGTTGAAPPHATAAVLVSDGEDFGENLEPVLQALARTGARVFTVGVGTAAGGPVPAPGGKTPLRDARGGQVISRLREAPLLQIAAQTNAQYAALNDKENGLGTLVARLRTLPTPEASQLAGRTVAVADNRYRYPLGAALVLLLLDSLITVRVLRPDQ
>NZ_CP014771.1|WP_068336103.1|1586642_1588664_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MSEVVEKKAPADYSADSIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVWEVVDNSIDEALAGHCDLIQVTINENNSVTVRDNGRGIPVDWHAKEGRSALEVVLTVLHAGGKFDKDSYKVSGGLHGVGVSCVNALSIDLKVNVRRKGHLYEQEYSIGAPLYPVKEIGDTDEHGTEVQFLPDPSIFTETVYRYATIAGRLRDLSFLNKGIRITLTDRRDVLTGDAAVGHTDAEGFRYEEFYSTGGLRDFVLYLDGTERPSLLAEPIYVESEKGGVPVEVALQYNTSYQENVYSYVNNINTIEGGTHVAGFRSAVTRVLKNYGDKRQLFDKAKVDITGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSGAVNAAVGEILGQYLEENPGQANRIMDKVILAAKARIAARKAKDMVQRKNVLGSNSLPGKLADCSDSDPEVCELYLVEGDSAGGTAKMGRNRAFQAILPLRGKILNVEKAQEHKILENEEIKNMITALGVTFNERKSLAFGTDDDGNETGPLNFSKLRYHKVIIMTDADIDGSHIRTLILTFFFRYMRQLVDQGHIYIALPPLYLVKRGKEERYCWSEEERIMAQEEIGRGKPETVHVQRYKGLGEMNAEQLWTTTMQPATRSLKQVTVDSAAEADHLFSMLMGDEVAPRRDFIEQNAKYAKLDV
>NZ_CP014771.1|WP_068343173.1|1585941_1586466_-|GNAT-family-N-acetyltransferase
MHQLHLLNSTLADVDEIFRLYQVATDYQKTKPNSVIWLGFERSLVEQEIREKRQWKLLINGVIACVWATTDDDPEIWEERNADPAVYIHRIATNPDFRGQDLVAKIVTWAISYARQNGKKYVRLDTVGDNQGLIRHYTSCGFTYLGLVKLKNTAALPTHYQNSTVSLFELPVGG
>NZ_CP014771.1|WP_068343171.1|1585479_1585932_+|nucleoside-deaminase
MREAIRLSLSNMQAGFGGPFGAVVVKDGQIIARGFNQVTSTNDPTCHAEVDAIRKACQVLGSFQLDGCDLYTSCEPCPMCLGAIYWARPARVFYANTKADAAAIGFDDQFIYDEIEKPLAERTLPIQQLLREEALVSFEAWAAKTRKTAY
>NZ_CP014771.1|WP_082808648.1|1584436_1585012_-|gluconate-2-dehydrogenase-subunit-3-family-protein
MINRRLAVRHLTILAGAAALLPGCLSQSQEEQKASYPLRHVAMSAGQEKLLAEVCETLIPTTSTPGAKELSLNLYVLKMLDDCTPAKDQQIFMAGLGKFDEAAQKQLGQSFEASPAVQRAALLQRIDQQPQAFPEEVVAFYRAARQLAIDGYTGSKYFMTKQVVYELIPGRYDGYFPVSKVDLSKPHHGQS
>NZ_CP014771.1|WP_068336096.1|1582725_1584450_-|GMC-family-oxidoreductase
MANLNIDSIKARTFDAIVIGSGMSGGWAAKELTGKGLKTLVVERGRDVKHNIDYPTTNLNPWEFPHGGKVPQDIQEANPIASRCYVFKEDAMHFVVKDAEHPYVQEKPFDWIRGYQVGGRSLLWARQTQRWSTYDFEGPARDGFAVPWPIGYDDMAPWYSHVEKFAGISGNRDGLPALPDGEFMPGFPLNAVEDHFRLQLKKSHPDRHVISARCAHLSKPQPIHYEQGRVQCQNRVLCQRGCPFGGYFSSNSSTIPWALKSGHLTLTPNQVVESILYDELKGRAAGIRVIDTHTKATTECYAPVLFVNAGALNTNLLLLNSTSGRFPNGLGNDSGVLGKYVAFHNYSARVFAEFEGLKEFTTDGRNPAGGGYLPRFRNVFKQETDFLRGYATSFGASRGLVRPAQGFGADLKQQLERPALGPWHVSAGMMGETIPKATNYVRLDPTRKDEWGMPLLSISVAYDDNDARMKQDFFEQFTDMFTKAGFTNIKSQDSHQAPGLDIHEMGGVRMGLDPKTSMLNKWHQLHACPNVYVTDGAAMTSTSTQNPSLTYMAFAARAVDHAVSELKKQNLKTS
>NZ_CP014771.1|WP_068336093.1|1581819_1582710_-|sugar-phosphate-isomerase/epimerase
MTQRRDFLKQAGLFSAAALVRPVLLRAAPAPLKIGLQLYSLRETIGQDVKGTLAKVAQAGYQEVETYGYSPEKYFWGLTPGEFRAALAANGLSTSSGHYDLGGFMSDGNEQQLQTAIAAAKGCGQTYVIVPYLDEKLRTSVADFKTVATRLNKAGALCKAAGLKLGYHNHDFEFKPIGGTALYDVLLRETDPKLVDFEMDIYWVVRAGQDPIKLMQAHPRRFPLWHVKDMDKAKPELNTEVGAGSIDFRKIFAQAGTAGLQHIFMEQENFGMDAYQSIAQSAAYMKKTLLPALRRG
>NZ_CP014771.1|WP_068336088.1|1579411_1581631_-|penicillin-amidase
MQKLCTLFLLLAAGAAHAQAFTPAEVARWRQQAQRVTIVRDTWGVPHITGKTDADAVFGLLYAQCEDDFARVEDNYLTALGRQAEVRGEAALYEDLRQRLFLDSARAVGIYGRGPRWMKDLLHAFADGTNYYLATHPTVRPRLLHRFQPWMPLLFSEGSIGGNVSVVPLERLKAFYSAQKGTSYQAPAPAETRLAFEKSEDEPTGSNGFAIGTSKSASGHPLLLINPHTSFYFRSEVQMTSAAGLNAYGAVTWGQFFIYQGFNATCGWMHTSSQADSMDEYLETVSEQDGKFFYQYEGQQVPLPTDTLSLVYLKDGQRQRRRFTTYRTPHGPVVGKVGDKWVTVKMMDTPLAALEQSYLRTKAHDYAGFQQVMRLNGNASNNTVFADNQGTIAYWHGNFMPRRPAGYDYAQPVDGSTKATEWQGLHPVEDLVQVKNPASGFIQNCNSTPFTVAGEGSSPDKKQYPAYMAPDADNYRALNAVRVLSRKKAFTLDTLIAAADDPHLLGFEKLLPSLVRDCQLLLDEPGGSLPPGVEAALPVLRRWNLRYDTTSVAQTVAIYWGERIQRLARPRVPAGQPMDYISFTQFIIEHTTPDEKATALSETLAELTRDFGKWQIPWGEINRYQRLTGRIDETFSDQQPSRPVAFCSSAWGSLAAFGAHTYPGTKRRYGGVGNSFVAVVEFGPRVVARSVVTGGASSHPASPHFTDQAPLYCTGQFKDVWFYPEDVAKHVEKQYQPGQ
>NZ_CP014771.1|WP_082808650.1|1594965_1596951_+|hypothetical-protein
MGTYTYVLPTLPATVGGWPAYAVFYLFGFGLAGGLLVARGGRRGYPWQPWLLLVAGTVLAFVAGTRVAAGTAADWHAVLAHGHWGSGAALGRTVLGGMAAAVLVLAGLRRWLGFGREATDAFALPLVLGLAVQGVGCLLAGCCYGTPLGAGLGLGICYPAGTGPWATQVAHGLLPATAAVSLPVHAAPVYQVLLCLCIAGVLVAKRRQLARRSGLALPLPLALGAFAAGRFGLEFGRDPWSDVLGAGLWYGLKPVQWGLAAAALALLAVAVWRSRLINSSETTTYDNLTSPTPPPVPNQPLANLVLVLALLALPPWLLPGQLTVAETLVLRALLLPVLALEALRWGRALRLSNPLPAALLALGFGLMSQAPAPTAAPAGAFAEPARALTLSGGGLTGSSYQLYQDYSTCSTPQANITTFPGYHQRYNVGALGVAYSQQLGSEGSKRLTAGLTGFLGRTSFDPPAGLVVQGGQFGDSTYVADPATSRRLFDVNPYLEYAAVGSKSRGKNLRHSYMRFGLGLHLSSARAYDYVVEPGRARGAGVGVLAEYGVDRVVWLHLSNAYGPDAVGNGLFRAGLGTGFGHDRLTLLGGITVANSNTYSTNFLAFFLLGQPSYTAPGGYFLQARWQATPAWLLEGSATSNFNDMSQLTLGTRYRLPLGGR
>NZ_CP014771.1|WP_068336120.1|1596986_1599551_-|type-IA-DNA-topoisomerase
MKVCLAEKPSVAREIAQVIGADRRMDGYYEGNGYQVTWTFGHFCQLKEPDDYRPEWKRWNLHDLPMIPEQFGIKLMRRDEGVVKQFNTIKRLLDAATEVINCGDAGQEGEVIQRWVIHEAKCRKPVKRLWISSLTEEAIRQGFNNLRDGKEFDSLYQAGRSRAVGDWLLGLNATRLFTLKYTTYQDKQLLSIGRVQTPTLALLVDRYHEIRNFKPEPYWVLKTQYRDTTFTRINTEAEQKQAQDAPDEQSRLRALGYFVKEDEANQALEAVKPAPLTVTNVEIKKGRESPPRLFDLTSLQVQCNNQLSLSAEDTLKIVQALYEKKAVSYPRVDTTFLPDDIYPKIPGILRGIGYQNLTGPLLANKIPKTTKVFNNNKVTDHHAIIPTGSGGPSGGMESSVYDIIVRRFIAAFYPDCEVSNTTVLAEAAEYLFRVRGRQILSPGWRVVYGDPAQQTAPKPTPPVGASATGAEDNDDVVSTVLPSFAKGESGPHQPRLESKMTQPPKDYTEASLLRGMETAGRNIDDEELRLAMKESGIGRPSTRAAIIETLFKRNYVRRDKKRLLPTPTGVELIGLIKNPTLKSAELTGQWEQKLRQIERNELPSDQFLEELKGLVREMVQEVKTDRSGRAVSGGSPTPPAAGGSQGAASGAQKPAVSGQKAGSQAAATTSLGNCPACKTGHILRGKSAFGCARFREGCQFRLPIEILGKKLSDPQVKSLLAKGRTQLIKGFVTGAGEKLDGALTLDKNLQPELVPAAESKPTTATDPGQIPCPVCKLGTMLKGSSAFGCSRFREDCQFRVPFEWGGKKLTDTQLRQLLRRGETGVIKGFLSAKTGKKYDAALKIDEGRVVPVFA
>NZ_CP014771.1|WP_157550304.1|1599698_1600148_-|hypothetical-protein
MILRSYYPLLLAVLLLPGRLLAQRPPQTFNSPGHTEPDQELDGFSGKFKSIHLISASVRGVRAAGQIVYWVSADRRRLSAFRAGSLLWCTDVVAPFQAEIPAVRIHSLVLSSELLFVSLGRRGLAEIDRKSGHVAGRYFDRDPNNLRAE
>NZ_CP014771.1|WP_068336127.1|1600528_1601026_-|hypothetical-protein
MKYFFLLIGLLLAFRPVAAQQSRQPAPPDSLGALLPTPPAASDTVAALHRLFAAKRQTQSYVVAGTTLAVLAGVIIVAMQPEEHGGSGGGFALSSGPMFSSADQAGLVAGFLGVPILTTELLVYGSFSRRNEAQALADFRAHQLSKYLRRKLKAKYFNQKLEPSF
>NZ_CP014771.1|WP_071955220.1|1601204_1602107_-|EamA-family-transporter
MKPSRPLLIAAFAAVYVLWGSTYLAIKYAVATMPPFLMAGSRFVLAGGILALAGRASATYERPTLAQWRTSALVGALLLAGGNGLVVLSERALPSSLAALLIASEPFWIVLLGWWWLGQERPSGRVVLGLLLGFAGVYLLVGEQLAAGSGRAQLVGVGLVLLGAFSWAAGSIYGLRAPRPRSPVLASGMQMLCGGALLLLLGTATGEWHGLRPGQFGTAAWLGWGFLVVFGSLVAFTAYSWLLQHAPPARVATYAYVNPVVAVLLGWALLHEALTAQMLAGAAIIVGSVVLITTHQKKEG
>NZ_CP014771.1|WP_157550305.1|1602245_1604225_-|TonB-dependent-receptor
MPRFLLIAASVALPLAARAQQLTVPADTTRRLGEVTVYATRLGQLAGQTGRYVTVVPGSTLSRYPVASLDDLLRLLPNIEIQGRGSFGTQSDITLRGSTFNQVLILLDGMRLNDPLTGHFNGYFPITPAEIEQIEVVRGPGAALYGPDAVGGFINIVTKTFAATHRPDGTELAGTFLAGEYGLKSTNAGFYGQDHGLRLAGGILNNTASGQLLDLPGGGRNDFKLNTYSLSGAYQLTEKFSAAARASFDRRDYNAQNFYTTNSGDRARETTTRDWYQGQLRYEWNERARTELSIVGTSSTDYYVYTPTTAASDHLMHYLNVQGQHQLQLSDKLRMTLGGQADRRAVQSNDRGDHAVWHAGAFAVAALTPSPGLNITAALRLDHDQNYGTEVVPQLNASQQVGEKLTVRGAVGRGIRAPNFTEQYNSAIRPGVVPSGFNVGNPGLSAERTWNYEAGLDYQPRPALTLRGTYFNRYGRNLIDYVAASGSQTMETTGFTNLSSSATYRLAENLFAVTTQGIETEVTSRARLADNLRLDGSVGYTWVHLGVAGDVQSQYLSNVARHLVSGNVSLVHQRFTLSVGGLYKVRAAQQTTPSVTTNLAVLTPSYAVFNARLELALLPERVWLVGQAQNLFNAHYSDLLGAPMPTRWLMAGVRVGLKR
>NZ_CP014771.1|WP_068336138.1|1604365_1605268_-|DUF3078-domain-containing-protein
MKNLFLSGLLACGSLLARAQAPAPTPADTSYWRTSLKAGVNLNEAVISDNWKGGGATSLGLSTLFNAQAHYLRGKRSWDNEADFLYAGQYTRGQGYRKTNDRLWLDTKYGHALSPQWDAFASLNLLSQFAPGYDYSGDAPRLVSSFLAPAYLTNAYGFEFHPNKRFALRLSPFAPRLTIVREMSRFQTLPTDVVYGVNPGYTTRWEILAAQILATLDQPLGPNANFKARYLLFTNYGSFRAQDINQRLDLTITAKVYGLLSVNFQSTVLYQHDQDANIQFSQGLGLGLLLTRQNPKVPPK
>NZ_CP014771.1|WP_068336140.1|1605495_1606638_+|acyltransferase
MSPTLPASARAPRAYYPALTGLRAVTCLMVFSKHFRPADTPEWANLIIEQFHMTMSMFFLLSGFVMATRYQADVEFTRPWWRRYLWRRVARVYPIYLLLNTSVLIHVYWPVPAGQAGHTALLVFLSETLLRGFSSTLKYVGLPQAWSLTAEECFYFSLPLLLVLWRRYGYRGAAAFAGSVLAIGLGLTAVCRGHEALHGFFGSFHHLFNFTFFGRVLEFTMGVGLARWWGGRPTASRPGWPWRTTLSLALMLAGGVVLVWLNSPFDWYDGNLKPATILLNVVFYPLCMTLLLAGLLLEGSWLRTVLGSRLLDVLGKRSYSFYLMQIGLLSIWWRAEFGWRQHVGWQLLVTMVLSEVLYRLVEEPARRWILARTLPRGEWS
>NZ_CP014771.1|WP_082808990.1|1606657_1607320_-|carbonic-anhydrase
MQDILANNQRWVAERNAEDPDFFKRLVNGQQPRYLFIGCSDSRVPSSNITGTGPGEMFVHRNIANLVVHSDMNLLSVLQYAVEVLGVQDILVVGHYGCGGVAAAAANKQYGLIDNWLVNIRDVVRLHETELLRIPDETQRLRRLVELNVTEQVRNLAKTNIIQNALRGDNPPRLHGLVYDIADGVLKDLNVDGETVTHDLAHIYGTKAMPDDELDKENPA
>NZ_CP014771.1|WP_068336146.1|1607391_1608234_-|DUF4249-domain-containing-protein
MKNNFLPRLLAGAALLAAASCQKVVTLNLKDATPQLIIEANLADDGHPCAVQLSQSVDFTQTNTFPPVRGAVITLSDDAGHSETIAETSVPGQYRGSTVLGQPGRRYTLRVQASGQSYVAASTLPGPVVPFTGLHAQKSNFGNNIQLVPEYQDPAGMPNFYLFRQYRNGLLNPAIFLQNDEFTDGKANTRGLGGGGGGGGNNGNNNTDVNKLATGDSVRVEMQNVDSTTYNYFRTLNLLLQNNPLLSTAPANPKTNFSGGAQGYFNAHSRRQRTLLVPAL

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Crispr_ID: NZ_CP014771_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_7

2650913-2651000

Orphan

Consensus_repeat	Method
GCGAGCGCAGCGCGGCAATCGCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_7

>merge|NZ_CP014771|7|2650913-2651000|CRISPRCasFinder
GCGAGCGCAGCGCGGCAATCGCACCTGATTCTTATCGGACTTACGCAAAAGATGTTTGTCATTGCGAGCGAAGCGCGGCAATCGCACC

>NZ_CP014771|7|6|2650913-2651000|CRISPRCasFinder
GCGAGCGCAGCGCGGCAATCGCACC	TGATTCTTATCGGACTTACGCAAAAGATGTTTGTCATT
GCGAGCGAAGCGCGGCAATCGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068338081.1\|2644035_2644965_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP014771.1\|WP_157550397.1\|2648812_2648974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068338078.1\|2641601_2643188_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP014771.1\|WP_071955353.1\|2646951_2648175_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP014771.1\|WP_068338092.1\|2649076_2649568_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NZ_CP014771.1\|WP_068338105.1\|2656843_2657299_+\|Hpt-domain-containing-protein	unknown	unknown	gnl\|CDD\|225108
NZ_CP014771.1\|WP_068338107.1\|2658347_2659592_+\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|223730
NZ_CP014771.1\|WP_068338089.1\|2648171_2648756_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068338083.1\|2645124_2646411_+\|sorbosone-dehydrogenase	unknown	unknown	gnl\|CDD\|225044
NZ_CP014771.1\|WP_068338097.1\|2651761_2653495_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP014771.1\|WP_157550398.1\|2651087_2651297_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223131
NZ_CP014771.1\|WP_068338095.1\|2649668_2650871_-\|amine-oxidase	unknown	unknown	unknown
NZ_CP014771.1\|WP_068338101.1\|2654426_2656175_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP014771.1\|WP_068338103.1\|2656230_2656434_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068338106.1\|2657301_2658204_-\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP014771.1\|WP_068338079.1\|2643206_2643848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_157550399.1\|2651549_2651714_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068338109.1\|2659898_2663042_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP014771.1\|WP_071955754.1\|2653606_2654269_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP014771.1\|WP_068338085.1\|2646410_2646866_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068338081.1\|2644035_2644965_+\|hypothetical-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	7.84849e-10
NZ_CP014771.1\|WP_157550398.1\|2651087_2651297_-\|hypothetical-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	5.54044e-10
NZ_CP014771.1\|WP_068338078.1\|2641601_2643188_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.37212e-14
NZ_CP014771.1\|WP_071955353.1\|2646951_2648175_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.25215e-13
NZ_CP014771.1\|WP_068338092.1\|2649076_2649568_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	2.88402e-48
NZ_CP014771.1\|WP_068338105.1\|2656843_2657299_+\|Hpt-domain-containing-protein	gnl\|CDD\|225108	COG2198, ArcB, FOG: HPt domain [Signal transduction mechanisms].	0.000820597
NZ_CP014771.1\|WP_068338107.1\|2658347_2659592_+\|carboxylesterase-family-protein	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	7.17082e-08
NZ_CP014771.1\|WP_068338083.1\|2645124_2646411_+\|sorbosone-dehydrogenase	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	3.48241e-41
NZ_CP014771.1\|WP_068338097.1\|2651761_2653495_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.89396e-35
NZ_CP014771.1\|WP_068338101.1\|2654426_2656175_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	8.30685e-11
NZ_CP014771.1\|WP_068338106.1\|2657301_2658204_-\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	6.64672e-97
NZ_CP014771.1\|WP_071955754.1\|2653606_2654269_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.32221e-50
NZ_CP014771.1\|WP_068338109.1\|2659898_2663042_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	5.2338e-149
NZ_CP014771.1\|WP_068338085.1\|2646410_2646866_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	7.39838e-09

>NZ_CP014771.1|WP_068338095.1|2649668_2650871_-|amine-oxidase
MKNPVTDNPFDSFWWGGYECTDQLNAFGNRVDFLPLTGHLQLLDEDYTGLKQFNIKTVREGIRWAQIEKTPYHYDFSTVKTMLKAGQRHGIQQVWDLCHFGYPDDLTPLHPMFARRFAALCRAFVDFYRAERPEGTLIVTPINEVSFMSWLGGDARGTSPYCVGQGWEVKLGLMRAYIEGSWALREADPSIRLLSTEPLVNIVAPPNPWVSHQREARRAHRNQFQATDILSGRLCPELGGHESLLDIVGFNYYYDNQWQLHPHRHLGWNDPAMDPRWVPLHELLAQAHKRYKRPFVITETSHPGEDRPLWWQMIGRECAQALSAGLPLLGVCLYPIIDRPDWDHLDQWHRSGLWDAELVAGGPPRRHLHHASAEALLQAQTMVRQAQAQVKPRRQRLLVS
>NZ_CP014771.1|WP_068338092.1|2649076_2649568_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MPATAHLYSPIGMMALHGSDAGLHAVQFSDHEAPTPTAPADLPECLREPHRQLKAYFSRELRDFDLACAPLEGTAFQRQVWAALVGISHGRTASYLDVAKLLNNPKSVRAVGAANGQNPLAIVWPCHRVIGADGSLTGYAGGLLRKRWLLDFERPEHQGALFG
>NZ_CP014771.1|WP_157550397.1|2648812_2648974_+|hypothetical-protein
MRAGCCRFSPHFQVIDGNKKAVGDGFDVTSPMPGPCIRQLSPCLLIDHIGPGG
>NZ_CP014771.1|WP_068338089.1|2648171_2648756_+|hypothetical-protein
MIDRIVAAYPRKEQAVCITALSHPVFHVYDPLSSDESGAAERLPSTFRLGPDKEDRELTVRNETSQPVHLVAIDCCLFTSDDPSRCDCALVQDETIHFVEFKHGKYARRTERIRDCIRQLANSINDFYNAGILPPQHTVLAIACVGFTEGSPPQNASLEALQARINLRVPDDIVVELRVTDTTLFGPSAAAEAQ
>NZ_CP014771.1|WP_071955353.1|2646951_2648175_+|AAA-family-ATPase
MNEQLIVKNFGPIKDATVDFKRVTVFIGPTGGGKSTLAKLAAIMRERVLFSNDSKKQYGVLNEFLYNYEINNYSHTGSEFHWRVEDSGRFDRLDASEEAVIVHLDLFPQLGSEEEYVTNKLKDIIDNSKADNSNELEASAIYNFTQKFSTEFDRLTVSWYNRRFPKTIYVPADRMFVSAALKGLSSVGFQNTSLSKPILDFLEAFSASKQRIIKFPIKFLDILYESDGGDGKVKTPDATLYLHESASGIQSVVPMLSVILDKLYWNSISFNPDTFNFIIEEPELNLYPTAQQGLLNWLVEKCTKGDNDLTITTHSPYILSHLNLLLYAYQVAEKHPDRKEAVAAIVPEASWINPKKFACYHVGGGGVKSLVDEEMGLIDTNELDGLSGDAADAFDNLIRLSKGFAIK
>NZ_CP014771.1|WP_068338085.1|2646410_2646866_+|cytochrome-c
MTSKQALLTLALVGGALSLHAQHRPTPAAKAKAATKADPALAASLTRGAVVYKNVCITCHMADGGGVPNMNPPLIKTEYVLGDKARLAHIVLAGLAEPLEIDGNDYKQHMPAQAYLTDQQVADVLTYVRNKFGNKASAVQVAEVKAVRAKL
>NZ_CP014771.1|WP_068338083.1|2645124_2646411_+|sorbosone-dehydrogenase
MISFSPRLLLAVPVLAGSLALVASHPTGVRVAPDPNNAGLKLPAGFGALVAAETGGKARHITVTPQGVIYVKLNKVKDGKGILELHSQPGGKATVTGGFGDYGGTGMYEKNGYLYASSDHAVYRYKLDGKGEVIDRSKPELLVRGLKVGSQHESKSIVLDNADNLYVNIGAYANACQEQDRTRGSKGIPNCPILDSAGGIWQFKADKLNQRYPDGTRFATGLRNVVGLDWNSQDKQLFVMQHGRDQLHDNWPELYGDKESAALPAECMYALTKGSNAGWPYIYYDQQKKELMKGPEYGGDGKTPSTADYLQPAAAYPGHMAPNALLFYTGTMFPAKYRNGAFIAFHGSWNRAPEPQKGYFVVFQPFKDGKPAGEWEVFADNFAGSPEKAASGRADHRPCGLAQGPDGSLYVSDDQKGTIYRIVYNAKN
>NZ_CP014771.1|WP_068338081.1|2644035_2644965_+|hypothetical-protein
MAYALATRFLFDADGFFQLFNSSLLSLAFLVVMPLGLGAITAHFTPQTASAWWRLAWAPLLAVLCFLLAALLFHLEGLICVLIISPLFLFVSWLGAIIYARIADPLPQKRDKALVVAAFALLPFIAGPLENYLNNPDDFRRVENSVEINAPAAVVWQHIIRVAPIRAADLGPSIIDDIGFPRPVEATLSHEGVGGVRHATFERGVEFIETVDDWQPLRRLSFSIVPNTATIPPTTFDEHVIVGGRFFDVLRGTYELHPAGPGRTRLVLHSQQRLSTHLNWYAGLWTSFVMREIQQRILVVLKQRCENVG
>NZ_CP014771.1|WP_068338079.1|2643206_2643848_+|hypothetical-protein
MRRITFTLLTDGSSDRCLLPHIQWAIAEALAGESYQLDAQWADLRGLPQASTELADRIRLAVELYPCDLLLIHRDSESQPYAKRETEITAALGELSASALPVSARLVPVRMQETWLLVDEQAIRVAAGNPKGRVALAIPRIGTLETLPNPKVILHTALRAASELSARRLHRFNPEARAFQVGDSITDFTPLRQLPSFQRFSVELRQALAAVKR
>NZ_CP014771.1|WP_068338078.1|2641601_2643188_+|AAA-family-ATPase
MLTRLEVTNFKNLVGIDVRFGAFTCIAGANGVGKSNLFDAIRFLSLLTDLPILDAVMSMRDEGNRSSDLRTLFHKAGDYYADTMTFAAEMIIPQDGVDDLGQVARAAITFVRYELHIRYREADAYNPSGSLEIIREELRPLGIAEARKNLAFPHSVAFRKSAVTGLRRNGTAFISTVMEDDQCTIQIHQDGGSSGRPQRRLATKLPRTVLSVTNATEHPTALLAKREMQSWQFLQMEPTALRRPDELNLSAASHIAANGGHLPATLFRLASQELVQEDSFDGTRLALDGPVQAGVFSRIARRLNELIEDVREIFVDRDDKRQLLVLKVKLKDGTELPARSLSDGTLRFLALAVLEQDSQAQGLLCLEEPENGIHPARIAAMLRLLNDIACDTTLAIGPDNPLRQVIINTHAPAVVQEVDDDSLVLADTVGVHQAATATQPASSYRILSLSCLSDTWRGNEARREATPAEKPMATLARGKLVRYLDPVLPETATPQLADSMSAAARRRVRVIDRPDIQALKGTQTILAL
>NZ_CP014771.1|WP_157550398.1|2651087_2651297_-|hypothetical-protein
MAASSSSKLARCGGMAANVALASRKLVAAYFTGSSARLAEGIHSLVDTGNGGRPRYGLPRSQRPAEESF
>NZ_CP014771.1|WP_157550399.1|2651549_2651714_+|hypothetical-protein
MRYPLLFGWLWPLALGAALARPPAPPPDTLRLRATNDGPGFLTLPIALTPPRSP
>NZ_CP014771.1|WP_068338097.1|2651761_2653495_+|hypothetical-protein
MPTGRVFQAGFTRDRLWLRATVVNTLPQRTRFVWSLYAFVDSAALFVQPGGRGPAHFVAGTSGRVVAVARGFPARASCLPFWLEAHERAVVYVAVENRTGATYLPTDLTTAEDFLAYEQAFFFTKRWTWLLGLYLGSALLSVVLFAFLRDRLYLWYGAYILFATWFLVMEDGLDAWLVPQPLYTLGWRLGQYSLLLLALACQLRVLSRFMRLRQSWPRLHRLSWGLSGLAACAALAYGLLARPAARAGEGSMAALNSSREVVLWVVLVGGGLLLLAIGWRGRRVQRRLAGYYGLTYACFFLGSLNFLLNRSGMVNIHVVNPNALAWGLALELLLLSVLLTARFRQAQRQNTDQRLRRLHERAAAGQHLIGAQDEEREALARELHDALAPGLTALHLAWQGRAVREALAHGPPALAEAHAHSAALLRQLRYDVRTLSHALLPAPPGAPLPLPAAVTLLADTLSLTDDGPHISCHCDAAAAALPPAVQQAAYRIVAELLHNALRHAQARHVQVAVRRLPTTLRLTVEDDGRGFDPLVPLPPRGGLGLRGVQARTGYLRGQVQVRSQPGQGTSIMVELPI
>NZ_CP014771.1|WP_071955754.1|2653606_2654269_+|response-regulator-transcription-factor
MPCRLLLVDDHPALTRGLAALFSQEPDLEVCGQFASGEALLAHLEAGPTPTANLLLLDLHLPPPHDGLSLLPQLRRQWPGLRVLVFSSATSPMLVAQVAAAGVQGFLDKSAEAGALLAAIRAVHTGQLVFPARVRLRAPLPGPPAGPGQVDAEALLRLRQLSAREREIIGLVREGLSTRAIAARLSLAELTVSTHRRNLMHKLSVHGLAELVRFAHEHGL
>NZ_CP014771.1|WP_068338101.1|2654426_2656175_+|hypothetical-protein
MKTNNTPRRGRVAACLLPGLWLLAGAAQPAAAQGWLGLAQSNYGGTNSAYLNPSALADSRLRAYLNLGGADASFYNTYLRLNLPQKPWESGFSFKKDYLVEQDGRSGPQFASATAEVRLPAFMLTLGPRSAIAFSSRVRGFAQASGVSYSLAQLARYGLGQADQLGLANQLLTDNSFNLEASAYHEFALTYARTFTLNTTHFFKGGLTLKYLVGLGGGYVRNDGVQFKVLDKNSIELQSSQLSYGLTDYKLYGQNGFTAGSLYGDQQLGRGYGADLGLTYEWRPDYRRYNYHMDGQDRPDNSRNKYRLRLGLALTDLGAIVYNDGQHVRQGQLANTATVRLTQLDTLKFRTLQSVENTARSLVGLSSTSREFTTYLPAALRFTADYQVAGHFYAGLLWTQSLLPARSLGSHTASLLALTPRFEFSRAELALPVVWANGYRQLQVGAMVRLGPLVLGSDNLGGLLGLSTATGADVYFGLALALRRHRRSDKDGDGVSNRYDKCPKEKGTWATHGCPAPAPPPTPAEAAPPTPPVPAEAPAPTETPTPAPTETPTPAPTETPAPAPSTAPAPAEVPPTPLPSPN
>NZ_CP014771.1|WP_068338103.1|2656230_2656434_+|hypothetical-protein
MNKFLTLVFLGLLLVILHFSTQTTRRAATARRAVPASYAGLPATAFPKGHKTLDSYRSRRVLVANQR
>NZ_CP014771.1|WP_068338105.1|2656843_2657299_+|Hpt-domain-containing-protein
MKILPSLAAGFAGAIALTALHETARRLRPQDAPRMDVLGERGLRKILRLEDLPQPDHTTIYSATMLGDVLSNTLYYTLAGSGKHSLGRGIALGALAGVGGVVLPGPMGLGTAPSNRTPQTQAMTVAWYTVGGLVAGLVAQGLRQRRQKRRK
>NZ_CP014771.1|WP_068338106.1|2657301_2658204_-|LD-carboxypeptidase
MSAIAPPFLRPGQRVALVAPARKISAAEVELAVQTLRGWGLDVVLGESIGAAHHQFAGDDELRRRDFQRQLDDPAVRAILCARGGYGTARLVDELDFRHFAEHPKWIAGFSDITVLNSHLLRLGYQSIHGVMPVLYGQAGGEAAVESLRRALFGEALACQAPPYPLNRPGTATGELVGGNLSLLHTSTGTTSQASFAGRILFLEDLDEYLYHLDRMLLHLHRSGQLVGLAGLVVGHFSAIKDNAVPFGQTAHEIINHYAQRYSFPVGYGFPVGHEADNQALVVGRPATFTVDKGGGSLSQ
>NZ_CP014771.1|WP_068338107.1|2658347_2659592_+|carboxylesterase-family-protein
MKPLFRILVALLVLAAPGLASAQLAPIDTTGGRYYQPVFANVTVTSNVAYGSATTYAGTTQQLLLDIYQPTGDTVKRRPLIIFAHQGGFLVGSRTDAYMVNICTRMARLGYVTASIEYRLGFPLTGVAAPADTAGLAQAAIRGMQDMRAAVRFFRNDAATAQTYRVFSSYIIVGGSSAGAFAALETGYLDKPSEVPAYVGLAALGGIEGTGGNAAYSSAVAAVLSLSGATESPSIIEAGNAPLCSVHGTADRTVPYFQGKIGSFLPPKYVYGSGRLNPRATAVGIRNTLRTLKGAGHIPFESNATYADTTFWTIRDFLRPILRLTGTALAARPASAATLPIAQAYPIPAREFVQLALPPTWRELGDADLLDMTGRVVRRLTPTAQSWQVPRGALAAGIYSLRFAGQVPVRVVFE
>NZ_CP014771.1|WP_068338109.1|2659898_2663042_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKRNLLMTFLFMVTLFQVVLAQTRAVSGRVTDQKTGEGLPGVTVLVKGTTNGTSTDAEGSFKLTVPQAGATLVFSSIGMNSVERPVGSETTFKVQLSANARELSEVVVTALGIQKDKRTLGYATQEIQGGAVAQKSEPNVLNALQGKVSGVNITGASGLAGTSTNINIRGITSLTGNNQPLFVVDGIPVSNDTDRTNGGAAGTLYGAQTANRAADIDPNNIANISILKGPAAAALYGSRASSGAILITTKSGADVNKKLEVVLTTGYNFQHVMGLPAFQNDYGQGTNGVITTASGAGNILTGSTNSWGPRFGTTPTFANGLLLANNTNLPYQSYSDNISSFYKLGSLWTNGVQLAGNNGTSNFSLNVNSTAQKGIVESSNLQRTNVQLGGGTTLQNKIRLRGSVNFSQTNQLAPQTGNGGSAFGSLSSVPRSFDLQNQVFQTATGGNLFFAGLDNPTWNLENNNTSSNVTRFINVVSIGYDFFPWLSVTYRAGLDAYTDRRKQIAAITSSRNPTGLIFQDNIQYAEFTGDLLVTAKKENIFVNKLNANLLVGQQTNQRRRNEQYVSAATLSQPGFYNTINAANFTGSGETNYTRRLLGYYADLSLAYNNYLFLEGTARVDRSSTLPTANNTYLYPSISAGFVFTDAFNISSDFFSYGKLRGNVARVGRDADPYVLDTYYVSGGQGNNVANVTFPFNGVVGFKPSATLGGGQTLKPEFTKSAEVGMNLGFFNNRLTLDATYFKTVSSNQILPVTLAGSTGYTSFYTNAGELDNKGIELLGMLSAVRSTSGFTWDISANYTRIRNVVVSIYPGVKSSSILGSSFIGSVPSYVVGQPYGVILGQKKATAPDGQYIINPKTGLWATEQSAQVTANPNVNWQGGITNTLAYKGVTLSFLIDAIVGGDILSFTQAAYKSAGMLKETGVARDQPRVIPGVIQNADGTFRPNNIQVDAQSYWSNQGLQSDLNIFDGTHYTLREVSLSYALPKSLLGNSPFGSASLTLSGRNLFYYAPNANFFPEVNTQGAGNIRSLDLQGPPSVRSYGAYLRFSF

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Crispr_ID: NZ_CP014771_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_8

2846992-2847066

Orphan

Consensus_repeat	Method
GAGGACAAGCCCCGCACCCTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_8

>merge|NZ_CP014771|8|2846992-2847066|CRISPRCasFinder
GAGGACAAGCCCCGCACCCTACCCCATTCTTCAACCTGTTCAACGACGGGCGGGGACAAGCCCCGCACCCTACCC

>NZ_CP014771|8|7|2846992-2847066|CRISPRCasFinder
GAGGACAAGCCCCGCACCCTACCC	CATTCTTCAACCTGTTCAACGACGGGC
GGGGACAAGCCCCGCACCCTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068338379.1\|2851919_2852918_-\|gliding-motility-protein-GldN	unknown	unknown	gnl\|CDD\|274628
NZ_CP014771.1\|WP_068338393.1\|2856737_2857736_-\|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl\|CDD\|274625
NZ_CP014771.1\|WP_082808770.1\|2858797_2860009_-\|DUF4271-domain-containing-protein	unknown	unknown	gnl\|CDD\|379465
NZ_CP014771.1\|WP_068338373.1\|2843366_2843603_-\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP014771.1\|WP_068338364.1\|2834740_2835988_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_082808769.1\|2836015_2837644_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP014771.1\|WP_068338359.1\|2832731_2832992_-\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|349414
NZ_CP014771.1\|WP_068338384.1\|2855479_2856496_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|274632
NZ_CP014771.1\|WP_068338375.1\|2843786_2846876_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP014771.1\|WP_068338381.1\|2852953_2854537_-\|gliding-motility-protein-GldM	unknown	unknown	gnl\|CDD\|274624
NZ_CP014771.1\|WP_068343450.1\|2832033_2832528_-\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|184695
NZ_CP014771.1\|WP_068338395.1\|2857941_2858727_-\|uroporphyrinogen-III-synthase	unknown	unknown	gnl\|CDD\|119440
NZ_CP014771.1\|WP_082808768.1\|2833077_2834175_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237381
NZ_CP014771.1\|WP_068338377.1\|2849997_2851812_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP014771.1\|WP_157550414.1\|2841371_2843207_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|179620
NZ_CP014771.1\|WP_068343455.1\|2860026_2861043_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_CP014771.1\|WP_068338368.1\|2837756_2840933_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP014771.1\|WP_068338383.1\|2854589_2855402_-\|gliding-motility-protein-GldL	unknown	unknown	gnl\|CDD\|274622
NZ_CP014771.1\|WP_157550413.1\|2834208_2834715_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068343452.1\|2847166_2849416_+\|transglycosylase	unknown	unknown	gnl\|CDD\|227342

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068338379.1\|2851919_2852918_-\|gliding-motility-protein-GldN	gnl\|CDD\|274628	TIGR03523, hypothetical_protein_P700755_05002, gliding motility associated protien GldN. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldN is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldN abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein also include those which are not believed to express the gliding phenotype, such as Prevotella intermedia and Porphyromonas gingivales.	3.34356e-24
NZ_CP014771.1\|WP_068338393.1\|2856737_2857736_-\|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl\|CDD\|274625	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that have type IX secretion systems (T9SS) and exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.	2.60758e-54
NZ_CP014771.1\|WP_082808770.1\|2858797_2860009_-\|DUF4271-domain-containing-protein	gnl\|CDD\|379465	pfam14093, DUF4271, Domain of unknown function (DUF4271). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 221 and 326 amino acids in length.	6.53536e-10
NZ_CP014771.1\|WP_068338373.1\|2843366_2843603_-\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.42633e-14
NZ_CP014771.1\|WP_082808769.1\|2836015_2837644_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	6.47003e-46
NZ_CP014771.1\|WP_068338359.1\|2832731_2832992_-\|ATP-synthase-F0-subunit-C	gnl\|CDD\|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	4.28349e-14
NZ_CP014771.1\|WP_068338384.1\|2855479_2856496_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|274632	TIGR03529, gliding_motility-associated_lipoprotein_GldK, gliding motility-associated lipoprotein GldK. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldK is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldK abolish the gliding phenotype. GldK is homologous to GldJ. This model represents a GldK homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture than that found in Flavobacterium johnsoniae and related species (represented by (TIGR03525). Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.38005e-174
NZ_CP014771.1\|WP_068338375.1\|2843786_2846876_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.40389e-11
NZ_CP014771.1\|WP_068338381.1\|2852953_2854537_-\|gliding-motility-protein-GldM	gnl\|CDD\|274624	TIGR03517, GldM_gliding, gliding motility-associated protein GldM. This protein family, GldM, is named for the member from Flavobacterium johnsoniae, which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes. However, members are found also in several members of the Bacteriodetes that appear not to be motile. The best conserved region, toward the N-terminus, is centered on a highly hydrobobic probable transmembrane helix. Two paralogs are found in Cytophaga hutchinsonii.	3.25174e-107
NZ_CP014771.1\|WP_068343450.1\|2832033_2832528_-\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|184695	PRK14471, PRK14471, F0F1 ATP synthase subunit B; Provisional.	6.4629e-58
NZ_CP014771.1\|WP_068338395.1\|2857941_2858727_-\|uroporphyrinogen-III-synthase	gnl\|CDD\|119440	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.	1.00585e-47
NZ_CP014771.1\|WP_082808768.1\|2833077_2834175_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237381	PRK13419, PRK13419, F0F1 ATP synthase subunit A; Provisional.	1.61026e-78
NZ_CP014771.1\|WP_068338377.1\|2849997_2851812_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP014771.1\|WP_157550414.1\|2841371_2843207_-\|serine-hydrolase	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	7.63599e-46
NZ_CP014771.1\|WP_068343455.1\|2860026_2861043_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	2.11413e-73
NZ_CP014771.1\|WP_068338368.1\|2837756_2840933_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	1.37767e-174
NZ_CP014771.1\|WP_068338383.1\|2854589_2855402_-\|gliding-motility-protein-GldL	gnl\|CDD\|274622	TIGR03513, GldL_gliding, gliding motility-associated protein GldL. This protein family, GldL, is named for the member from Flavobacterium johnsoniae, which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes. However, members are found also in several members of the Bacteriodetes that appear not to be motile [Cellular processes, Chemotaxis and motility].	4.42157e-56
NZ_CP014771.1\|WP_068343452.1\|2847166_2849416_+\|transglycosylase	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	9.37875e-141

>NZ_CP014771.1|WP_068338375.1|2843786_2846876_+|hypothetical-protein
MKIAFLLRNLRFWLLAGLGLGVVACASDKSLVSHAINNVAARDNGFFLAREKLRATEATLYKGRNDDYNRVLPLYPVLDSGTVRATRADLNDIIKKASLPIQHRAGSDWTDDAYLLVGWSRFYKMEFDDAILTFKYVNSTSRDPFAKQEALIGLMRTFLITKQLDNAKAVSDLLDKEVGLPKDARELFMARTDYYLQTEEPVKAIEQLEKAVPLTPVKNERSRSRFILAQLYQQQGQNKEATAQLNAILKHNPPYELDFQTKLLLGQVTDLDQQSKERLDKYFAALLKDPKNKEYRDKIYYEMARVAYRQQKYADALGLLRTAAKVPTVSKSQKGYTYLLAGRIYYENLHKYQLAAAYYDSTTQAMPKENPLYAATLERAGILKEFAKQYTIIETQDSLQTLARLPAAELDKRLSTYAAAELEAKRLAAAKAAAAQQALARKQQSDASRISSSPSALGVNQRDISNPNAFDATTAVASGAQWYFDNPASLSTARTEFIRVWGDRKLQDNWRTTLTPSSSPNAPQNGGAPVSVTGNDQTQVNGGAGGARPVAPPVAADPLAEQNALAAKYRRDIPDSPPKLQASNQQIEAAMYELGGIYKEQLKEKLRGYETYAGEVARYPRGEHAPDADYLLYLYYKDLPDPAKAAQYAAALQREFPTSTYAKLIADPLYREHERALHNAVAARLDSAFVLYKDQYFTKAKAAVARIEQAYPKSDLTDRVAYLKLLLAIRTQPPGAVRASVTQFVKDYPDSPLVPQAQGLAGALQKAEAGQLAGALASTDKPVISQFRPGEIDNRLRILYEDNAPPPPTPAPTPPAAAQPAPAAAPTLKAAPKAARTRKNAPAKALDLAVPAAATPVPTGTASAAAGTTPAGTAPTTTPPATTPGQPAAALPAPAEPATPPAAPAVAYATQLSAAHAVVLVYPKGTAPTADLAAQLTTYNGKFFRANNLTVQPAQALGTDQEVVVVRALQGAKVAQSYATKLRGPQSPLARLRGQGYQTLIISLANLALLQATGGDLAGYQQFYQKVYP
>NZ_CP014771.1|WP_068338373.1|2843366_2843603_-|AtpZ/AtpI-family-protein
MPTPPLPPEADDEARNNSALARYSGIAAQMFAIIGFSTWAGVWLDGHFHTTTPWYTISLTLFGIFGALYQVIRSVTSK
>NZ_CP014771.1|WP_157550414.1|2841371_2843207_-|serine-hydrolase
MLRYLFLRPVVVLCVWWGALGWLNPLASQGQPRQTPSLPPLTTANVVLLRNEGDLLPLQRLDTLRLATIKMPPATGREVIDFSAHLQQAVADYAAADFVNGLPAPPAARLRSRNLLLLVLPAAGSQDRLALQQALKLRKKLVVLLFDSTALARLPELPQATAVVLARQRTAQVCGQAIQVIFGGVGAAGRLALPVPVGLTAGLPTRGGLRLAYGTPAAAGLRPTLPFLVDSLMRKALAGKAFPGGEVIVVRHGVVALRRSYGVLQAADPAAPVLTTTLYDFASLTKVTAALPALMLLQDRGLFGPDYTLGALFDFLKGSNKQDLRLRDVLTHQARLRAFIPFWQQYVNADGRPNPRFLRPDSSAAFPLPVAAGLWARRDMPALLYQGIAASPLNAKPGYVYSDLSFMLYPSYVRKATGRPFDQFITEEIYQPLGATTLGFNPEHRFPGRRIAPTEYDSVFRHQLVRGTVHDESAALLGGVSGHAGLFGSANDLAKLVQLYLWQGRYGGQQLIKAATMDEYTRCQFCPANRRALGFDKPNPKNPALNAARGASPRSYGHTGFTGTYFWVEPDLDLFVILLTNRVNPTRHNNRLGELGVRSALLQLAIESAQP
>NZ_CP014771.1|WP_068338368.1|2837756_2840933_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKKRYFLPFALLPGVLLAPPGHAQTTPATAAATGTVSGVVHQAADNTALPGVNVIVKGTSNGTATNADGRFTLSGVPAGATLVFSFVGYEPMERRADGSNLTVTLTASKRDLDEVVVLAYGIKQDRRDIVTSVQEVSSKDIIDSRQTNIVNALQGKVAGVNITSSGGGAGEGASIVIRGGTSLDGDNQPLFVIDGMIMDNSSFQESTAPGGGSAFNGLLGRSVGAANRAGDLNPEDIASMTVLKGPAAAALYGLRAANGAVVITTKKGGAGRTQLNFRTQYSVDQVNRLPQVQDQYGQGSGGVFDPSTRSSFGARFQPGQPVYDNLGNFFQKGQMYQNFVNMSGGSDKASFFASASNLQQTGVTPESKYDKTTVRLSGSAQISPKLSVTGSAQYLTSGAVRPLQGPGLYGSSGGFLLSLLNWPRNDDARNYLNPDGSRRRLLPLGAGTDSDADNPYWTVNKNPQSDRTNRFVGNVQVSFSPVKWLTLSHNIGTDLSTTRSQSVRAVGTSQVGNQFGGLAQTVDQARLLTATTLATFNHSFFNEKLRGSFLLGNTIEENKDEAVDYIGLIFQNPDFIGLNNTVNRNALERDQTRHLIGNFARLSTTIFDQLIVELQARYDQSSTLPRPDQDKIFGKGFLYGSAAAGYEFTKILGLDQNPVLNYGKIRASVAEVGKDTGPYRVLAPLTTNTYIGGGFRNDFFGSNPNLKPERTRTYEAGINLQFFKNRLSFDFNYYRSRTRDQLIAPRVSQATGFTFQYINGGVVTNEGQEISLNGTLVRTAAGFTWDIGANFYHNTNNVESLPSPLTVVYQSDTFITNVQEGGAFPGHPISGIAATDFARVTDPSSPYYGQAIVNATTGYPTTSATFVYAGNRAPRFTTQFTNTFTYKGLSLTSLLDFRVGGVVVNGNDWYETGVGTSPRTLDRYKTVVFDGVVAQKDASGNTTYVPNARPAELNQTYYTNILSNVGKAFIEDGSWVRLRYVALSYALPQRWLGGASSFLKGIELNVTGRNLWLLTKYSGADPETATAGAGVRGGGSGGIDYGNIPATRGVDMGLRVNF
>NZ_CP014771.1|WP_082808769.1|2836015_2837644_-|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MTAYFPATPGGRLFLPKVSYPMKKYLLFLSLLGASAALTSCEKYLDVNSNPNNPVVSTPNFLLPNVISNGIQTQMFTALRTPYITQYVVSRTANSGGNDQYYFTNAQSTNTFNYSYFYSGGNIPQMIQVAQAEGSVYYVGAGKIMQALILAHVTDMLGDVPYTEAYQGGANYTPKYDSQQSIYDVINQLCDEGVVELSKPASANFRAFYATSPSESGDILYKGDPAKWVRLAYSLKARQAQHLTKKASYSPAAVLALCDKGFTSTADDAQINFQVAVAPLVNTTNIFGTTRSNFGTAVFSSNVVKYLNGTTFPGVTDPRFGILVPTTSTGVDPGAGTAAGTNITPGSTYTDFYGSWYARDLGYFEAITYHELKFIQAEAAFRAGNKTLALASLKEGIRAHMAKVGQGGSNAVPAVTFPVISATQISAYLASAAVPQTEADLTTLRPIMEQKYIAMFLNPDSWSDLRRLDFDPAIYVNFVYPTRTVNPVVAGQTDPKLRYPRRLLPGATELLYNPNAVAKLFSDAGATTNDDYVTKPLWFDMP
>NZ_CP014771.1|WP_068338364.1|2834740_2835988_-|hypothetical-protein
MKILNKNLLPLLAGLALLAGCKKDIPTFYQPVAAPGFFNLGILGPATLNPTFNAKYAPGETIPVTALFNAPDNLTTITVFQATKTDSAQAGSYPAGGTFNPTLQSTAQTVPYVVPAAYPIGTMVRVDVTLTFAGGTRLRRFTYQVANPPTLIFGSPAATYRNGLSATAQSEGDLIGYAVTLNAGGVSTATGLAPNLFKNVDSLVYYARVGTAGPLLRQGVIKTPTAGVENKRTIDLRVPPGAAGGGATFIFMAFAQSTSTTLTTPPLSVGAPTPLKTTRQGRVSFGGGLSTDSLAFNLVTSLNEPAANAVTAKDLQVNGLSSTGTLTLNTSNPTRYYKLTTAQLAATPYATASANAIGTLLYQNTASADLGTPAVGDVYAVRLRGTPEVMLLRILALKPSTTGGVGRVRFEYRSL
>NZ_CP014771.1|WP_157550413.1|2834208_2834715_-|hypothetical-protein
MWPRWRWLAGLLRGGAPIRADLCLSARDFPRMNSRFLTHFLAFALACFAVLFGLRAGFGRVVINPLAPAILGVLLGLTLLAYWFTAWYTRRSPDNFLAAYFGGVGLRLAVGVGMVLLYFFRSGLTGNHDLLTFLGAFFLAYFLCAGFEIWAIFSNLRPFSAKSLPESE
>NZ_CP014771.1|WP_082808768.1|2833077_2834175_-|F0F1-ATP-synthase-subunit-A
MKRLLTLFLCLCTFGGFAAEPGETGKKEAAFNPSEVILHHVADSHEWHWFSTDNGNFVSYFPIIAYQPSKGLSVFSSEKVAEGKTNGNFKLEDEKLVSLDGSKVYDFSITKNVAALAMSSLMLLIVFVSVARTYKHRVGQAPSGLQGFLEPFVIFIRDEIAKKSIGPKYERYMPYLLTVFFFIWFNNLLGLTPGAANLTGNVAVTAMLAVLTLIVTLFSSNKNYWTHIFWTPGVPLPLRIIMIPVELVGVIVKPFSLAVRLFANITAGHIIILSFISLIFIFRSAVTGLFSVPFGLFISVLELLVAILQAYIFTLLTAMYIGGALEEHHDEAHGPGHEHDDYGFAEERQGGSNFANLTKPDIAAH
>NZ_CP014771.1|WP_068338359.1|2832731_2832992_-|ATP-synthase-F0-subunit-C
MLLSLLLQVVNSVGLAVMGAGIGAGLAIIGAGLGIGRIGGSAMEAIGRQPEASGKIQTAMLIVAALIEGAALFAVVVCLLIALNLK
>NZ_CP014771.1|WP_068343450.1|2832033_2832528_-|F0F1-ATP-synthase-subunit-B
MSLITPEFGLLFWQTLIFLILLLLLARFAWKPILSSLKEREDSIDEALKMAQNAKLEMQSLKAGNEKLLADARHERDQMLKEGQTIANQLIEQAKTTAVEEANRIAQQAREAIQQEKNQALAEVKNTAAQLSVDIAERVLRRELAEPAAQQKLVDDYLKDVKLN
>NZ_CP014771.1|WP_068343452.1|2847166_2849416_+|transglycosylase
MWVLFGGGLVVALLYLGAVSVNFMNLFGRMPNLHALENPKSELASEIYSADGVLLGKYFRENRTPVEYKDLPQNVIDALIATEDVRFEEHSGIDFKSIMRVVGSLGRAGGGSTLTQQVAKVLFKTRADGLNNGTLNGTGKLGLLITKTKEWLLAIKLERNYTKREILRMYLNTVDYGSNAFGINTAAKTFFNKSPKQLTTPEAATLVGIVNAPSRFSPAMHPARSKRRRNWVLQQMVRANYLPADEMRRDTAKAIVLHYSVESSVQGLAPYFRTEVAKYLQTWARDTDHDLYADGLKIYTTLDSRMQAYAEKAVAEHLTLQQKWFSAQWKGQLPWRDENGRVIPGFLEASMRRTQRYKSLVERFEGNKDSVRYYLNHKYPMTVFSWQGEQQVMMSPMDSLAYYKRYLRAGFLAVNPLNGYVKAWVGGPNYKFFKFDHVRQGKRQPGSTFKPIVYTAAIDQGYSPCFPRPDVATTFPGVAGRPPYTPHNFEGAFSGRTFTLRQALARSMNSITAWLVFKLGPETVVAYAKRLGITSPIDAVPAVGFGASDCSIYELCGAYGTFVNKGVWTSPIMVTRIEDKNGNELRRFVAQTREALSEETAYVMTNMLQASTTEPGGTSTILHTGFKFNTTIGAKTGTTSNYSDAWFMGITPNLVCGMWVGGEDRSIHFRTGAYGQGARLALPLYGIFMKKVYADKSLDVDTGPFPLPAAPLTIELDCSKYYGAGQQDTIPNNQKMVQPKLDELDDKDI
>NZ_CP014771.1|WP_068338377.1|2849997_2851812_+|excinuclease-ABC-subunit-UvrC
MAASALLQEQINHLPHRPGVYKYYDDEGIIYVGKAVDLRKRVSSYFTKQDHNKKTQQLVKNIKRIEFTIVDSESDAFLLENNLIKQHQPKYNILLKDGKTYPYLLLTKERFPRLIPTRNKQPGDGQYFGPYANQGGLNVLLELIRALYPLRTCTYNLSPENVAAGKFKVCLEYHIGNCKGPCVGHEDEAVYGQYIQQIRQILNGDLRLPKQYFRDKMTAAAQEMQYELAHQFKQKLDKLDDFQAKSTIVSATLTNIDVFSIASNEKAAFVNYLKVMNGSIILTQNLELTKKLDESDGEVLAPLIMQLRQEYASEAREILTNVPIEPLPLPGVAVAQPQIGDKRKLLELSIKNVLYARKEKESMNEKSKDVNEVRIMEQIKKDLRLTELPKHIECFDNSNFQGDNPVAAMVCFRNARPSKKDYRHYHIKTVIGPNDFDSMYEVVHRRYRRLTDEGASLPQLIIVDGGKGQLSMAVKAIKDLNLWGQLAVIGIAKRLEEIYVPNDPLPLYIDKKSESLRLFQRMRDEVHRFGITFHRSLRDAGTLKTELTDVKGLGPVTADKLLSKFKSVKKIKELTEAELVAEVGKAKAKILLTYFTQQEITTPH
>NZ_CP014771.1|WP_068338379.1|2851919_2852918_-|gliding-motility-protein-GldN
MTRYFKALPITAVALLAALAGRAQEQATSTASTGAIRQIPVSDQMFRKTIWRAIDLREKQNRPMFSDGHEISRVIIDAVRRGELQPYKNDSLTSTFSPKEMSSNMSYAVEAPVSPDADGGDWGSTPAPKGTKKAAPANDGWGAPVASTPSATKRVAKKDASGRIMKDRRGKTIYTTVSTVAAAPPPPPPATSAEYRPKDIYQMELTEEMIFDKKRSRMYHQIKTISLKLPSTLGTNTSGLEKNIATFKYSDLVKVFRNNPQQAIWFNAQNDAQHKNLADAFELWLFNSYIVKVSNPSGDDLATQYGSEREGLLAAQQTAADLVEYEYSLWSF
>NZ_CP014771.1|WP_068338381.1|2852953_2854537_-|gliding-motility-protein-GldM
MAAANETPRQKMIGMMYLVLTALLALQVNSAILLKFKFIDDSLTDVNGKTETAADNTVKGIEAAVAKNRNQASDVAVLKKSQEIRDETKKVIDYLNGVRDNLYKATENTKGGNDYKNMSAEDKVAITMLGGKQNGLAYPLQKQLNGYSDYIKQFVPDARPLALDAKDDTRIAPNSEQKHKNFAELNFENTPVVAALAVLSQKETEVLKYQADALQKQAEKVGAKTIVFDKLGAFASAESNTVAAGTKYKADLFLTASASNLKPSMTYNGSSLAVGPDGHGKVEFTARPGNFDQAGNAKSSWTGTIRLNQAGRDTTFKVLVPYTITKPVMQIQSASVQALYFECGNKLSVQVPALGAQYQPSFSASGAQVITGQKGDVTLVPNAREVTLNVSSGGNAIGSQVFKVRPIPNPTIKCYVGGSEANEKQGTPGTSIRTVTLKAIPDPGFFTFLPEDARYRVSRFQAVLARGKRPVIGPKTVNGPQGDFSDMVNAYKEGDRLYIEVQSVQRMNFQNQVKDVNMTRAFNIPLQ
>NZ_CP014771.1|WP_068338383.1|2854589_2855402_-|gliding-motility-protein-GldL
MARKKNFLYDDVMPKVYGIGAAVVIIGALFKILHWKGADTMLMVGLGTEAVIFFLSAFQPHQSDHDWALVYPELSEGYDPSTNDNRFRDSAPQPNGLTGKLDDMLKNANVTPEALTNLGQGLNRLSATTAQLGQLGDATNATDEYTQKVRTAANSLDGINKAYSNTVEAVTSLSGATNDAKEYHMQVQTVTKNLGALNAVYEMELQDANTHLKSMNQFSGMMAKAMENMVQTGKDTESLQGQVSDLTGNLTSLNRVYGNMLNAMRAGAAS
>NZ_CP014771.1|WP_068338384.1|2855479_2856496_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MKKFLVLPLLALSGVLLGGCFTKNFQGDLVGTDDRPIFNPQEVPFGMVPCPGGTFHMGQTDQDIAASMVNMNKQVTIAGFYMDETEITNNEYRQFVNAIMQDSVEALGEDYIKTELYPDTTVWVRDFTYHMGDPLLEYYYSHPAFDDYPVVGVDWFAARYFCTWRTKLKNNTNEELGEAPYPNFRLPSEAEWEYAARGGREGATFPWGGPYVRNTRGCMLANFKPGRGDYASDGYAYTSEVGSYFPNDFGLYDMAGNVSEWCDDAYMEASVPIVWDLNPTNSDDNEPRKVVRGGSWKDIQYYLETGTRNFEYQDSARSYIGFRCSMIQIGMGTNRRLN
>NZ_CP014771.1|WP_068338393.1|2856737_2857736_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MKGIVLAALLLSVAAAPALAQQQPQFTHYGLNSMYLNPAYAGITGQTEVNVIGRYQYLNLGNSLGDDNGSPRTGMVSASIPILPLSGGVGLAVYYDQAGVTKMTNAALSYSQHIKLGSGKLGIGIQGIYTYIGKGTYRAIDPNDINIPANSSDHKFDAGAGIWYEAPKFYAGLSLNNLLRSEYTFKSNGTAGVGSQYLGENHAYLTTGYNIEASSSVTVTPMLLVKAVLPGNYDTKSKYDNQHNYSFEVGARATYNDQFSAGLNYRYDESVSGLLGYAFGADNRYRIGYAFDFIAFNQAARAFSSHEILFSLRLPKAVLLTRPAIRTPRYSF
>NZ_CP014771.1|WP_068338395.1|2857941_2858727_-|uroporphyrinogen-III-synthase
MAESAVQPGLDRHAQPIRSILVTQPTPTNDVSPYFSLAEKYGIRIDFREFIDVQGVPYKEFRKDKVAILEHTAVIFTSRNAVDHFFRICQEAKLEMPAEMKYFCISEQTANYLQKYIVLRKRKLFVGVRTAADLFDVIKKHKGEKFLYPCSDIRKDDLPEFMRANNLKFTEAVIYRTVASDLSDLAEVKYDCLAFFSPSGISSLFVNFPDFLQDGTRIAAFGPTTAKAVRDANLILDIEAPMPNAPSMTGAIEAYIRQHAA
>NZ_CP014771.1|WP_082808770.1|2858797_2860009_-|DUF4271-domain-containing-protein
MTAGRLSFLRGCLGLLLSAWLVSSALVPRAFAAEYYPLPPAAAPGLDPDNWLLHDVAGNRLILYLPGYHAPAHTYYQWVRLLPQQPFRLSFAAARGLSIFLDNQLIFTAKASGRYVIGLARTVPAAQAGRPHLLAVWQREGYPALSSFSAEAQAPVRAASLAAPAATPALVMLRVPPLQGESALLVLLLLVGLLYGVVRATNPVGLARILQVNELFGNSTEPQAFLARPAFTWLNLVLVLLFALSLSLLLTALHTDLSSLPLLQQVLKVRESAIVARVSLYTALILTFVLSKYLLVELLSYIFDLRALVNVHYREFLRTTLLLGLLLPLVLLLYLGLNARWPQVVELANGCVLLLLTATVLRVARTLHQRTSLLNLHLFAYLCATEVLPLAVLLKLIVFTYAI
>NZ_CP014771.1|WP_068343455.1|2860026_2861043_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MFAVPSIVQIAHLKNLLDTPNGRTVHQSLTPRLGGVAIFAGFMSALTIFAPLSNGVKELLAGCIILFFVGLKDDLVTISVAKKFVGQLLATGVVMIMADVRVTSFQGILGIYTLPVGVSYGFTFVMIVGITNAINLIDGLDGLAGTIVLILAGTFGYYFYRYGGPEFSNYAFVSVCLIGGILGFLRYNFHRASIFMGDTGSLVCGFIVSILAIQFIELGSRTGQPFGSESPAVTLGVLFVPLFDTLRVFILRMAAGRSPFSPDKNHVHHRIMAMGFSQISAVLLLGLLNIVVILFVINFFFLGNLVLIGILVIFSVLLSVFLGVYQSRAARRQVASSS

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Crispr_ID: NZ_CP014771_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_9

4074672-4074772

Orphan

Consensus_repeat	Method
TTGTAGCGCATATCGGGCGTGCCGTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_9

>merge|NZ_CP014771|9|4074672-4074772|CRISPRCasFinder
TTGTAGCGCATATCGGGCGTGCCGTCGGCTTTCATCGGGCCGGCAGTATGCATGGTAGTCGTTCTGTTGGCCTTGTAGCGCATGTCGGGCGTGCCGTCGGC

>NZ_CP014771|9|8|4074672-4074772|CRISPRCasFinder
TTGTAGCGCATATCGGGCGTGCCGTCGGC	TTTCATCGGGCCGGCAGTATGCATGGTAGTCGTTCTGTTGGCC
TTGTAGCGCATGTCGGGCGTGCCGTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068341170.1\|4069565_4070549_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP014771.1\|WP_068341207.1\|4087689_4089735_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|224250
NZ_CP014771.1\|WP_068341159.1\|4065429_4066290_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP014771.1\|WP_068341198.1\|4084328_4084511_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068341186.1\|4075951_4079638_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP014771.1\|WP_068343725.1\|4066477_4067170_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NZ_CP014771.1\|WP_068341164.1\|4067800_4068517_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NZ_CP014771.1\|WP_068341189.1\|4080004_4081072_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
NZ_CP014771.1\|WP_157550562.1\|4075240_4075423_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068341195.1\|4081946_4083233_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238520
NZ_CP014771.1\|WP_082809021.1\|4068798_4069464_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP014771.1\|WP_082809020.1\|4067364_4067595_+\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|274783
NZ_CP014771.1\|WP_082808870.1\|4072292_4072643_+\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377473
NZ_CP014771.1\|WP_068341183.1\|4075503_4075833_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP014771.1\|WP_068341192.1\|4081108_4081807_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239489
NZ_CP014771.1\|WP_082808871.1\|4083334_4084126_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP014771.1\|WP_068341174.1\|4071117_4071636_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP014771.1\|WP_068341177.1\|4072729_4074055_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP014771.1\|WP_068341173.1\|4070545_4070911_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068341204.1\|4085029_4087576_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068341170.1\|4069565_4070549_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	3.33762e-26
NZ_CP014771.1\|WP_068341207.1\|4087689_4089735_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP014771.1\|WP_068341159.1\|4065429_4066290_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	2.11907e-156
NZ_CP014771.1\|WP_068341186.1\|4075951_4079638_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP014771.1\|WP_068343725.1\|4066477_4067170_+\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	2.71988e-47
NZ_CP014771.1\|WP_068341164.1\|4067800_4068517_+\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	6.87716e-45
NZ_CP014771.1\|WP_068341189.1\|4080004_4081072_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	1.35058e-12
NZ_CP014771.1\|WP_068341183.1\|4075503_4075833_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	3.02732e-49
NZ_CP014771.1\|WP_068341204.1\|4085029_4087576_-\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP014771.1\|WP_082809021.1\|4068798_4069464_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	1.91726e-47
NZ_CP014771.1\|WP_082809020.1\|4067364_4067595_+\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|274783	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein. A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking].	1.70331e-05
NZ_CP014771.1\|WP_082808870.1\|4072292_4072643_+\|TM2-domain-containing-protein	gnl\|CDD\|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	1.0081e-11
NZ_CP014771.1\|WP_068341195.1\|4081946_4083233_+\|aminopeptidase-P-family-protein	gnl\|CDD\|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	3.16449e-87
NZ_CP014771.1\|WP_068341192.1\|4081108_4081807_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239489	cd03395, PAP2_like_4, PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.79258e-16
NZ_CP014771.1\|WP_082808871.1\|4083334_4084126_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.64317e-18
NZ_CP014771.1\|WP_068341174.1\|4071117_4071636_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	2.89528e-74
NZ_CP014771.1\|WP_068341177.1\|4072729_4074055_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.49875e-129

>NZ_CP014771.1|WP_068341177.1|4072729_4074055_-|HlyC/CorC-family-transporter
MGLKILLTLFLVLINAFFVAAEFSLIRVRFSQLEIKAKEGSRLAEQALSVVRRLYDYLSATQLGVTIASLLLGAVGEELFTELILDFLPHLGLAINPVTAHSISVAVGLIILTFLHVLFGELFPKALAIQRPEAVSLALVLPLRAFYLATIPLTWFLSKASNLLLGAFGISNVHGNEAHTSDELRLLIDQSKESGEIQDSEHELIENVFQFNDRMVKQIMVPRTKLAALEVNMSEEQLLETVFSEGYSRLPVYEGNIDNIVGVLYVKDLLPLIRQQQPVELARIMRPAYFVPETKKINRLLRQFQRKHLVMAIVSDEFGGVSGIVTIEDIMEELVGEIQDEYDNEVPVVEKISETEYRVNTSTAISDANEYLPYPLPEGDDYETVGGLLNVLYGNIPEVGDVAVLEPYEFRVLSRARRVVELVQLRVLTPATANADLILGG
>NZ_CP014771.1|WP_082808870.1|4072292_4072643_+|TM2-domain-containing-protein
MAPLAHASAAASIVTNQPVATGKFDRKAFKHELKRQLAAAPKDISAEGKSQLVAVILCFFLGGLGIHDFYMGYVGKGILQIILSLLIVGFILVIIDFIRLLTGSLKPKDGDWGTKL
>NZ_CP014771.1|WP_068341174.1|4071117_4071636_+|gamma-carbonic-anhydrase-family-protein
MPALILPVHGITPIIGPDCFIADNATIVGDVVLGRACTVWFTAVIRGDVNRIRIGDATNVQDGAVLHCTFEKAALTIGSRVSIGHRALVHGCTVHDDVLIGMGAIVMDHAVVGAGCLIAAGAVVLENTICEPGYLYAGVPAKKIKPVSAAQAEGLRRTAANYQRYASWFETE
>NZ_CP014771.1|WP_068341173.1|4070545_4070911_-|hypothetical-protein
MLVLVTTLSGLMLWFTKLHTQLATDGVRVRFAPMQSEWRFTPWAQVRQAYLRTYAPLREYGGWGMRTFEGESGAYTAWGHQGMQLILVSGEPLLIGTQQPEAIQRILSKLRIRGSQREVED
>NZ_CP014771.1|WP_068341170.1|4069565_4070549_+|radical-SAM-protein
MRLVKHPVLCNYYVTYRCNAKCSFCDIWEKPSPYITLTDVEANLRDLKRLGVNVIDFTGGEPLLHRQLPEFLALARQLGFITTVTTNGLLYPKNAERLRGLVDMLHFSLDSIDRATHDRSRGVACYDFVLESIRVAKALGERPDILFTVFRHNLADLEAVYREITQPNGLVLILNPAFEYGEVETGEQLTEAELDFLSAFGKRRGVYLNEGFIALRRDGGNHVAAPVCRAASTTLVISPSNELVLPCYHLGEQKFPINGRLFDLYQAPETQRLAALEGRLPPCEGCTINCYMQPSFAVETSKYFWQALPSTLKYNWEKGTWKRLLSV
>NZ_CP014771.1|WP_082809021.1|4068798_4069464_+|endonuclease-III
MRELISTLLSHRTTHADEELAYDRMLEAFGDWEGMLHAPLDGLIHAIRTTRWPATQAPRIQDILGRIKVETGGSFSLDFLADWPTERGMQWLTDMPGIGLKTASLVLLFNFRKPVLPVDAHVHRVMQRLGVLGPKVSVEKAHSVLLDLLKPELDPEGLFNFHKHNYWHGQQICFFQKPNCARCPLKSFCDYYDEHFGAPTPAALAETPAHWDAAVWGKLPH
>NZ_CP014771.1|WP_068341164.1|4067800_4068517_+|OmpA-family-protein
MKTLKLSFSYLLAVLLLFGHFAQAQSTTVTTDKPAGMSKTLKGGILGGLGGAAGGAILGRVIGGKSGTAKGAILGAAVGGAGGALIGRRMDKQAAELRRDLDGATVERVGEGIKITFASGILFGSNSSSLTSAAAGNIDELATTLQKYADTNITIDGHTDSSGSNAINQPLSQRRAQAVANELTAKGVDNSRIKATGYGSSQPVGDNATAAGKAANRRVEVAIFANEKMQKAAKRGQL
>NZ_CP014771.1|WP_082809020.1|4067364_4067595_+|glycine-zipper-2TM-domain-containing-protein
MLAGTVAQAQDKPKGWSRKAKGAAIGGGSGAVVGGLLGGGKGAVIGAAAGVVSGGLIGRNQDKKKDPACYNRYHKK
>NZ_CP014771.1|WP_068343725.1|4066477_4067170_+|OmpA-family-protein
MLLSSCASSRPANGNLSDNNGTGVRKDGMNKTTKGGLLGAGGGAAVGALVGGLFGGGKGTAIGAILGAAAGGTTGALIGRKMDKQAAELQRNMAGAKVERVGEGIKITFDSGILFDTNSAALRAASTADIDKLATTLKEYPDTNILVEGHTDNTGTDAINQPLSENRAQSVSSALTTDGVAGSRITTKGYGSSQPVADNSTEAGKQANRRVEIAIFANDKMKKAAENGTL
>NZ_CP014771.1|WP_068341159.1|4065429_4066290_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MAWFKRQEKGIITPTEQKKETPDGLWYKCPECKTVATMAEHKRLHYVCANCGHHDRIEASAYFELLFDGGEFTELDANLTSGDPLHFVDTKAYPQRVQATEKNTGLKDAVRTAHGLSAGQPLVIAAMDFRFIGGSMGSVVGEKIARAIDYARQNRVPFLMISRSGGARMMEAGYSLMQMAKTSARLALLAEAKVPYISLLTDPTTGGVTASFAMLGDFNIAEPGALIGFAGPRVIKETIGKDLPKGFQSAEFVLEHGFLDFIVDRRELKQRLADLLGMVGKEGGRG
>NZ_CP014771.1|WP_157550562.1|4075240_4075423_+|hypothetical-protein
MKKHLLLSLFVMSLCGTAELQAAPSRLPATVTRANPDRLQRTMRRLHRQAQARARKNRHR
>NZ_CP014771.1|WP_068341183.1|4075503_4075833_-|thioredoxin
MAHKAIEITDANFEEIINSDKPVLVDFWAEWCGPCRMVGPVVEELAGEYEGKVIVGKVDVDANPQTSMKFGIRSIPTLLVFKNGQIVDKQVGAVPKHVLAQKLEAQVTA
>NZ_CP014771.1|WP_068341186.1|4075951_4079638_-|DNA-polymerase-III-subunit-alpha
MPTFSHLHSHTQYSLLDGQASISALMKKAQADGMPAVALTDHGNMFGAFNFVAEANKYNVKPIVGCEFYLVADRHKKSFLREKGEKDNRYHQLLLAKDQAGYHNLSKLCSMSFIEGVYSKFPRIDKELLMQYHEGLIATSCCIGAEVPQAILFESEERAEELLKWWLNVFGEDYYIEIQRHGLMNFDGTGKSQEDVNQVLLKLAKKYNVKVICTNDSHYVDQTDYAAHDLLLCVNTAEERSIPVGDFETNYYTVLTADQRVHYGPLDDLKAAHGYDENARRMLGRIDEELQKPPKQRKRRFGFANDQFFFKTQAQMNALFADVPASVDNTNEIVDKITPPKLARDILLPNFPLPPQFANADEFLRDLTFKGAFEGPKPRYSERTTEVEERLNYELRIIQTMGFAGYFLITQDFINKGRSMGVAVGPGRGSAAGSAVAYCVGITNIDPIKYSLLFERFLNPERVSMPDIDIDFDDVNRQKVIDYVVQKYGKNQVAQIITFGTMAAKSSIKDVARALELPLPAANEIAKLVPEKPGTTLAGAFRDVPELAAIRADQSDLKGQILALAERLEGSVRNTGIHAAGIIIAPDDITKYIPVSTSKDSDLLITQFDGKVIESAGMLKMDFLGLKTLTIIVDAVNLIERNHGVKIDIDDIPLDDEKTYQLYQRGDTIGTFQFESEGMRMYLKDLKPTNIEDLIAMNALYRPGPMQFIPDFINRKHGREPVEYPHELLKPILDYSQGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKDMKKMALEREKFIEGAGKLHKIPSKKASEVFDVMEKFAEYGFNRSHSAAYSVVAYQTGYLKANYPAEYMAAVLTNNMGDIKKVTFFIEEARKQGVAVLGPDVNESEQKFNVPRANQIRFGLAAIKGAGEAAVLELVEERQKSGPFSDVFDFAKRINLRSVNKKTWESLAQAGAFDSFEKYNRRQFMDAPAGDQNLIEKAMKLGQQHQAAKESAQHSLFGASAFGAVAAPLPKVPDLDEWSTTEKLRREKEVVGFYLSGHPLDIYRMEIDAYCTCPLDKLEDQKGKDVNIAGLISGVLFRTTKSGQPMVSFNVEDYDSSINLALFRDDYSKFGPLINPKNYHNEQVPPMFIRGKMELRYGTQDQWELKIKTMEQLANVADKLSKGVRVKLDLRTVTGPMIDRLQEAIEHAKGSKRLEIQFVEPHERLAVDMFSRRFQIEPKTFIDKMKEFELDVCSLL
>NZ_CP014771.1|WP_068341189.1|4080004_4081072_+|fatty-acid-desaturase
MKVLTPTTDPVYTPPAAPSSLDKWLIRYLQDPRDLPFAHLILKITATMLPLAVLLFVPALRGAWWWATFGLLFFFSNARYKGPFGLMLHCTSHRVLFKKKHGWLNNYIPWVLGPLFGQTPESYFVHHMGMHHPENNLPDDQSSTMFYQRDSLGGFLRYLGDFMFLGVAKLAGYFKVRNKPTLRYRLLRGEILYVGLTVALAFVNLPATLAVFVVPFVLSRVIMMLGNWAQHAFIDAETPENCYRNSVTCINTTYNHKCWNDGYHISHHLKPALHWTDHPHHFRQNLAQYAENEAIVFDGIHFLHIFFYLMAKRYDLLARHFVLLDGTQRTETQVTDLLRSRTQRISRAVLVPQLA
>NZ_CP014771.1|WP_068341192.1|4081108_4081807_-|phosphatase-PAP2-family-protein
MLRQTRTFLIPYAVLLVVLGTVLLSTPRHLAFFFVNGHNAPFFDQFFRPFTNVGDGLFYVLVTLGLLFVRFRWAFVSLVCFAVTSLAAQIGKQLIFTGHPRPFRYFSENPGFPPLHVVEGVVMGTLKSFPSGHSTSAFSVFLLLTLLVKDKRWGYAFVALAALTAYSRVYLAQHFVEDVYAGSVLGTGLTLATLHWLLPYLDSHPKPWHNWRLRRPGSKGNSTDPVSPLMGK
>NZ_CP014771.1|WP_068341195.1|4081946_4083233_+|aminopeptidase-P-family-protein
MRYGPIAPELFIENRRRFRELLPPQSLAIFNANDILPTNADGTLALKQNTDLFYLSGVDQEESILVICPDAALEKHREILFLKETSEHILVWEGYKLTKEQAKAVSGVPTIMWLEQFPAVLAALMNEAEYVYLNSNEHIRAVVEVETRDARFIKDLQRRYPLHQYRRAARLTYQLRTIKSAEEIRLMRRACEITGNAFRRVLGFVKPGVWEYEIEAEILHEFVKSGSRGPAYTSIIGSGESATILHYISNDRQCQDGDVLLMDFGAEYANYAADLSRSIPVNGTFSPRQRQVYEAVLRVFKFAKTQLVVGNEIEAYHKAVGVAMEQELIKLDLLKADDVKNQDPDAPLYKQYFPHGTSHYLGLDVHDVGYKYRKFEAGMVYTNEPGIYIREEKLGIRLENDILLTPTGNEDLMANIPLELADIERLMK
>NZ_CP014771.1|WP_082808871.1|4083334_4084126_-|class-I-SAM-dependent-methyltransferase
MKNAVVLWVSLGTLAGVAACTQLPIESNVGGRTSFRADAITNASRRPDSLGYQSRPARDPNGIGRYYQGRQIAHVMGHEGADWLERDERSQEEGTTTLIKELHLKPTDTVADIGAGTGFFTFRLAPLVPQGRVLAVDIQPEMITELKQRQAKNGLRNVEPVLGTTSNPHLPDGAVDVVLIVDAYHEFDKPREMGLAIRKALRPGTGRLALVEYRAEDPSVPIKEIHKMTVAQAKKEMAAIGLEFVEVRETLPQQHLLLFRRPK
>NZ_CP014771.1|WP_068341198.1|4084328_4084511_+|hypothetical-protein
MQNLTSALSRLAVVLTGALALGSCNRAEYAFLPKSASYLGTTTAAPKARVAPAPIATPPR
>NZ_CP014771.1|WP_068341204.1|4085029_4087576_-|primosomal-protein-N'
MSLTFEFASPTPAPAATPDRVTLFVDVILPLPLPKLYTYRVPFELNDNVVVGGRVIVQFGAKRTLSCIVAAVHETPPKEYQAKYILEFIDDAPVVTQPQLKLFRWISEYYLCTLGEVINAALPAALKLSSESRIQLHPAYLNEGSPYPLDDKEQRIVDNLRTEDGKALTFTEVGDLLGIASFHKVIKSLMQKDIIFLFEQMADKYSPKVLKKVRLAHYYVSTAAVERLFEDLAAKPKQVDVLLKYLQRVPVHHNEHLNHQGIEKAYLTSSPHLSASAVNTLIKNGILEQFDQIVSRFPLDENPVAQMPYQLNEAQVVARDEVMGLFDQQNIVLLHGVTGSGKTEIYIDLIRNALDSGGQVLYLLPEIALTAQIVTRLMRVFGSRLGVYHSKFSDNERVEVWNGVLSGRFQVVVGVRSAVFLPFDNLSLIIVDEEHESSYKQYDPAPRYNAREVALMMGNFQGAKVLLGSATPAVETYYMARQGRYGLVTLSKRFGEAGMPEIELIDTRKLRAEKKMHNHFSSDLLSAMASKIAQNEQVILFQNRRGYAPVTECNDCGYIPKCQSCAVSLSYHKHAHELRCHYCGYHEGMPTQCPACGSRALRTQGFGTEKLEDDLKIMLPQANVQRMDLDTTRAKNAYQQIIGDFEQQKTNVLVGTQMVTKGLDFENVSLVGIVNADAIIHYPDYRAHERAYQMFVQVSGRAGRKGKKGKVLIQTGDPTQVIFDKVIRNDYLEFYEYEITQRREHEYPPFARLIRLTVKHMDQELAQKAAIRLTQELADRLGRGPVLGPEAPYIFRIRNFFLQEIVIKLSREHTVLKAAKVAICAALDVVRDQKEYRQARLVVDVDPM
>NZ_CP014771.1|WP_068341207.1|4087689_4089735_-|thioredoxin-domain-containing-protein
MSSPSPTPAANRLAHETSPYLLQHAHNPVDWYPWGPEALARAQAEQKPILVSIGYAACHWCHVMERESFENEQVARVMNEYFVCIKVDREERPDVDQIYMDAVQAMGIQGGWPLNVLLTPEAKPFYGGTYFPPGNWVKLLENVAQAYAGEHRAELEGSAERFVQVLQASELEKYGAAGELVGTAVNDEEFKLMAYNLAQRFDRELGGTNRAPKFPMPSIWRFLLRAHHISGSQQMLNQVNLTLREMAWGGIYDQVGGGWARYSVDAEWLVPHFEKMLYDNGQLLSLYSEAFQVTQEPLYREVVFQTVNWVRRELTNPEGGFYSSLDADSEGEEGKFYVWTREELQAILGEEEPLAAAYYQCTGLGNWEHGNNILHRRQSDANFATEHMLEPHVLAKLIHGWQKQLLAARAHRVRPGLDDKVLTGWNALMISGLLAAYRAFGEREFLDLALRNAEFLQANLRNGPRLYRTWKNGRATISGFLEDYALVIEAYISLYEATFTENWLREAEALTTYVLDNFFDPAEQQFFYTDASAEPLIARKKELFDNVIPGSNSVMAHNLLRLGRHLENSDYQALAVAMLGQVQALVAKEPQHLANWASLYVALLRPGAEVAITGPETEAFRAQLSRHFLPNEILAGSLTASALPLLEGRTGTDQTTLYVCRDRACQLPVHSVAEALAQLAQ

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Crispr_ID: NZ_CP014771_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014771_10

4687443-4687538

Orphan

Consensus_repeat	Method
GCTTGCCCCCGCCCGTCGTTGAACGAAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014771_10

>merge|NZ_CP014771|10|4687443-4687538|CRISPRCasFinder
GCTTGCCCCCGCCCGTCGTTGAACGAAACACTTGGTGACGCCCGCCAAAGTCAAGCATCTTACGCAGCTTGCCCCCGCCCGTCGTTGAACGAAACA

>NZ_CP014771|10|9|4687443-4687538|CRISPRCasFinder
GCTTGCCCCCGCCCGTCGTTGAACGAAACA	CTTGGTGACGCCCGCCAAAGTCAAGCATCTTACGCA
GCTTGCCCCCGCCCGTCGTTGAACGAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014771.1\|WP_068342116.1\|4695685_4697482_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223097
NZ_CP014771.1\|WP_068342101.1\|4684955_4686566_+\|DUF4173-domain-containing-protein	unknown	unknown	gnl\|CDD\|379362
NZ_CP014771.1\|WP_068342109.1\|4692089_4692416_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068342111.1\|4692853_4694275_-\|arginine-decarboxylase	unknown	unknown	gnl\|CDD\|143503
NZ_CP014771.1\|WP_068342098.1\|4683785_4684484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_082808915.1\|4680529_4681345_-\|prenyltransferase	unknown	unknown	gnl\|CDD\|376441
NZ_CP014771.1\|WP_068342104.1\|4687637_4688042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068342106.1\|4688048_4688510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068342114.1\|4694642_4695617_+\|arginase	unknown	unknown	gnl\|CDD\|212515
NZ_CP014771.1\|WP_068342088.1\|4677666_4679925_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP014771.1\|WP_082808917.1\|4691679_4692141_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|379205
NZ_CP014771.1\|WP_068342100.1\|4684480_4684774_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|316153
NZ_CP014771.1\|WP_071955532.1\|4690979_4691606_-\|DUF4304-domain-containing-protein	unknown	unknown	gnl\|CDD\|379489
NZ_CP014771.1\|WP_068342097.1\|4682701_4683472_-\|DUF4197-domain-containing-protein	unknown	unknown	gnl\|CDD\|379394
NZ_CP014771.1\|WP_157550659.1\|4692550_4692697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014771.1\|WP_068342086.1\|4676193_4677312_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377511
NZ_CP014771.1\|WP_068342091.1\|4680026_4680533_+\|TonB-dependent-receptor-plug-domain-containing-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP014771.1\|WP_068342102.1\|4686648_4687434_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153103
NZ_CP014771.1\|WP_082808916.1\|4688561_4690970_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|227342
NZ_CP014771.1\|WP_068342095.1\|4681677_4682469_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180466

Protein	Function_ID	Function_description	E-value
NZ_CP014771.1\|WP_068342116.1\|4695685_4697482_+\|arginine--tRNA-ligase	gnl\|CDD\|223097	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	7.47376e-140
NZ_CP014771.1\|WP_068342101.1\|4684955_4686566_+\|DUF4173-domain-containing-protein	gnl\|CDD\|379362	pfam13777, DUF4173, Domain of unknown function (DUF4173). This domain of unknown function contains multiple predicted transmembrane domains.	6.8593e-39
NZ_CP014771.1\|WP_068342111.1\|4692853_4694275_-\|arginine-decarboxylase	gnl\|CDD\|143503	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase. This subfamily includes plants and biosynthetic prokaryotic arginine decarboxylases (ADC, EC 4.1.1.19). ADC is involved in the biosynthesis of putrescine, which is the precursor of aliphatic polyamines in many organisms. It catalyzes the decarboxylation of L-arginine to agmatine, which is then hydrolyzed to putrescine by agmatinase. ADC is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Homodimer formation and the presence of both PLP and Mg2+ cofactors may be required for catalytic activity. Prokaryotic ADCs (biodegradative), which are fold type I PLP-dependent enzymes, are not included in this family.	2.09875e-130
NZ_CP014771.1\|WP_068342088.1\|4677666_4679925_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP014771.1\|WP_082808915.1\|4680529_4681345_-\|prenyltransferase	gnl\|CDD\|376441	pfam01040, UbiA, UbiA prenyltransferase family.	4.87676e-13
NZ_CP014771.1\|WP_068342114.1\|4694642_4695617_+\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	3.83244e-116
NZ_CP014771.1\|WP_082808917.1\|4691679_4692141_-\|PIN-domain-containing-protein	gnl\|CDD\|379205	pfam13470, PIN_3, PIN domain. Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).	5.99165e-12
NZ_CP014771.1\|WP_068342100.1\|4684480_4684774_+\|transcriptional-regulator	gnl\|CDD\|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	3.68611e-31
NZ_CP014771.1\|WP_071955532.1\|4690979_4691606_-\|DUF4304-domain-containing-protein	gnl\|CDD\|379489	pfam14137, DUF4304, Domain of unknown function (DUF4304). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 154 and 223 amino acids in length.	4.00043e-13
NZ_CP014771.1\|WP_068342097.1\|4682701_4683472_-\|DUF4197-domain-containing-protein	gnl\|CDD\|379394	pfam13852, DUF4197, Protein of unknown function (DUF4197). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 228 and 249 amino acids in length.	1.33116e-103
NZ_CP014771.1\|WP_068342086.1\|4676193_4677312_+\|hypothetical-protein	gnl\|CDD\|377511	pfam05426, Alginate_lyase, Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.	2.29026e-21
NZ_CP014771.1\|WP_068342091.1\|4680026_4680533_+\|TonB-dependent-receptor-plug-domain-containing-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	3.03126e-08
NZ_CP014771.1\|WP_068342095.1\|4681677_4682469_-\|hypothetical-protein	gnl\|CDD\|180466	PRK06202, PRK06202, hypothetical protein; Provisional.	2.7398e-06
NZ_CP014771.1\|WP_082808916.1\|4688561_4690970_+\|penicillin-binding-protein	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	3.14135e-139
NZ_CP014771.1\|WP_068342102.1\|4686648_4687434_+\|hypothetical-protein	gnl\|CDD\|153103	cd01044, Ferritin_CCC1_N, Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain. Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.	0.00406106

>NZ_CP014771.1|WP_068342102.1|4686648_4687434_+|hypothetical-protein
MTFTDFKTYFEANQGHYADLAWDDPHQLTAAELRAVRASLQTFQRGESSEGHFLYARAKRLGDDEYLAAMRLFIKEEQTHAAVLGRFLDQQGISRLRGHWLDTVFRGLRRVLSLEHTLRVLLTAEVVAAVYYRALFSATYSGLLQQLCRRIMLDEEMHLNFQCFTLRHLSAGRRGVGNWLRRHAYRALMAGAALAAYAASRPTLRAGGYGLLSFLAAIAAEYRRVEGMQRAGALIAVRGGQPVAPVVAGPLGAWQWPTFAR
>NZ_CP014771.1|WP_068342101.1|4684955_4686566_+|DUF4173-domain-containing-protein
MNPTASWSAPAAAAPTPIYRISTLLGSLLVLATGLSDYLFWSQSLGLNVLVYLVFLVGAHLALLPRYAPVRRTAGFWVALAGCLLSGGLVAWYGSGAAALAALVSGLLLVGLVSQPPLRLVSSAVLTAALGVGPAVRAVLGNVRAPRQVGRRLRRGWFYARLLGLPLLAFVVFQTLFAVANPQYGALSARFLGALGDWLGRLLDAISVPHVLFLLLCGVGAAGALVAVPVHFFTDYEARFGEFVGRQRDGVASLGVRRPDFRRTDRRLLDLRKEWLAAVACFGLLNALLLLVNAVDIRWLWFGFEPAPDFDLTQFVHEGTYVLIFSILLAAGIMLWFFRRNLNFYQPGLPLLRWGATLWTGQNLVLAVSVGLRNYYYIVHTGLAYKRIGVYAFLLLTAYGLGTLLLKIWRRRSTFSLVRLNSWAAYAVLLALAAGNWEIWIAEYNLQSRFPRLDIGFLLAMPPRVLPVLAAHEAALDQVNYLSAADGDGYTVPIERAEAHRQLRQRLLAFRNAYPLQNWQSRTGANERAYAALVGH
>NZ_CP014771.1|WP_068342100.1|4684480_4684774_+|transcriptional-regulator
MKYAIHTLNKAFDHRVRLGVMAVLLANESVSFNDLKESLDLTDGNLASHVAALEKAGYVLVSKQFIGKKPNTTYVATIEGKAAFQAHLAALEKLLRG
>NZ_CP014771.1|WP_068342098.1|4683785_4684484_+|hypothetical-protein
MKPAAQDPLAQLTEIRAIMERSSRFLSLSGLSGVGAGVVALAGVLLLEGVISIDYEHEASTGFSHFVALLERDPALRALWLWPLLGLAVGMIVLALLVAAFFTLRRTRREGLRSLWTAPARRLLAALAIPLVAGGLFCLELYMRGAVALVVPGLLVFYGLALLNGGKYTLDEIKYLGLTLVALGLVALLLPSYGLLLFGAGFGLGHIGYGLLMYNRYERPLPAKAGKPNFAP
>NZ_CP014771.1|WP_068342097.1|4682701_4683472_-|DUF4197-domain-containing-protein
MKNRLLLVTVALLGFTLTAHAQFSLPSSIGGFKLPVRKTTTTTTTTTTTGVAGLTNTEAANGLKEALIQGISKGADQASATDGFNLNKLIRIPFPPDAQRVATTLRSIGLGSQVDKFELSLNRGAEDAAKSAKPIFLNAIKSLTFTDVWNILTGQKDAATQYLKRTTTSQLTTAFAPIMQQSLDKVDATKYYTSLTTIYNRLPLVTPVQTNLNQYATDRAVDGLFTLIAQEEADIRANPVARTTSLLKKVFGIGGN
>NZ_CP014771.1|WP_068342095.1|4681677_4682469_-|hypothetical-protein
MKLRLRLFEFEDLPWFPAVIRAGMMDYLRFMISRLGTYRPVAPLLAEALRRTAQTHLLELGAGAGGGTETVLAALRAQQMPTATITLTDLYPQPAAWADVARRTHSAIRGLPTPLDALQVPADQPGFRVIFSAFHHFAPPQAEALLRDAVAGGVGVGVFEGAAKSWLEIGLALTVLPAAQLLLTPFFRPFRLSNLVFTYLLPIIPLATIWDGTVSILRMYPPEELLALAHRADPTGRYYWCAGQLRHWWGPRVTYLIGVPCSS
>NZ_CP014771.1|WP_082808915.1|4680529_4681345_-|prenyltransferase
MPVFWFGLSALRAPFGWGRAATGFAILHLLVYPASNGYNSYYDKDEGSIGGLKAPPPVTPELLHLVWLFETLALVASLLLGWPFAAMVVVYILVSRAYSYEGIRLKKYPLLSTVVVVIFQGAFTFLMAQVGVGATSAQLAEPSNLRLALVSTLFLCGSYPLTQIYQHQEDARRGDRTLSLRLGIRGTFGFAAGGLLAGALLMGLTYWQRGELQNLLIFLVATGPVVTLFSRWAWLAWRDPALANFEWTMRMNQVSSVCLSLAFLAMLLCGH
>NZ_CP014771.1|WP_068342091.1|4680026_4680533_+|TonB-dependent-receptor-plug-domain-containing-protein
MTTFSTRNYLLAALLGVGQLAYGQAAPFRYPPAVRSDAWMDSARRLPLPQQLAAVRARMLADTVLRHPQQYACITLFSAAQRAAYDQAQRPREQAEAARPAGSLLLYMVDGESLATNYPAPTNAFLQKMAAYAVQHIEFLSGPMATAIYGSRGANGVVILSGSPPRHR
>NZ_CP014771.1|WP_068342088.1|4677666_4679925_+|transcription-termination-factor-Rho
MYTLNELKDRLLSELKEVAEQLNVGNFKRLSKQDLIYKILDHQASLPTGQLPDKKPTPPPAAEAPAPASAAPAEAEAAPARGSRGGAGRRRSSADETPGELPFSDVAAPAPVVAKPAETAEPAAVVTEETSQPTRLEKVEADEEAVANVSVQAEEATVPPTETNPTAETHSADENSPPRRERRERVDRAGRPLPRREPGQPVAAAGGSAPVASSDTAQPEPEAVADTYADRRETREQRFERENRDGRDSRDPRDNAPRLGRNDQPRNEFRENREPRENRDNNGQPRQPNGVGATDQPRLSREERYAQREAQRQQRREERQRTGADGQPVAVEQPAGSQQNASGQPQQERRDDGPRQPQPERRDDGQRQPQQAPRPARAPELDLVVPGSGTMELMADGGYGFLRSPYYNYLSSPDDIYVSPQQVRQFGLKAGDTVSCTMRPPRENEKYFALVNVENINGRTVEEVRDRVPFSHLTPLFADEKLKLSTKPTQVSTRVLDLFAPIGKGQRGLIVAQPKTGKTVLLQEIANAISENHPEVYLIILLIDERPEEVTDMARSVKAEVLSSTFDEMADRHVKIAELALDKARRLVECGHDVVILLDSITRLARAYNTVQPSSSRILSGGIDAGALQKPKRFFGAARNIEGPGSLTIIATALIETGSKMDEVIFEEFKGTGNMELQLDRKLANKRVFPAIDIPASGTRREDLLMSRDELSRVWVLRKFMTDMSATEAMEFLKDRMKGTKDNEEFLLAMNG
>NZ_CP014771.1|WP_068342086.1|4676193_4677312_+|hypothetical-protein
MRLTQPHLLLALCALCGANLAPAMPIQVPTPLGSAETAADQPGAMVLLNANDISNLRRTKEAYAALIRAGTAQLAYVPQPVAVLAPDPHYTADGVNESGNTAKQLAADAQVAYRAGLCYLLTTDPRFAATAQRILDAWAGTLRQVGMPQGKADVNFNLPYMIMAASWVRGVGGWNSASFDQFLRTTVLPVSQAANPRNHGLWGVLLDASAAAYLGDAPRLRAASARWQQLLRGEVAADGTLPEEMQRSGTSNWRGGPDKGFKGLAYTHYALLPASLAAKIFADQGQPVWRTRGGLLLQAAFARAAAWTLHPDTFPYFASNGGHLEGVRNAAYFALLLHYYPNQDAEAVLRQGNVGMNGFQLLELFGPPPAGQ
>NZ_CP014771.1|WP_068342104.1|4687637_4688042_+|hypothetical-protein
MARTLLLFILAIAIVLELALTVGAFFFPAATLAQFGVVYGPETTFLAFLTGWFLLFVTLAAGLAWQWVRQRHAGYAGLCYLLGIWWIGIGIGIFVVFGKPDNLLLDSLKGVFIVLLTWRSQLGDSVRPTPALTA
>NZ_CP014771.1|WP_068342106.1|4688048_4688510_+|hypothetical-protein
MNQTLPHPTPRSRPAMRHEPKQLSRLGQVLAGLQLAKETLTIVLLGVPLLLAQPVLAPAAVPGVVLYLFRWVMVLGRIRRRAAAGIWFFTLIDELWGLSLYLHAYDEPTARQLRYLKWSVGLGLTFTLAALAEIGYQRYREGRRLRRALLRAA
>NZ_CP014771.1|WP_082808916.1|4688561_4690970_+|penicillin-binding-protein
MADENLPPAASDSTPARPAASRPSLKRPGRGTRRLVRIAWTLFFIGVGFFLTYPLLVRSNFLFLFGKSPSLEELENPKVEQPSQVFTADGVLMGRYFRENRSPVRLREMSPWLVKALIATEDARYYDHSGIDAPSLAASIYYGLRGDKRGGSTISQQLAKNLYKTRRAENRGALSHIPGVGTMVAKTKEWITAVELERRYTKREILRMYLNTVEYGSNAFGIKVAAKTFFSTSPDSLNAVQAATLVGLLNNPTAFNPRFHPAASRRRRNVVLQRLGQAGDLKLAEVKALQAEPIVLDYQVEKHVDGPDNYFRGAISQTVNHWCEAHGYDMYRDGLRIYTTLDSRMQDHAEQAVHQRMKMLQQQFDSFWRNRDENPWVDEEGHEIPGFIETQMKRTQSYHSLAARYQGQPARLDSALHAKRPMKVFTWKKQDGDTTLVLSPLDSLAYYKRFLQAGMMTMDPFTGSIKAWVGGLDYRFFQYDHVKQGKRQAGSTFKPFVYLTALANGYSPCDRIRDQRVTINYVENGKPMEWQPDNVTREYTGINMTLRSAMARSVNSVTAQLTEKVGWGKVAEYAHKVGITSPLLPVPSIGLGSAGDVSVYEMVDAYATFLNNGFRSEPRLITRIEDRNGNVIQQFDPVQHRAITPETAWLMTYMLRGGMEEPGGTSQGLWDFQDLWRKDNQIGGKTGTTSNYSDGWYMGITKDLVSGIWVGGEDRSIHFFRSQQGEGGRMALPIFGRYMESIYKDKSLSYDYGPFPKAPAGLKRKYVCYTEYEPRHRAEAIDTLAADNLLDQLNRGGRDSVQ
>NZ_CP014771.1|WP_071955532.1|4690979_4691606_-|DUF4304-domain-containing-protein
MADLNLVFDQLVKATLWPKFKALGYKKSGNNFRYYNPDGWGRIVQFQKSQSNSTDSLAFTVNIGFYLKIFERYLSGQESGPKFQEVVCAVRKRYGKLKSSPSDSWIELTDTSDMAKISQQLVDDFTQYVHPYLFSIKGREDIYAFLIAGHHSDYPAAQIETMFHAGYQQEALNLFTSEFARSKTNKHYRNTLKSIARELKLPMELWTE
>NZ_CP014771.1|WP_082808917.1|4691679_4692141_-|PIN-domain-containing-protein
MLRRVALGSHANQIPPVKHYFLDTNVVFDFLLARRPFVGPATQLMELGTKGALQLSVSSLSFSTVYYLMRRHGTAEIEVMSALSELARVVLIAPVTAEMVRQALSAGLPDFEDAVQLFAALHVRANALVTRDPKGFPTPQVPVLNPLAALAQL
>NZ_CP014771.1|WP_068342109.1|4692089_4692416_-|hypothetical-protein
MFTKEQLLQIMPEVPAEFSIEELEAILKQPQPAAPPAYVLPPRPANLTPQEAAEWDYYTSPEAQALYNKFPVSPAVAALRGSLKLKPEDEHKSYDELRWEAMRTKYHL
>NZ_CP014771.1|WP_157550659.1|4692550_4692697_-|hypothetical-protein
MKKLLILTVGAATFGLGACSRSTCPAYTSAKAKAAPVTASTATAIERQ
>NZ_CP014771.1|WP_068342111.1|4692853_4694275_-|arginine-decarboxylase
MDTYQDLITQTFDFPNADFQVRDNELFFHDIDLMALVKKHGTPLRLTYLPKISSQIQRAKKWFADGIAETGYTGSYSYAYCTKSSHFRFVLDEALKNDVHLETSSWFDISIIRSLYEQGKFDKAKYIICNGFKTEEYKHDITALLNDGFANCTPILDSPNEIDYYTAHVNAGTKVKMGLRLASDEEPRFQFYTSRLGIRYADAVPIFEQKIKNDPRFELTMLHYFISTGIKDTSYYWSELSRFIHKYCELRKICPSLQTIDIGGGLPIQTSIQLEYDYPYMIAEILRTIQRICAEEGVPEPNIFTEFGIFTVGESGATIYSILDEKLQNDKELWYMIDGSFITNLPDTWALNQRFIMLALNGWQRPYRKIQLGGLTCDSQDYYNSEKHIYQTFLPQLQPARSQPATDEPIYVGFFHTGAYQESLSGYGGIKHCLIPAPKHVILDRAADGTLTDTVFAPKQEAASMLKILGYTE
>NZ_CP014771.1|WP_068342114.1|4694642_4695617_+|arginase
MKRIKLIEVRSELGAGTRGASLGPDALRVACLNKGSDYFRRYNAVVTQDLNHVLFDKNSFAHAKHIDAIYTVQKGIASAVEQTLRFGEFPLVLAGDHSSANATIAGIKAAYPHKKLGVIWIDAHADIHSPYTTPSGNVHGMPLAAALGEDNRPCQRNQPDADTEFFWRRLQNLAEPGPKVLPEHLVYVAVRDTEPEENAIIERLHIKWIKLDEFQAKGSRQLTREIYEHLRFCDLVYISFDVDSLDSEFSKGTGTPVEKGLYLSEAENLCQDLLENERVVCFEMVEINPTLDNENTMAKNAFNILEKATAAIERRLRMDEVVSR
>NZ_CP014771.1|WP_068342116.1|4695685_4697482_+|arginine--tRNA-ligase
MQQLEQTLQTALQAAAQATFGQEIPAASLVLQPTRKDFAGSFTLVTFPLTKAFGKGPEAIGQALGEWLQAHAPAVRGYNVVKGFLNLEIADAEWLKLFGELLSQPAGAPVPFDGPKNVVVEYSSPNTNKPLHLGHLRNNFLGYSVAEILKATGATVTKANLVNDRGIHICKSMIAYQRFGEGTTPASAGLKGDHLAGKYYVLFEKHYREEIRQLEAEGVANEIAKKQAPLMLEAQQMLQQWEAGDEEVMALWHRMNGWVYDGFNATYANIGVDFDKFYYESGTYLLGKERVAEGLQKGVFFQKENGSVWVDLQAEGLDEKLLLRADGTSVYITQDLGTAELKYQDFGYDSSIYVIADEQNYHMQVLQATLKKLGKSYADAIHHLSYGMVDLPSGKMKSREGTVVDADELVKEVEEAAKAATLEKGKTEGLGDEELTQLYHTLGLGALKYYLLKVDPKKRMLFNPEESVRLEGDTGPFIQYSYARISSIRRKALEQGVAEITDFSQLDALQPTEQELIQQLAGYAGVVAEAARSLSPAVVAQYAYDVAKSYNRFFTEVPILKEDINPLKKAFRVALSDKTAEILKTSLGLLGIDVPERM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP031652	Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence	91724-91750	4	0.852
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP031652	Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence	30140-30166	4	0.852
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP024427	Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence	84357-84383	5	0.815
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	94275-94301	5	0.815
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP044079	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence	210909-210935	5	0.815
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	AP018323	Nostoc sp. HK-01 plasmid plasmid5 DNA, complete genome	10507-10533	5	0.815
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP021119	Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence	52860-52892	6	0.818
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	MG770379	Klebsiella virus vB_KpnM_KpS110, complete genome	141250-141276	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	MK024806	Proteus phage Mydo, complete genome	103691-103717	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	MT178275	Klebsiella virus KpS8, complete genome	50850-50876	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NC_048647	UNVERIFIED: Klebsiella phage KNP2 genomic sequence	41594-41620	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	MT939253	Klebsiella phage vB_KpnM_Seu621, complete genome	50813-50839	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	KX452695	UNVERIFIED: Klebsiella phage KPN2 genomic sequence	41594-41620	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NC_048656	Klebsiella phage vB_KpnM_BIS47, complete genome	33702-33728	6	0.778
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NC_028659	Klebsiella phage vB_KpnM_KB57, complete genome	51640-51666	6	0.778
NZ_CP014771_1	1.12\|790617\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790617-790652	36	NZ_CP022420	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence	45277-45312	7	0.806
NZ_CP014771_1	1.12\|790617\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790617-790652	36	NZ_CP031601	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence	124660-124695	7	0.806
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	210195-210227	7	0.788
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	6592-6624	7	0.788
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	482689-482721	7	0.788
NZ_CP014771_1	1.53\|793289\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	793289-793323	35	NZ_LR594663	Variovorax sp. RA8 plasmid 2	396579-396613	7	0.8
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP034674	Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence	9709-9735	7	0.741
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP034674	Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence	26954-26980	7	0.741
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP034674	Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence	44227-44253	7	0.741
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	MK816297	Pseudomonas virus PBPA162, complete genome	38768-38794	7	0.741
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	345748-345774	7	0.741
NZ_CP014771_8	8.1\|2847016\|27\|NZ_CP014771\|CRISPRCasFinder	2847016-2847042	27	JQ809663	Stenotrophomonas phage Smp131, complete genome	17071-17097	7	0.741
NZ_CP014771_1	1.17\|790943\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790943-790977	35	MN703409	Arthrobacter phage LittleTokyo, complete genome	16271-16305	8	0.771
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	324403-324435	8	0.758
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1197074-1197106	8	0.758
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP054625	Cupriavidus gilardii strain FDAARGOS_639 plasmid unnamed1, complete sequence	32516-32548	8	0.758
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	CP030179	Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence	18056-18088	8	0.758
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	24148-24180	8	0.758
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	589084-589116	8	0.758
NZ_CP014771_1	1.41\|792506\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	792506-792540	35	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	79328-79362	8	0.771
NZ_CP014771_1	1.129\|798248\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	798248-798282	35	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	553539-553573	8	0.771
NZ_CP014771_1	1.129\|798248\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	798248-798282	35	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	147072-147106	8	0.771
NZ_CP014771_4	4.1\|1275130\|30\|NZ_CP014771\|CRISPRCasFinder	1275130-1275159	30	NZ_CP024792	Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence	240710-240739	8	0.733
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	671854-671886	9	0.727
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP033220	Parasedimentitalea marina strain W43 plasmid pW43A, complete sequence	124745-124777	9	0.727
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	142809-142841	9	0.727
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	MK524516	Mycobacterium phage Bobby, complete genome	64807-64839	9	0.727
NZ_CP014771_1	1.37\|792244\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	792244-792278	35	MT639646	Microbacterium phage Rasputia, complete genome	47166-47200	9	0.743
NZ_CP014771_1	1.57\|793548\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	793548-793583	36	NZ_CP023451	Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence	18897-18932	9	0.75
NZ_CP014771_1	1.113\|797203\|38\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	797203-797240	38	NZ_CP021116	Rhodobacteraceae bacterium strain G7 plasmid unnamed2, complete sequence	226813-226850	9	0.763
NZ_CP014771_1	1.129\|798248\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	798248-798282	35	MT771340	Mycobacterium phage Jorgensen, complete genome	21904-21938	9	0.743
NZ_CP014771_1	1.131\|798377\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	798377-798412	36	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	156153-156188	9	0.75
NZ_CP014771_1	1.17\|790943\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790943-790977	35	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1379153-1379187	10	0.714
NZ_CP014771_1	1.17\|790943\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790943-790977	35	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1357131-1357165	10	0.714
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NC_015951	Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence	288872-288904	10	0.697
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	878638-878670	10	0.697
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	67028-67060	10	0.697
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	46732-46764	10	0.697
NZ_CP014771_1	1.21\|791205\|33\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791205-791237	33	NZ_CP026519	Deinococcus sp. NW-56 plasmid unnamed3, complete sequence	61493-61525	10	0.697
NZ_CP014771_1	1.24\|791398\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791398-791433	36	NZ_CP021815	Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence	85018-85053	10	0.722
NZ_CP014771_1	1.24\|791398\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	791398-791433	36	NZ_CP021796	Sinorhizobium meliloti strain USDA1157 plasmid accessoryA, complete sequence	26048-26083	10	0.722
NZ_CP014771_1	1.41\|792506\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	792506-792540	35	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	32637-32671	10	0.714
NZ_CP014771_1	1.83\|795245\|37\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	795245-795281	37	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	495364-495400	10	0.73
NZ_CP014771_1	1.96\|796094\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	796094-796128	35	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	419988-420022	10	0.714
NZ_CP014771_1	1.17\|790943\|35\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	790943-790977	35	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	52742-52776	11	0.686
NZ_CP014771_1	1.50\|793093\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	793093-793128	36	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	154072-154107	11	0.694
NZ_CP014771_1	1.117\|797466\|36\|NZ_CP014771\|CRISPRCasFinder,CRT,PILER-CR	797466-797501	36	MN693509	Marine virus AFVG_25M367, complete genome	13725-13760	12	0.667

1. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP031652 (Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.852

cattcttcaacctgttcaacgacgggc	CRISPR spacer
cctttttcaacctgctcaacgacggcc	Protospacer
* **.*********.********** *

2. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP031652 (Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.852

cattcttcaacctgttcaacgacgggc	CRISPR spacer
cctttttcaacctgctcaacgacggcc	Protospacer
* **.*********.********** *

3. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP024427 (Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence) position: , mismatch: 5, identity: 0.815

cattcttcaacctgttcaacgacgggc	CRISPR spacer
gcttcttcaacctgttcaacggcgcgg	Protospacer
  *******************.** *

4. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP020443 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

cattcttcaacctgttcaacgacgggc	CRISPR spacer
gcttcttcaacctgttcaacggcgcgg	Protospacer
  *******************.** *

5. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP044079 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

cattcttcaacctgttcaacgacgggc	CRISPR spacer
gcttcttcaacctgttcaacggcgcgg	Protospacer
  *******************.** *

6. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to AP018323 (Nostoc sp. HK-01 plasmid plasmid5 DNA, complete genome) position: , mismatch: 5, identity: 0.815

cattcttcaacctgttcaacgacgggc	CRISPR spacer
cattattcaaccttttcaacgactaac	Protospacer
**** ******** ********* ..*

7. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021119 (Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.818

ctggccgccgccgtgcgccgccgccgctactgc-	CRISPR spacer
cgcgccgccgccgtgcgccgcggtcgc-gctgcc	Protospacer
*  ****************** *.*** .****

8. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to MG770379 (Klebsiella virus vB_KpnM_KpS110, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcggtttcaaccttttcaacgacgggc	Protospacer
.   .******** *************

9. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to MK024806 (Proteus phage Mydo, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

10. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to MT178275 (Klebsiella virus KpS8, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

11. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

12. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to MT939253 (Klebsiella phage vB_KpnM_Seu621, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

13. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

14. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NC_048656 (Klebsiella phage vB_KpnM_BIS47, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

15. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 6, identity: 0.778

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tcttctacaacctgttcaacaacggtt	Protospacer
. **** *************.**** .

16. spacer 1.12|790617|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022420 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence) position: , mismatch: 7, identity: 0.806

ggaccgcc--gaaggccaggcggcgcgtcgcctcggac	CRISPR spacer
--aacgccgtgaaggccaggccgcgcgtggcctcggtg	Protospacer
  * ****  *********** ****** *******

17. spacer 1.12|790617|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031601 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence) position: , mismatch: 7, identity: 0.806

ggaccgcc--gaaggccaggcggcgcgtcgcctcggac	CRISPR spacer
--aacgccgtgaaggccaggccgcgcgtggcctcggtg	Protospacer
  * ****  *********** ****** *******

18. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
ctggcggccgccgtgcgccgccgcgaccgccgg	Protospacer
***** ****************** .*..*.*

19. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 7, identity: 0.788

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gcggccggcgccgttcgccgccgccgcgatcgc	Protospacer
 .***** ****** ************ *..**

20. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.788

ctggccgccgccgtgcgccgccgccgc-tactgc	CRISPR spacer
cacgccgccgccggtcgccgccgccgcgcaccg-	Protospacer
*  **********  ************ .**.*

21. spacer 1.53|793289|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 7, identity: 0.8

cagcgggtgggcc-tgctggcccccggcgtgtaccg	CRISPR spacer
-cgcggcccggccgtgctggcccccggcgtgtacga	Protospacer
  **** . **** ******************** .

22. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP034674 (Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
agttcttcaacctgttcaatgaccacg	Protospacer
 .*****************.*** .

23. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP034674 (Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
agttcttcaacctgttcaatgaccacg	Protospacer
 .*****************.*** .

24. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP034674 (Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
agttcttcaacctgttcaatgaccacg	Protospacer
 .*****************.*** .

25. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to MK816297 (Pseudomonas virus PBPA162, complete genome) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
tggacttcaacctgttcaaggacggca	Protospacer
..  *************** *****

26. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
aggtcttcaacctgtccaacgacgcta	Protospacer
 . ************.********

27. spacer 8.1|2847016|27|NZ_CP014771|CRISPRCasFinder matches to JQ809663 (Stenotrophomonas phage Smp131, complete genome) position: , mismatch: 7, identity: 0.741

cattcttcaacctgttcaacgacgggc	CRISPR spacer
agaatctcaacctgttcaacgacggcc	Protospacer
 .  ..******************* *

28. spacer 1.17|790943|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to MN703409 (Arthrobacter phage LittleTokyo, complete genome) position: , mismatch: 8, identity: 0.771

gtggccgccgcgggcctggtgctggtggtctggga	CRISPR spacer
gcgttcgccgtgggcctggtgctggcggtcggcgg	Protospacer
*.* .*****.**************.**** * *.

29. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
cctgccgccgccgggcgccgccgccgccggcac	Protospacer
*. ********** *************.. ..*

30. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
cgagccgccgccgcgcgccggcgccgcccacgc	Protospacer
* .**********.****** ******.  .**

31. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054625 (Cupriavidus gilardii strain FDAARGOS_639 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
ccgcggacggccgtgcgctgccgccgctgctgc	Protospacer
*.*   .* *********.*********.****

32. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to CP030179 (Xanthomonas citri pv. punicae strain LMG 859 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgcc----gctactgc	CRISPR spacer
ctggccgccgccgggcgccgacgcttgaggcaa----	Protospacer
************* ****** ***.    ** *

33. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
cgcgccgccgcgctgcgccgccgccgcgaagac	Protospacer
*  ********  ************** *  .*

34. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 8, identity: 0.758

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
tgcgccgccgccgttggccgccgccgccagcgc	Protospacer
.  ***********  ***********.* .**

35. spacer 1.41|792506|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

cagatgcacctccccggcggcccggaccacgactt	CRISPR spacer
cagatgcgcctccccggcggcccggcagcgggcct	Protospacer
*******.*****************     *.*.*

36. spacer 1.129|798248|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

agcgcctgctggctggcctggtcc---gtgcggttctt	CRISPR spacer
agcgcctgctggcgggcctggaccgaggcgcggaa---	Protospacer
************* ******* **   *.****

37. spacer 1.129|798248|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.771

agcgcctgctggctggcctggtcc---gtgcggttctt	CRISPR spacer
agcgcctgctggcgggcctggaccgaggcgcggaa---	Protospacer
************* ******* **   *.****

38. spacer 4.1|1275130|30|NZ_CP014771|CRISPRCasFinder matches to NZ_CP024792 (Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence) position: , mismatch: 8, identity: 0.733

atcgctcgtcgctgaacgattggtgctcga	CRISPR spacer
tgccctagccgctgaacgattggtgctaat	Protospacer
  * ** *.****************** .

39. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 9, identity: 0.727

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
ctggccgccgacctgcgccgccgcgagatgttc	Protospacer
********** * *********** .    * *

40. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033220 (Parasedimentitalea marina strain W43 plasmid pW43A, complete sequence) position: , mismatch: 9, identity: 0.727

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gccgccgctgccctgcgccgccgccgcttccag	Protospacer
 . *****.*** *************** *..

41. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gacgcggccgccgcgcgccgccgccgcgcccgt	Protospacer
   ** *******.*************  *.*.

42. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to MK524516 (Mycobacterium phage Bobby, complete genome) position: , mismatch: 9, identity: 0.727

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
agagccgccgccgcgcgccgccaccgcgtctta	Protospacer
  .**********.********.****  **

43. spacer 1.37|792244|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to MT639646 (Microbacterium phage Rasputia, complete genome) position: , mismatch: 9, identity: 0.743

tccccgtccccgtggccgtcagcaagtaactcgcc	CRISPR spacer
gccccgtgcccgtggccgtcagcgagccgggagcc	Protospacer
 ****** ***************.**. .   ***

44. spacer 1.57|793548|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023451 (Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.75

tgctgtaccaggtccagcccaaggccttcattacgc	CRISPR spacer
ttctgtaccaggtccagccaaaggccgtcgcgagcg	Protospacer
* ***************** ****** **.. *

45. spacer 1.113|797203|38|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021116 (Rhodobacteraceae bacterium strain G7 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.763

gccatcagcaacagcgttgcaagaagcatactgagcgg	CRISPR spacer
gtcaccagcaacagcgttgcaacaagcatacgcaatac	Protospacer
*.**.***************** ********  *...

46. spacer 1.129|798248|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to MT771340 (Mycobacterium phage Jorgensen, complete genome) position: , mismatch: 9, identity: 0.743

agcgcctgctggctggcctggtccgtgcggttctt	CRISPR spacer
ggtcgctgctgaccggcctggtccgtgcggtgatg	Protospacer
.*.  ******.*.*****************  *

47. spacer 1.131|798377|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 9, identity: 0.75

accgcgtcgtcgatggtctgggtatcgaggtgcagc	CRISPR spacer
agccgttcgtcgatgcgctgggtatcgaggtggatg	Protospacer
* *   *********  *************** *

48. spacer 1.17|790943|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 10, identity: 0.714

gtggccgccgcgggcctggtgctggtggtctggga	CRISPR spacer
ggcggcgccgcggccctggtgctgctggtcgtcac	Protospacer
*  * ******** ********** *****   .

49. spacer 1.17|790943|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 10, identity: 0.714

gtggccgccgcgggcctggtgctggtggtctggga	CRISPR spacer
ggcggcgccgcggccctggtgctgctggtcgtcac	Protospacer
*  * ******** ********** *****   .

50. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_015951 (Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence) position: , mismatch: 10, identity: 0.697

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gaggccgcggccgtacgccgccgccgtgcgggt	Protospacer
  ****** *****.***********.    *.

51. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 10, identity: 0.697

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gcggcctccgccgtgcgccgcagccggctcacg	Protospacer
 .**** ************** **** . *

52. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
ggcgccgccgccattcgccgccgccgccagcag	Protospacer
   *********.* ************.* ..

53. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
gagttgcccgccgtgcgccgccgcccccacttg	Protospacer
  * .  ****************** *.***

54. spacer 1.21|791205|33|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026519 (Deinococcus sp. NW-56 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

ctggccgccgccgtgcgccgccgccgctactgc	CRISPR spacer
ctgtccgccgccctgcgccgccgcgaaggcgag	Protospacer
*** ******** *********** .  .* .

55. spacer 1.24|791398|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021815 (Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.722

cagccgcacacgagggcgcaggctttccagtagccg	CRISPR spacer
gggccgcacgcgacggcgcaggctttccggatggtt	Protospacer
 .*******.*** **************.*  * .

56. spacer 1.24|791398|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021796 (Sinorhizobium meliloti strain USDA1157 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.722

cagccgcacacgagggcgcaggctttccagtagccg	CRISPR spacer
gggccgcacgcgacggcgcaggctttccggatggtt	Protospacer
 .*******.*** **************.*  * .

57. spacer 1.41|792506|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 10, identity: 0.714

cagatgcacctccccggcggcccggaccacgactt	CRISPR spacer
tcggcggtcctgcccggcggcccggaccccgacgc	Protospacer
. *..*  *** **************** **** .

58. spacer 1.83|795245|37|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.73

cggtcgaaccccgcctggaccccggcccaggcccacc	CRISPR spacer
tggttgcaccccgcctggaccccggccgcaatctaac	Protospacer
.***.* ********************  ...*.* *

59. spacer 1.96|796094|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.714

ggcaagaatgagcgcggccacaacaccgtcgaaaa	CRISPR spacer
cgctgacttgagcgcggccacaacggcgtcgaatg	Protospacer
 ** ..  ****************. ******* .

60. spacer 1.17|790943|35|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

gtggccgccgcgggcctggtgctggtggtctggga	CRISPR spacer
gccatcgccggtggcctggtgctggtggtcatcac	Protospacer
*. ..*****  ******************   .

61. spacer 1.50|793093|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 11, identity: 0.694

gactgccgaccgggccgagtacgtggatattcagaa	CRISPR spacer
ccgggccgaccgggacgagtacgtggagatcctttg	Protospacer
    ********** ************ **.*   .

62. spacer 1.117|797466|36|NZ_CP014771|CRISPRCasFinder,CRT,PILER-CR matches to MN693509 (Marine virus AFVG_25M367, complete genome) position: , mismatch: 12, identity: 0.667

gcgttggagtgactcctgtgcaacattttttagcct	CRISPR spacer
ctacaacagggactcctgtgcaatattttttagaga	Protospacer
 ... . ** *************.*********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2870138 : 2919621

Ostreococcus_lucimarinus_virus(20.0%)

integrase,transposase,protease,tRNA

attL 2886213:2886229|attR 2930367:2930383

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068338415.1\|2870138_2870543_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_068338418.1\|2870635_2871589_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_071955369.1\|2871789_2872275_+	hypothetical protein	NA	NA	NA	NA
WP_068338422.1\|2872372_2873068_+	hypothetical protein	NA	NA	NA	NA
WP_068338424.1\|2873061_2873976_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_068338426.1\|2874133_2875129_-	aldo/keto reductase	NA	NA	NA	NA
WP_068338429.1\|2875253_2876303_-	aldo/keto reductase	NA	NA	NA	NA
WP_068338431.1\|2876772_2878152_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_068338433.1\|2878192_2879098_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_068338435.1\|2879326_2879821_+	hypothetical protein	NA	NA	NA	NA
WP_068338437.1\|2879898_2881845_+	OmpA family protein	NA	NA	NA	NA
WP_068338439.1\|2881975_2883049_+	DUF4476 domain-containing protein	NA	NA	NA	NA
WP_157550416.1\|2883072_2883258_+	hypothetical protein	NA	NA	NA	NA
WP_071955371.1\|2883277_2883754_-	DUF4293 domain-containing protein	NA	NA	NA	NA
WP_068338444.1\|2883850_2885053_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_068338446.1\|2885337_2886618_+	kynureninase	NA	NA	NA	NA
2886213:2886229	attL	NA	NA	NA	NA
WP_068338448.1\|2886686_2887340_+	hypothetical protein	NA	NA	NA	NA
WP_068343467.1\|2887420_2888083_-	phosphatidylserine decarboxylase family protein	NA	NA	NA	NA
WP_068338450.1\|2888373_2889663_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_068338452.1\|2889805_2890789_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_068338454.1\|2890831_2891875_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_068338456.1\|2892068_2893058_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_157550417.1\|2893087_2893342_-	hypothetical protein	NA	NA	NA	NA
WP_068338458.1\|2893822_2895235_-	hypothetical protein	NA	NA	NA	NA
WP_082808773.1\|2895467_2896994_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	9.0e-35	26.9
WP_068338460.1\|2896994_2898509_+	glucose-6-phosphate dehydrogenase	E3SJC5	Synechococcus_phage	3.6e-84	37.4
WP_068338463.1\|2898495_2899239_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_068343472.1\|2899413_2900703_-	HD domain-containing protein	NA	NA	NA	NA
WP_068338465.1\|2901004_2905030_+	hypothetical protein	NA	NA	NA	NA
WP_068338470.1\|2905415_2906102_+	hypothetical protein	NA	NA	NA	NA
WP_157550418.1\|2906572_2906836_-	hypothetical protein	NA	NA	NA	NA
WP_068338474.1\|2906904_2907513_-	hypothetical protein	NA	NA	NA	NA
WP_082809007.1\|2907878_2908718_-	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_068338476.1\|2908675_2908864_-	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_157550419.1\|2908956_2909100_-	hypothetical protein	NA	NA	NA	NA
WP_068338478.1\|2909216_2910035_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_068338480.1\|2910083_2911115_-	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	2.2e-69	38.0
WP_082809008.1\|2911151_2913257_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_068338485.1\|2913391_2913883_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_068338487.1\|2913953_2915105_+	AhpC/TSA family protein	NA	NA	NA	NA
WP_068338489.1\|2915389_2916127_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-20	27.5
WP_068338491.1\|2916513_2916777_+\|transposase	transposase	NA	NA	NA	NA
WP_082808774.1\|2917007_2917388_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	S5WIU1	Leptospira_phage	1.0e-19	40.0
WP_082808775.1\|2917391_2917610_+\|transposase	transposase	NA	NA	NA	NA
WP_068338493.1\|2917717_2918230_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_068338495.1\|2919330_2919621_+\|transposase	transposase	NA	NA	NA	NA
2930367:2930383	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3475618 : 3535385

Pandoravirus(14.29%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068339739.1\|3475618_3476899_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_068339742.1\|3477118_3477439_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068339744.1\|3477984_3479097_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_068339747.1\|3479162_3479645_+	GAF domain-containing protein	NA	NA	NA	NA
WP_068339749.1\|3479704_3481099_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_068339752.1\|3481248_3482112_-	hypothetical protein	NA	NA	NA	NA
WP_068339754.1\|3482316_3483291_+	isopenicillin N synthase family oxygenase	S4VNP9	Pandoravirus	8.1e-21	27.4
WP_068339757.1\|3483384_3484299_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_068339760.1\|3484362_3485100_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_068339763.1\|3485245_3486463_+	chromate efflux transporter	NA	NA	NA	NA
WP_068339766.1\|3486531_3486990_+	hypothetical protein	NA	NA	NA	NA
WP_068339769.1\|3487007_3488081_-	carotenoid 1,2-hydratase	NA	NA	NA	NA
WP_082808819.1\|3488132_3489053_-	carboxypeptidase-like regulatory domain-containing protein	NA	NA	NA	NA
WP_068339775.1\|3489012_3490782_+	amino acid permease	NA	NA	NA	NA
WP_068339778.1\|3490892_3491477_+	hypothetical protein	NA	NA	NA	NA
WP_068339782.1\|3491479_3492454_+	hypothetical protein	NA	NA	NA	NA
WP_082809013.1\|3492516_3492702_+	hypothetical protein	NA	NA	NA	NA
WP_068334364.1\|3492739_3493168_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.0e-15	40.5
WP_071955170.1\|3493311_3493953_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	1.4e-13	26.7
WP_068334831.1\|3493871_3494261_-	hypothetical protein	NA	NA	NA	NA
WP_068339787.1\|3494749_3496078_+	DNA phosphorothioation system sulfurtransferase DndC	NA	NA	NA	NA
WP_071955435.1\|3496087_3497089_+	hypothetical protein	NA	NA	NA	NA
WP_068339790.1\|3497110_3498067_+	hypothetical protein	NA	NA	NA	NA
WP_157550476.1\|3499664_3500195_+	hypothetical protein	NA	NA	NA	NA
WP_068339796.1\|3500194_3500716_+	hypothetical protein	NA	NA	NA	NA
WP_157550175.1\|3500762_3501513_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082808820.1\|3501514_3502297_+	hypothetical protein	NA	NA	NA	NA
WP_068339802.1\|3502397_3503366_+\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	3.9e-07	25.4
WP_068339805.1\|3503678_3505502_-	hypothetical protein	NA	NA	NA	NA
WP_157550477.1\|3505510_3505666_-	hypothetical protein	NA	NA	NA	NA
WP_068339808.1\|3505710_3506859_-	cysteine desulfurase	A0A1X7C038	Faustovirus	5.0e-30	28.0
WP_068339810.1\|3506912_3508526_-	S8/S53 family peptidase	A0A1V0SLL0	Klosneuvirus	1.6e-90	41.6
WP_068339813.1\|3508838_3509396_+	hypothetical protein	NA	NA	NA	NA
WP_082808821.1\|3509436_3510384_+	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_082808822.1\|3510642_3511635_-	DMT family transporter	NA	NA	NA	NA
WP_068339820.1\|3511907_3512660_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_082808823.1\|3512688_3515385_-	carboxypeptidase-like regulatory domain-containing protein	NA	NA	NA	NA
WP_068339825.1\|3515506_3516841_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_082808824.1\|3517038_3518721_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_068339828.1\|3518824_3519394_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_068339831.1\|3519478_3520384_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	6.3e-44	39.8
WP_082808825.1\|3520564_3522199_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_082808826.1\|3522212_3523382_-	OmpA family protein	NA	NA	NA	NA
WP_068339841.1\|3523426_3524143_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_068339844.1\|3524336_3524789_-	hypothetical protein	NA	NA	NA	NA
WP_068339847.1\|3524859_3525393_-	hypothetical protein	NA	NA	NA	NA
WP_082808827.1\|3525420_3526017_-	energy transducer TonB	NA	NA	NA	NA
WP_068339853.1\|3526179_3526740_-	fasciclin domain-containing protein	NA	NA	NA	NA
WP_068339856.1\|3527222_3527483_+	hypothetical protein	NA	NA	NA	NA
WP_068339863.1\|3529796_3530534_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_068339866.1\|3530767_3531145_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068339869.1\|3531255_3532122_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_068339872.1\|3532221_3532665_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068332391.1\|3533121_3534111_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_068339876.1\|3534509_3534929_+	hypothetical protein	NA	NA	NA	NA
WP_082808828.1\|3534923_3535385_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

4574911 : 4602138

Cyanophage(25.0%)

integrase,transposase,protease,tRNA

attL 4581520:4581536|attR 4605170:4605186

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068341953.1\|4574911_4575424_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_068341955.1\|4575553_4576486_+	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	1.4e-41	35.2
WP_068341957.1\|4576571_4577531_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_068341959.1\|4577617_4578310_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_068341961.1\|4578371_4578785_+	hypothetical protein	NA	NA	NA	NA
WP_068341963.1\|4578856_4579861_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_068341965.1\|4579888_4580764_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_068341967.1\|4580810_4581419_-	hypothetical protein	NA	NA	NA	NA
4581520:4581536	attL	NA	NA	NA	NA
WP_068341970.1\|4581924_4582194_+	hypothetical protein	NA	NA	NA	NA
WP_157550629.1\|4582355_4584131_+	family 10 glycosylhydrolase	NA	NA	NA	NA
WP_068341973.1\|4584329_4585463_+	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_068341975.1\|4585670_4586474_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_068343805.1\|4586598_4587243_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_068341976.1\|4587316_4587670_-	hypothetical protein	NA	NA	NA	NA
WP_071955522.1\|4587772_4588084_-	hypothetical protein	NA	NA	NA	NA
WP_068341979.1\|4588378_4588642_+	hypothetical protein	NA	NA	NA	NA
WP_068341981.1\|4588799_4589504_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_068343807.1\|4589590_4590124_+	DUF2480 family protein	NA	NA	NA	NA
WP_068341984.1\|4590176_4591532_+	amino acid permease	NA	NA	NA	NA
WP_068341986.1\|4591616_4592873_+	hypothetical protein	NA	NA	NA	NA
WP_068341988.1\|4593011_4594268_+	hypothetical protein	NA	NA	NA	NA
WP_068341990.1\|4600264_4600666_+\|transposase	transposase	NA	NA	NA	NA
WP_157550631.1\|4600754_4601249_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B3AZE5	Gordonia_phage	2.8e-14	39.5
WP_157550633.1\|4601134_4601473_+\|transposase	transposase	Q6J1X2	Lactobacillus_phage	1.2e-16	46.9
WP_068337282.1\|4601634_4602138_-\|transposase	IS630 family transposase	A0A2P0VP61	Tetraselmis_virus	4.9e-06	26.7
4605170:4605186	attR	NA	NA	NA	NA

DBSCAN-SWA_4

5109924 : 5158641

Bacillus_phage(42.86%)

transposase,integrase

attL 5140741:5140756|attR 5163208:5163223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068332391.1\|5109924_5110914_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_068342728.1\|5111279_5111756_+	DUF892 family protein	NA	NA	NA	NA
WP_068342730.1\|5112064_5113039_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_068342732.1\|5113136_5113733_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_068343934.1\|5114028_5114781_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	1.2e-08	30.6
WP_068342734.1\|5114822_5115116_+	hypothetical protein	NA	NA	NA	NA
WP_068342736.1\|5115131_5115773_+	HAD family phosphatase	NA	NA	NA	NA
WP_068342738.1\|5115890_5117150_+	acetate/propionate family kinase	NA	NA	NA	NA
WP_082808954.1\|5117304_5119707_+	phosphoketolase family protein	NA	NA	NA	NA
WP_068342740.1\|5119870_5120869_+	fructose-bisphosphate aldolase class I	A0A0K0KVJ8	Prochlorococcus_phage	1.1e-70	48.1
WP_082809038.1\|5121123_5121513_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_068342744.1\|5121515_5121851_+	hypothetical protein	NA	NA	NA	NA
WP_068342746.1\|5121843_5122161_+	hypothetical protein	NA	NA	NA	NA
WP_068342748.1\|5122150_5122849_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_068342750.1\|5122882_5123158_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_071955571.1\|5123168_5124077_+	hypothetical protein	NA	NA	NA	NA
WP_082808955.1\|5124063_5125701_+	alternate F1F0 ATPase, F1 subunit alpha	NA	NA	NA	NA
WP_068342752.1\|5125768_5126677_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_068342754.1\|5126820_5128467_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_068343941.1\|5128506_5131050_+	alpha-glucan family phosphorylase	NA	NA	NA	NA
WP_068342758.1\|5131471_5131783_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068342760.1\|5132141_5133128_+	amidohydrolase family protein	NA	NA	NA	NA
WP_068342765.1\|5134220_5135126_-	hypothetical protein	NA	NA	NA	NA
WP_157550763.1\|5135149_5135305_-	hypothetical protein	NA	NA	NA	NA
WP_068342767.1\|5135604_5135919_-	hypothetical protein	NA	NA	NA	NA
WP_068343943.1\|5139126_5139315_+	CsbD family protein	NA	NA	NA	NA
WP_082808956.1\|5139739_5140726_-	MCE family protein	NA	NA	NA	NA
5140741:5140756	attL	NA	NA	NA	NA
WP_068342771.1\|5140861_5141638_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	7.1e-20	33.0
WP_068342773.1\|5141821_5142580_-	ABC transporter permease	NA	NA	NA	NA
WP_082808957.1\|5142771_5144277_+	BON domain-containing protein	NA	NA	NA	NA
WP_068342777.1\|5144489_5145542_-	response regulator	Q56AR1	Bacillus_thuringiensis_phage	3.4e-09	33.3
WP_068342779.1\|5145519_5147130_-	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.4e-17	27.4
WP_157550148.1\|5147267_5147420_-	hypothetical protein	NA	NA	NA	NA
WP_068342781.1\|5147557_5147893_+	hypothetical protein	NA	NA	NA	NA
WP_068342784.1\|5148333_5148783_+	BLUF domain-containing protein	NA	NA	NA	NA
WP_068342786.1\|5148981_5150268_+	hypothetical protein	A0A1V0SGX0	Hokovirus	9.1e-12	26.1
WP_068342790.1\|5150513_5151305_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_157550765.1\|5151498_5151882_-	hypothetical protein	NA	NA	NA	NA
WP_157550175.1\|5151922_5152673_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157550768.1\|5152771_5153056_-	hypothetical protein	NA	NA	NA	NA
WP_082808958.1\|5153258_5154770_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_082808959.1\|5154992_5155343_+\|transposase	transposase	NA	NA	NA	NA
WP_068342794.1\|5155356_5155656_+\|transposase	transposase	NA	NA	NA	NA
WP_157550771.1\|5155967_5156528_+\|transposase	transposase	NA	NA	NA	NA
WP_068342798.1\|5156541_5156880_+	HNH endonuclease	Q38137	Bacillus_phage	4.8e-05	34.5
WP_157550774.1\|5157384_5157885_+	hypothetical protein	NA	NA	NA	NA
WP_157550777.1\|5157885_5158641_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
5163208:5163223	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014769

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP014771

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection