CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014835	Streptococcus halotolerans strain HTS9 chromosome, complete genome	2 crisprs	csa3,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL,DEDDh	0	8	7	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014835_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014835_1

115110-115188

Orphan

Consensus_repeat	Method
AAACAAAATTGAAACGTTTCCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014835_1

>merge|NZ_CP014835|1|115110-115188|CRISPRCasFinder
AAACAAAATTGAAACGTTTCCAAAATATGGGTTCGTACTTATTCTTTTTTAAAAAAACAAAAATTGAAACGTTTCCAAA

>NZ_CP014835|1|1|115110-115188|CRISPRCasFinder
AAACAAAATTGAAACGTTTCCAAAA	TATGGGTTCGTACTTATTCTTTTTTAAAA
AAACAAAAATTGAAACGTTTCCAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014835.1\|WP_062707522.1\|110079_110226_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
NZ_CP014835.1\|WP_062707560.1\|126925_127384_+\|DUF3284-domain-containing-protein	unknown	unknown	gnl\|CDD\|378692
NZ_CP014835.1\|WP_062707530.1\|112928_113399_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP014835.1\|WP_157761180.1\|108367_108496_+\|DUF853-family-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP014835.1\|WP_062712287.1\|114084_115056_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_CP014835.1\|WP_062707545.1\|120308_121664_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP014835.1\|WP_062707548.1\|121664_123062_+\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP014835.1\|WP_062707558.1\|126597_126921_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238133
NZ_CP014835.1\|WP_062707525.1\|110270_110507_+\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_CP014835.1\|WP_062712284.1\|106205_107036_+\|DNA-formamidopyrimidine-glycosylase	unknown	unknown	gnl\|CDD\|234899
NZ_CP014835.1\|WP_062707555.1\|126283_126595_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
NZ_CP014835.1\|WP_062707527.1\|110585_112919_+\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NZ_CP014835.1\|WP_062707550.1\|123073_124168_+\|DUF871-domain-containing-protein	unknown	unknown	gnl\|CDD\|377567
NZ_CP014835.1\|WP_062707552.1\|124277_126272_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP014835.1\|WP_062707507.1\|104416_104803_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319937
NZ_CP014835.1\|WP_062707539.1\|117129_118758_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270299
NZ_CP014835.1\|WP_062707541.1\|118767_120138_+\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_CP014835.1\|WP_062707519.1\|108867_110079_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340949
NZ_CP014835.1\|WP_062707516.1\|107020_107635_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP014835.1\|WP_062707536.1\|116126_117014_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP014835.1\|WP_062707522.1\|110079_110226_+\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	2.29499e-17
NZ_CP014835.1\|WP_062707560.1\|126925_127384_+\|DUF3284-domain-containing-protein	gnl\|CDD\|378692	pfam11687, DUF3284, Domain of unknown function (DUF3284). This family of proteins with unknown function appears to be restricted to Firmicutes.	3.17241e-19
NZ_CP014835.1\|WP_062707530.1\|112928_113399_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	8.00792e-87
NZ_CP014835.1\|WP_157761180.1\|108367_108496_+\|DUF853-family-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	7.07466e-08
NZ_CP014835.1\|WP_062712287.1\|114084_115056_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.38361e-98
NZ_CP014835.1\|WP_062707545.1\|120308_121664_+\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP014835.1\|WP_062707548.1\|121664_123062_+\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP014835.1\|WP_062707558.1\|126597_126921_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|238133	cd00215, PTS_IIA_lac, PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	3.96236e-37
NZ_CP014835.1\|WP_062707525.1\|110270_110507_+\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	8.01099e-14
NZ_CP014835.1\|WP_062712284.1\|106205_107036_+\|DNA-formamidopyrimidine-glycosylase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	5.44841e-139
NZ_CP014835.1\|WP_062707555.1\|126283_126595_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.11888e-40
NZ_CP014835.1\|WP_062707527.1\|110585_112919_+\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0
NZ_CP014835.1\|WP_062707550.1\|123073_124168_+\|DUF871-domain-containing-protein	gnl\|CDD\|377567	pfam05913, DUF871, Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.	2.53146e-147
NZ_CP014835.1\|WP_062707552.1\|124277_126272_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	2.12838e-55
NZ_CP014835.1\|WP_062707507.1\|104416_104803_+\|VOC-family-protein	gnl\|CDD\|319937	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins. BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping.	1.08414e-27
NZ_CP014835.1\|WP_062707539.1\|117129_118758_+\|extracellular-solute-binding-protein	gnl\|CDD\|270299	cd13581, PBP2_AlgQ_like_2, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	0
NZ_CP014835.1\|WP_062707541.1\|118767_120138_+\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	5.5165e-150
NZ_CP014835.1\|WP_062707519.1\|108867_110079_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.12104e-168
NZ_CP014835.1\|WP_062707516.1\|107020_107635_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	2.7174e-81
NZ_CP014835.1\|WP_062707536.1\|116126_117014_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.56735e-66

>NZ_CP014835.1|WP_062712287.1|114084_115056_+|LacI-family-DNA-binding-transcriptional-regulator
MKATMKEVAELAGVGVGTVSRVVNGIKVKDSTLKKVEEAIRELNYQPDEYARGLKTNRSNIIALIIPTIWHPFFSEFAYHVEKELTKRRHKLFICNAEEDGQKEFEYLQMLEKNKVDGIIGITYSDIDQYVSSKLPFVSIDRHFSEKIPYVTSDNYGGGKLAAEVLMAKGATRFAYIGGTNQFENETVLRKVGFSETLQKHGLVVKKLDMLEPIDDLHGKIEKFLLANPDIDGIFTVNDFMATNVIKVSQALNRYAPEDYQIIGFDGLKSAVDQNYYVSTIAQPIELMAKESVELLMRVIDNNVEESRIVLPIRFEDGGTTKG
>NZ_CP014835.1|WP_062707530.1|112928_113399_+|SsrA-binding-protein-SmpB
MPKGTDSNVLAQNKKARHDYSIVDTVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNQDPERTRKLLLKKREIDRLANELKGSGMTLVPLKVYLKNGFAKVLIGLAKGKHDYDKRESIKRREQDRDIKRVMKSINQR
>NZ_CP014835.1|WP_062707527.1|110585_112919_+|ribonuclease-R
MKEHIFNYLKEHGKSNINDLAASLDMAGAKKFPLLIKEISKMESQRELRFNDDGMLSLRKPQAKKEQITIQGIFRANKAGFGFLFVDDNEDDMFIGRNDVGHAIDGDTVEVVVKKPADRLKGTAAEARVVKIVDHALKTVVGQFILDDEKPKYAGYIKSKNQKIQQKIYIKKEPVLLDGTEIIKVDIDKYPIRGHDYFVGVVRDIVGHQGDVGIDVLEVLESMDIVSEFPDDVIAEANAVADAPSDKDLVGRVDLRKEITFTIDGADAKDLDDAVHIKRLSNGNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEINPQGKVVDYQICQSVINTTYRMTYSDVNEMIASNQEILKEYEAIADSVHDMAALHKILEDMRVRRGALNFDTSEAKIIVNDKGMPVDIVVRSRGIAERMIESFMLAANECVAEHFSKNDLPFIYRIHEEPKAEKLQKFIDYASVFGVQIRGTASKITQSALQDFMAKMEGQPGSEVLNMMLLRSMQQARYSEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRMIREYSQGATPEKQEHFATVVPELATSSSQLERRAIDAERIVEAMKKAEYMEEHVGEEFDGVVASVVKFGLFVELPNTIEGLIHVTTLPEFYHYNERSMSLKGEKSGKVFKVGQPIRIKLTRADKETGDIDFEYLPSDYDVIEKVDKSDRKEGRRGRHFENGRGKSHDNSKTGGKRRQSSKGKTDKKPFYKKVAKQSQTSKKRK
>NZ_CP014835.1|WP_062707525.1|110270_110507_+|preprotein-translocase-subunit-SecG
MYNLLLTALLVISVVLVIAIFMQPQKNPGSNVFDSGGSEALFERSKARGFEAFMQRFTGILVFFWLLIAFLLVLLSSR
>NZ_CP014835.1|WP_062707522.1|110079_110226_+|50S-ribosomal-protein-L33
MRVKIHLKCSECGSKNYLTSKNKVTHPEKIQVPKYCPKERKVTLHLES
>NZ_CP014835.1|WP_062707519.1|108867_110079_+|multidrug-efflux-MFS-transporter
MIRIPIEVDWKKNLKIAWFGSFLAGASFSLVMPFMPLYVEQLGAKPGLVELYSGLAVSLSALASGLFAPMWGRLADRYGRKPMMIRASFVMTLTMGGLAFVPNVFWLLVLRVLNGMFAGFIPNSNALIASQAPQEKTGYALGTLATGVIGGSLIGPLFGGFLAELVGIKMVFLLVGFLLFTVCLMTIFMIEEDFKPVARIDAWSTKELFDRIKDKQMLVGLFVTSMIIQIAAQSVAPILTLYIRHLGQTENLMFVSGAIVSAMGFSSMISSSRLGKAGDKIGNHRLILMGLLYCSVIYLFLARSETSLELGIWRFLFGFGTGALMPSVNSLLTHLTPKQGISRIFAYNQMFTNFGQVIGPFVGSAVAAGMGYRSVFYVTSAIVFFNFIWSLVNFRKYLTKKEI
>NZ_CP014835.1|WP_157761180.1|108367_108496_+|DUF853-family-protein
MLLLTMLNCYGIITGAIGISNTVSLTVLAESLRFAAVPAFFE
>NZ_CP014835.1|WP_062707516.1|107020_107635_+|dephospho-CoA-kinase
MPETMKQVIGITGGIASGKSTVTNYIRQEGFEVIDADAVVHELQTKGGKLYQVLLDFYGSKILAPDGELDRQALSEQFFSDEKVRVEVSALQDTIIRQELLARRDVLLEKYDLVFMDIPLLFELDYQSQLNQVWLVYLDPAQQLQRLMQRNGYTKEQAKQRMAAQLSLEEKKKRSDRVIDNSGPLEDTYAQIDCLLKEVSHVKT
>NZ_CP014835.1|WP_062712284.1|106205_107036_+|DNA-formamidopyrimidine-glycosylase
MPELPEVETVRRGLEKHVVGKSIKAIRFAFPKIAVTGVDSFRPLIDGQMTIHAMRRRGKYLIFDFGDLLLISHLRMEGKYLIFDRQEKVPENKHFHVFVTFADDSVLVYQDVRKFGTMEILLPSQEATYFAFKKLGPEPTRETFKLAPFERSLKSSSKKIKPYLLDQSLVAGLGNIYVDEVLWAAKVHPLRLSSSLKKTEIKRLHDETIRILQLGIEKGGSTIRTYRNALGEDGTMQRYLQVYGLTGQPCQRCGTAIEKMQVGGRGSHYCPKCQRQ
>NZ_CP014835.1|WP_062707507.1|104416_104803_+|VOC-family-protein
MEYSTLIPELIVSDIEKTYVFYVDLLGFQVEYERPEDKFYFLSYGDAQLMIEEASEEELSQLIYPFGYGLNFSLGVDDVSATYQAFQTAGYPIRRELEVREFRVGDDVVRPKEFAVLDPDGYYWRISD
>NZ_CP014835.1|WP_062707536.1|116126_117014_+|carbohydrate-ABC-transporter-permease
MNTRMLTNFDKRVLVMNRVLIALLVLITVVPMGYILIASFMDPQVLVNQGISFNPKDWTVEGYQRVFSDDSILRGFINSLLYSTIFAALTVVISVMTAYPLSKKDLIGRRWVNYFLIFTMFFGGGLVPTYLLVKNLGMLNSMWAIVLPGAVNVWNIILARTYFQSLPDELIEAAVIDGANEFQIFLKVILPLAKPIMFVLFLYAFVGQWNSYFDAMIYIKDPDKAPLQLVLRNILIQNEVNANMIGAQAAINELKRIAEIVKYATIVISSLPLIVLYPFFQKYFDKGIMAGSLKG
>NZ_CP014835.1|WP_062707539.1|117129_118758_+|extracellular-solute-binding-protein
MKTMNLNKWFKISALLTTSAVLLAACGNSSSETASKDYGLKDIKFPLKDKVTLKFMTTSSTLAPKDPNKKLIFKRLEQETGVHIDWTNYQSDFAEKRNLDISSGDVPDAIHNDGASDVELMKWAEQGVIVPVEDLIDEHMPNLKKILDENPQYRALITAPDGHIYSFPWIEELGEGKESIHSVNDMAWINKKWLDELGLDMPKTTDELVKVLEAFKTKDPNRNGKADEIPLSFINSAGNEDFKVLFGSFGTGDNDEHVVVGNDGKVDFTADNDDYKEGIKFMRSLYEKGLIDSEAFEQDWNTYTSKGNDQKYGVYFTWDKNNVTGSNEDYQVLPVLEGPDGEKNVTRTNNVGFQRDRMVITSVNKNLELTAKWIDAQYEPIQSVQNNWGTYGDTKQQNIFEFNKETNSLKHLPLDGTAPTELRQKTEVGGPLAILDSYYGDVTTMPDDAKWRLDLLQANYVPYMKNDEIYPKVFMEEKDLDKIAQVEADMMDYVTRKRSEWITNGGIDDEWDSYLKELEKYGLKDYMKLKQKYYDEFKKNQE
>NZ_CP014835.1|WP_062707541.1|118767_120138_+|glycoside-hydrolase-family-32-protein
MLNDYTTTRANHYILEHKKEINHQFKPVNHFSAEMGWINDPNGFVYFRGEYHLFYQFYPYDSVWGPMHWGHAKTSDFVHWEHLPVALAPDMSYDKDGCFSGSAIVKDDVLWLMYTGNIEQEDGSIRQVQNMAYSKDGIVFTKIAENPVATGECLPKELISSDFRDPKLFEKDGKYYAVVAAKHQDDVGTIVLLGSDNLIDWTFESIFLKGTPEQGIMWECPDYFNLEGTDVLVMSPMRVARDKYHFRNINASVVLTGKVDWDEKRFKLESIHELDHGHDFYAPQSLLDDKGRRIMIAWLHTWGRQLPPHELQHRWAGSMTLPRELTLKDTRVLQNILPETLEALPMIEMNQNLTKTGFFEIEVNGRLQMRLGTLDDYISFGFDEEEGVVFIDRKHLKYKLKGDETWQTDLRSIPIQAKKLVVVIDYNSIEIFVNDGEETLSSAYYIEGDCYLSRIV
>NZ_CP014835.1|WP_062707545.1|120308_121664_+|6-phospho-beta-glucosidase
MMASIKLVTIGGGSSYTPELVEGMILRSHLISISEWWFVDVPEGEEKLHIVVELAKRMVEKAGLDWKIKATLNRQEALKDADFVTSQFRVGGLDARYLDESIPLSRGIIGQETNGAGGLFKAFRTVEAYKSIVSDMKTFCPDAWLINFTNPAGMVTEALINRLGWKKTIGLCNIPIGQQKAAASALALDESELTLRHVGLNHYHFHQVWDKNGHNRTGELIERFYGRLKAKEQETVKNITNLEFPISFLRSIQMLPCDYHRYYFLEKEMLADALAQYREGHIRAAVVKDVEKELFELYQDPNLKEKPKQLEQRGGAYYSDIACQIIVAIITDSHETLTVSTVNHGVIPFLPKDSVVEVSAMITSQGAIPLATPDVPKVLEGQLQLMKKMEQVTVEAAISGDYHTALQAFFLNPLIPNGSETELLLKELLLAHDTYLPQFQPTIAAIKEGKL
>NZ_CP014835.1|WP_062707548.1|121664_123062_+|glycoside-hydrolase-family-1-protein
MTTTQTYQFPEGFLWGTSTSGPQSEGSIEGDGKGMNNWDYWYSIAPEKFHDGIGPSQTSTFYQHYKEDIGLLKETGQTVFRPSIQWARLIPDGTGKVNGKAVAFYRDVFKSIKDVGVKPIVNLYHFDLPYALQEKGGWENKETVYAYEAYARKCFELFGDLVDTWITFNEPIVPVECGYMNDLHYPCKVDPKAAVAVAYHTQLASSLAVKACHDVNASHKISIVLNLTPAYPRSESEEDRQAAHIAELFQTKSFLDPSVLGTYPDDLVEIIRKHDLMPEVTSEELDIIRQHTVDFLGVNYYQPMRVKAPESHSGLDQAFSLDLYFEHYDMPGKKINPHRGWEIYEQGIYDIAMTIRDHYGNIDWLVTENGMGVEGEEKFLKDGVIQDDYRIAFIKDHLIELHKAIEEGANCKGYMLWTFIDCWSWLNAYKNRYGLVSLDLETQERRLKKSGYWFKELSQNNGFSQ
>NZ_CP014835.1|WP_062707550.1|123073_124168_+|DUF871-domain-containing-protein
MVTFGFSIYPEKHELNKIKSYMDLLKKYGAERIFMSLLQLEAGDTTTFDKYKAIIHYANELNMRVIADISPSFIEQNAWEDQLILKAKEFGLAGLRLDEALSIDDIVSLTQNQLGLKIELNMSTDKTLVNDLLASDANFDNIIACHNFYPHEFTALSQQHFREMSAFYNEKGIETAAFVSSQTAKEGPWPLSEGLPTVEDHRHLPIAQQVQLMKAVGTIDNILISNQFISEEELKTCHQALVSEVKCLEVSVLDDLSSVEEAIVSFDHNYRGDISDYVIRSTIPRTIYTDVSLPPRDNQSKKVKRGSLIIDNDRYTRYKGELQIALKDFTISDKANVVGHICETSLPLLETLEAWEDFKLIIKS
>NZ_CP014835.1|WP_062707552.1|124277_126272_+|BglG-family-transcription-antiterminator
MLSKKEMSLMDFLIKQRSTFVSSEDIGHQLGMSDRTVRKYLSQLSDTIVGHGASIISKRGYGYQLMVDDQPMFELFWQNLLAAKRNVKDVLQIEEAEDRKHYILNKLFFEDKQQSLKSLAKELFISRTTLNNVLSLIRETLLPYGLTLLTNKQMITVLGSEADMRRFIMDYFFVNSFDESMSGMVEHYFVSTINFPELTIFVIDECRNADLKLSDFIIQNLVLHIALMLQRIRLGYPLKSFNSSDVIESSEEYRVAKRILNRVEEAYDISFPKEEANYIALHLTVKNSSVNPATTGFSTGLIEYHLKEKFVEASQLIAVPFYLDNDLLNGLTAHMTPLLSRLKNKIQMTNPLTEQLKQDYPEVFEMTKHVFKDMPELSPYQVTDDEWAYITLHLMAAIERYSNKNKLNVLVVCATGYGSALMLKNRLEKEFGGSLQIVDAISYYELSEKRLQSIDLIISSISLSNLMFLTPVINVSVFLNDEDIARIRSYLSEEISVNYNSRGQRKLSDEKACQIAEEMFVSKRFFYFEQELSKAEVLETMVSSLEESRDDQFVEQFLKQMELRESYSPIVYGNTLAFPHPSSAMSLSEQVVVGVLKEPLQWNEEHCVNFIFLLSPSKGSNPYLKHLSPSLVDFVEQTELQEQLLASPTVNNVKKIFIPLIGKH
>NZ_CP014835.1|WP_062707555.1|126283_126595_+|PTS-sugar-transporter-subunit-IIB
MKSIMLVCNAGMSTSMLVTKMQKAAEDKGVDVKIWAVPVSEAANEVADNAIDVLLLGPQVKFLVKEFKEKYEPEIKVDSINMVDYGTMNGANVLETALKMMED
>NZ_CP014835.1|WP_062707558.1|126597_126921_+|PTS-lactose/cellobiose-transporter-subunit-IIA
MTEPTNLEAIMGLIMYGGEAKGKAVEAIREAKLGNIAQARTRIDDAYNSLNVAHNSQTELLSQEAAGQSVELSLLMVHGQDHLMTALTFIDMAKEVIDVYEKLAELS
>NZ_CP014835.1|WP_062707560.1|126925_127384_+|DUF3284-domain-containing-protein
MEIIKTADVSITALFQVVTDSLKRDYHENTLKKLTDEAIVPGLNYIKTFGSSQQHQIKVVVENFDAPNQYVVSFHSNRGKQTISYHFKALEANKTLIAYAQDLQASDIFQKGNRFLMNTVFKKSIEKQTQAQLDALVMHAKDLDTSEKERQS

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Crispr_ID: NZ_CP014835_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014835_2

1011900-1013914

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	PILER-CR
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CRISPRCasFinder
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CRT

30 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP014835_2

>merge|NZ_CP014835|2|1011900-1013914|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATCCACGCACCCGCGAAGGGTGCGACCTTTAAACCATCTGGCTCTGTATAAACTTTTTTATTTCAATCCACGCACCCGCGAAGGGTGCGACCATAACTCGCAGAAGTATAGCCATCATTTGAATACATTTCAATCCACGCACCCGCGAAGGGTGCGACAGGAGTCCAAGAGCAGTTATGTTTTGCAATCGAAATTTCAATCCACGCACCCGCGAAGGGTGCGACAATCTCATGGGCAATTTAATAAAGGAGGTAAAATATTTCAATCCACGCACCCGCGAAGGGTGCGACTCAGATTGCGCATTATCATACAGGTCGATTAGAATTTCAATCCACGCACCCGCGAAGGGTGCGACTCCAGTTAATTTCCATGTTATTTCCTTTCTTTAATTTCAATCCACGCACCCGCGAAGGGTGCGACAAAACGCAACTCATGACCGTTTATCAAACAGAGATTTCAATCCACGCACCCGCGAAGGGTGCGACTTAGGGAATGATTTACTAGATGGCTCTTCAAAGTAATTTCAATCCACGCACCCGCGAAGGGTGCGACATGGAAACACTAACCTATACCTTAACCGACCGCCTAATTTCAATCCACGCACCCGCGAAGGGTGCGACCTACCACGAAAGAAAATAAAACGCTCAGAGAGCAATTTCAATCCACGCACCCGCGAAGGGTGCGACCCTTTGGAACAGGTATCACATCAGAAGAATCAAAATTTCAATCCACGCACCCGCGAAGGGTGCGACATCATGCTAAATCTAGTCATGCAATATCTAAAAATTTCAATCCACGCACCCGCGAAGGGTGCGACCAAACGTCCGGTTAACATTTATATGACAGCGTGGATTTCAATCCACGCACCCGCGAAGGGTGCGACCAGGACAAAAAATGAAAATAACTGCATTAACAATGATTTCAATCCACGCACCCGCGAAGGGTGCGACGAGTAGAGGTCTTAAATAAATCACTTGTCTTAAATATTTCAATCCACGCACCCGCGAAGGGTGCGACCAGGACAATTTACCGTCAACGATCTTAAACAAGCATTTCAATCCACGCACCCGCGAAGGGTGCGACGGTGTTACAGGCAGCATTCAGACACGTAACTATATTTCAATCCACGCACCCGCGAAGGGTGCGACTTTGGGAAATTGGAGTTCGACTAAAACATGTTAAAATTTCAATCCACGCACCCGCGAAGGGTGCGACGATATGTTATCCCAGCAGGTCATGATTACTACGAATTTCAATCCACGCACCCGCGAAGGGTGCGACTGATAAAAGATAACATAATCAAAAAGCAAACCTTATTTCAATCCACGCACCCGCGAAGGGTGCGACGGATTAGGCGTGATATTGAGGTAGATACCGACAAAATTTCAATCCACGCACCCGCGAAGGGTGCGACAACAACGATAAGCTCTGGGCGAAACTACTCAAAATTTCAATCCACGCACCCGCGAAGGGTGCGACGTTAATAAAGCTTTTATGTTGCATACCATAAAGATTTCAATCCACGCACCCGCGAAGGGTGCGACCTTTATTTTCCTTTCTGTCTTCATCCTCCCTAGTTATTTCAATCCACGCACCCGCGAAGGGTGCGACAGACGCACATACGCTTGTAAGTGGGGATTGCCTTATTTCAATCCACGCACCCGCGAAGGGTGCGACGTAATGTTGAGTACTTTGTAAAAATGCTAAAAAATATTTCAATCCACGCACCCGCGAAGGGTGCGACAGGTTTATATGGCGGTACTACTGCCGTAGGATATTTCAATCCACGCACCCGCGAAGGGTGCGACCGGTTGCTTTGGTTACTTGATAGCTTTCCACCAGAAATTTCAATCCACGCACCCGCGAAGGGTGCGACGCTGGTTTTTAGGAAAATTGAAAGTTAATAAGATCATTTCAATCCACGCACCCGCGAAGGGTGCGACTGGAGCACCTGAATATCAGTCTAATGATGATGTTATTTCAATCCACGCACCCGCGAAGGGTGCGAC

>NZ_CP014835|2|1|1011900-1013914|PILER-CR
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTAAACCATCTGGCTCTGTATAAACTTTTTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CATAACTCGCAGAAGTATAGCCATCATTTGAATAC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGAGTCCAAGAGCAGTTATGTTTTGCAATCGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AATCTCATGGGCAATTTAATAAAGGAGGTAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCAGATTGCGCATTATCATACAGGTCGATTAGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCCAGTTAATTTCCATGTTATTTCCTTTCTTTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AAAACGCAACTCATGACCGTTTATCAAACAGAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTAGGGAATGATTTACTAGATGGCTCTTCAAAGTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATGGAAACACTAACCTATACCTTAACCGACCGCCTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTACCACGAAAGAAAATAAAACGCTCAGAGAGCA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CCTTTGGAACAGGTATCACATCAGAAGAATCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATCATGCTAAATCTAGTCATGCAATATCTAAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAAACGTCCGGTTAACATTTATATGACAGCGTGG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAAAAAATGAAAATAACTGCATTAACAATG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GAGTAGAGGTCTTAAATAAATCACTTGTCTTAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAATTTACCGTCAACGATCTTAAACAAGC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGTGTTACAGGCAGCATTCAGACACGTAACTAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTTGGGAAATTGGAGTTCGACTAAAACATGTTAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GATATGTTATCCCAGCAGGTCATGATTACTACGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGATAAAAGATAACATAATCAAAAAGCAAACCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGATTAGGCGTGATATTGAGGTAGATACCGACAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AACAACGATAAGCTCTGGGCGAAACTACTCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTTAATAAAGCTTTTATGTTGCATACCATAAAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTATTTTCCTTTCTGTCTTCATCCTCCCTAGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGACGCACATACGCTTGTAAGTGGGGATTGCCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTAATGTTGAGTACTTTGTAAAAATGCTAAAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGTTTATATGGCGGTACTACTGCCGTAGGAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CGGTTGCTTTGGTTACTTGATAGCTTTCCACCAGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GCTGGTTTTTAGGAAAATTGAAAGTTAATAAGATC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGGAGCACCTGAATATCAGTCTAATGATGATGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC

>NZ_CP014835|2|2|1011900-1013914|CRISPRCasFinder
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTAAACCATCTGGCTCTGTATAAACTTTTTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CATAACTCGCAGAAGTATAGCCATCATTTGAATAC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGAGTCCAAGAGCAGTTATGTTTTGCAATCGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AATCTCATGGGCAATTTAATAAAGGAGGTAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCAGATTGCGCATTATCATACAGGTCGATTAGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCCAGTTAATTTCCATGTTATTTCCTTTCTTTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AAAACGCAACTCATGACCGTTTATCAAACAGAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTAGGGAATGATTTACTAGATGGCTCTTCAAAGTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATGGAAACACTAACCTATACCTTAACCGACCGCCTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTACCACGAAAGAAAATAAAACGCTCAGAGAGCA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CCTTTGGAACAGGTATCACATCAGAAGAATCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATCATGCTAAATCTAGTCATGCAATATCTAAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAAACGTCCGGTTAACATTTATATGACAGCGTGG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAAAAAATGAAAATAACTGCATTAACAATG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GAGTAGAGGTCTTAAATAAATCACTTGTCTTAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAATTTACCGTCAACGATCTTAAACAAGC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGTGTTACAGGCAGCATTCAGACACGTAACTAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTTGGGAAATTGGAGTTCGACTAAAACATGTTAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GATATGTTATCCCAGCAGGTCATGATTACTACGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGATAAAAGATAACATAATCAAAAAGCAAACCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGATTAGGCGTGATATTGAGGTAGATACCGACAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AACAACGATAAGCTCTGGGCGAAACTACTCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTTAATAAAGCTTTTATGTTGCATACCATAAAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTATTTTCCTTTCTGTCTTCATCCTCCCTAGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGACGCACATACGCTTGTAAGTGGGGATTGCCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTAATGTTGAGTACTTTGTAAAAATGCTAAAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGTTTATATGGCGGTACTACTGCCGTAGGAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CGGTTGCTTTGGTTACTTGATAGCTTTCCACCAGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GCTGGTTTTTAGGAAAATTGAAAGTTAATAAGATC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGGAGCACCTGAATATCAGTCTAATGATGATGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC

>NZ_CP014835|2|1|1011900-1013914|CRT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTAAACCATCTGGCTCTGTATAAACTTTTTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CATAACTCGCAGAAGTATAGCCATCATTTGAATAC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGAGTCCAAGAGCAGTTATGTTTTGCAATCGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AATCTCATGGGCAATTTAATAAAGGAGGTAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCAGATTGCGCATTATCATACAGGTCGATTAGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TCCAGTTAATTTCCATGTTATTTCCTTTCTTTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AAAACGCAACTCATGACCGTTTATCAAACAGAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTAGGGAATGATTTACTAGATGGCTCTTCAAAGTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATGGAAACACTAACCTATACCTTAACCGACCGCCTA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTACCACGAAAGAAAATAAAACGCTCAGAGAGCA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CCTTTGGAACAGGTATCACATCAGAAGAATCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	ATCATGCTAAATCTAGTCATGCAATATCTAAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAAACGTCCGGTTAACATTTATATGACAGCGTGG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAAAAAATGAAAATAACTGCATTAACAATG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GAGTAGAGGTCTTAAATAAATCACTTGTCTTAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CAGGACAATTTACCGTCAACGATCTTAAACAAGC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGTGTTACAGGCAGCATTCAGACACGTAACTAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TTTGGGAAATTGGAGTTCGACTAAAACATGTTAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GATATGTTATCCCAGCAGGTCATGATTACTACGA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGATAAAAGATAACATAATCAAAAAGCAAACCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GGATTAGGCGTGATATTGAGGTAGATACCGACAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AACAACGATAAGCTCTGGGCGAAACTACTCAAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTTAATAAAGCTTTTATGTTGCATACCATAAAG
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CTTTATTTTCCTTTCTGTCTTCATCCTCCCTAGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGACGCACATACGCTTGTAAGTGGGGATTGCCTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GTAATGTTGAGTACTTTGTAAAAATGCTAAAAAAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	AGGTTTATATGGCGGTACTACTGCCGTAGGAT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	CGGTTGCTTTGGTTACTTGATAGCTTTCCACCAGAA
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	GCTGGTTTTTAGGAAAATTGAAAGTTAATAAGATC
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC	TGGAGCACCTGAATATCAGTCTAATGATGATGTT
ATTTCAATCCACGCACCCGCGAAGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014835.1\|WP_062709572.1\|1010861_1011221_-\|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP014835.1\|WP_062709575.1\|1011220_1011697_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP014835.1\|WP_062709560.1\|1006068_1006860_-\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_CP014835.1\|WP_062709545.1\|1001399_1002344_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238558
NZ_CP014835.1\|WP_062709578.1\|1014061_1014355_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP014835.1\|WP_062709557.1\|1004990_1005926_-\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_CP014835.1\|WP_157761194.1\|1023272_1023458_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014835.1\|WP_062709583.1\|1015386_1016058_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
NZ_CP014835.1\|WP_062709594.1\|1020347_1022744_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP014835.1\|WP_062709554.1\|1003374_1004382_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP014835.1\|WP_062709586.1\|1016059_1016908_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP014835.1\|WP_062709563.1\|1007561_1008893_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP014835.1\|WP_062709580.1\|1014364_1015390_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP014835.1\|WP_062709569.1\|1009040_1009670_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP014835.1\|WP_062709592.1\|1018803_1019541_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP014835.1\|WP_062709542.1\|1000602_1001403_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP014835.1\|WP_062709600.1\|1023463_1023925_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP014835.1\|WP_172793783.1\|1023991_1026808_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223039
NZ_CP014835.1\|WP_099091461.1\|1002361_1003378_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP014835.1\|WP_062709589.1\|1016911_1018804_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839

Protein	Function_ID	Function_description	E-value
NZ_CP014835.1\|WP_062709572.1\|1010861_1011221_-\|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	6.12532e-50
NZ_CP014835.1\|WP_062709575.1\|1011220_1011697_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.37369e-52
NZ_CP014835.1\|WP_062709560.1\|1006068_1006860_-\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	6.424e-118
NZ_CP014835.1\|WP_062709545.1\|1001399_1002344_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	6.34807e-58
NZ_CP014835.1\|WP_062709578.1\|1014061_1014355_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.03429e-32
NZ_CP014835.1\|WP_062709557.1\|1004990_1005926_-\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	4.68788e-176
NZ_CP014835.1\|WP_062709583.1\|1015386_1016058_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	5.10635e-32
NZ_CP014835.1\|WP_062709594.1\|1020347_1022744_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.87582e-80
NZ_CP014835.1\|WP_062709554.1\|1003374_1004382_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	2.2891e-77
NZ_CP014835.1\|WP_062709586.1\|1016059_1016908_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	8.28245e-139
NZ_CP014835.1\|WP_062709563.1\|1007561_1008893_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	7.04693e-130
NZ_CP014835.1\|WP_062709580.1\|1014364_1015390_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP014835.1\|WP_062709569.1\|1009040_1009670_-\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	2.49679e-102
NZ_CP014835.1\|WP_062709592.1\|1018803_1019541_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.53516e-94
NZ_CP014835.1\|WP_062709542.1\|1000602_1001403_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	3.4294e-123
NZ_CP014835.1\|WP_062709600.1\|1023463_1023925_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	4.61938e-41
NZ_CP014835.1\|WP_172793783.1\|1023991_1026808_-\|hypothetical-protein	gnl\|CDD\|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	5.57488e-08
NZ_CP014835.1\|WP_099091461.1\|1002361_1003378_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.64594e-76
NZ_CP014835.1\|WP_062709589.1\|1016911_1018804_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	8.98346e-111

>NZ_CP014835.1|WP_062709575.1|1011220_1011697_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MIFRTFYQSPLGQISLLADEESLLGLYFVGQAYYERGFESFQLLNQEVTPHQEAKLWLDAYFAGRQPDPSQLRLAPHGTAFQHRVWSALAAIPYGQTTTYGKLATELNCKSAQAIGSAVGKNPLSIIVPCHRVLGADGSLTGYAGGLERKAMLLELEK
>NZ_CP014835.1|WP_062709572.1|1010861_1011221_-|Spx/MgsR-family-RNA-polymerase-binding-regulatory-protein
MYTFYEYPKCTTCKKAKKELDMLGVNYEAVDIKTNPPQVSLLQELLEHSDLDLKKFFNTSGNSYRQLGLKDKFDSLTVDKALELLSKDGMLIKRPILIKDDRVLQIGYRTPYAALQLSE
>NZ_CP014835.1|WP_062709569.1|1009040_1009670_-|endonuclease-III
MVLSKKRARKVIEEIIALFPDAKPSLNFRNSFELLVAVTLSAQTTDAAVNKVTPALFEAFPTPADMALATEEEIAEYISRLGLYRNKAKFLKKCSQQLLEEFDGEVPRTRSELESLAGVGRKTANVVMSVGFGIPAFAVDTHVTRICKHHDIVKKSATPLDIEKRVMEVLPEEEWLPAHQAMIYFGRAICHPKNPKCHEYPQLYDFSDS
>NZ_CP014835.1|WP_062709563.1|1007561_1008893_-|HlyC/CorC-family-transporter
MEDPGQSLILQFILLLILTLLNAFFSASEMALVSLNRSRVDQKAEEGDKKFIRLVKVLENPNNFLSTIQVGITLINLLAGANFADSLGEVIAGWFGDSRLANTIGSAASLIFLTYISIVFGELYPKRIAMNLKENLAVVSAPVVLVLSKIVSPFVWLLSASTNLLSRITPMNFDDADEQMTRDEIEYILTNSEASLDADEIGMLQGIFSLDEMMAREVMVPRTDAFMVDINDDIKEIVQAILQENYSRIPVYDGDKDKVIGLIHTKKILNDAFANGFDNINIRRIMQEPLFVPETIFVDDLLTQLRATQNQMAILLDEYGGLAGIATLEDLLEEIVGEIDDETDLAAESVREIAENTYIVQGTMTLNEFNGYFDTNLESDDVDTIAGFYLTGVGSIPSQEVKESYIVDSNDKQLTLINDKVKDGRINKLKLLVSEIPEEEEED
>NZ_CP014835.1|WP_062709560.1|1006068_1006860_-|pyruvate-formate-lyase-activating-protein
MTETDYSQVTGMVHSTESFGSVDGPGIRFIVFMQGCKMRCQYCHNPDTWQMETNNSQERTVQDVLNEAMKYRHFWGKNGGITVSGGEALLQIEFVTALFHEAKKYGIHCTLDTCALPFRDKPAYHEIFDKLLEVTDLVLLDIKAIRPEKHKLVTGQSNRNILACARYLSDKGKPVWIRHVLVPGLTDMDEELEELGQFVKTLSNVDKFEVLPYHTMGEFKWRELGIPYKLEGVKPPTPARVQNAKDIMQTESYTEYMKRMQGA
>NZ_CP014835.1|WP_062709557.1|1004990_1005926_-|manganese-dependent-inorganic-pyrophosphatase
MSKFLVFGHQNPDTDAIASSYGWAYLERTAFGRDAEAVALGTPNEETAFALNYFGVDALRVVESAKAEGVSQVILTDHNEFQQSISDIHDVEVAAVIDHHRVANFETANPLYMRVEPVGSASSIVYRAAKENKVELPKEVAGLLLSGLISDTLLLKSPTTHESDPQVAKELAELAGINLEEYGLELLKAGTNLSSKSAAELIDIDAKTFELNGNSVRVAQVNTVDIQDVLERQEEIEAAIADAIVSEAYSDFVLMITDILNSNSEILALGSNMDKVEAAFNFKLDNNHAFLEGAVSRKKQVVPQLTESFNA
>NZ_CP014835.1|WP_062709554.1|1003374_1004382_+|iron-ABC-transporter-permease
MIAQKKRTKPTFLTLVFLLVTCFFLALSIGYANASIMDLVDVLTGQASRGMALIITQIRLPRIMACLLGGGSLALSGLLLQNLTKNPLADSGILGINAGAGLMVALVIGYSDLSDISTTALTPFLAMFGGAATIVLVYWISRKKNHGVNPTRLIIAGIGMSSLLSGLMVTIVSGIDDFKVDFIVSWLSGSISGASWPRILGFAPALLLLWVITYTRSQSLNIMNLNEQTALTLGLDLHKERVVVLFLSTALASLSVVLIGNITFIGLVAGHITRQLLGGDHHLTIPSSIILGMILLLVADTIGRVLLVGTGVPTGIIVTLIGAPYFLYLMTRVKL
>NZ_CP014835.1|WP_099091461.1|1002361_1003378_+|iron-ABC-transporter-permease
MSPLMTHQNRPRLLWLVFFILTIFLLVGIYFGLRFGAVHFSHKEVLTALQHPLTNSNIQDIVIDIRLPRILAAIFVGAAMAQAGALMQGITRNAIADPGLLGTNAGAGLALIMAYAFIGNLHYLQILLICLLGSSLATLMVFILSYQKGKGYHQVRLILAGAMISTLFSAIGQAITIYFNLETTIIGWQAGGLAQINWSMISMIIPIIILGLALAQLFSHQLTILSLNETVAKALGQETFLMTLFLLIIVLVISSGAVAMVGSIAFIGLIIPHFIKLFVPKDYRLILPLSAYAGAVFLLWVDIASRMIHPPTETPISAIIAVVGLPCFLWLIRKGKYL
>NZ_CP014835.1|WP_062709545.1|1001399_1002344_+|ABC-transporter-substrate-binding-protein
MKGRKLLTLIFLITTCFLLVACSSSKKEASKSEEVNISSMPKIKGFTYYGDVPENPKKVVNLAYSYTGYLLKLGVNVSSYSLDLEKNSTAFGDKLKGLPRLTSADIEAIAAQEPDLIIVFSLDENIDKLKKIAPVLAIEFGASDYLQVMDQLGQVFGKEKEAKAWRQDWDKKVSQTKKELAHQLNPATTFTVMDFYDKNIYLYGPEFGRGSELIYRALGYKAPQKVQEDVFKKGWFGVSQEVLGDYIGDYAVVNTNKDNQKAASSLKESDVWKNIPAVKEKHVLTVDYNLFYFADPMSLELQLDAFATAVKKAN
>NZ_CP014835.1|WP_062709542.1|1000602_1001403_+|ABC-transporter-ATP-binding-protein
MSEIQAHNIDVAYDHTTIIENLSVSLPKRAITTIIGANGCGKSTLLKALTRIHSVKKGHIYLDGQSIAKMPTKEVAKKIALLPQVLEATEGITVYELVSYGRFPHQRYLGTLTAHDRSRIHWAMEMTKVTELANLEVDSLSGGQRQRVWIAMALAQDTDTIFLDEPTTYLDLNHQLEVLELLERLNKDSDKTIIMVLHDLNLSARFSDHIIAMKKGSIRYQGPVKEVITPERIEDIFHIKAHIIDDPVSKRPILLSYQLLSPSEDL
>NZ_CP014835.1|WP_062709578.1|1014061_1014355_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTNTAAGRRRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKETLLDIIDMETDSIRFYLLGKNWQNRIETIGRDNSYDPDVGVLLL
>NZ_CP014835.1|WP_062709580.1|1014364_1015390_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYLTRERDNIVIKKDGKVVQRFPYRIIEGIVCFSYLGASPSLIKLCAEHHINLSFHNPQGQFCGRFVGPTNGNVLLRREHYRLADDEESLTYAKRFILAKVSNSRKYLLRFKRDHKDRIDRQLFGEVNTELVWALEQIQAAPDKETLLGIEGQAANQYFRLFNDFILTNKETFSFKIRSRRPPLDCVNALLSFGYSMLTYECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRAYIVDRFVFSLINRSQLSKKDFEIKENGSVLLTDRGRATFIEAWQKRKHTEVVHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFLV
>NZ_CP014835.1|WP_062709583.1|1015386_1016058_-|CRISPR-associated-protein-Cas4
MVYSEEDYLMLSGIQHFQFCKRQWGLIHIDQQWEDNEATAHGQVLHKKADNPYIKEKRKDVIISRAMHVSSSKLGLYGILDVVEFYKDAAGVELKGRRGKWRPTIVEYKRGQPRKDTRDIVQLVAQTICLEETLNCRIDVGYLYYHKVNQKERIDITPTLRQAVFDLAKEMHAYYEGKHVTKAEYFKNCQLCSLVHICLPRLSKKGRNVDNYIAQALKDEDSL
>NZ_CP014835.1|WP_062709586.1|1016059_1016908_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLENKIDFMVTLEVREANANGDPLSGNMPRTDAKGYGLMSDVAIKRKIRNRMQDMGHSIFVQANDRIEDEFKSLEKRFSQHFTTKTPNDEIEEKANQMWLDVRSFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMESKNNSGRSSDTMGTKHFVDYGIYVVRGSINAYFAEKTGFRQEDAEVLKEALISLFENDASSARPEGSMRVREVFWFTHASKLGNVSSGRVFDLLEFDKVNPDKNSYEDYDIMLNQEKLEEYKAKGLTVDILEGL
>NZ_CP014835.1|WP_062709589.1|1016911_1018804_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYENAETESWVDNASKGTILLPIYHTSLKSNGKNIISVVLDNEGKFIKADYIGKEETIIFPVTSNSVARSGKNPASHPLVDKLSYYVSEINQDQYDAYHNQLENWRAACRDEQVKDYLSLIQRFILQPEFLSQICQSLYGQSYTREGLKVTSVGTDNKEKTVDLSTCFLEFKIDHFIGNRTVSVTNYQALHQAFIAYVESHHDDKIICNISGRKETLATKHRGLIGNAKLISVSNNNETYKGRFRERDDVFTVGTQTSEKIHLMAKYLLENDQTHVWLGGTQQMINWFSDDIANDSQLDVTKSVESDVFNWDNMLPDVYETETPVFSIDKTNREINQSFIHGKKTFSDASTYYAAILNKTNDGRIALKYFRHLQVSELLQHLERWQHNYSWESRKQGNNFVIKTPSLNDMILAAYGTDRERYLELDNDSFRSDQYQQLVTALLDGHSVPIHLVKKLESNLKHRQRYPRHWYQIQQVALAILHKQNGEEFTPMLDHKYSNRSYLFGRLLAIYELIETQRYALEGNQDRITNAERYWTAYTGQPAKMMTLLENKVKPYEEVLKLNRPGLWKKLDKERAEVIELLTPAFSAKEFTDALDYKFIFGYYAEKKYYYTSKANMGSEE
>NZ_CP014835.1|WP_062709592.1|1018803_1019541_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRNFYMRVRGDLALFTNPATKGGGERSSYLIPTRQALQGVVDAVYYKPTIVNVVTEVKVINQIQTELHGVRALLADYGADLSYVSYLSDVEYLIKFHFTWNSNRSDLEQDRLPKKHEAIMSRSLKKGGRRDVFLGTRECYGRVDEISQEEYDAAISSYQGQTIDFGIMFHSFAYPTDKKTPLRSYFTQTVMENGIVHFKEQEDCEIMNTLSSYAFKTPGQVKSVDEEYDSYLADEAKEKGGH
>NZ_CP014835.1|WP_062709594.1|1020347_1022744_-|CRISPR-associated-helicase/endonuclease-Cas3
MWAHYNQEMNQKQTLKEHSFNVAVDARQSASSIGQGDILFLLGLYHDLGKSDPLFQTKLCQKPNLQVDHSYAGAKYLYGMMVQSFPKEAFADKKRCFFRDIVTYVIAAHHGMYDIPFDDGQSAQSFRYNKTFQRIMQTRENYAFNPDVLQYAEELETSLSDYGYPYLRDLLEQAWNNFQLLWEKLSPRDKSEEAFYAGCIVRLYLSLLKNADILDTINAYDFILEPPSLTKKRKLIQGYQQSVEDLYASFGQPKTPLNRIRTAIADRVKARGATDTTGVYRLNLPTGAGKTNLSLRYATQQMTKQGKQRFFYITPFLSVLEQNASAIKGVIGEEGVLEHHSNVVKESTAKEEQGDEKAALLADYLLDSWDSPVVLTSMVQFFQTLVKTKSSNIRRFSSLIDSIIILDEVQSLPIEVTTLFNLTLNFLSQVMNATIVLCTATQPTYGSDEVKHRLSYANEADIVTLSAEELEGFTRTELWKFDDTDGKTSLTDVADFVLSEDKSSLIILNTKKSVDNLYRILENQVDRPLYQLSTNMCPQHRLDLIKKIKELLKEGVPVICVSTQLIEAGVDVDFEQVVRSYAGIDSIVQASGRCNREGKRHKGRVTLVNLTENEESLSRLKEIKHKKDVTEAIMKQYHSPIDLVSLNDCFFETYYADHKNDMDYPIGDNETGYDYLSCNTFSGGKTQAMLCQSFKTAGHKINLIKDDSVSVLVSYGKAKETIPVLEDILSSTDYPTNEEWFRIKQLLKELQTYTVNLRNGDELLAATKSYLDGEVLILQEEYYDEVIGVKKEAASFIF
>NZ_CP014835.1|WP_157761194.1|1023272_1023458_-|hypothetical-protein
MSSIQIIALILLAFSIIKAIALVKVFNIFKPDPNAKVEEVPSKTEEERCQEEDELEDDSLF
>NZ_CP014835.1|WP_062709600.1|1023463_1023925_-|transcriptional-repressor
MIDLTEELEAEYQAVLAHFRKKHSRITESRKAILAYMIAANHHPSAEQIYKDLSLRYPNLSLATVYNNLHVLVDEGFVSEIKVTNDQTTYFDYKGHDHINVICEICGKISDLEIELPEIAREAAFQTGYEITKSQFMIYGICGNCQKEQAERL
>NZ_CP014835.1|WP_172793783.1|1023991_1026808_-|hypothetical-protein
MAALSAGMVSGQGYADELTGSDESVVSVMSETAIPNNSEERRLENDTNQDASKMVENTIESTADEKIWSDDKSSLADQTLSEHTAETSNASDLVSESSTQDTKTITDKEVSQFDLWDAVGFDQKAASDPTKIALANFPISTTRSDIPLLISPNVKAIVLEFSGASYYSETDGTLVEKDNRHDLLITYDEVTDTWRGQPYVHQSQMGNSTFVVKSIQRENGSIALYVPVTKEQISVFQKGLYTVTATYSEKLYATVSDWIINTAPTIGIATKTVTAKVDEVVDLLSAVTIFDKEDDFSNSDSYTTRLETLSYENLSTGEITSLEGGTTSVQFRNPGDYRVRISVNDSDGQSAQNEYGLTILPPLLSDNLPDLSEDENLKDAGDAEDPQSPQDPDDGSEFSTPSDDGLIDGDPPVSPEHPDTLSDDKDEIDLPIDEAEVEDSQSPQDPIDQPEDLSPRDDGLIDGDPPRSPELPSTLPDNVPEHPITTDDVEDPQSPQDPNDGSEFSTPSDDGLIDGDPPVSPSHPDTSLDDKTDLPIDEAEVEDSQSPQDPIDQPEDPSPRDDALIDGDPPRSPELPSTLPDNDPEYPITTDDVEDSQSPQDPNDGSEVSTPRDDGFVTNESPISPSHPDTSLDDKDDKTDLPIDEAEVEDPQSPQDPNDGSEVSTPSDDALIDSDPPVSPELPSTLPDNDPEYPITTDEVEDSQSPQDPNDGSEASSSSDGLIDGDPPVLPELPSTLAENDSVNNSDDFDSGEGFIPASYLHLDAVADSDDADETDSRSEEEMEAIESPALEEKTSMIIPVGLSISEDNSSQRQGRWFYVTSVPVVSTSNNLDVSVKIAQKVLERFSGSVYSSEEGNDASFDQSELETMTNDKSQHSAEARKTTMRDDSDIGLFDGTVDNLFSIKKKDDLGSLLVHLLMVIMIIAYSLVGFYFLRKDH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014835_2	2.6\|1012261\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012261-1012293	33	MK448716	Streptococcus phage Javan249, complete genome	38873-38905	1	0.97
NZ_CP014835_2	2.1\|1011932\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1011932-1011964	33	MT900488	Streptococcus phage SA01, complete genome	2311-2343	3	0.909
NZ_CP014835_1	1.1\|115135\|29\|NZ_CP014835\|CRISPRCasFinder	115135-115163	29	NZ_CP026273	Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence	34017-34045	5	0.828
NZ_CP014835_2	2.1\|1011932\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1011932-1011964	33	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	19132-19164	6	0.818
NZ_CP014835_2	2.1\|1011932\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1011932-1011964	33	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	277388-277420	8	0.758
NZ_CP014835_2	2.1\|1011932\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1011932-1011964	33	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	206647-206679	8	0.758
NZ_CP014835_2	2.6\|1012261\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012261-1012293	33	MN693450	Marine virus AFVG_25M486, complete genome	49198-49230	8	0.758
NZ_CP014835_2	2.14\|1012789\|35\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012789-1012823	35	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	141426-141460	8	0.771
NZ_CP014835_2	2.6\|1012261\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012261-1012293	33	MN693220	Marine virus AFVG_25M60, complete genome	56765-56797	9	0.727
NZ_CP014835_2	2.6\|1012261\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012261-1012293	33	JX569801	Campylobacter phage CP30A, complete genome	91945-91977	9	0.727
NZ_CP014835_2	2.30\|1013849\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013849-1013882	34	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	230885-230918	9	0.735
NZ_CP014835_2	2.30\|1013849\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013849-1013882	34	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	3283-3316	9	0.735
NZ_CP014835_2	2.30\|1013849\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013849-1013882	34	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	327993-328026	9	0.735
NZ_CP014835_2	2.1\|1011932\|33\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1011932-1011964	33	MH552526	Siphoviridae sp. isolate ctfj46, complete genome	104621-104653	10	0.697
NZ_CP014835_2	2.10\|1012526\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012526-1012559	34	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	61797-61830	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MK415404	CrAssphage FA1-2_000172F, complete genome	81444-81477	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MK415403	CrAssphage ES_ALL_000190F, complete genome	82138-82171	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MK415410	CrAssphage YS1-2_2437, complete genome	83785-83818	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MW067001	CrAssphage sp. C0521BW15, complete genome	95084-95117	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MW067003	CrAssphage sp. C0531BW4, complete genome	96183-96216	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MK238400	CrAssphage ZA, complete genome	94719-94752	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MW067000	CrAssphage sp. C0521BD4, complete genome	95084-95117	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MK069403	UNVERIFIED: CrAssphage sp. O-152, partial genome	82891-82924	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	BK010471	TPA_asm: Uncultured crAssphage, complete genome	93978-94011	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	NC_024711	Uncultured crAssphage, complete genome	93978-94011	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	JQ995537	Uncultured phage crAssphage, complete genome	93978-94011	10	0.706
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MT006214	CrAssphage LMMB, complete genome	94837-94870	10	0.706
NZ_CP014835_2	2.4\|1012130\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012130-1012163	34	MN061582	Acinetobacter phage vB_AbaP_IME546, partial genome	33467-33500	11	0.676
NZ_CP014835_2	2.4\|1012130\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1012130-1012163	34	MN395291	Acinetobacter phage vB_AbaP_IME546, complete genome	36983-37016	11	0.676
NZ_CP014835_2	2.20\|1013187\|34\|NZ_CP014835\|PILER-CR,CRISPRCasFinder,CRT	1013187-1013220	34	MW067002	CrAssphage sp. C0526BW15, complete genome	96103-96136	11	0.676

1. spacer 2.6|1012261|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK448716 (Streptococcus phage Javan249, complete genome) position: , mismatch: 1, identity: 0.97

tccagttaatttccatgttatttcctttcttta	CRISPR spacer
tccagttaatttccatgttatttcctttctttg	Protospacer
********************************.

2. spacer 2.1|1011932|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MT900488 (Streptococcus phage SA01, complete genome) position: , mismatch: 3, identity: 0.909

ctttaaaccatctggctctgtataaactttttt	CRISPR spacer
tcttaaaccatcgggctctgtataaactttttt	Protospacer
..********** ********************

3. spacer 1.1|115135|29|NZ_CP014835|CRISPRCasFinder matches to NZ_CP026273 (Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence) position: , mismatch: 5, identity: 0.828

tatgggttcgtacttattcttttttaaaa	CRISPR spacer
taactgctcgtacttactcttttttaaaa	Protospacer
**   *.*********.************

4. spacer 2.1|1011932|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 6, identity: 0.818

---ctttaaaccatctggctctgtataaactttttt	CRISPR spacer
agattttaa---atctggctctggatatactttttt	Protospacer
   .*****   *********** *** ********

5. spacer 2.1|1011932|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ctttaaaccatctggctctgtataaactttttt	CRISPR spacer
ttttttcaaatctggctctggatatactttttt	Protospacer
.***     *********** *** ********

6. spacer 2.1|1011932|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.758

ctttaaaccatctggctctgtataaactttttt	CRISPR spacer
ttttcttaaatctggctctggatatactttttt	Protospacer
.***     *********** *** ********

7. spacer 2.6|1012261|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MN693450 (Marine virus AFVG_25M486, complete genome) position: , mismatch: 8, identity: 0.758

-tccagttaatttccatgttatttcctttcttta	CRISPR spacer
gtgtaaat-gttttcatgttgtttcctttcttta	Protospacer
 * .*. * .***.******.*************

8. spacer 2.14|1012789|35|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 8, identity: 0.771

caggacaaaaaatgaaaataactgcattaacaatg-	CRISPR spacer
ccacactaaaattgaaaataactgcatt-acagtaa	Protospacer
* . ** **** **************** ***.*.

9. spacer 2.6|1012261|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MN693220 (Marine virus AFVG_25M60, complete genome) position: , mismatch: 9, identity: 0.727

tccagttaatttccatgttatttcctttcttta	CRISPR spacer
cacttgttattttcattttatttcctttctttt	Protospacer
. *   * ****.*** ***************

10. spacer 2.6|1012261|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 9, identity: 0.727

tccagttaatttccatgttatttcctttcttta	CRISPR spacer
atgtatttgtttccattttatttcctttctata	Protospacer
 .  .** .******* ************* **

11. spacer 2.30|1013849|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

tggagcacctgaatatcagtctaatgatgatgtt	CRISPR spacer
tcaattaaaagaatatcaatctattgatgatgtt	Protospacer
* .* .*   ********.**** **********

12. spacer 2.30|1013849|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.735

tggagcacctgaatatcagtctaatgatgatgtt	CRISPR spacer
tcaattaaaagaatatcaatctattgatgatgtt	Protospacer
* .* .*   ********.**** **********

13. spacer 2.30|1013849|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.735

tggagcacctgaatatcagtctaatgatgatgtt	CRISPR spacer
tcaattaaaagaatatcaatctattgatgatgtt	Protospacer
* .* .*   ********.**** **********

14. spacer 2.1|1011932|33|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MH552526 (Siphoviridae sp. isolate ctfj46, complete genome) position: , mismatch: 10, identity: 0.697

ctttaaaccatctggctctgtataaactttttt	CRISPR spacer
tggttgaccatctggcattgtataaactttgac	Protospacer
.  * .********** .************  .

15. spacer 2.10|1012526|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctaccacgaaagaaaataaaacgctcagagagca	CRISPR spacer
ccaaaaccaaagaagataaaacgctcagaccaat	Protospacer
*.*  ** ******.**************  .

16. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK415404 (CrAssphage FA1-2_000172F, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

17. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK415403 (CrAssphage ES_ALL_000190F, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

18. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK415410 (CrAssphage YS1-2_2437, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

19. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MW067001 (CrAssphage sp. C0521BW15, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggtgct	Protospacer
*. ********* .************* ... .*

20. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MW067003 (CrAssphage sp. C0531BW4, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

21. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK238400 (CrAssphage ZA, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggtgct	Protospacer
*. ********* .************* ... .*

22. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MW067000 (CrAssphage sp. C0521BD4, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggtgct	Protospacer
*. ********* .************* ... .*

23. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MK069403 (UNVERIFIED: CrAssphage sp. O-152, partial genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

24. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to BK010471 (TPA_asm: Uncultured crAssphage, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

25. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to NC_024711 (Uncultured crAssphage, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

26. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to JQ995537 (Uncultured phage crAssphage, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

27. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MT006214 (CrAssphage LMMB, complete genome) position: , mismatch: 10, identity: 0.706

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggagct	Protospacer
*. ********* .************* ..  .*

28. spacer 2.4|1012130|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MN061582 (Acinetobacter phage vB_AbaP_IME546, partial genome) position: , mismatch: 11, identity: 0.676

aatctcatgggcaatttaataaaggaggtaaaat	CRISPR spacer
tgctggtttagcaatttaattaaggaggtaatat	Protospacer
 ...   * .********** ********** **

29. spacer 2.4|1012130|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MN395291 (Acinetobacter phage vB_AbaP_IME546, complete genome) position: , mismatch: 11, identity: 0.676

aatctcatgggcaatttaataaaggaggtaaaat	CRISPR spacer
tgctggtttagcaatttaattaaggaggtaatat	Protospacer
 ...   * .********** ********** **

30. spacer 2.20|1013187|34|NZ_CP014835|PILER-CR,CRISPRCasFinder,CRT matches to MW067002 (CrAssphage sp. C0526BW15, complete genome) position: , mismatch: 11, identity: 0.676

tgataaaagataacataatcaaaaagcaaacctt	CRISPR spacer
tattaaaagatattataatcaaaaagctggtgca	Protospacer
*. ********* .************* ... .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

185711 : 295347

106

Streptococcus_phage(58.82%)

terminase,portal,capsid,holin,tRNA,integrase,tail,transposase,head

attL 190975:190993|attR 245453:245471

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062707688.1\|185711_186176_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	9.8e-17	36.8
WP_062707691.1\|186407_186605_+	DUF3272 family protein	NA	NA	NA	NA
WP_062712301.1\|186585_187518_-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA
WP_062707693.1\|187842_189030_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.3e-141	67.2
WP_062707697.1\|189779_191042_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
190975:190993	attL	NA	NA	NA	NA
WP_062712303.1\|191221_191794_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_062707700.1\|191768_193055_+	CBS domain-containing protein	NA	NA	NA	NA
WP_062707702.1\|193080_193941_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_062707704.1\|193951_194878_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_062707495.1\|194913_196173_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.0e-160	69.0
WP_062707706.1\|196306_196747_-	GtrA family protein	NA	NA	NA	NA
WP_062707707.1\|196748_197690_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_062707710.1\|197691_198135_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_062707713.1\|198227_198995_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA
WP_062707716.1\|199259_199703_+	flavodoxin	NA	NA	NA	NA
WP_062707719.1\|199817_201029_+	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.4e-91	51.7
WP_062707722.1\|201157_201505_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_062707725.1\|201576_202248_+	hypothetical protein	NA	NA	NA	NA
WP_062707728.1\|202411_203506_-\|integrase	site-specific integrase	Q0R5B4	Streptococcus_phage	9.6e-71	42.2
WP_062707731.1\|203627_204404_-	DUF1828 domain-containing protein	Q4ZCC0	Staphylococcus_virus	7.9e-19	27.6
WP_062712305.1\|204430_204901_-	hypothetical protein	NA	NA	NA	NA
WP_062707734.1\|205062_205821_-	hypothetical protein	A0A1X9I5E4	Streptococcus_phage	1.0e-55	64.9
WP_062712320.1\|205942_206905_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_062707736.1\|207023_207431_-	helix-turn-helix domain-containing protein	O34035	Streptococcus_phage	7.2e-24	50.4
WP_062707739.1\|207601_207817_+	DUF739 family protein	A0A0S2MYC3	Enterococcus_phage	4.5e-17	63.4
WP_062707742.1\|208008_208614_+	antirepressor	A0A1W6JPC3	Staphylococcus_phage	3.6e-43	45.4
WP_062707745.1\|208822_209008_+	helix-turn-helix transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	1.2e-15	67.2
WP_062707748.1\|209176_209824_+	hypothetical protein	K4JTL7	Streptococcus_phage	4.8e-30	70.6
WP_062707751.1\|209912_210149_+	hypothetical protein	NA	NA	NA	NA
WP_157761182.1\|210150_210297_+	hypothetical protein	NA	NA	NA	NA
WP_062707754.1\|210296_210518_+	hypothetical protein	NA	NA	NA	NA
WP_062707757.1\|210510_210744_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	4.0e-11	60.7
WP_062707758.1\|210736_211345_+	HNH endonuclease	A1EAC5	Streptococcus_phage	1.4e-63	60.1
WP_062707760.1\|211328_212648_+	AAA family ATPase	A0A097BY67	Enterococcus_phage	1.1e-142	61.0
WP_062707762.1\|212675_213734_+	ATP-binding protein	A0A0K2CZH1	Paenibacillus_phage	1.2e-105	55.7
WP_157761183.1\|213769_213907_+	hypothetical protein	NA	NA	NA	NA
WP_062707765.1\|214487_216068_+	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	1.5e-237	77.6
WP_062707767.1\|216075_216315_+	hypothetical protein	NA	NA	NA	NA
WP_062707768.1\|216311_218570_+	AAA family ATPase	Q5YA88	Bacillus_phage	3.0e-284	64.5
WP_082785083.1\|218977_219274_+	DUF3310 domain-containing protein	A3F631	Streptococcus_phage	2.2e-30	81.1
WP_062712332.1\|219266_219662_+	RusA family crossover junction endodeoxyribonuclease	Q5YA86	Bacillus_phage	1.8e-43	63.4
WP_062707772.1\|219658_219880_+	hypothetical protein	NA	NA	NA	NA
WP_172793777.1\|219882_220029_+	hypothetical protein	NA	NA	NA	NA
WP_062707776.1\|220025_220319_+	hypothetical protein	NA	NA	NA	NA
WP_062707779.1\|220409_220829_+	transcriptional regulator	A7J289	Streptococcus_phage	4.2e-51	73.3
WP_062707782.1\|220940_221471_+\|terminase	terminase small subunit	A0A097BYA2	Enterococcus_phage	7.2e-32	46.5
WP_062707786.1\|221454_222729_+\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	2.2e-207	81.6
WP_062707789.1\|222739_224251_+\|portal	phage portal protein	A7J292	Streptococcus_phage	2.0e-196	67.9
WP_062707792.1\|224231_225599_+\|capsid	minor capsid protein	A7J293	Streptococcus_phage	1.0e-98	58.0
WP_062707793.1\|225601_225844_+	hypothetical protein	NA	NA	NA	NA
WP_062707796.1\|226066_226648_+	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	4.1e-28	47.2
WP_062707798.1\|226654_227542_+	hypothetical protein	A7J297	Streptococcus_phage	3.8e-118	74.6
WP_062707801.1\|227547_227895_+\|head,tail	phage head-tail connector protein	A7J298	Streptococcus_phage	4.0e-23	49.6
WP_062707803.1\|227904_228183_+	hypothetical protein	A7J299	Streptococcus_phage	6.9e-26	63.0
WP_062707806.1\|228179_228524_+	hypothetical protein	A7J2A0	Streptococcus_phage	1.2e-27	56.2
WP_062712338.1\|228533_228890_+	hypothetical protein	A7J2A1	Streptococcus_phage	1.6e-30	56.8
WP_062707809.1\|228905_229475_+\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	7.9e-61	71.1
WP_062707811.1\|229551_230040_+	hypothetical protein	A7J2A3	Streptococcus_phage	1.1e-29	43.2
WP_082785084.1\|230135_230348_+	hypothetical protein	NA	NA	NA	NA
WP_062707817.1\|230363_234809_+	tape measure protein	A7J2A5	Streptococcus_phage	2.7e-23	66.7
WP_062707820.1\|234818_235661_+\|tail	phage tail family protein	A7J2A6	Streptococcus_phage	2.7e-81	52.9
WP_099091491.1\|236852_240023_+	hypothetical protein	E4ZFN3	Streptococcus_phage	1.3e-99	34.2
WP_062707826.1\|240041_240251_+	hypothetical protein	NA	NA	NA	NA
WP_062707828.1\|240247_240790_+	DUF1366 domain-containing protein	NA	NA	NA	NA
WP_172793778.1\|240794_240962_+	hypothetical protein	NA	NA	NA	NA
WP_062707832.1\|240999_241299_+	hypothetical protein	Q938J6	Temperate_phage	1.5e-18	54.5
WP_062707836.1\|241300_241555_+\|holin	phage holin	Q708K1	Streptococcus_phage	2.9e-23	65.4
WP_062707838.1\|241565_242294_+	SH3 domain-containing protein	A0A097PAT3	Streptococcus_pyogenes_phage	3.3e-75	56.9
WP_062707842.1\|242429_243560_+	Fic family protein	D7RWK9	Brochothrix_phage	9.8e-95	48.1
WP_062712342.1\|244138_245287_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_062707845.1\|245542_247495_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	8.9e-144	45.6
245453:245471	attR	NA	NA	NA	NA
WP_062707846.1\|247593_249318_+	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_062707848.1\|249337_249856_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_062707851.1\|249905_250361_-	YueI family protein	W6LLD2	Streptococcus_phage	1.6e-16	31.1
WP_018380799.1\|250508_251810_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.0e-233	94.9
WP_062707860.1\|253701_254010_-	hypothetical protein	NA	NA	NA	NA
WP_062707863.1\|255225_264222_-	hypothetical protein	NA	NA	NA	NA
WP_172793775.1\|264190_264595_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_062707871.1\|265210_265483_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_062712344.1\|265493_265733_+	KH domain-containing protein	NA	NA	NA	NA
WP_062707874.1\|267404_268670_+	hypothetical protein	NA	NA	NA	NA
WP_062712347.1\|268842_270192_+	glycosyltransferase	NA	NA	NA	NA
WP_062707879.1\|270546_271065_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_062707882.1\|271054_271786_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_172793799.1\|271782_272796_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	7.8e-27	49.2
WP_062707889.1\|272925_273585_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_062707893.1\|273640_273919_-	hypothetical protein	NA	NA	NA	NA
WP_062707897.1\|273930_274161_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_062707900.1\|274184_276083_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.0e-84	32.4
WP_099091447.1\|276266_277019_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_062707903.1\|277015_277927_+	1-phosphofructokinase	NA	NA	NA	NA
WP_062707906.1\|277923_279903_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_062707909.1\|280869_281736_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_099091448.1\|281898_282429_+	glycoside hydrolase family 73 protein	Q332B8	Clostridium_botulinum_C_phage	2.6e-13	34.0
WP_062712353.1\|282546_283068_+	hypothetical protein	NA	NA	NA	NA
WP_062707920.1\|283131_283512_+	DUF1149 family protein	NA	NA	NA	NA
WP_062707923.1\|283511_284360_+	DegV family protein	NA	NA	NA	NA
WP_062707924.1\|284474_285242_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_062707927.1\|285241_286444_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	6.4e-36	44.6
WP_062707930.1\|286491_288363_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	9.6e-63	31.8
WP_062707931.1\|288376_289744_+	MATE family efflux transporter	NA	NA	NA	NA
WP_062707935.1\|289788_290124_+	hypothetical protein	NA	NA	NA	NA
WP_157761184.1\|290189_290336_+	hypothetical protein	NA	NA	NA	NA
WP_062707938.1\|290357_292100_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-33	23.9
WP_062707941.1\|292099_293872_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.5e-61	31.3
WP_062707495.1\|294087_295347_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.0e-160	69.0

DBSCAN-SWA_2

502028 : 510684

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062708458.1\|502028_502832_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-12	27.8
WP_062708460.1\|502844_503603_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-21	31.8
WP_062708462.1\|503628_504282_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_062708464.1\|504519_507054_+	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	1.2e-71	25.8
WP_062708466.1\|507117_508377_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.7e-162	69.3
WP_062708468.1\|508712_509384_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.9e-27	33.2
WP_062708470.1\|509376_510684_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	4.6e-19	30.8

DBSCAN-SWA_3

820605 : 829552

Enterobacteria_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062709197.1\|820605_821457_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	9.5e-26	35.7
WP_062709200.1\|821513_822440_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	1.8e-78	49.8
WP_062709203.1\|822456_822795_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_062709204.1\|823247_824360_-	RNA polymerase sigma factor RpoD	F4YCU2	Synechococcus_phage	9.2e-37	38.2
WP_062709206.1\|824368_826144_-	DNA primase	A0A1S5RH72	Helicobacter_phage	1.8e-50	32.4
WP_062709208.1\|826287_826659_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_062709210.1\|827066_827531_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.0e-14	36.8
WP_062709213.1\|827719_829552_-	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.9e-19	41.0

DBSCAN-SWA_4

979447 : 989095

Streptococcus_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062709486.1\|979447_980629_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	3.6e-172	76.9
WP_062709489.1\|980705_981254_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	4.6e-58	60.6
WP_062709492.1\|981253_982345_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.8e-154	73.8
WP_062709495.1\|982504_983143_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_099091460.1\|983229_983607_-	hypothetical protein	NA	NA	NA	NA
WP_062709501.1\|983703_984570_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.6e-113	73.5
WP_062712440.1\|984572_984893_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.3e-24	53.8
WP_062709503.1\|984923_985823_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.4e-58	42.6
WP_062709504.1\|985815_986463_-	dTMP kinase	M1PSC7	Streptococcus_phage	4.0e-69	62.6
WP_062709507.1\|986528_987188_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	1.3e-70	61.1
WP_062709510.1\|987620_988331_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.7e-16	27.0
WP_062709513.1\|988330_989095_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.4e-14	24.8

DBSCAN-SWA_5

1516843 : 1550120

Streptococcus_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099091476.1\|1516843_1518101_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.8e-158	68.3
WP_062710725.1\|1518143_1519613_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_062710728.1\|1520121_1521390_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.6e-160	68.6
WP_062710731.1\|1528411_1528969_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.7e-52	54.4
WP_062710733.1\|1528955_1529483_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_062710736.1\|1529463_1530396_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_062710739.1\|1530565_1532752_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	6.6e-265	62.5
WP_062710742.1\|1532847_1534380_-	hypothetical protein	NA	NA	NA	NA
WP_062710745.1\|1534650_1534956_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_062710748.1\|1534971_1535391_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_062710759.1\|1535390_1535657_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_062710764.1\|1535803_1536334_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_062710767.1\|1536333_1537002_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_062710770.1\|1537020_1537758_+	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	2.9e-31	39.2
WP_062710777.1\|1537828_1538323_-	hypothetical protein	NA	NA	NA	NA
WP_082785152.1\|1538753_1538885_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_062710780.1\|1541874_1542081_-\|transposase	transposase	NA	NA	NA	NA
WP_062710782.1\|1542128_1542479_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_062710785.1\|1542459_1542645_-	hypothetical protein	NA	NA	NA	NA
WP_172793792.1\|1549100_1550120_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.8e-34	32.6

DBSCAN-SWA_6

1637263 : 1647104

Streptococcus_phage(87.5%)

integrase

attL 1637243:1637262|attR 1648175:1648194

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1637243:1637262	attL	NA	NA	NA	NA
WP_062711017.1\|1637263_1638409_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	7.9e-76	42.3
WP_082785153.1\|1639373_1640009_-	helix-turn-helix transcriptional regulator	A0A1S5S7W3	Streptococcus_phage	4.6e-49	46.2
WP_062711022.1\|1640320_1640551_+	helix-turn-helix transcriptional regulator	X2KUC2	Streptococcus_phage	4.4e-10	48.5
WP_062711025.1\|1640714_1641347_+	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	4.7e-14	28.6
WP_172793794.1\|1641595_1641766_+	hypothetical protein	NA	NA	NA	NA
WP_062711028.1\|1641927_1642362_+	hypothetical protein	NA	NA	NA	NA
WP_062711031.1\|1642446_1642947_+	hypothetical protein	NA	NA	NA	NA
WP_062711037.1\|1643138_1643468_+	hypothetical protein	NA	NA	NA	NA
WP_062711039.1\|1643451_1643730_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.3e-21	53.9
WP_172793795.1\|1643719_1643869_+	hypothetical protein	NA	NA	NA	NA
WP_062711042.1\|1643870_1644710_+	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	6.2e-78	53.2
WP_062712525.1\|1644841_1646104_+	virulence-associated protein E	M1PKI6	Streptococcus_phage	1.0e-52	31.4
WP_062711045.1\|1646384_1646654_+	hypothetical protein	NA	NA	NA	NA
WP_062712526.1\|1646693_1647104_+	hypothetical protein	A0A1X9I5V5	Streptococcus_phage	1.7e-28	50.8
1648175:1648194	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2104118 : 2165722

Streptococcus_phage(27.78%)

bacteriocin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062712065.1\|2104118_2106770_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	4.6e-151	40.4
WP_062712068.1\|2106996_2108256_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.6e-160	68.8
WP_062712073.1\|2108483_2109419_-	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	2.5e-64	45.0
WP_062712076.1\|2110103_2110799_+	phosphoglycerate mutase	NA	NA	NA	NA
WP_099091486.1\|2111093_2113091_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_062712079.1\|2113112_2113709_+	recombination protein RecR	NA	NA	NA	NA
WP_062712081.1\|2113907_2114954_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_062712084.1\|2115181_2115748_-	folate family ECF transporter S component	NA	NA	NA	NA
WP_062712087.1\|2116081_2117452_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_062712090.1\|2117458_2118145_+	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_062712093.1\|2118283_2119828_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.2e-34	28.0
WP_062712096.1\|2120150_2120531_+	PH domain-containing protein	A5GZ63	Lactococcus_phage	4.1e-05	37.3
WP_062707495.1\|2120639_2121899_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.0e-160	69.0
WP_062712102.1\|2122862_2124455_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-56	37.7
WP_062712104.1\|2124577_2124838_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_062712107.1\|2124830_2125595_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_062712109.1\|2125852_2126383_+	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA
WP_062712112.1\|2126417_2126606_-	hypothetical protein	NA	NA	NA	NA
WP_062712115.1\|2126765_2127515_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_062712117.1\|2127584_2128256_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_062712120.1\|2128248_2130480_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	4.1e-60	63.0
WP_062712123.1\|2130697_2131348_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_062712127.1\|2131356_2132055_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_062712129.1\|2132074_2132902_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_062712131.1\|2132918_2133701_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-39	43.8
WP_062712133.1\|2133936_2134644_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.3e-40	41.2
WP_062712138.1\|2134636_2135983_+	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	9.4e-36	34.5
WP_062712141.1\|2135984_2136794_+	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	5.7e-36	36.7
WP_099091487.1\|2136929_2137631_+	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	1.2e-21	33.9
WP_062712144.1\|2137632_2141178_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_062712147.1\|2141566_2142328_+	HAD family hydrolase	NA	NA	NA	NA
WP_062712150.1\|2142329_2143166_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_062712575.1\|2143554_2144865_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_062712153.1\|2145105_2146365_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	6.1e-162	69.5
WP_062712157.1\|2146551_2147937_-	amino acid permease	NA	NA	NA	NA
WP_062712160.1\|2148210_2149044_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.3e-18	28.8
WP_062712167.1\|2149084_2149900_-	TIGR03943 family protein	NA	NA	NA	NA
WP_062712170.1\|2149896_2150802_-	permease	NA	NA	NA	NA
WP_062712172.1\|2150964_2151105_-	hypothetical protein	NA	NA	NA	NA
WP_062712175.1\|2151241_2152300_-	HAMP domain-containing histidine kinase	Q6XLV6	Feldmannia_irregularis_virus	1.3e-08	25.6
WP_062712178.1\|2152296_2152989_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.2e-32	35.6
WP_062712180.1\|2153150_2154296_-	fibronectin-binding SSURE repeat-containing protein	NA	NA	NA	NA
WP_062712183.1\|2155046_2156033_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_062712187.1\|2156638_2156983_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_062712190.1\|2156979_2157717_+	response regulator transcription factor	NA	NA	NA	NA
WP_062712192.1\|2157716_2159060_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_082785140.1\|2159095_2159248_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_157761216.1\|2159438_2160020_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_062712200.1\|2160769_2162920_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	8.8e-44	29.0
WP_018380426.1\|2163205_2163457_+	hypothetical protein	NA	NA	NA	NA
WP_062712202.1\|2163467_2163686_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_062712205.1\|2163698_2163929_+	hypothetical protein	NA	NA	NA	NA
WP_062712208.1\|2163957_2164323_+	hypothetical protein	NA	NA	NA	NA
WP_062712210.1\|2165047_2165722_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP014835.1|WP_062710111.1|1220151_1220742_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP014835.1|WP_062710111.1|1220151_1220742_+|hypothetical-protein

1220151_1220742_+

196 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.4083769633507853	0.9693877551020408	0.9792746113989638

HTH_XRE

Identity	Hit_domain_coverage
NA	NA

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014835

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information