CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	0 crisprs	NA	0	0
NZ_CP015009	Aminobacter aminovorans strain KCTC 2477 plasmid pAA04, complete sequence	0 crisprs	NA	0	12
NZ_CP015006	Aminobacter aminovorans strain KCTC 2477 plasmid pAA01, complete sequence	0 crisprs	NA	0	0
NZ_CP015008	Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence	0 crisprs	NA	0	0
NZ_CP015005	Aminobacter aminovorans strain KCTC 2477 chromosome, complete genome	2 crisprs	WYL,DEDDh,csa3,cas3,RT	1	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 13672

Shigella_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970070.1\|1576_2200_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067970381.1\|2214_3201_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_083948947.1\|3226_3580_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_067970075.1\|3572_3872_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_067970078.1\|3882_6339_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_067970081.1\|6310_7105_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_067970384.1\|7098_7320_+	entry exclusion protein TrbK	NA	NA	NA	NA
WP_067970083.1\|7313_8501_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
WP_067970086.1\|8519_9182_+	conjugal transfer protein TrbF	NA	NA	NA	NA
WP_083948948.1\|9195_10035_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_067970088.1\|10038_10485_+	conjugal transfer protein TrbH	NA	NA	NA	NA
WP_067970091.1\|10496_11801_+	IncP-type conjugal transfer protein TrbI	NA	NA	NA	NA
WP_067970097.1\|12863_13268_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	8.0e-15	44.2
WP_067970100.1\|13264_13672_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	5.7e-21	50.5

DBSCAN-SWA_2

17160 : 19112

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083948969.1\|17160_18138_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.0e-15	30.1
WP_067970109.1\|18149_19112_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-14	31.6

DBSCAN-SWA_3

26851 : 28340

Phaeocystis_globosa_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970120.1\|26851_27628_-	ABC transporter ATP-binding protein	R4TX06	Phaeocystis_globosa_virus	3.3e-09	30.6
WP_067970398.1\|27605_28340_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.8e-17	25.8

DBSCAN-SWA_4

35517 : 36982

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970142.1\|35517_36222_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.0e-12	28.0
WP_067970145.1\|36208_36982_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-14	25.6

DBSCAN-SWA_5

49522 : 57402

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970178.1\|49522_50707_+	SRPBCC family protein	A0A0P0IVM8	Acinetobacter_phage	9.8e-13	37.3
WP_067970181.1\|50760_51576_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_083948953.1\|51721_52525_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_157097315.1\|52616_52826_-	hypothetical protein	NA	NA	NA	NA
WP_169808418.1\|53432_53867_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	2.3e-12	35.3
WP_067970190.1\|53885_54833_+	DNA cytosine methyltransferase	NA	NA	NA	NA
WP_067970194.1\|55071_57402_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	4.1e-63	29.1

DBSCAN-SWA_6

62665 : 65196

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970214.1\|62665_63430_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-13	30.1
WP_067970216.1\|63429_65196_-	branched-chain amino acid ABC transporter ATP-binding protein/permease	A0A2R8FG22	Brazilian_cedratvirus	3.1e-10	27.3

DBSCAN-SWA_7

68942 : 70499

Hepacivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970228.1\|68942_70499_-	AMP-binding protein	Q75ZG1	Hepacivirus	1.4e-38	25.1

DBSCAN-SWA_8

73741 : 82046

Lactococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970238.1\|73741_74554_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.9e-31	32.9
WP_067970241.1\|74768_76160_-	FAD-dependent oxidoreductase	M1HTN0	Paramecium_bursaria_Chlorella_virus	1.7e-16	26.0
WP_067970243.1\|76233_76959_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_067970246.1\|76955_77696_-	EthD domain-containing protein	NA	NA	NA	NA
WP_083948958.1\|77740_78529_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	5.2e-10	39.4
WP_067970252.1\|78742_79585_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_067970254.1\|79559_80543_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA
WP_067970404.1\|80575_81280_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.9e-11	29.3
WP_067970257.1\|81272_82046_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-14	26.8

DBSCAN-SWA_9

97510 : 104011

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970294.1\|97510_98284_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-21	33.6
WP_067970298.1\|98328_99357_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	3.9e-42	32.2
WP_067970300.1\|99356_100301_-	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	2.8e-34	34.6
WP_067970303.1\|100302_101097_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_067970411.1\|101105_102020_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_169808422.1\|102337_104011_+	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.1e-20	29.8

DBSCAN-SWA_10

108301 : 117753

Brazilian_cedratvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970316.1\|108301_111604_-	Ti-type conjugative transfer relaxase TraA	A0A2R8FE73	Brazilian_cedratvirus	2.2e-14	26.1
WP_067970320.1\|111856_112120_+	TraC family protein	NA	NA	NA	NA
WP_067970322.1\|112124_112340_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_067970325.1\|112326_114258_+	Ti-type conjugative transfer system protein TraG	NA	NA	NA	NA
WP_067970419.1\|114358_114637_+	HU family DNA-binding protein	U5PV12	Salmonella_phage	1.9e-12	50.0
WP_083948966.1\|114735_115107_+	WGR domain-containing protein	NA	NA	NA	NA
WP_067970333.1\|115034_115346_-	DUF736 family protein	NA	NA	NA	NA
WP_067970422.1\|116874_117753_-	hypothetical protein	A0A1X9SH15	Bradyrhizobium_phage	2.3e-19	34.9

DBSCAN-SWA_11

126254 : 127436

Brochothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970433.1\|126254_127436_+	Fic family protein	D7RWK9	Brochothrix_phage	4.4e-37	29.0

DBSCAN-SWA_12

134419 : 137883

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067970366.1\|134419_135367_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	8.4e-31	50.0
WP_067970369.1\|135377_136712_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	4.3e-25	31.9
WP_067970372.1\|136863_137883_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	9.6e-57	39.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015005

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015005_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015005_1

4475663-4475755

Orphan

Consensus_repeat	Method
CTTGAACACAGTTGCCATGCCGTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015005_1

>merge|NZ_CP015005|1|4475663-4475755|CRISPRCasFinder
CTTGAACACAGTTGCCATGCCGTGAAGGTGAAGAATGCGGAGAGGGCAGAAGAAAGATCACCTGCTCACTTGAACACAGTTGCCATGCCGTGA

>NZ_CP015005|1|1|4475663-4475755|CRISPRCasFinder
CTTGAACACAGTTGCCATGCCGTGA	AGGTGAAGAATGCGGAGAGGGCAGAAGAAAGATCACCTGCTCA
CTTGAACACAGTTGCCATGCCGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015005.1\|WP_067963763.1\|4465919_4466792_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP015005.1\|WP_157097120.1\|4484812_4485436_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015005.1\|WP_067963792.1\|4479850_4480666_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015005.1\|WP_067963794.1\|4480888_4481395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015005.1\|WP_067963753.1\|4463009_4463957_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226967
NZ_CP015005.1\|WP_067963756.1\|4463953_4464970_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP015005.1\|WP_067963771.1\|4469524_4470256_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP015005.1\|WP_083948632.1\|4478738_4479335_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199214
NZ_CP015005.1\|WP_083948630.1\|4470704_4471868_+\|YjhT-family-mutarotase	unknown	unknown	gnl\|CDD\|237617
NZ_CP015005.1\|WP_067963779.1\|4472090_4474292_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP015005.1\|WP_067963766.1\|4466793_4467753_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP015005.1\|WP_067963769.1\|4467941_4469528_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP015005.1\|WP_157097119.1\|4482932_4483640_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015005.1\|WP_067963788.1\|4477663_4478599_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|226005
NZ_CP015005.1\|WP_157097118.1\|4477325_4477478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015005.1\|WP_067963750.1\|4461818_4462784_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP015005.1\|WP_067963785.1\|4476032_4477181_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349918
NZ_CP015005.1\|WP_067963759.1\|4464978_4465896_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|223406
NZ_CP015005.1\|WP_067963796.1\|4481773_4482940_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319270
NZ_CP015005.1\|WP_083948633.1\|4483590_4484397_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|273146

Protein	Function_ID	Function_description	E-value
NZ_CP015005.1\|WP_067963763.1\|4465919_4466792_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.29438e-93
NZ_CP015005.1\|WP_083948633.1\|4483590_4484397_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	2.29119e-57
NZ_CP015005.1\|WP_067963753.1\|4463009_4463957_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	1.21991e-138
NZ_CP015005.1\|WP_067963756.1\|4463953_4464970_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.17728e-173
NZ_CP015005.1\|WP_067963771.1\|4469524_4470256_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	4.61827e-53
NZ_CP015005.1\|WP_083948632.1\|4478738_4479335_-\|hypothetical-protein	gnl\|CDD\|199214	cd10146, LabA_like_C, C-terminal domain of LabA_like proteins. This C-terminal domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain an N-terminal LabA-like domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain) has been shown to play a role in cyanobacterial circadian timing. LabA-like C-terminal domains described here may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains).	9.33732e-23
NZ_CP015005.1\|WP_083948630.1\|4470704_4471868_+\|YjhT-family-mutarotase	gnl\|CDD\|237617	PRK14131, PRK14131, N-acetylneuraminate epimerase.	1.6483e-154
NZ_CP015005.1\|WP_067963779.1\|4472090_4474292_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	3.30505e-92
NZ_CP015005.1\|WP_067963766.1\|4466793_4467753_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.92502e-124
NZ_CP015005.1\|WP_067963769.1\|4467941_4469528_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.75242e-119
NZ_CP015005.1\|WP_067963788.1\|4477663_4478599_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	3.55501e-29
NZ_CP015005.1\|WP_067963750.1\|4461818_4462784_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.27984e-26
NZ_CP015005.1\|WP_067963785.1\|4476032_4477181_-\|amidohydrolase	gnl\|CDD\|349918	cd05668, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial uncharacterized proteins predicted as putative amidohydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	1.7353e-166
NZ_CP015005.1\|WP_067963759.1\|4464978_4465896_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|223406	COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane].	1.08189e-90
NZ_CP015005.1\|WP_067963796.1\|4481773_4482940_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319270	cd16413, DGQHR_domain, DGQHR motif containing domain. Uncharacterized diverse domain family with conserved DGQHR motif, in addition to QR and FXXXN motifs. Some proteins have been identified as parts of DNA phosphorothioation systems. Related to dndB, which acts in the regulation of DNA modifications, including DNA phosphorothioation. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	9.96392e-59

>NZ_CP015005.1|WP_067963779.1|4472090_4474292_-|EAL-domain-containing-protein
MVVQSHPRPLTFQVTLTVLALAVLGLGLAAGFGLLATLQVDRAALDTERTFLVNGLKEEAEALRREQESIAVWDDAVTYAKSGDQQWMAENLGAWMHSYYGHDRVYVLDDHDQPVHAMRDGQTVASEVFAEDRNAILPLVGRVRQVLAAGSSDTAGKAAAEDLVTIGDRPAILSVMPLVPSSDRVAQSPGSEFVHVAVQFIDEALTGRIASRYQLKNLHVLPRLTQTITDATVPLIGSHGVILGYVGWQQARPGTSLVREAAPALFGAMAISAAILIYLLRRLRRASGQLQISQDKARYLAFHDTLTGLPNRALFEDRLRRALVNADRDKGRVALLYVDLDRFKHINDTLGHPAGDELVRQTAVRLVQSVREIDTVARLGGDEFAIILSGVKDARNAEDFCDIMLAQFSIPFQLADDQVFVSTSIGIALSPDVGADPDDLLRKADIALYEAKKNGRGRYQVFAGDMDEILLRKRRIESELREALTSGDQIRLTYQPIYAGDCQTILGAEALLRWAHPIHAALPPGNLVAIAEERGMIGLLGDYVLRQAACFAATSTLPWVAVNVSPLQLRDKGFPERLARLLEECGLTPSRLQLEITESVLLANNDTTRSVLAELRATGILVALDDFGTGYSAISYLRHHRIDKLKIDRSFIQTIGSDAGAAAIAKALVDLALALDIRVTAEGVETEAQKDRLIAMRCHEFQGYLLSPPLEATELSAVLAGGAQPLHMVGSRD
>NZ_CP015005.1|WP_083948630.1|4470704_4471868_+|YjhT-family-mutarotase
MAADAWPDLPIGIKSGIAARIGDTLYVGLGSAGSDFYALDLADPAAGWVRRAAFSGPATNGAAAAVSGGRIFVFSGNGKESDEARSAIIFDTVYAYDPDTDGWTKVDTTTPVGLSGAKALALQDGRIALVGGYNKELFDDYLAKVAATDKEKNPDGFRKLVDAYMGMPPADYRWNAELLSYDPRANSWSSLGDSPFLPNCDAAVAALGDDAFTLISGEIKPGLRTPEVKKVSISGSSAAWQKLADLPSPEANDRQEGVAGAFAGDVGGAVLVAGGANFVGAQANAADGKWFAHDGLKKGWRDEVYVYDKAPDGTAVDGEAGGQTSGNKASSGKIWREVGKLPTGLAYGASFPVSGGLLIVGGEDGEATPRREVFLMKWDGKALSIEH
>NZ_CP015005.1|WP_067963771.1|4469524_4470256_-|FadR-family-transcriptional-regulator
MSLKSIKPLKRAPLLHVSVQESLRAYIDDNGLAAGAPLPPEGELATQLGVSRNSVREGIKALESLGVVESRRGIGVFVKAFSFEPLLENLAYGLGDALKQIEEVITIRRTLEVGLIDRTLELIGKDDIAELRETLDKMKALAERGESFPDEDRHFHYLLFRCQDNEVLSRLIEVFWLAFYKASDFVNLDNADPVQTWRDHAAIVDAVEAGDLAAAKDRLANHYAGITKVIADNKTHQSNGRST
>NZ_CP015005.1|WP_067963769.1|4467941_4469528_-|ABC-transporter-substrate-binding-protein
MNYRTMISALALSAALFAGAATTAAPANAQGATISGGFDVGPGGFQGNFNPLAATGGFTWLVTYFEPLVIYDDKLAKIIGALADSYEVSADQKAYTFKLTDTKWHDGKPFTAKDVKFTIELAKNDKAGSVFAARLGAIETVETPDDRTVIVKLSSATPSMLDTLTKLMMLPEHALAAIPVEQIAKNAWWSTQPVGTGPFKFTKYVADQYVELAANPDFHGGKPAAEKLINRYFANPAAAIAALRAGEIQFTYVDSNDVSTFTGDNAFTVIEGDSYVVNYVGFNQEVPLWKDLKVRQAFMHAINRDAIIQSLYGGAAKPANCVYVADRLVPQGIDQYAYDPEKAKQLLAEAGWDKINGDKPITILTYYTSPLATNVLAAMQAMLAQVGINIVPRAVDTPTYNSVVYQQSGNAGDFPLIYAGLQNGPDASNINIGLNEKQIPPAGANLMRIRMPEVTNALDAALAETDAAKRDARYQDVCKATNANLPWGTMWVANRYGVASSKLKDFVWTPAPAGGPYQAHPEKWSIAD
>NZ_CP015005.1|WP_067963766.1|4466793_4467753_-|ABC-transporter-permease
MLRYCLNRLLIGLGMLLALTVLIFVLLQLTPGDPIDAYIDPNVAMSKEAMDALRAQLGLDRPLPVQYLAWLSQAVQGNLGHSLQRFNETVSGLIVSRIGPTLLLMGAGLAIAIVVGIASGIVSAVRRNSLPDYSFSVLALLGISSPAFLTAFLGLYLFSVRLKWAPSGGMLTPASDFSIADLLHHLILPACVLSIGHAALIMRYMRASMLEVLNQDYVRTARAKGVKEFWVVTKHALRNALLPVVTLIGSTIGLAVGGAIFIESVFNWPGMGLLLISAVETRDYPVIMGATLVIGACVIVVNILTDLAYAVIDPRIQVA
>NZ_CP015005.1|WP_067963763.1|4465919_4466792_-|ABC-transporter-permease
MSVLTLSSTGPMARAYNRFTQNRAALFGTALLLPMLVAVLSYPLWLPYKPNDIDLLAMNGAPSLKHWFGSDGVGRDVLARTLEGGRISLLVAVSSVVLSTGIGFLVGAISAFGGRWADALAMRSVDLAMTLPPVIFLLVLASIVGSGIWSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLGLGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGAALVLVVLAINFIGDGLRDAFDPRADLN
>NZ_CP015005.1|WP_067963759.1|4464978_4465896_-|dihydrodipicolinate-synthase-family-protein
MSKFFGVVPPVVTPLYDDFSVDYASYTRVLDYLIDNGCHGLFPLGSTSEVVFYDDAERRKILEHTVKVANGRVPVIAGVIDPTTDRVIRHAQTARDVGADAVVVTAPFYTITSQAETLDHFRIIRDAVDIPLIAYDIPVCVHSKLARQTVVTLAREGTIVGLKDSSGDDGNFRYALSDLADTKDVFLMTGSEIVVDNALQMGAHGVVPGLANVDPAGYVRLWNHAQKGDWEAARKEQERLCRLFEIVWVAAGRVSGGATGVGGFKTAMRSLGIISTNVMARPRAPLNDAETARIDEILRSVGLLN
>NZ_CP015005.1|WP_067963756.1|4463953_4464970_-|ABC-transporter-ATP-binding-protein
MRTEPILEIKGLRTVFRVRGREIAAVNGIDLVVHAGETVALVGESGSGKSVTSLSVMRLLARGIGAIDAGEMLFRGKDGNVRDLVSLDEEAMRRIRGNDIGMVFQEPMTSLNPVYSIGDQISESLRVHRGTGRSAALEAAVALLDKVGIPDARRRAGQYPHELSGGMRQRATIAMALACDPTLLIADEPTTALDVTIQAQILDLLQGLQRERGMGVLFVTHNLGVVAEIADRVAVMYAGRIVECGPVAEVFRNPRHPYTLGLLNSMPRLGAASAMKRAGEKLNAIPGMVPSLADMPAGCAFAPRCGFAIEACRQNIPALESVAAGHGSRCIRWQEIAR
>NZ_CP015005.1|WP_067963753.1|4463009_4463957_-|ATP-binding-cassette-domain-containing-protein
MTPLLSVRGLAKHYQTRGATLKILEDISFDVFRGEVVGLVGESGSGKTTIGRSVLRLIEPTAGEVSFDGTDITKLSNGEMRRRRPRMQYIFQDPYASLSPRMTIGEILTEGLKIQGIGTRAERLERAKKALEQVELPADAINRYAHEFSGGQRQRIGIARALTLAPEFIVADEPVSALDVSIQAQVVNLLRDLQQRLGLTMLFISHDLAVVEYICDRVIVLYLGRIMEIATTEDLYARPEHPYTRALMSAIPSPDPEAKKAREILKGDIPSPANPPSGCVFRTRCASALDACAAAAPELREVRPGHFKACIRDDL
>NZ_CP015005.1|WP_067963750.1|4461818_4462784_-|Gfo/Idh/MocA-family-oxidoreductase
MKLSFLGVGHWHATMHGEAALAAGAGIASAWDPEPEAAAGFAQKFGCPVAPSLQAALEHADLAVVMGRPFEIVERGLQVIAAEVPLLLEKPVGISADATDALIAAAQRKAAFVAMALPHGMAMMAALGDLDAAGRRGPISHSHFRLINGPPQRYVDDGVAWVLDPAIGGGGALRNLGIHGINAFLMLAAGQEVEIASASFGRPLHGTKVEDYAAIVLRAADGMLGLIEAGYTFASMKRGLFEWRVSAANATLSDFGDRLALATLDDEKQTDLPATPIARRYHDVMADTLQRLAEGRPPAVSLADARRAMAIIDRCYALERA
>NZ_CP015005.1|WP_067963785.1|4476032_4477181_-|amidohydrolase
MTLTNHDLVELTAWRRQLHRHPEISNEEKDTAAAVVAFLSDSGPDKVLTGIGGHGVALVYDGAAPGPTVLFRCELDALPIEELSEVAHASRVPGKSHMCGHDGHMAIVAGLGWRFGRQRPARGRVVLMFQPAEETGDGAAAVVADPRYQEIAPDFAFSLHNLPGVPLGDVRLKAGTVNCASRGMRVRLTGKTAHSSMPETGTSPRLAVAELITAFPGLGSETFADDGFRMVTVTHATMGEAVFGIAPGYAEVWACLRTRQDDNMASLCAAAEQLVAETAAASGLDHAVSYHEIFVASVNAEDAVEHLRQALDEEGISHSEEALPMRASEDFGLFGRSASSAMFFLGAGTTHPSLHNPDYDFPDDLIPIGARVFARVADNLLG
>NZ_CP015005.1|WP_157097118.1|4477325_4477478_-|hypothetical-protein
MLIDQAFGLSVAIVPFQTGTFAQRAARPLKGGRCWLKPQTRAVALVLRKG
>NZ_CP015005.1|WP_067963788.1|4477663_4478599_+|ankyrin-repeat-domain-containing-protein
MELLSSEDAMIKQARMWMIGASAALWLLALPAQANELGDLVRSGDVAAVTSALDKGAAIDEIDGVTALYIACETGNAALAELLITRGADVNLPVSWQRTPLYAATRAGFADIVKLLLGHGADPNQLAKAQTPLHVAAEAGCLACVTSLVEAGAEVNALTSNGSPPIHLAKLAGHDDVVAYLTSHGAHGPDIAAISPRLASADAQAGKEIFGKSCAACHLSAPGLKVPKRANLWGIVGRPKGSQGDVAYSASLKQAGGSWSFEDLNAFISNPALTLPGTDMSFPGLADETQRADLIAYLRTLSETPLPLPDK
>NZ_CP015005.1|WP_083948632.1|4478738_4479335_-|hypothetical-protein
MKGRIRRHVDAIGDVGMGRRHQQAAGEPAKPSLLLCHPSLPKPAASSRPGIFAQEGRRGPARIREQGVDVFGFGEQKTRESFRQASRRFTYTEDLLPDAPANAEAAESKSKPLQPPSAAAPIIRRVLDQVETEDGWASLSAVGKQLSNLSSDFDPRNFGFRKLSDLVRGTNVFEIENPEGRGMRIRKKPAPAKPKPKS
>NZ_CP015005.1|WP_067963792.1|4479850_4480666_-|hypothetical-protein
MPNDSVIREALAHARFKIEWANNHINAVEALVISVVAENQSVVNIQDDLETGLALVIIGPKQHIPVSLPLHIGDAIHALNSVWDYLWSGLARSIDSSLASKITAPRHEARKNLKADIDDAKGRHRPIHRAFPQAEAFVLDIVKPYNPANGGSVIWDLGKLDNISKHRLLIATPYVISFDVDLTLEGSDGGKIVQTAGAAIQTQGHPLVCGLTPPVKIHDEPKAAVTVVFGERDHFSAQPVVETLAQLVDATSELCNLFEKEFLGSNVGLLP
>NZ_CP015005.1|WP_067963794.1|4480888_4481395_+|hypothetical-protein
MSARLSTAIRISQAAKAILRKTRSFPTAGFGEHEDLSERGHVGIEPMLLALAMELALKAWFVFDHDDPKAPRSHDLIKLFEALLPESQEKLDAEFKRSVASCHPQFFYVDYSIRHILYQHKDAFIDWRYLHEPKSTKFEQVVFEATLEMVLREFDKRYRTEQVVTLSI
>NZ_CP015005.1|WP_067963796.1|4481773_4482940_-|DGQHR-domain-containing-protein
MADLLSGLADPNEKSYTFPVIKVEQPVGDIFLASIPWDIITKIAYFDVRRVIDEERDVERYLGIQRPLDLQRVKKLEDYVNFFDASFPTAIIIAVDDKYASFDETRGTLTLSNTQAGETEPSIAINNIARVIDGQHRIAGLLKFRGDRFDVPVSIFVGADVADQAQIFSTVNLEQTKVHKNLVYDLYSLARSRSPQKTCHNIAVALDQDDKSPLFRRIKRLGGASVFGHFEPISQATFVESLLKYITADAKQDRDTLLRGRIPHRAVGTDIIKFPFRNLFVDEKDVQIGEEVYKLFALVASRWPKAWNDERREGLMLNRTNGFRAVMRLYGFLFREHGLHGTSLPVDFITHHLKSVPLDDEDFNTEVFVPGSSGEGKLYRVLIGDETI
>NZ_CP015005.1|WP_157097119.1|4482932_4483640_-|hypothetical-protein
MGDRKPQKKLYTLDRVKGAIWRKLRDMASSIKSAMAGLFKATPLVGRLSESKRSSVLSASKELVLSTLFSTIPIWFFPIIYTYFFSNTPPLLTNMKAYVDQGDLYIYSSAMIGPLIFAITSNYAEWGAKNDSPSVSRLGRLSFVFPYGVWFLSIAVLISMVAVICFGLMRFESSGFIDAKLNKDSLLTFSIFMYAVSLVCLFLVSVYRNDLSDTSASDARASTADFLKDWSKRNG
>NZ_CP015005.1|WP_083948633.1|4483590_4484397_-|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase
MALRPFLKWAGGKRWLVERSEFQVPSFSGNYIEPFLGGGSVFFHVAPDRSIISDLNTRLVEAYLSIKCDWQSVVTFLESHQKRHSPQHYYAERAMEYSNVAERGAQFIYLNRACWNGLYRENLRGQFNVPIGSKTKILYEYDDFRSVSERLKNAEIVNCDFEVSINRAGDSDFLFVDPPYTTAHNFNGFVKYNQKIFSWDDQIRLRNALVRAAHRGCAIIVTNAGHSSISELYNGVGRITELSRASVISGKVDGRQETSEKVIYIGPR
>NZ_CP015005.1|WP_157097120.1|4484812_4485436_-|hypothetical-protein
MGKAGMGTVGEAGMGKVGKAGLSKSATSKSAKSISGTGRAKKQPKPPSPLVTVEVENPDWRPARDGEKAFPRIIAAQKNIRESAVETLFARGFLARAQKQAADRFRACWEKAGGTVRSLDHTLDRVDGGRGDPLAARIVAANELKRCRQLVGHRGYQVLQLVCAEGRALAEITPHKRERLTMADNLRADLDDLAAMWGIQTGRRRVG

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Crispr_ID: NZ_CP015005_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015005_2

4626717-4626798

Orphan

Consensus_repeat	Method
TTTCTCATCCCGGAAGCCTTCGGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015005_2

>merge|NZ_CP015005|2|4626717-4626798|CRISPRCasFinder
TTTCTCATCCCGGAAGCCTTCGGCTGAGCATCGAAATCGGGCGCAAAAAGCCCGCTTTCTCATCCCGAAAGCCTTCGGCTGA

>NZ_CP015005|2|2|4626717-4626798|CRISPRCasFinder
TTTCTCATCCCGGAAGCCTTCGGCTGA	GCATCGAAATCGGGCGCAAAAAGCCCGC
TTTCTCATCCCGAAAGCCTTCGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015005.1\|WP_067964073.1\|4619606_4620827_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|224475
NZ_CP015005.1\|WP_083948640.1\|4630625_4632962_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
NZ_CP015005.1\|WP_067964085.1\|4630270_4630594_+\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|235016
NZ_CP015005.1\|WP_067964078.1\|4623467_4624409_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP015005.1\|WP_067966850.1\|4622673_4623411_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|171820
NZ_CP015005.1\|WP_067964065.1\|4615926_4616949_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|235402
NZ_CP015005.1\|WP_067964093.1\|4637396_4638866_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236384
NZ_CP015005.1\|WP_083948781.1\|4624837_4626694_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP015005.1\|WP_067964066.1\|4616945_4617776_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP015005.1\|WP_165915809.1\|4617945_4618554_-\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP015005.1\|WP_067964082.1\|4628056_4628635_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP015005.1\|WP_067964080.1\|4627107_4627593_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_CP015005.1\|WP_067964075.1\|4620926_4622189_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NZ_CP015005.1\|WP_067964091.1\|4636712_4637315_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|224205
NZ_CP015005.1\|WP_067964071.1\|4618602_4619493_-\|YicC-family-protein	unknown	unknown	gnl\|CDD\|224477
NZ_CP015005.1\|WP_067964083.1\|4628801_4630169_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225139
NZ_CP015005.1\|WP_018427106.1\|4627592_4627841_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP015005.1\|WP_067964089.1\|4635280_4636684_+\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP015005.1\|WP_055978681.1\|4622218_4622455_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP015005.1\|WP_067964088.1\|4633539_4635039_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676

Protein	Function_ID	Function_description	E-value
NZ_CP015005.1\|WP_067964073.1\|4619606_4620827_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	1.19204e-140
NZ_CP015005.1\|WP_083948640.1\|4630625_4632962_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.49529e-51
NZ_CP015005.1\|WP_067964085.1\|4630270_4630594_+\|YnfA-family-protein	gnl\|CDD\|235016	PRK02237, PRK02237, YnfA family protein.	5.8402e-39
NZ_CP015005.1\|WP_067964078.1\|4623467_4624409_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	6.43879e-132
NZ_CP015005.1\|WP_067966850.1\|4622673_4623411_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|171820	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed.	4.74874e-169
NZ_CP015005.1\|WP_067964065.1\|4615926_4616949_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|235402	PRK05312, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase PdxA.	0
NZ_CP015005.1\|WP_067964093.1\|4637396_4638866_+\|amidophosphoribosyltransferase	gnl\|CDD\|236384	PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional.	0
NZ_CP015005.1\|WP_083948781.1\|4624837_4626694_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	2.5855e-100
NZ_CP015005.1\|WP_067964066.1\|4616945_4617776_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.66285e-130
NZ_CP015005.1\|WP_165915809.1\|4617945_4618554_-\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	8.70849e-114
NZ_CP015005.1\|WP_067964082.1\|4628056_4628635_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	3.56627e-71
NZ_CP015005.1\|WP_067964080.1\|4627107_4627593_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	4.87868e-52
NZ_CP015005.1\|WP_067964075.1\|4620926_4622189_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NZ_CP015005.1\|WP_067964091.1\|4636712_4637315_+\|CvpA-family-protein	gnl\|CDD\|224205	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only].	3.3906e-47
NZ_CP015005.1\|WP_067964071.1\|4618602_4619493_-\|YicC-family-protein	gnl\|CDD\|224477	COG1561, COG1561, Uncharacterized stress-induced protein [Function unknown].	1.92605e-114
NZ_CP015005.1\|WP_067964083.1\|4628801_4630169_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	1.23913e-139
NZ_CP015005.1\|WP_018427106.1\|4627592_4627841_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	7.54214e-37
NZ_CP015005.1\|WP_067964089.1\|4635280_4636684_+\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP015005.1\|WP_055978681.1\|4622218_4622455_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	8.32777e-34
NZ_CP015005.1\|WP_067964088.1\|4633539_4635039_+\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0

>NZ_CP015005.1|WP_083948781.1|4624837_4626694_+|LTA-synthase-family-protein
MITLAVSAVLVFAIEFVARGSFVDTLNFFQQPFKPSWTTVALFALLIIGFDALLGRPYNGLLVVAPVALALAFVGHQKSLYLGDPLYPTDFLYIRQIVELMPLLVRERPLAGIGIAAGLIGGISLLVLAWRYWRRRMPALSFWARMSRLAIAIPALAFFVSIMDYATFSWTRDRLQIIPMMWDQKENYASNGFAIAFALNVPMAKVKAPQGYSDKAIDAIAAPSQAAAVLPEEKPDVIIVMSESFWDPTRLPGVSITPDPIQNVRAAQSGHVFSPEFGGMTANVEFEALTGFSNAFLPAGSIPYQQYVRAPVPSLATFFKSEGYDTKAIHPFGSWFWNRSFVYKDFGFDTFLSEENLPPLEKRGPLVSDAALTEEIIRQADATDHPFFFFAVSLQSHGPYEPNRYSDTTHKVDAPTSQWTRDSILTYAEGASDADRGLKRLMDWASKRERPTVIAFFGDHLPPLGPVYVETGFMKEPVAKRKAPLDEMLVQHETPLVVWSNRTGAARDIGSISPAFLPLHVLETAGISHPYYTGFLGDLHDRYRVVDRNMLMPRQGQSVFDWSRQKELDPAIRDFRWLQYDMMFGKRRGAKGFFPETVDKVVANRTRSPLFVRDEAFS
>NZ_CP015005.1|WP_067964078.1|4623467_4624409_-|ACP-S-malonyltransferase
MAVAFTFPGQGSQAVGMGKELADAFPEARRVFEEVDDALGEKLSKLIWEGPEETLTLTANAQPALMAVSMAAFRALEARGLSLKDKVSYVAGHSLGEYSALAAAGFVSVADAARLLRIRGNAMQAAVPAGQGAMAAIIGLEQGDVDAACAEAAQGSVCQIANDNGGGQLVISGEKAAVERAAALCTAKGAKRALMLQVSAPFHSALMAPAAEKMREALAGVKKNVPVVPVVANVSVTPITDPEEIAARLVEQVTGRVRWAETVEWFGNNGVTTLYEVGAGKVLSGLARRINKEIATSAVNTPADVEAAIAALA
>NZ_CP015005.1|WP_067966850.1|4622673_4623411_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MLDLTGRKALVTGASGGIGEEIARILHSQGAIVGLHGTRIEKLEALAGELGDRVKLFPANLADRDEVKALGQKAEAELEGVDILVNNAGITKDGLFVRMSDADWDSVIEINLTAMFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTEKLNDKQKEAIMAAIPAKRMGTGKEVASAVAYLASDEAAYVTGQTIHVNGGMAMI
>NZ_CP015005.1|WP_055978681.1|4622218_4622455_-|acyl-carrier-protein
MSDTAERVKKIVIEHLGVDADKVTEAASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKYIDKASA
>NZ_CP015005.1|WP_067964075.1|4620926_4622189_-|beta-ketoacyl-ACP-synthase-II
MRRVVVTGLGLLSPFGMGYEHGWKELLSGRSAARRITEFEVDDLACKIANVIPRGDGSNNSFNPEAVLEPKELRKIGDFILYGIAAADEALKDSGWQPKTPDEQNSTGVMIGSGIGGIDGIAENALILKERGPRRISPFFIPGQIINLVSGQVSIRHGLKGPNHAVVTACSTGAHAIGDAARLIMFGDADVMVAGGAEAPVTRLSLAGFAACKALSTDRNDDPEKASRPYDRDRDGFVMGEGAGVVVLEELEHAKARGARIYAEVVGYGLTGDAHHITAPAEDGDGAFRCMSAALKRANLTPADIDYINAHGTSTMADTIELGAVERLVGNAASKVSMSSTKSSIGHLLGAAGAAEAIFSILAIRDNIVPATINLDNPERETAIDLVPNTPRKRQVDVALSNSFGFGGTNASLVFQRFNG
>NZ_CP015005.1|WP_067964073.1|4619606_4620827_-|endolytic-transglycosylase-MltG
MSINTPGQGEGAPRAAPANPVSANPIVPKTAQEALRPEAGTPPPSKRSRASRNQVVVFLNFMMSTAVLVILASGAALYFGKQEFGGAGPSTVPATFLVKPATGVADIADQLERRGLISDARIFRMGVRAYGNDGSLKAGEYEIQAGASMHDIMELLKSGKSVQYSLTIPEGLTVEQAWKRIAEQEALSGDMPTEMPAEGTLAADTQRFTRGLTRQQIVNKMLADQKELVETIWARRSPDLPLADINEFVTLASIVEKETARGDERSRVAAVFINRLNKGMRLQSDPTIIYGIFGGKGKPADRPIYRSDIDKPTPYNTYTIKGLPPTPIANPGKASLEAVANPSKTKDLYFVADGSGGHVFAETLDEHNENVARWRAFQRKVVEDEKAADEADPAKKDAATTNAVKK
>NZ_CP015005.1|WP_067964071.1|4618602_4619493_-|YicC-family-protein
MTLQSMTGFARVAAEHQGTAIAWEVKSVNGKSVDVRLRLPQGFERLEPAVRQAIQKRFSRGNVQATLTVSRTAGAMVQPVINENFLRDVAELATRLVEQYGAAPASADGLLALRGVFDMPEAVETEEQRAAIDAVIMDGLEKGLAGLVEARKAEGEALRALLSDHIATIETLTVQAEADPSREPAQIRQRLAEQVRLLLEASPALDETRLNMEAAFLATKADIREEIDRLKTHVASARILLAGGGAIGRKLDFLAQEFNRESNTLCSKSNAAAVTAIGLELKAVVDQFREQVQNLE
>NZ_CP015005.1|WP_165915809.1|4617945_4618554_-|guanylate-kinase
MLVLSSPSGAGKSTISRNLIETDPELKLSVSVTTRPRRGSEIDGAHYHFTSKREFELLRDNDALLEWAEVHGNFYATPREPVELAMSQGRDMLFDIDWQGAKQLKEKMRGDIVSIFILPPSMGELKARLKRRAEDQDAVIETRLKNARDEIEHWGEYDYVVINEDLNRAFAEVRAIVAAERLRRDRRPGLFDFVSKLLDEKL
>NZ_CP015005.1|WP_067964066.1|4616945_4617776_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSTSIDGLPPLRDVIERHGLQAKKALGQNFLLDLNLTGKVARAAGDLTGVTVIEVGPGPGGLTRALLMHGAKKVIAIERDERCLAALAEVSDHYPGRLEVVSGDALKTDFASLAAGEPVKIVANLPYNIGTELLVRWLTVETWPPFYQSLTLMFQREVAERIVAKPTSSAFGRLGVLAGWRTDARIAFDVPPQAFTPPPKVTSSVIHLEPRREPLAADVKVLGRVTEAAFGQRRKMLRQSLKSMGGEKLLQAVGIDPTRRAETLSVEEFVALAKAV
>NZ_CP015005.1|WP_067964065.1|4615926_4616949_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MASSSLPLALTSGDPSGIGPEIAVAAWRQREAAGVPPFYLLACPKLIAARARAVGVDVAIVETDPAGAAQAFAEALPVVPLTAPFIDTPGQTDTANAAGIIEAIDRAVADTFEGRAAAVVTCPIAKKPLYDAGFRFPGHTEYLAHLATERTGVDTTPVMMLAGPELRAVPVTIHIALAEVPKALTTEAIVETARITARDLSARFGISRPRIAVSGLNPHAGEGGAMGHEDERIIRPAIAALKAEGIDAFGPLPADTMFHARARAGYDAAICMYHDQALIPAKALAFDETVNVTLGLPFVRTSPDHGTAFDISGKGIARPDSLIAALKLARLLADGEAKAS
>NZ_CP015005.1|WP_067964080.1|4627107_4627593_+|30S-ribosomal-protein-S6
MALYEHVFLARQDLSQQQVDALVEHYKGIITAAGGSVGRVENWGLKSLTYRINKNRKAYYTLMDITAPSAAVKEVERQQGLSEDVLRFMTVKVEAHEEGVSAMMQKREERSERGERGGFGDRPQRSFGDRGDRGPRSFGDRDGGGDRGPRRPREGVEGGAE
>NZ_CP015005.1|WP_018427106.1|4627592_4627841_+|30S-ribosomal-protein-S18
MVDINQIPTRRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAQAIKRARFLGLLPYVVK
>NZ_CP015005.1|WP_067964082.1|4628056_4628635_+|50S-ribosomal-protein-L9
MDVILLERISRLGQMGDTVKVKDGFARNFLLPKGKALRANEANKKKFEGQRAQLEARNLERKSEAQQVADKLDGKSFIIVRSAGETGQLYGSVSTRDIADLLIAEGFTVARNQVELNQPIKTIGLTNVAIALHAEVEVTITLNIARTADEAERQSKGETLTTAEAIYGDDINENARPDSFFDPNEDGEGDEG
>NZ_CP015005.1|WP_067964083.1|4628801_4630169_+|class-I-SAM-dependent-methyltransferase
MNMLLQRIVGKLVRTGNLTVTGPNGRSHRFGDDTGDPVHLLIKTRRAENAITLDPMLALPEAYMDGDVDIVGGDVLGLMRVVFQNLGNGSIDTAWTKALDNLRLAFRRFQQVNTTARAKRNVQRHYDLSGDLYRLFLDTDMQYSCAYFADPDMTLEEAQIAKKAHIAAKMRLRPGQSVLDIGSGWGGLGLYLARTFEAQVLGVTLSTEQHAVATERAQAEGLENRVHFEIRDYRDLVERFDRIVSVGMFEHVGVNHYRTFFDNVAKRLKPDGVMVLHSIGRAGPPASTSAFIRKHIFPGGYIPALSEVLPAIEKAGLMVTDVEILRLHYAETLRHWSLRFQANRDKAKAIYDERFCRMWEFYLAASEAAFRWQDLMVFQIQLSHRNDTLPLTRDYIGKCEKALAMHEMGHRQAKLAAEDKPAAQPAARAQPAAKAGAAQAEAGKIGRRRKVADKE
>NZ_CP015005.1|WP_067964085.1|4630270_4630594_+|YnfA-family-protein
MTYAIYVLAALAEIAGCFSFWAWWRLDKSALWLIPGVAALIAFGWLLALVDADAAGRTYAAYGGIYIAASLAWLWLAEGIRPDRWDMIGAAICILGASVILLAPRGA
>NZ_CP015005.1|WP_083948640.1|4630625_4632962_-|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MHVLRSAPARLVWLASTAMVVLASTEAGFAACDLTPTAGNSVYVCDSGASAGLTDTDGTNALTMPAGGTGTINGDVVFGNFRDVVTIHSGVINGAVNQSGGIDDFVMSGGVIGSLNQGSALDTATISGGHIIGEFFAGDFVTMTGGRIGNVNLEQANNEMRMSGGSVDTSIVAVQGNDLLEISGTAAVGTFINLGNGNNIFRWLGGGSIGGNVTMGTGQDTALLRGLTEASFAAGQLIDGGTSASIDTLTFEGTGSTSVARYVNWETVNLTQGSQFTLDGDLVLGDGQSNTGSLSIDASSTLRAGAGVNAAARAFTGGNAVMLTNAGTVDLTNGAASATDSFTVVGNYIGAGGYIRLDTVVSGDGAPSDRLVIEGGNASGSTGIIIVNLGGTGEQTDADGILVVETTSGGTTDAGAFTLASPVAYGAYEYLLFRGDAAGLGENWYLRSELVNPVDPSEPGIPLIRPETADYSVMPPMARDVALATLGTFHERRGEQGFLAGGDDLSVGWGRVFGSSSSQDWAGTVSPSADSTTLGIQAGLDLWRGETEAGARHAAGLFLGYASLNADIRGAVQGQADLAAGKLDLDAYSVGGYFTHVAAGGWYFDAVLMGSWLGGDAGSDRAIAIDADGRVVTASLEAGAPIALTASWMLEPQAQIIWQDVSLEDADDTLSGVRFDEGRGVTGRIGARLEGTFDTASGQLKPYLKANLWHGFDGEDVTYFDSDAIRVETGGTRLELGAGISHAFTDKVSAFAVADYSFNLGGERSRSFEGNIGLQVKW
>NZ_CP015005.1|WP_067964088.1|4633539_4635039_+|replicative-DNA-helicase
MAEAARKFEVAEATPLYREAPNNIEAEQALLGAILVNNDAFYRVSDFLKATHFYEPLHRKIFEVSAELIRMGKMANPVTLKTFLPADEKVGDMTVMQYLVALAANAVTVINASDYGRAVYDLATRRALITVGEDMVNIAYDAPVDMSPAEQIEDAERRLFELAETGRYDGGFESFSDAVKTAIDMASAAYMRDGHLSGVASGLHDLDARMGGLQSSDLIVLAGRPGMGKTSLVTNIAFNVAHAYVPAQQADGSFKAENGGVVGFFSLEMSSEQLATRIISEQAEVPSSKIRRGDLTEADFEKLVSCTQTLQKIPLFIDSTGGISIAQLAARARRLKRQRGLDLIIIDYIQLMQGSSAKASQNRVQEITEITTGLKALAKELNVPIIALSQLSRQVESRDDKRPQLSDLRESGSIEQDADVVIFVYREEYYLKNKEPKPGTDEYLQWEANMNDVRGKAEVIVAKQRHGPTGTVSLGFQGEFTRFFDLAPEHHLPDRFGEE
>NZ_CP015005.1|WP_067964089.1|4635280_4636684_+|DNA-repair-protein-RadA
MAKARVQFICQNCGAAHQRWAGKCDSCGEWNTLVEEGTAGGIGSGPGSLKSARKGRAVTLTSLDGDIEDAPRIVSGIGELDRATGGGFVRGSALLIGGDPGIGKSTLLTQAAAALAARGHRVVYVSGEEAVAQIRLRAQRLGVASTPVELAAETNVEDILATIADGKRPDLVIIDSIQTLWTDLADSAPGTVTQVRAASQAMIRYAKSTGAAVVLVGHVTKEGQIAGPRVVEHMVDGVLYFEGEGGHHFRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERHSKAPGAAVFAAIEGTRPVLVEIQALVAASSLGTPRRAVVGWDSSRLSMILAVLEAHCGVRFGQHDVYLNVAGGYRISEPAADLAVASALVSSLTGIALPADCVYFGEISLSGAVRPVAHAQQRLKEAEKLGFGRAVLPSGSGELAGGIGAGSFQPTALADLVARIAGSRRSRAEETD
>NZ_CP015005.1|WP_067964091.1|4636712_4637315_+|CvpA-family-protein
MPITLLDGILVGFTLVSAMLAMVRGFSREVLSVASWAAAAAAAFFFYKPVVPYVQPYIDNEKIAMAAAAGIVFIIALIVVTIITMKIADFIIDSRIGALDRTLGFLYGAARGILVVAVGLLFFNWLVGPNAPAWVAEAKSRPLLESIGTSIENLLPEDPENSILKKLNSQTGEPEAGATTPPAEAPAEGEAPAEPAPTNN
>NZ_CP015005.1|WP_067964093.1|4637396_4638866_+|amidophosphoribosyltransferase
MADAADVLSAEADDHFHDECGVFGIFGRQDAAAIVTLGLHALQHRGQEAAGIVSYDGSQFHVERHVGLIGDTFTKQRVIDSLKGNRAIGHTRYATTGGAGVRNIQPFFAELADGGFAVAHNGNLTNAMTVQRALQKQGSIFSSTSDTETILHLVATSKERDLNARFIDAVRQVEGAFSLVALSSKKMIGCRDPLGIRPLVLGDLDGAWILASETCALDIIGARFVRDLKPGEMVIVTSKGIESIFPFEPQKPRFCIFEYVYFARPDSSVEGRNVYDVRKRIGAELALESPVDADIVVPVPDSGTPAAIGFSQAAGLPFELGIIRNHYVGRTFISPGDSIRHMGVKLKHNANRRMIEGKRIVLVDDSIVRGTTSQKIVQMVRDAGAKEVHMRIASPPTRASCFYGVDTPEKSKLLASRMTIEEMAEFIRVDSLGFLSMNGLYRAVGEASRNDEQPQYCDACFSGQYPTRLLDLEGADNVRSLSLLATGGL

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	343128-343155	6	0.786
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	626118-626145	7	0.75
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	626127-626154	7	0.75
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	CP002294	Geobacillus sp. Y4.1MC1 plasmid pGY4MC101, complete sequence	7690-7717	7	0.75
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	648314-648341	7	0.75
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	621748-621775	7	0.75
NZ_CP015005_2	2.1\|4626744\|28\|NZ_CP015005\|CRISPRCasFinder	4626744-4626771	28	NC_015665	Parageobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH01, complete sequence	60353-60380	7	0.75

1. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 6, identity: 0.786

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
ggcacgaaatagggcgcgaaaagcccga	Protospacer
*   ****** ******.*********

2. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
gcatcgaactcgggcgcaacaaggtgct	Protospacer
******** ********** *** .  .

3. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
gcatcgaactcgggcgcaacaaggtgct	Protospacer
******** ********** *** .  .

4. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to CP002294 (Geobacillus sp. Y4.1MC1 plasmid pGY4MC101, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
cagacgacatcgggcgcaaaatgcccga	Protospacer
  . *** ************* *****

5. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
gcatcgaactcgggcgcaacaaggtgct	Protospacer
******** ********** *** .  .

6. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
gcatcgaactcgggcgcaacaaggtgct	Protospacer
******** ********** *** .  .

7. spacer 2.1|4626744|28|NZ_CP015005|CRISPRCasFinder matches to NC_015665 (Parageobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH01, complete sequence) position: , mismatch: 7, identity: 0.75

gcatcgaaatcgggcgcaaaaagcccgc	CRISPR spacer
cagacgacatcgggcgcaaaatgcccga	Protospacer
  . *** ************* *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2300353 : 2307439

Sinorhizobium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067958877.1\|2300353_2301220_+	hypothetical protein	C5IHN5	Burkholderia_virus	2.2e-30	40.4
WP_067958882.1\|2301887_2302121_-	hypothetical protein	NA	NA	NA	NA
WP_067958885.1\|2302179_2302566_-	DUF1515 family protein	A0A291AUW4	Sinorhizobium_phage	3.2e-13	40.4
WP_157097025.1\|2302570_2302822_-	hypothetical protein	NA	NA	NA	NA
WP_067958892.1\|2302866_2303088_-	hypothetical protein	NA	NA	NA	NA
WP_067958895.1\|2303074_2303443_-	hypothetical protein	NA	NA	NA	NA
WP_067958896.1\|2303439_2303706_-	hypothetical protein	L7TKX8	Rhizobium_phage	3.5e-11	53.3
WP_067958899.1\|2303708_2304065_-	ammonia monooxygenase	A0A291AUV3	Sinorhizobium_phage	1.2e-46	69.0
WP_067958902.1\|2304066_2304561_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	3.0e-40	55.2
WP_067958904.1\|2304587_2306360_-	hypothetical protein	NA	NA	NA	NA
WP_157097026.1\|2306442_2307036_+	hypothetical protein	A0A068CBG2	Acinetobacter_phage	2.5e-33	41.6
WP_067958910.1\|2307022_2307439_-	hypothetical protein	F8TV96	EBPR_siphovirus	1.1e-32	59.2

DBSCAN-SWA_2

2355794 : 2367309

Faustovirus(18.18%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067959078.1\|2355794_2356511_+	NADAR family protein	A0A1X7BZM3	Faustovirus	4.7e-18	35.1
WP_157097039.1\|2356518_2356749_-	hypothetical protein	NA	NA	NA	NA
WP_067959084.1\|2356741_2356948_+	hypothetical protein	NA	NA	NA	NA
WP_067959087.1\|2356940_2357309_+	hypothetical protein	NA	NA	NA	NA
WP_067959090.1\|2357308_2358112_+	3'-5' exonuclease	A0A1W5PTR6	Pseudoalteromonas_phage	5.5e-07	29.0
WP_067959092.1\|2358111_2358357_+	hypothetical protein	NA	NA	NA	NA
WP_067959095.1\|2358356_2358770_+	hypothetical protein	NA	NA	NA	NA
WP_067959097.1\|2358762_2359170_+	hypothetical protein	K4JS85	Caulobacter_phage	9.5e-16	38.7
WP_067959099.1\|2359169_2359550_+	hypothetical protein	A0A240F4V5	Ochrobactrum_phage	1.0e-27	57.3
WP_067959102.1\|2359549_2359771_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_067959105.1\|2359763_2360891_+	AAA family ATPase	A0A291LA07	Bordetella_phage	2.9e-107	55.1
WP_157097040.1\|2360890_2361043_+	hypothetical protein	NA	NA	NA	NA
WP_067959108.1\|2361042_2361462_+	hypothetical protein	NA	NA	NA	NA
WP_067959110.1\|2361440_2361710_+	hypothetical protein	NA	NA	NA	NA
WP_067959113.1\|2361703_2362219_+	NADAR family protein	A0A1X7BZM3	Faustovirus	2.8e-12	32.7
WP_157097041.1\|2362431_2362698_+	hypothetical protein	A0A076GCZ2	Sinorhizobium_phage	8.9e-23	64.0
WP_067966233.1\|2362690_2363716_+	phage Gp37/Gp68 family protein	A0A291AUR0	Sinorhizobium_phage	4.3e-105	53.3
WP_067959123.1\|2363715_2364369_+	hypothetical protein	A0A0U2BXG7	Paracoccus_phage	6.2e-25	36.8
WP_067966235.1\|2364368_2364698_+	hypothetical protein	A0A223W046	Agrobacterium_phage	1.2e-13	43.0
WP_067959129.1\|2365032_2365545_+	hypothetical protein	NA	NA	NA	NA
WP_157097204.1\|2366562_2367309_+	recombinase zinc beta ribbon domain-containing protein	R9TP69	Rhizobium_phage	8.6e-31	36.2

DBSCAN-SWA_3

3407549 : 3420490

uncultured_Mediterranean_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067961616.1\|3407549_3408350_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.4e-31	30.2
WP_067961618.1\|3408346_3409081_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.0e-41	44.5
WP_067966474.1\|3409120_3410224_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.9e-11	35.1
WP_067961619.1\|3410259_3410478_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	1.7e-08	70.5
WP_067961621.1\|3410510_3411215_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_067961623.1\|3411211_3412102_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.8e-49	43.9
WP_067961625.1\|3412157_3413462_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.4e-105	56.5
WP_067961627.1\|3413463_3414222_+	5'/3'-nucleotidase SurE	NA	NA	NA	NA
WP_154384054.1\|3414218_3414872_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.9e-18	37.3
WP_067961631.1\|3415050_3416352_+	M23 family metallopeptidase	I3PV24	Clostridium_phage	3.0e-15	35.6
WP_067961633.1\|3416488_3417361_-	ATP-binding protein	NA	NA	NA	NA
WP_067961635.1\|3417542_3417884_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.3e-10	36.6
WP_067961636.1\|3417934_3420490_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.8e-65	52.8

DBSCAN-SWA_4

3811877 : 3820734

uncultured_Mediterranean_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067962234.1\|3811877_3813125_+	DNA polymerase IV	A0A1W6JNT0	Morganella_phage	2.3e-20	30.4
WP_067962236.1\|3813135_3814272_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-101	53.5
WP_067962238.1\|3814268_3815345_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_067962240.1\|3815344_3815794_-	DMT family transporter	NA	NA	NA	NA
WP_067962242.1\|3815800_3816316_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	5.3e-48	60.9
WP_067962244.1\|3816343_3816931_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.1e-41	55.9
WP_067962246.1\|3816951_3817452_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	8.1e-25	37.3
WP_165915867.1\|3817659_3817812_+	hypothetical protein	NA	NA	NA	NA
WP_067962248.1\|3817923_3820734_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.9e-95	30.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015009

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015005

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection