Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010839 Bordetella pertussis strain H378 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 33 0

Results visualization

1. NZ_CP010839
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010839_1 644869-644978 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010839_2 2930562-2930678 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010839_3 3645438-3645531 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010839_4 3826888-3826972 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 232665 : 307009 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489371 : 607266 102 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_4 611680 : 675513 47 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_5 694424 : 771732 56 Bacillus_phage(20.0%) protease,transposase,tRNA,integrase attL 741560:741578|attR 761448:761466
DBSCAN-SWA_6 1018714 : 1120058 92 Bacillus_virus(27.27%) transposase,tRNA NA
DBSCAN-SWA_7 1150444 : 1221414 51 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_8 1262485 : 1344620 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_9 1348731 : 1389396 41 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_10 1469073 : 1521226 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_11 1565151 : 1633236 59 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_12 1669185 : 1724776 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_13 1746434 : 1838405 60 Moraxella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1958590 : 2028242 55 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_15 2039738 : 2089134 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2100338 : 2141029 37 Klosneuvirus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_17 2168812 : 2225097 51 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_18 2228204 : 2282474 47 Klosneuvirus(15.38%) transposase,tRNA NA
DBSCAN-SWA_19 2321587 : 2385165 48 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_20 2530105 : 2588348 52 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_21 2630628 : 2697128 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2895467 : 2968792 52 Catovirus(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_23 2980517 : 3030236 43 uncultured_Mediterranean_phage(60.0%) transposase,holin,tRNA NA
DBSCAN-SWA_24 3038446 : 3100601 46 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_25 3120023 : 3175153 48 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_26 3190738 : 3262751 60 Leptospira_phage(20.0%) transposase,holin NA
DBSCAN-SWA_27 3314344 : 3357250 33 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_28 3366542 : 3399225 41 uncultured_Caudovirales_phage(21.05%) tail,transposase,tRNA,terminase NA
DBSCAN-SWA_29 3410444 : 3456763 44 Bacillus_phage(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_30 3601442 : 3656416 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_31 3746229 : 3811989 60 Bacillus_phage(20.0%) protease,transposase NA
DBSCAN-SWA_32 3821329 : 3883157 52 uncultured_Caudovirales_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_33 4029705 : 4083137 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage