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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010840 Bordetella pertussis strain H379 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 27 0

Results visualization

1. NZ_CP010840
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010840_1 251638-251722 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010840_2 625046-625155 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010840_3 1839949-1840076 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010840_4 2908643-2908759 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010840_5 3623413-3623506 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 71085 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 78683 : 137157 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 165940 : 226451 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 234383 : 287971 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 556356 : 615656 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_6 621811 : 675552 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 724490 : 764440 30 Pseudomonas_phage(33.33%) integrase,transposase,tRNA,protease attL 721738:721756|attR 741626:741644
DBSCAN-SWA_8 774367 : 821985 47 Bovine_alphaherpesvirus(10.0%) transposase,tRNA,holin,protease NA
DBSCAN-SWA_9 1006200 : 1100237 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130622 : 1201594 53 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_11 1242665 : 1324800 60 Bacillus_virus(25.0%) transposase,tRNA NA
DBSCAN-SWA_12 1328911 : 1369580 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1742159 : 1799437 49 Klosneuvirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_14 1851735 : 1911005 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_15 1921245 : 1965568 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_16 1982894 : 2053035 60 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_17 2247226 : 2308574 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_18 2329365 : 2400519 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2496346 : 2555127 50 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2607662 : 2674162 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2873548 : 2946873 53 Catovirus(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_22 2958598 : 3008211 42 uncultured_Mediterranean_phage(50.0%) transposase,tRNA,holin NA
DBSCAN-SWA_23 3029162 : 3101655 57 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3115162 : 3169729 45 Bacillus_phage(33.33%) transposase,holin NA
DBSCAN-SWA_25 3234187 : 3307349 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3318636 : 3418749 108 uncultured_Caudovirales_phage(14.29%) terminase,tail,protease,transposase,tRNA NA
DBSCAN-SWA_27 3768350 : 3839338 54 Staphylococcus_phage(15.38%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage