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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010845 Bordetella pertussis strain H561 chromosome, complete genome 5 crisprs cas3,DinG,csa3,DEDDh 0 0 29 0

Results visualization

1. NZ_CP010845
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010845_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010845_2 479402-479495 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010845_3 1043719-1043813 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010845_4 1939097-1939224 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010845_5 3446474-3446583 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 265572 : 397543 114 Klosneuvirus(10.71%) integrase,transposase,tRNA attL 308244:308261|attR 352884:352901
DBSCAN-SWA_5 637788 : 698978 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 704302 : 750493 51 uncultured_Caudovirales_phage(18.18%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_7 756659 : 810589 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 901467 : 950731 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_9 960343 : 1025283 58 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_10 1044683 : 1107834 54 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_11 1113818 : 1172838 49 uncultured_Mediterranean_phage(37.5%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_12 1364275 : 1432762 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1493253 : 1548741 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_14 1841306 : 1889321 42 Moraxella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_15 1950883 : 2010153 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_16 2020393 : 2080895 59 Staphylococcus_phage(14.29%) transposase NA
DBSCAN-SWA_17 2342179 : 2403527 52 Yellowstone_lake_phycodnavirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_18 2424318 : 2495472 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2579671 : 2641965 55 Salmonella_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_20 2728082 : 2768751 42 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2824216 : 2897086 58 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2900229 : 2967040 50 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_23 2997425 : 3037663 39 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3396076 : 3449817 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3455972 : 3515272 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_26 3530210 : 3588283 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_27 3598083 : 3669424 59 Paramecium_bursaria_Chlorella_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_28 3739246 : 3793441 54 Paramecium_bursaria_Chlorella_virus(14.29%) transposase,protease NA
DBSCAN-SWA_29 3995179 : 4048609 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage