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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010253 Bordetella pertussis strain I472 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG 0 0 27 0

Results visualization

1. NZ_CP010253
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010253_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010253_2 624002-624111 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010253_3 1843104-1843231 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010253_4 2910762-2910878 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010253_5 3627630-3627723 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233336 : 286926 46 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 555312 : 614612 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 620767 : 674508 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723446 : 764447 29 Mycobacterium_phage(50.0%) tRNA,protease,transposase NA
DBSCAN-SWA_8 774374 : 821992 47 Bovine_alphaherpesvirus(10.0%) tRNA,holin,protease,transposase NA
DBSCAN-SWA_9 1006207 : 1100244 87 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1130630 : 1201601 53 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1242672 : 1324807 60 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1328918 : 1370636 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1745313 : 1793328 42 Moraxella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_14 1854890 : 1914160 51 Klosneuvirus(40.0%) tRNA,protease,transposase NA
DBSCAN-SWA_15 1924400 : 1981897 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_16 1997453 : 2061822 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2248290 : 2309638 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2330429 : 2401583 55 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2497412 : 2556193 50 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2609779 : 2676279 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2880391 : 2961668 60 Planktothrix_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2970736 : 3020723 46 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_23 3032330 : 3104824 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3118331 : 3171849 44 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_25 3236307 : 3306359 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3309567 : 3414918 109 uncultured_Caudovirales_phage(14.29%) protease,terminase,tRNA,transposase,tail NA
DBSCAN-SWA_27 4032774 : 4075632 36 Planktothrix_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage